Cand2 (cullin-associated and neddylation-dissociated 2 (putative)) - Rat Genome Database

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Gene: Cand2 (cullin-associated and neddylation-dissociated 2 (putative)) Mus musculus
Analyze
Symbol: Cand2
Name: cullin-associated and neddylation-dissociated 2 (putative)
RGD ID: 1551563
MGI Page MGI
Description: Enables TBP-class protein binding activity. Predicted to be involved in SCF complex assembly and protein ubiquitination. Located in nucleus. Is expressed in several structures, including limb bud; musculature; and nervous system. Orthologous to human CAND2 (cullin associated and neddylation dissociated 2 (putative)).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2210404G23Rik; cullin-associated and neddylation-dissociated protein 2; cullin-associated NEDD8-dissociated protein 2; mKIAA0667; p120 CAND2; TBP-interacting protein 120B; TBP-interacting protein b; TBP-interacting protein of 120 kDa B; Tp120; Tp120b
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396115,751,518 - 115,782,516 (+)NCBIGRCm39mm39
GRCm39 Ensembl6115,751,499 - 115,782,518 (+)Ensembl
GRCm386115,774,557 - 115,805,555 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6115,774,538 - 115,805,557 (+)EnsemblGRCm38mm10GRCm38
MGSCv376115,724,575 - 115,755,573 (+)NCBIGRCm37mm9NCBIm37
MGSCv366115,740,194 - 115,770,488 (+)NCBImm8
Celera6117,614,220 - 117,645,199 (+)NCBICelera
Cytogenetic Map6E3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (ISO)
nucleus  (IBA,IDA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. TIP120B: a novel TIP120-family protein that is expressed specifically in muscle tissues. Aoki T, etal., Biochem Biophys Res Commun 1999 Aug 11;261(3):911-6.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Transcriptome clarifies mechanisms of lesion genesis versus progression in models of Ccm3 cerebral cavernous malformations. Koskimäki J, etal., Acta Neuropathol Commun. 2019 Aug 19;7(1):132. doi: 10.1186/s40478-019-0789-0.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80.
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Genomic Variants in NEURL, GJA1 and CUX2 Significantly Increase Genetic Susceptibility to Atrial Fibrillation. Wang P, etal., Sci Rep. 2018 Feb 19;8(1):3297. doi: 10.1038/s41598-018-21611-7.
10. NEURL rs6584555 and CAND2 rs4642101 contribute to postoperative atrial fibrillation: a prospective study among Chinese population. Wei T, etal., Oncotarget. 2016 Jul 5;7(27):42617-42624. doi: 10.18632/oncotarget.9422.
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12207886   PMID:12477932   PMID:12520002   PMID:15489334   PMID:15747579   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:17242400   PMID:18799693   PMID:19799774   PMID:21267068   PMID:21565611   PMID:21677750   PMID:21873635   PMID:22673621   PMID:24457600   PMID:26365490   PMID:28378742  
PMID:29717274   PMID:32325033  


Genomics

Comparative Map Data
Cand2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396115,751,518 - 115,782,516 (+)NCBIGRCm39mm39
GRCm39 Ensembl6115,751,499 - 115,782,518 (+)Ensembl
GRCm386115,774,557 - 115,805,555 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6115,774,538 - 115,805,557 (+)EnsemblGRCm38mm10GRCm38
MGSCv376115,724,575 - 115,755,573 (+)NCBIGRCm37mm9NCBIm37
MGSCv366115,740,194 - 115,770,488 (+)NCBImm8
Celera6117,614,220 - 117,645,199 (+)NCBICelera
Cytogenetic Map6E3NCBI
CAND2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38312,796,680 - 12,834,803 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl312,796,472 - 12,834,804 (+)EnsemblGRCh38hg38GRCh38
GRCh37312,838,179 - 12,876,302 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36312,813,171 - 12,851,301 (+)NCBINCBI36hg18NCBI36
Celera312,776,461 - 12,814,604 (+)NCBI
Cytogenetic Map3p25.2NCBI
HuRef312,772,260 - 12,810,226 (+)NCBIHuRef
CHM1_1312,788,141 - 12,826,306 (+)NCBICHM1_1
T2T-CHM13v2.0312,798,170 - 12,836,312 (+)NCBI
Cand2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24148,835,050 - 148,864,039 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl4148,835,053 - 148,863,153 (+)Ensembl
Rnor_6.04147,686,487 - 147,714,593 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4147,686,490 - 147,714,585 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04210,970,266 - 210,998,152 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44151,912,174 - 151,940,734 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14152,157,014 - 152,185,575 (+)NCBI
Celera4137,725,100 - 137,753,194 (+)NCBICelera
Cytogenetic Map4q42NCBI
Cand2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542917,891,796 - 17,913,866 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542917,891,306 - 17,913,961 (-)NCBIChiLan1.0ChiLan1.0
CAND2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1313,066,133 - 13,102,246 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl313,066,135 - 13,102,246 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0312,722,259 - 12,757,983 (+)NCBIMhudiblu_PPA_v0panPan3
CAND2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1205,756,576 - 5,789,892 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl205,757,566 - 5,811,408 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha205,793,865 - 5,827,176 (-)NCBI
ROS_Cfam_1.0205,786,186 - 5,819,576 (-)NCBI
ROS_Cfam_1.0 Ensembl205,787,164 - 5,820,601 (-)Ensembl
UMICH_Zoey_3.1205,502,290 - 5,535,612 (-)NCBI
UNSW_CanFamBas_1.0205,855,197 - 5,888,510 (-)NCBI
UU_Cfam_GSD_1.0205,830,851 - 5,864,169 (-)NCBI
Cand2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494217,900,816 - 17,922,373 (+)NCBI
SpeTri2.0NW_004936602987,292 - 1,008,825 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAND2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1368,758,734 - 68,787,192 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11368,758,739 - 68,787,200 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21376,028,327 - 76,057,637 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CAND2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12248,771,419 - 48,809,911 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2248,771,987 - 48,809,093 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041117,679,110 - 117,717,259 (-)NCBIVero_WHO_p1.0
Cand2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624872404,495 - 429,322 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_004624872404,263 - 429,866 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
D5Mit392.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7A3UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map6F1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic MapXF5UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic MapXF3UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map15A1UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map13A3.1UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map2E1UniSTS
cM Map528.0UniSTS
Whitehead Genetic518.6UniSTS
UniSTS:235528  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386115,803,841 - 115,804,019UniSTSGRCm38
MGSCv376115,753,859 - 115,754,037UniSTSGRCm37
Celera6117,643,494 - 117,643,672UniSTS
Cytogenetic Map6F1UniSTS
RH135165  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386115,803,633 - 115,803,817UniSTSGRCm38
MGSCv376115,753,651 - 115,753,835UniSTSGRCm37
Celera6117,643,286 - 117,643,470UniSTS
Cytogenetic Map6F1UniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652138693116132228Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678606487121092347Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684099474118099474Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687480321121480516Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined688982366122982564Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690772571124772807Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined694981612128981699Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696324286130324483Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696324286130324483Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698219814132219938Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698694477132694676Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698908709132916997Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699132089133132228Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103754405136400690Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104480321127019938Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104480321136400690Mouse
4141699Ibdq2_minflammatory bowel disease QTL 2 (mouse)Not determined105982366120894102Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110815180144815323Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111142448145142541Mouse
10043891Tilss4_mTNF-induced lethal shock susceptibility 3 (mouse)Not determined6112246918125333748Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
8552704Cia43_mcollagen induced arthritis QTL 43 (mouse)Not determined6114159241119737532Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
1301083Bhr5_mbronchial hyperresponsiveness 5 (mouse)Not determined6115694477132578150Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:385
Count of miRNA genes:276
Interacting mature miRNAs:319
Transcripts:ENSMUST00000075995
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_025958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC109169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP761509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY553771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ299742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000075995   ⟹   ENSMUSP00000075377
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6115,751,499 - 115,782,518 (+)Ensembl
GRCm38.p6 Ensembl6115,774,538 - 115,805,557 (+)Ensembl
RefSeq Acc Id: NM_025958   ⟹   NP_080234
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396115,751,518 - 115,782,516 (+)NCBI
GRCm386115,774,557 - 115,805,555 (+)ENTREZGENE
MGSCv376115,724,575 - 115,755,573 (+)RGD
Celera6117,614,220 - 117,645,199 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030255552   ⟹   XP_030111412
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396115,751,534 - 115,781,361 (+)NCBI
GRCm386115,774,573 - 115,804,497 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_080234   ⟸   NM_025958
- UniProtKB: Q6ZQ73 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030111412   ⟸   XM_030255552
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000075377   ⟸   ENSMUST00000075995
Protein Domains
TIP120

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6ZQ73-F1-model_v2 AlphaFold Q6ZQ73 1-1235 view protein structure

Promoters
RGD ID:6847980
Promoter ID:MM_ACW:42420
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung,   Spleen
Transcripts:CAND2.BSEP07-UNSPLICED,   CAND2.DSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366115,742,291 - 115,743,092 (+)MPROMDB
RGD ID:6890732
Promoter ID:EPDNEW_M8817
Type:initiation region
Name:Cand2_1
Description:Mus musculus cullin-associated and neddylation-dissociated 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386115,774,573 - 115,774,633EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914338 AgrOrtholog
Ensembl Genes ENSMUSG00000030319 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000075377 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000075995 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CAND1/CAND2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HEAT UniProtKB/TrEMBL
  TATA-bd_TIP120 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67088 UniProtKB/Swiss-Prot
MGD MGI:1914338 ENTREZGENE
NCBI Gene 67088 ENTREZGENE
PANTHER PTHR12696 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HEAT UniProtKB/TrEMBL
  TIP120 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cand2 PhenoGen
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt CAND2_MOUSE UniProtKB/Swiss-Prot
  Q3TD19_MOUSE UniProtKB/TrEMBL
  Q3UM57_MOUSE UniProtKB/TrEMBL
  Q6ZQ73 ENTREZGENE
  Q9CSM7_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q6PHT7 UniProtKB/Swiss-Prot