Rad51ap1 (RAD51 associated protein 1) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Rad51ap1 (RAD51 associated protein 1) Mus musculus
Analyze
Symbol: Rad51ap1
Name: RAD51 associated protein 1
RGD ID: 1315620
Description: Predicted to have RNA binding activity; double-stranded DNA binding activity; and single-stranded DNA binding activity. Involved in DNA recombination. Localizes to nucleus. Is expressed in brain ventricular layer and early conceptus. Orthologous to human RAD51AP1 (RAD51 associated protein 1); INTERACTS WITH (2E,4E)-hexa-2,4-dienoic acid; 1,2-dimethylhydrazine; 1,4-dioxane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2510006L10Rik; RAB; RAB22; RAD51-associated protein 1; RAD51-interacting protein
Orthologs:
Homo sapiens (human) : RAD51AP1 (RAD51 associated protein 1)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Rad51ap1 (RAD51 associated protein 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rad51ap1 (RAD51 associated protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RAD51AP1 (RAD51 associated protein 1)
Canis lupus familiaris (dog) : RAD51AP1 (RAD51 associated protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rad51ap1 (RAD51 associated protein 1)
Sus scrofa (pig) : RAD51AP1 (RAD51 associated protein 1)
Chlorocebus sabaeus (African green monkey) : RAD51AP1 (RAD51 associated protein 1)
Heterocephalus glaber (naked mole-rat) : Rad51ap1 (RAD51 associated protein 1)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396126,900,378 - 126,916,664 (-)NCBI
GRCm386126,923,415 - 126,939,621 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6126,923,050 - 126,939,587 (-)EnsemblGRCm38mm10GRCm38
MGSCv376126,873,437 - 126,889,573 (-)NCBIGRCm37mm9NCBIm37
MGSCv366126,889,705 - 126,905,168 (-)NCBImm8
Celera6128,597,764 - 128,618,928 (-)NCBICelera
Cytogenetic Map6F3NCBI
cM Map661.92NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(2E,4E)-hexa-2,4-dienoic acid  (EXP)
1,2-dimethylhydrazine  (EXP)
1,4-dioxane  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (EXP)
2,6-di-tert-butyl-4-methylphenol  (EXP)
2-butoxyethanol  (EXP)
3-methylcholanthrene  (EXP)
4-hydroxyphenyl retinamide  (EXP)
7,12-dimethyltetraphene  (EXP)
8'-apo-beta,psi-caroten-8'-al  (ISO)
acetamide  (ISO)
acrylamide  (EXP,ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (EXP)
anthracene-1,8,9-triol  (EXP)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
beta-carotene  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
buta-1,3-diene  (EXP)
butylated hydroxyanisole  (EXP)
cadmium dichloride  (ISO)
caffeine  (EXP)
calcitriol  (ISO)
carbon nanotube  (EXP)
choline  (EXP)
cisplatin  (EXP,ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dioxygen  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
ethyl methanesulfonate  (ISO)
folic acid  (EXP)
furan  (ISO)
genistein  (ISO)
imiquimod  (EXP)
iron dichloride  (EXP)
iron trichloride  (EXP)
L-methionine  (EXP)
lucanthone  (ISO)
MeIQx  (ISO)
methamphetamine  (ISO)
methyl methanesulfonate  (ISO)
Mezerein  (EXP)
N-nitrosodiethylamine  (EXP)
N-Nitrosopyrrolidine  (ISO)
nickel atom  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
palbociclib  (ISO)
palytoxin  (EXP)
paracetamol  (EXP,ISO)
phenacetin  (EXP)
phenobarbital  (EXP)
phorbol 13-acetate 12-myristate  (EXP,ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
progesterone  (EXP)
propanal  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sodium nitrite  (EXP)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tamoxifen  (EXP)
testosterone  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
topotecan  (ISO)
trichloroethene  (EXP)
triclosan  (ISO)
trimellitic anhydride  (EXP)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (ISO)
zinc dichloride  (EXP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. MGD data from the GO Consortium
2. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9192668   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11773082   PMID:11856727   PMID:12466851   PMID:12477932   PMID:12578829   PMID:12904583  
PMID:14610273   PMID:15282163   PMID:15489334   PMID:15741177   PMID:16141072   PMID:16141073   PMID:18799693   PMID:21267068   PMID:21307306   PMID:21677750   PMID:21731673   PMID:21873635  
PMID:23271971   PMID:32665355  


Genomics

Comparative Map Data
Rad51ap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396126,900,378 - 126,916,664 (-)NCBI
GRCm386126,923,415 - 126,939,621 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6126,923,050 - 126,939,587 (-)EnsemblGRCm38mm10GRCm38
MGSCv376126,873,437 - 126,889,573 (-)NCBIGRCm37mm9NCBIm37
MGSCv366126,889,705 - 126,905,168 (-)NCBImm8
Celera6128,597,764 - 128,618,928 (-)NCBICelera
Cytogenetic Map6F3NCBI
cM Map661.92NCBI
RAD51AP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl124,538,798 - 4,560,048 (+)EnsemblGRCh38hg38GRCh38
GRCh38124,538,890 - 4,560,047 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37124,647,940 - 4,669,213 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36124,518,317 - 4,539,475 (+)NCBINCBI36hg18NCBI36
Build 34124,518,316 - 4,539,475NCBI
Celera126,269,995 - 6,291,258 (+)NCBI
Cytogenetic Map12p13.32NCBI
HuRef124,504,635 - 4,525,896 (+)NCBIHuRef
CHM1_1124,647,572 - 4,668,835 (+)NCBICHM1_1
Rad51ap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04159,469,803 - 159,482,869 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4159,469,804 - 159,482,869 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04232,130,924 - 232,143,990 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44163,308,788 - 163,321,854 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4148,475,373 - 148,488,439 (-)NCBICelera
Cytogenetic Map4q42NCBI
Rad51ap1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554132,334,911 - 2,361,806 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554132,335,431 - 2,362,781 (+)NCBIChiLan1.0ChiLan1.0
RAD51AP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1124,578,621 - 4,599,879 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl124,578,621 - 4,599,879 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0124,657,972 - 4,679,232 (+)NCBIMhudiblu_PPA_v0panPan3
RAD51AP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2740,303,992 - 40,341,526 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12740,303,935 - 40,341,666 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Rad51ap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366064,697,369 - 4,716,006 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAD51AP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl565,872,281 - 65,897,215 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1565,872,277 - 65,897,210 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2568,078,180 - 68,103,126 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RAD51AP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl114,560,175 - 4,581,142 (+)Ensembl
ChlSab1.1114,560,107 - 4,582,357 (+)NCBI
Rad51ap1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248601,627,606 - 1,643,569 (+)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698242853132242977Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698506837145935444Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698717516132717715Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698931748132940036Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699155128133155267Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103777444136423692Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104503360127042975Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104503360136423692Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110838217144838360Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111165485145165578Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112269957147052561Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114368732145656013Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115242853146429238Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115569842149572401Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115569842149572401Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115569842149572401Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115601042149601187Mouse
1301083Bhr5_mbronchial hyperresponsiveness 5 (mouse)Not determined6115717516132601187Mouse
4141064Ath37_matherosclerosis 37 (mouse)Not determined6116664897128519025Mouse
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116852888149736546Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117082986149736546Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120439808149736546Mouse
10449436Pas17_mpulmonary adenoma susceptibility 17 (mouse)6124357314145656013Mouse
1302089Wta2_mweight adult 2 (mouse)Not determined6125323797149736546Mouse
4141611Btts_mbitterness tasting (mouse)Not determined6125356646134119623Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2345
Count of miRNA genes:637
Interacting mature miRNAs:775
Transcripts:ENSMUST00000112220, ENSMUST00000112221, ENSMUST00000123837, ENSMUST00000141212, ENSMUST00000144954
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001347455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC165085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW457762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB620338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U93583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000112220   ⟹   ENSMUSP00000107839
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,923,050 - 126,939,587 (-)Ensembl
RefSeq Acc Id: ENSMUST00000112221   ⟹   ENSMUSP00000107841
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,923,415 - 126,939,587 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123837
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,926,378 - 126,928,108 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,928,678 - 126,939,587 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144954   ⟹   ENSMUSP00000122978
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,926,362 - 126,939,571 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201102
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,923,415 - 126,925,829 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201760
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,924,178 - 126,925,735 (-)Ensembl
RefSeq Acc Id: ENSMUST00000202191
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,924,989 - 126,928,270 (-)Ensembl
RefSeq Acc Id: ENSMUST00000202835
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,927,645 - 126,939,546 (-)Ensembl
RefSeq Acc Id: ENSMUST00000202897   ⟹   ENSMUSP00000144327
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6126,928,107 - 126,939,575 (-)Ensembl
RefSeq Acc Id: NM_001347455   ⟹   NP_001334384
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396126,900,378 - 126,916,550 (-)NCBI
GRCm386126,923,415 - 126,939,587 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009013   ⟹   NP_033039
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396126,900,378 - 126,916,550 (-)NCBI
GRCm386126,923,415 - 126,939,587 (-)NCBI
MGSCv376126,873,437 - 126,889,573 (-)RGD
Celera6128,597,764 - 128,618,928 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030255239   ⟹   XP_030111099
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396126,900,378 - 126,916,577 (-)NCBI
GRCm386126,923,415 - 126,939,614 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255240   ⟹   XP_030111100
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396126,900,378 - 126,907,045 (-)NCBI
GRCm386126,923,415 - 126,930,082 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004942924
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396126,900,378 - 126,916,664 (-)NCBI
RefSeq Acc Id: XR_377433
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396126,900,378 - 126,916,584 (-)NCBI
GRCm386126,923,415 - 126,939,621 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033039   ⟸   NM_009013
- Peptide Label: isoform 1
- UniProtKB: Q8C551 (UniProtKB/Swiss-Prot),   A0A0R4J1G4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030111099   ⟸   XM_030255239
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001334384   ⟸   NM_001347455
- Peptide Label: isoform 2
- UniProtKB: Q8C551 (UniProtKB/Swiss-Prot),   A0A0R4J1H1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030111100   ⟸   XM_030255240
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000122978   ⟸   ENSMUST00000144954
RefSeq Acc Id: ENSMUSP00000144327   ⟸   ENSMUST00000202897
RefSeq Acc Id: ENSMUSP00000107841   ⟸   ENSMUST00000112221
RefSeq Acc Id: ENSMUSP00000107839   ⟸   ENSMUST00000112220
Protein Domains
RAD51_interact

Promoters
RGD ID:6839160
Promoter ID:MM_KWN:47682
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000032496,   ENSMUST00000112220,   ENSMUST00000112221,   NM_138594,   OTTMUST00000058979,   OTTMUST00000059020,   UC009DVL.1,   UC009DVM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366126,889,476 - 126,890,147 (+)MPROMDB
RGD ID:6891094
Promoter ID:EPDNEW_M8998
Type:initiation region
Name:Rad51ap1_1
Description:Mus musculus RAD51 associated protein 1 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386126,939,557 - 126,939,617EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1098224 AgrOrtholog
Ensembl Genes ENSMUSG00000030346 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000107839 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000107841 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000122978 UniProtKB/TrEMBL
  ENSMUSP00000144327 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000112220 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000112221 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000144954 UniProtKB/TrEMBL
  ENSMUST00000202897 UniProtKB/TrEMBL
InterPro RAD51-assoc_prot_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAD51_interact UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19362 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1098224 ENTREZGENE
NCBI Gene 19362 ENTREZGENE
PANTHER PTHR15361:SF4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam RAD51_interact UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rad51ap1 PhenoGen
UniGene Mm.204634 ENTREZGENE
UniProt A0A0J9YUS9_MOUSE UniProtKB/TrEMBL
  A0A0R4J1G4 ENTREZGENE, UniProtKB/TrEMBL
  A0A0R4J1H1 ENTREZGENE, UniProtKB/TrEMBL
  D3Z7I5_MOUSE UniProtKB/TrEMBL
  Q8C551 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary O55219 UniProtKB/Swiss-Prot
  Q8BP36 UniProtKB/Swiss-Prot
  Q99L94 UniProtKB/Swiss-Prot
  Q9D0J0 UniProtKB/Swiss-Prot