Gm24592 (predicted gene, 24592) - Rat Genome Database

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Gene: Gm24592 (predicted gene, 24592) Mus musculus
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Symbol: Gm24592
Name: predicted gene, 24592
RGD ID: 15002048
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396120,357,995 - 120,358,100 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6120,357,995 - 120,358,100 (-)EnsemblGRCm39 Ensembl
GRCm386120,381,034 - 120,381,139 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6120,381,034 - 120,381,139 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map6F1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm24592
6 total Variants

Predicted Target Of
Summary Value
Count of predictions:57
Count of miRNA genes:55
Interacting mature miRNAs:56
Transcripts:ENSMUST00000122505
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 42 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103754405136400690Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698908709132916997Mouse
1301083Bhr5_mbronchial hyperresponsiveness 5 (mouse)Not determined6115694477132578150Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698219814132219938Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse

1 to 10 of 42 rows





RefSeq Transcripts XR_004933977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC155720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000122505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6120,357,995 - 120,358,100 (-)Ensembl
GRCm38.p6 Ensembl6120,381,034 - 120,381,139 (-)Ensembl
RefSeq Acc Id: XR_004933977
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396120,357,995 - 120,358,100 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000084454 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000122505 ENTREZGENE
MGD MGI:5454369 ENTREZGENE
NCBI Gene Gm24592 ENTREZGENE
PhenoGen Gm24592 PhenoGen
RNAcentral URS0000634F34 RNACentral