ONTOLOGY REPORT - ANNOTATIONS
Term: positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
Accession: GO:0002824
browse the term
Definition: Any process that activates or increases the frequency, rate, or extent of an adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. An example of this process is found in the Gnathostomata.
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Cd4
Cd4 molecule
involved_in
ISO
(PMID:1832488)
RGD
PMID:1832488
NCBI chr 4:157,668,878...157,695,366
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RT1-A2
RT1 class Ia, locus A2
involved_in
ISO
(PMID:30134159)
RGD
PMID:30134159
NCBI chr20:4,870,939...4,910,183
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(PMID:30548312)
RGD
PMID:30548312
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117|MGI:2683027 (PMID:14607964)
Ensembl RGD
PMID:14607964
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
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RT1-DMa
RT1 class II, locus DMa
involved_in
ISO
(PMID:11714799)
RGD
PMID:11714799
NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
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Tnfrsf13c
TNF receptor superfamily member 13C
acts_upstream_of_or_within
ISO
MGI:2389403 (PMID:14557413)
RGD
PMID:14557413
NCBI chr 7:113,736,046...113,738,523
Ensembl chr 7:113,736,055...113,738,517
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Tnfsf13
TNF superfamily member 13
acts_upstream_of_or_within
ISO
MGI:3038886 (PMID:14988498)
RGD
PMID:14988498
NCBI chr10:54,400,054...54,403,723
Ensembl chr10:54,400,065...54,403,042
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Tnfsf13b
TNF superfamily member 13b
acts_upstream_of_or_within
ISO
MGI:2387426 (PMID:14557413)
RGD
PMID:14557413
NCBI chr16:79,462,406...79,492,888
Ensembl chr16:79,462,402...79,492,693
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Fcer2
Fc epsilon receptor II
acts_upstream_of_or_within
ISO
MGI:3583003 (PMID:8041705)
RGD
PMID:8041705
NCBI chr12:1,742,809...1,754,476
Ensembl chr12:1,742,815...1,754,476
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Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:11934565
RGD:2303774
NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086
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Hpx
hemopexin
acts_upstream_of_or_within
ISO
MGI:2447193 (PMID:18641331)
RGD
PMID:18641331
NCBI chr 1:159,932,819...159,940,327
Ensembl chr 1:159,932,755...159,940,328
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Lta
lymphotoxin alpha
acts_upstream_of_or_within
ISO
MGI:104798 (PMID:9834074)
RGD
PMID:9834074
NCBI chr20:3,618,853...3,621,324
Ensembl chr20:3,618,853...3,620,859
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Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:3529594 (PMID:15692051)
RGD
PMID:15692051
NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
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Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (PMID:8566034)
RGD
PMID:8566034
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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Tnf
tumor necrosis factor
acts_upstream_of_or_within
ISO
MGI:104797 (PMID:9834074)
RGD
PMID:9834074
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Cd226
CD226 molecule
involved_in
ISO IBA
(PMID:16831868) GO_REF:0000033
RGD GO_Central
PMID:16831868
GO_REF:0000033
NCBI chr18:82,449,924...82,545,107
Ensembl chr18:82,450,568...82,543,051
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Nectin2
nectin cell adhesion molecule 2
involved_in
ISO IBA
(PMID:16831868) GO_REF:0000033
RGD GO_Central
PMID:16831868
GO_REF:0000033
NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:12496423)
RGD
PMID:12496423
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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C10h17orf99
smilar to human chromosome 17 open reading frame 99
involved_in
ISO
(PMID:28978694)
RGD
PMID:28978694
NCBI chr10:103,015,371...103,027,407
Ensembl chr10:103,016,505...103,027,407
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Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107
NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:12496423)
RGD
PMID:12496423
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Exosc3
exosome component 3
acts_upstream_of_or_within
ISO
(PMID:21255825)
RGD
PMID:21255825
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
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Exosc6
exosome component 6
acts_upstream_of_or_within
ISO
(PMID:21255825)
RGD
PMID:21255825
NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515
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Hmces
5-hydroxymethylcytosine binding, ES cell specific
involved_in
ISS ISO
GO_REF:0000024 (PMID:31806351)
UniProt RGD
PMID:31806351
GO_REF:0000024
NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
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Kmt5b
lysine methyltransferase 5B
involved_in
ISS ISO
GO_REF:0000024 (PMID:28114273)
UniProt RGD
PMID:28114273
GO_REF:0000024
NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819
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Kmt5c
lysine methyltransferase 5C
involved_in
ISS ISO
GO_REF:0000024 (PMID:28114273)
UniProt RGD
PMID:28114273
GO_REF:0000024
NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145
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Mad2l2
mitotic arrest deficient 2 like 2
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
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Paxip1
PAX interacting protein 1
involved_in
ISO
(PMID:20671152)
RGD
PMID:20671152
NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
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Rif1
replication timing regulatory factor 1
involved_in
ISO
(PMID:23306439), (PMID:23333305), (PMID:23333306)
RGD
PMID:23306439 PMID:23333305 PMID:23333306
NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617
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Shld1
shieldin complex subunit 1
involved_in
ISO IBA
(PMID:29656893) GO_REF:0000033
RGD GO_Central
PMID:29656893
GO_REF:0000033
NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550
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Shld2
shieldin complex subunit 2
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr16:9,544,940...9,640,323
Ensembl chr16:9,548,660...9,639,965
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Shld3
shieldin complex subunit 3
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346
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Tfrc
transferrin receptor
involved_in
ISS ISO
GO_REF:0000024 (PMID:26642240)
UniProt RGD
PMID:26642240
GO_REF:0000024
NCBI chr11:68,163,413...68,185,257
Ensembl chr11:68,163,413...68,185,257
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Tp53bp1
tumor protein p53 binding protein 1
involved_in
ISO
(PMID:23345425), (PMID:23760478) (PMID:15077110), (PMID:15159415)
RGD
PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478
NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
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Mlh1
mutL homolog 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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Msh2
mutS homolog 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO
(PMID:23241889)
RGD
PMID:23241889
NCBI chr14:76,833,179...76,911,304
Ensembl chr14:76,835,637...76,913,641
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Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO
UniProtKB:Q9JK91 (PMID:10430621)
RGD
PMID:10430621
NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066
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Tgfb1
transforming growth factor, beta 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:14988498)
AgBase RGD
PMID:14988498
GO_REF:0000024
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Tnfsf13
TNF superfamily member 13
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:14988498) MGI:3038886 (PMID:14988498) GO_REF:0000033
RGD GO_Central
PMID:14988498
GO_REF:0000033
NCBI chr10:54,400,054...54,403,723
Ensembl chr10:54,400,065...54,403,042
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Clcf1
cardiotrophin-like cytokine factor 1
involved_in
ISO
(PMID:12023368)
RGD
PMID:12023368
NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
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Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:14988498)
RGD
PMID:14988498
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Stat6
signal transducer and activator of transcription 6
acts_upstream_of_or_within
ISO
MGI:107187 (PMID:10490661)
RGD
PMID:10490661
NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
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Atad5
ATPase family, AAA domain containing 5
acts_upstream_of_or_within
ISO
MGI:4127920 (PMID:25404367)
RGD
PMID:25404367
NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
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Cd28
Cd28 molecule
acts_upstream_of_or_within
ISO
MGI:1857150 (PMID:7688139)
RGD
PMID:7688139
NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
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Cd40
CD40 molecule
acts_upstream_of_or_within
ISO
(PMID:12882831)
RGD
PMID:12882831
NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
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Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:12882831)
RGD
PMID:12882831
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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Il2
interleukin 2
acts_upstream_of_or_within
ISO
MGI:1857191 (PMID:1830926)
RGD
PMID:1830926
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
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Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:12882831), (PMID:14988498)
RGD
PMID:12882831 PMID:14988498
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Mlh1
mutL homolog 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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Msh2
mutS homolog 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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Pagr1
Paxip1-associated glutamate-rich protein 1
involved_in
ISO
(PMID:26744420)
RGD
PMID:26744420
NCBI chr 1:181,622,698...181,625,024
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Paxip1
PAX interacting protein 1
involved_in
ISO
(PMID:26744420)
RGD
PMID:26744420
NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
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Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO
UniProtKB:Q9JK91 (PMID:10430621)
RGD
PMID:10430621
NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066
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Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (PMID:9015183)
RGD
PMID:9015183
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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Tbx21
T-box transcription factor 21
acts_upstream_of_or_within
ISO
MGI:2180194 (PMID:12882831)
RGD
PMID:12882831
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
MGI:2654936 (PMID:16532000)
RGD
PMID:16532000
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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B2m
beta-2 microglobulin
involved_in
ISO IEA
(PMID:24643698) GO_REF:0000107
RGD Ensembl
PMID:24643698
GO_REF:0000107
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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Cd55
CD55 molecule (Cromer blood group)
involved_in
ISO
(PMID:16818763)
RGD
PMID:16818763
NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831
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Cd7
Cd7 molecule
involved_in
ISO
(PMID:10652336)
RGD
PMID:10652336
NCBI chr10:106,304,046...106,306,963
Ensembl chr10:106,304,056...106,306,967
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Fzd5
frizzled class receptor 5
involved_in
ISO IEA
(PMID:16601243) GO_REF:0000107
RGD Ensembl
PMID:16601243
GO_REF:0000107
NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
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Malt1
MALT1 paracaspase
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
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Map3k7
mitogen activated protein kinase kinase kinase 7
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
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RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:24643698)
RGD
PMID:24643698
NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within
ISO
MGI:3716944 (PMID:16227612)
RGD
PMID:16227612
NCBI chr X:127,326,815...127,341,521
Ensembl chr X:127,326,859...127,341,519
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Sectm1b
secreted and transmembrane 1B
involved_in
ISO
(PMID:22184754)
RGD
PMID:22184754
NCBI chr10:106,324,070...106,333,779
Ensembl chr10:106,325,203...106,333,769
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:18354165), (PMID:9670042)
RGD
PMID:9670042 PMID:18354165
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Traf2
Tnf receptor-associated factor 2
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
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Traf6
TNF receptor associated factor 6
involved_in
ISO IEA
(PMID:15125833) GO_REF:0000107
RGD Ensembl
PMID:15125833
GO_REF:0000107
NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
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Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:9029087)
RGD
PMID:9029087
NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
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AABR07000137.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 1:1,307,185...1,308,310
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AABR07000147.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
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AABR07001348.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 1:39,668,472...39,670,153
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B2m
beta-2 microglobulin
acts_upstream_of_or_within
ISO
(PMID:16299293)
RGD
PMID:16299293
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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Cd1d1
CD1d1 molecule
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:10201995)
GO_Central RGD
PMID:10201995
GO_REF:0000033
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
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Cyrib
CYFIP related Rac1 interactor B
involved_in
ISO
(PMID:22522492)
RGD
PMID:22522492
NCBI chr 7:95,633,876...95,760,588
Ensembl chr 7:95,633,876...95,697,686
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Fadd
Fas associated via death domain
involved_in
ISS ISO
GO_REF:0000024 (PMID:21876153)
UniProt RGD
PMID:21876153
GO_REF:0000024
NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
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H60al
histocompatibility 60a like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,382,896...1,386,846
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Hfe
homeostatic iron regulator
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
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Hspa1b
heat shock protein family A (Hsp70) member 1B
IDA
prevention of heat shock-induced resistance to CTL-mediated killing
RGD
PMID:10679071
RGD:1298959
NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240 Ensembl chr20:3,856,006...3,873,240
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Hspa8
heat shock protein family A (Hsp70) member 8
IMP
RGD
PMID:8871636
RGD:10059395
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
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Il12a
interleukin 12A
involved_in
ISO IEA
(PMID:1674604), (PMID:2204066) GO_REF:0000107
RGD Ensembl
PMID:1674604 PMID:2204066
GO_REF:0000107
NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
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Il12b
interleukin 12B
involved_in
ISO
(PMID:14688363)
RGD
PMID:14688363
NCBI chr10:28,888,832...28,903,802
Ensembl chr10:28,893,008...28,902,903
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Il23a
interleukin 23 subunit alpha
involved_in
ISO
(PMID:14688363)
RGD
PMID:14688363
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
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Micb
MHC class I polypeptide-related sequence B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827
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Mill1
MHC I like leukocyte 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930
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P2rx7
purinergic receptor P2X 7
acts_upstream_of_or_within
ISO
MGI:3042190 (PMID:14761980)
RGD
PMID:14761980
NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
G
Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
(PMID:6233370)
RGD
PMID:6233370
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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Raet1l
retinoic acid early transcript 1L
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410
G
RT1-A
RT1 class I, locus A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-A1
RT1 class Ia, locus A1
IDA
RGD
PMID:11773898
RGD:2313503
NCBI chr20:4,905,309...4,914,593
G
RT1-A2
RT1 class Ia, locus A2
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:20195504), (PMID:25631937) GO_REF:0000033 (PMID:1538753)
RGD GO_Central
PMID:1538753 PMID:20195504 PMID:25631937
GO_REF:0000033
NCBI chr20:4,870,939...4,910,183
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RT1-CE1
RT1 class I, locus1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
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RT1-CE10
RT1 class I, locus CE10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,377,284...3,380,301
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RT1-CE11
RT1 class I, locus CE11
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362
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RT1-CE16
RT1 class I, locus CE16
involved_in
ISO
(PMID:22031944), (PMID:2420472), (PMID:25631937), (PMID:8805302)
RGD
PMID:2420472 PMID:8805302 PMID:22031944 PMID:25631937
NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
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RT1-CE3
RT1 class I, locus CE3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
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RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:23851683)
RGD
PMID:23851683
NCBI chr20:3,403,418...3,479,476
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RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:29884618)
RGD
PMID:29884618
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:29884618)
RGD
PMID:29884618
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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RT1-M2
RT1 class Ib, locus M2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723
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RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3701255 (PMID:16299293), (PMID:16461341), (PMID:16476767), (PMID:8464890)
GO_Central RGD
PMID:8464890 PMID:16299293 PMID:16461341 PMID:16476767
GO_REF:0000033
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
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RT1-M5
RT1 class Ib, locus M5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775
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RT1-M6-2
RT1 class I, locus M6, gene 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215
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RT1-N1
RT1 class Ib, locus N1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
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RT1-N2
RT1 class Ib, locus N2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900
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RT1-N3
RT1 class Ib, locus N3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530
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RT1-O1l1
RT1 class Ib, locus O1 like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
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RT1-S3
RT1 class Ib, locus S3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
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RT1-T24-1
RT1 class I, locus T24, gene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154
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RT1-T24-3
RT1 class I, locus T24, gene 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154
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RT1-T24-4
RT1 class I, locus T24, gene 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
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Stx7
syntaxin 7
involved_in
ISO IEA
(PMID:21438968) GO_REF:0000107
RGD Ensembl
PMID:21438968
GO_REF:0000107
NCBI chr 1:21,197,075...21,237,320
Ensembl chr 1:21,197,075...21,237,279
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Tap2
transporter 2, ATP binding cassette subfamily B member
acts_upstream_of_or_within involved_in
IDA ISO IEA
PMID:1758495 (PMID:1538753), (PMID:16299293) GO_REF:0000107
RGD Ensembl
PMID:1538753 PMID:16299293 PMID:1758495
GO_REF:0000107, RGD:1299069
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:18832695)
RGD
PMID:18832695
NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
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Mr1
major histocompatibility complex, class I-related
involved_in
ISO IEA
(PMID:31959982) GO_REF:0000107
RGD Ensembl
PMID:31959982
GO_REF:0000107
NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
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Slc22a13
solute carrier family 22 member 13
involved_in
ISO
(PMID:19282870)
RGD
PMID:19282870
NCBI chr 8:118,922,367...118,934,020
Ensembl chr 8:118,922,367...118,953,635
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Cd24
CD24 molecule
acts_upstream_of_or_within
ISO
(PMID:7774619)
RGD
PMID:7774619
NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
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Fbxo38
F-box protein 38
involved_in
ISO
(PMID:30487606)
RGD
PMID:30487606
NCBI chr18:55,956,950...56,004,013
Ensembl chr18:55,956,959...56,003,961
G
Hspd1
heat shock protein family D (Hsp60) member 1
involved_in
ISO
(PMID:10663613)
RGD
PMID:10663613
NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
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Klhl22
kelch-like family member 22
involved_in
ISO
(PMID:33109719)
RGD
PMID:33109719
NCBI chr11:83,190,891...83,231,746
Ensembl chr11:83,190,891...83,231,770
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Prkaa1
protein kinase AMP-activated catalytic subunit alpha 1
involved_in
ISO
(PMID:38377992)
RGD
PMID:38377992
NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:30282837)
RGD
PMID:30282837
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
G
Ywhag
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
involved_in
ISO
(PMID:38377992)
RGD
PMID:38377992
NCBI chr12:20,744,500...20,772,828
Ensembl chr12:20,744,535...20,772,827
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Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (PMID:6233370), (PMID:8566034)
RGD
PMID:6233370 PMID:8566034
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO
(PMID:22753936)
RGD
PMID:22753936
NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
G
Arid5a
AT-rich interaction domain 5A
involved_in
ISO
(PMID:27671645)
RGD
PMID:27671645
NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
G
Il18
interleukin 18
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:10653850) GO_REF:0000024
Ensembl RGD UniProt
PMID:10653850
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Il18r1
interleukin 18 receptor 1
involved_in
ISO
(PMID:10653850)
RGD
PMID:10653850
NCBI chr 9:42,727,416...42,760,971
Ensembl chr 9:42,727,869...42,760,715
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Il1b
interleukin 1 beta
involved_in
ISO ISS
(PMID:10653850) GO_REF:0000024
RGD UniProt
PMID:10653850
GO_REF:0000024
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Il1r1
interleukin 1 receptor type 1
involved_in
ISO ISS IEA
(PMID:10653850) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:10653850
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:42,504,917...42,580,958
Ensembl chr 9:42,504,735...42,579,937
G
Slamf1
signaling lymphocytic activation molecule family member 1
involved_in
ISO
(PMID:9126961)
RGD
PMID:9126961
NCBI chr13:84,270,316...84,305,497
Ensembl chr13:84,270,316...84,305,497
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:10761931)
RGD
PMID:10761931
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107
NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
G
Ccr2
C-C motif chemokine receptor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10657654)
BHF-UCL RGD
PMID:10657654
GO_REF:0000024
NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
G
Il12b
interleukin 12B
involved_in
ISO
(PMID:15114670) (PMID:14688363)
RGD
PMID:14688363 PMID:15114670
NCBI chr10:28,888,832...28,903,802
Ensembl chr10:28,893,008...28,902,903
G
Il12rb1
interleukin 12 receptor subunit beta 1
involved_in
ISO
(PMID:15114670)
RGD
PMID:15114670
NCBI chr16:18,620,228...18,633,207
Ensembl chr16:18,620,770...18,632,769
G
Il23a
interleukin 23 subunit alpha
involved_in
ISO IBA
(PMID:15114670) GO_REF:0000033 (PMID:14688363)
RGD GO_Central
PMID:14688363 PMID:15114670
GO_REF:0000033
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
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Il23r
interleukin 23 receptor
involved_in
ISO
(PMID:15114670)
RGD
PMID:15114670
NCBI chr 4:96,580,568...96,672,540
Ensembl chr 4:96,580,714...96,674,021
G
Il27ra
interleukin 27 receptor subunit alpha
acts_upstream_of_or_within
ISO
MGI:3525439 (PMID:11057672)
RGD
PMID:11057672
NCBI chr19:24,109,963...24,121,977
Ensembl chr19:24,109,972...24,121,938
G
Nlrp10
NLR family, pyrin domain containing 10
involved_in
ISO
(PMID:23071280)
RGD
PMID:23071280
NCBI chr 1:162,922,806...162,930,363
Ensembl chr 1:162,922,806...162,930,363
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Pla2g4a
phospholipase A2 group 4A
involved_in
IEA ISO
GO_REF:0000107 (PMID:16172261)
Ensembl RGD
PMID:16172261
GO_REF:0000107
NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2446070 (PMID:11894097)
RGD
PMID:11894097
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
G
Slc11a1
solute carrier family 11 member 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18984740)
Ensembl RGD
PMID:18984740
GO_REF:0000107
NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
G
Malt1
MALT1 paracaspase
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
G
Mir326
microRNA 326
acts_upstream_of_or_within
ISO
(PMID:19838199)
RGD
PMID:19838199
NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
G
Nfkbid
NFKB inhibitor delta
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
G
Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:26098997)
RGD
PMID:26098997
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
G
Brd2
bromodomain containing 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28262505)
UniProt RGD
PMID:28262505
GO_REF:0000024
NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
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Brd4
bromodomain containing 4
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
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Ep300
E1A binding protein p300
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Il23a
interleukin 23 subunit alpha
involved_in
IBA ISO
GO_REF:0000033 (PMID:19501566)
GO_Central RGD
PMID:19501566
GO_REF:0000033
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Opa1
OPA1, mitochondrial dynamin like GTPase
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:36171294) GO_REF:0000107
UniProt RGD Ensembl
PMID:36171294
GO_REF:0000024 GO_REF:0000107
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
G
Arid5a
AT-rich interaction domain 5A
involved_in
ISO
(PMID:27022145)
RGD
PMID:27022145
NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
G
Card9
caspase recruitment domain family, member 9
involved_in
ISO
(PMID:24231284), (PMID:29080677) (PMID:24470469), (PMID:32358020)
RGD
PMID:24231284 PMID:24470469 PMID:29080677 PMID:32358020
NCBI chr 3:9,171,814...9,180,310
Ensembl chr 3:9,171,815...9,180,237
G
Clec4a
C-type lectin domain family 4, member A
involved_in
ISO
(PMID:32358020)
RGD
PMID:32358020
NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402
G
Clec6a-ps1
C-type lectin domain family 6, member A, pseudogene 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 4:156,539,408...156,559,032
Ensembl chr 4:156,539,408...156,558,605 Ensembl chr 4:156,539,408...156,558,605
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Clec7a
C-type lectin domain containing 7A
involved_in
ISO
(PMID:32358020)
RGD
PMID:32358020
NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
G
Il23a
interleukin 23 subunit alpha
involved_in
ISO
(PMID:19501566)
RGD
PMID:19501566
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Mir301a
microRNA 301a
acts_upstream_of_or_within
ISO
(PMID:22517757)
RGD
PMID:22517757
NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
G
Nlrp10
NLR family, pyrin domain containing 10
involved_in
ISO
(PMID:23071280)
RGD
PMID:23071280
NCBI chr 1:162,922,806...162,930,363
Ensembl chr 1:162,922,806...162,930,363
G
Prkcq
protein kinase C, theta
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:16493044) GO_REF:0000024
Ensembl RGD UniProt
PMID:16493044
GO_REF:0000024 GO_REF:0000107
NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704
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Cd81
Cd81 molecule
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:8766544) GO_REF:0000107 (PMID:11046035)
UniProt RGD Ensembl
PMID:8766544 PMID:11046035
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660
G
Dennd1b
DENN domain containing 1B
involved_in
ISO
(PMID:26774822)
RGD
PMID:26774822
NCBI chr13:50,545,324...50,772,922
Ensembl chr13:50,545,836...50,770,601
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
(PMID:15087456)
RGD
PMID:15087456
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Il4
interleukin 4
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Il6
interleukin 6
involved_in
ISO
(PMID:11159963)
RGD
PMID:11159963
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:26098997)
RGD
PMID:26098997
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
G
Prkcz
protein kinase C, zeta
involved_in
ISS ISO
GO_REF:0000024 (PMID:15987782)
UniProt RGD
PMID:15987782
GO_REF:0000024
NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
G
Rsad2
radical S-adenosyl methionine domain containing 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19047684) GO_REF:0000107
UniProt RGD Ensembl
PMID:19047684
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:43,046,514...43,059,737
Ensembl chr 6:43,047,658...43,059,699
G
Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107
NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
G
RT1-A1
RT1 class Ia, locus A1
IMP
RGD
PMID:16000395
RGD:2313504
NCBI chr20:4,905,309...4,914,593
G
Btk
Bruton tyrosine kinase
IMP
RGD
PMID:22228807
RGD:11040701
NCBI chr X:97,722,796...97,762,315
Ensembl chr X:97,722,802...97,761,853
G
Fcer1a
Fc epsilon receptor Ia
acts_upstream_of_or_within
ISO
MGI:2383982 (PMID:8252632)
RGD
PMID:8252632
NCBI chr13:85,686,099...85,692,394
Ensembl chr13:85,686,092...85,692,351
G
Fcer1g
Fc epsilon receptor Ig
acts_upstream_of_or_within
ISO
MGI:2384004 (PMID:14764707)
RGD
PMID:14764707
NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443
G
Fcgr2a
Fc gamma receptor 2A
acts_upstream_of_or_within
ISO
MGI:1861924 (PMID:8552190), (PMID:8769481), (PMID:9743367)
RGD
PMID:8552190 PMID:8769481 PMID:9743367
NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
G
Ighg1
immunoglobulin heavy constant gamma 1
acts_upstream_of_or_within
ISO
(PMID:6952213), (PMID:8552190), (PMID:9743367)
RGD
PMID:6952213 PMID:8552190 PMID:9743367
Ensembl chr 6:132,389,370...132,393,397
G
C3
complement C3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861799 (PMID:11901193)
Ensembl RGD
PMID:11901193
GO_REF:0000107
NCBI chr 9:2,087,437...2,114,366
Ensembl chr 9:2,087,437...2,114,429
G
Fcer1g
Fc epsilon receptor Ig
acts_upstream_of_or_within
ISO
MGI:1857165|MGI:2384004 (PMID:11901193), (PMID:11911824), (PMID:8976192)
RGD
PMID:8976192 PMID:11901193 PMID:11911824
NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443
G
Fcgr1a
Fc gamma receptor 1A
acts_upstream_of_or_within
ISO
MGI:2664927 (PMID:11911824)
RGD
PMID:11911824
NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994
G
Fcgr2a
Fc gamma receptor 2A
acts_upstream_of_or_within
ISO
MGI:1861924 (PMID:11911824), (PMID:9834201)
RGD
PMID:9834201 PMID:11911824
NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
G
Ighg1
immunoglobulin heavy constant gamma 1
acts_upstream_of_or_within
ISO
(PMID:11901193), (PMID:9834201)
RGD
PMID:9834201 PMID:11901193
Ensembl chr 6:132,389,370...132,393,397
G
Btk
Bruton tyrosine kinase
IMP
RGD
PMID:22228807
RGD:11040701
NCBI chr X:97,722,796...97,762,315
Ensembl chr X:97,722,802...97,761,853
G
Fcer1g
Fc epsilon receptor Ig
acts_upstream_of_or_within
ISO
MGI:1857165 (PMID:8976192)
RGD
PMID:8976192
NCBI chr13:83,649,447...83,654,248
Ensembl chr13:83,649,449...83,671,443
G
Fcgr1a
Fc gamma receptor 1A
acts_upstream_of_or_within
ISO
MGI:2679238 (PMID:11911823)
RGD
PMID:11911823
NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994
G
Fcgr2a
Fc gamma receptor 2A
acts_upstream_of_or_within
ISO
MGI:1861924 (PMID:8769481)
RGD
PMID:8769481
NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
G
Zp3
zona pellucida glycoprotein 3
involved_in
ISO ISS IEA
(PMID:15579591) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:15579591
GO_REF:0000024 GO_REF:0000107
NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513
G
Nectin2
nectin cell adhesion molecule 2
involved_in
ISO
(PMID:15039383)
RGD
PMID:15039383
NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360
G
Pvr
PVR cell adhesion molecule
involved_in
ISO
(PMID:15039383)
RGD
PMID:15039383
NCBI chr 1:79,561,294...79,576,700
Ensembl chr 1:79,546,879...79,576,715
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all