 Gene-Chemical Interaction Annotations | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology AnnotationsMolecular Pathway Annotations |
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Analyze GeneStrainQTL List |
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Gene Ontology AnnotationsMolecular Pathway AnnotationsDisease Annotations
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Gene-Chemical Interaction Annotations
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Gene Ontology AnnotationsBiological Process
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Cellular Component
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Molecular Function
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Molecular Pathway AnnotationsReferences - curated| 1. | Backman-Petersson E, etal., Int Immunol. 2000 Jun;12(6):843-50. |
| 2. | Behrens D, etal., Transplantation. 2001 Dec 27;72(12):1974-82. |
| 3. | Fried A, etal., J Leukoc Biol. 2005 Sep;78(3):595-604. Epub 2005 Jul 6. |
| 4. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
| 5. | Gonzalez-Munoz AL, etal., J Immunol. 2003 Jul 1;171(1):274-84. |
| 6. | Okamoto M, etal., Transplantation. 2000 Oct 15;70(7):1060-7. |
| 7. | OMIM Disease Annotation Pipeline |
| 8. | Pipeline to import KEGG annotations from KEGG into RGD |
| 9. | RGD automated data pipeline |
| 10. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
| 11. | RGD automated import pipeline for gene-chemical interactions |
| 12. | Salgar SK, etal., Eur J Immunogenet. 1995 Dec;22(6):479-83. |
| 13. | Stevens J, etal., J Biol Chem. 2000 Sep 22;275(38):29217-24. |
| 14. | Zavazava N, etal., J Leukoc Biol. 2000 Jun;67(6):793-800. |
References - uncuratedGenomics
Position Markers| H2-D1 |
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| H2-Q6 |
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QTLs in Region (Rnor_6.0)| The following QTLs overlap with this region. |  | Full Report | | CSV | | TAB | | Printer | | Gviewer |
miRNA Target Status
Predicted Target Of
| The detailed report is available here: | | Full Report | | CSV | | TAB | | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
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Expression
RNA-SEQ ExpressionHigh: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM
| alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
| High | |||||||||||||
| Medium | 3 | 15 | 49 | 33 | 19 | 33 | 3 | 7 | 17 | 23 | 11 | ||
| Low | 26 | 8 | 8 | 8 | 8 | 8 | 63 | 16 | 17 | 8 | |||
| Below cutoff | 2 | 4 | 2 | 1 |
View RNA-SEQ Expression Data
Sequence
Nucleotide Sequences| RefSeq Transcripts | NM_001008827 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| XM_006256099 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AABR07044424 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| AAHX01099663 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| BX883042 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ212678 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ214333 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ228888 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ231496 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ233575 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ235186 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| KC222922 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| MG963095 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| U50448 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| X90375 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Reference Sequences
| RefSeq Acc Id: | ENSRNOT00000041590 ⟹ ENSRNOP00000039088 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENSRNOT00000078972 ⟹ ENSRNOP00000075633 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENSRNOT00000080900 ⟹ ENSRNOP00000071804 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENSRNOT00000081240 ⟹ ENSRNOP00000074602 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENSRNOT00000082538 ⟹ ENSRNOP00000072208 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENSRNOT00000089306 ⟹ ENSRNOP00000073206 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | NM_001008827 ⟹ NP_001008827 | ||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | ||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||
| Position: |
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| Sequence: |
ATGGGGGCGATGGCACCCCGCACGCTGCTCCTGATCCTGGCGGCCGCCCTGGCCCCGACCCAGAhide sequence |
| RefSeq Acc Id: | XM_006256099 ⟹ XP_006256161 | ||||||||||||
| RefSeq Status: | |||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Sequence: |
CCCGCGGGACTCAGACCGGTCCCGGATCTCAGATGGGGGCGATGGCACCCCGCACGCTGCTCCThide sequence |
Protein Sequences| Protein RefSeqs | NP_001008827 | (Get FASTA) | NCBI Sequence Viewer |
| XP_006256161 | (Get FASTA) | NCBI Sequence Viewer | |
| GenBank Protein | AAB41295 | (Get FASTA) | NCBI Sequence Viewer |
| AGV39019 | (Get FASTA) | NCBI Sequence Viewer | |
| AVP72125 | (Get FASTA) | NCBI Sequence Viewer | |
| CAA62025 | (Get FASTA) | NCBI Sequence Viewer | |
| CAE83927 | (Get FASTA) | NCBI Sequence Viewer |
Reference Sequences
| RefSeq Acc Id: | NP_001008827 ⟸ NM_001008827 |
| - Peptide Label: | precursor |
| - UniProtKB: | Q6MGB9 (UniProtKB/TrEMBL) |
| - Sequence: |
MGAMAPRTLLLILAAALAPTQTRAGSHSMRYFDIAVSRPGLGEPRFIIVGYVDDTEFVRFDSDAhide sequence |
| RefSeq Acc Id: | XP_006256161 ⟸ XM_006256099 |
| - Peptide Label: | isoform X1 |
| - Sequence: |
MGAMAPRTLLLILAAALAPTQTRAGSHSMRYFDIAVSRPGLGEPRFIIVGYVDDTEFVRFDSDAhide sequence |
| RefSeq Acc Id: | ENSRNOP00000072208 ⟸ ENSRNOT00000082538 |
| RefSeq Acc Id: | ENSRNOP00000039088 ⟸ ENSRNOT00000041590 |
| RefSeq Acc Id: | ENSRNOP00000073206 ⟸ ENSRNOT00000089306 |
| RefSeq Acc Id: | ENSRNOP00000071804 ⟸ ENSRNOT00000080900 |
| RefSeq Acc Id: | ENSRNOP00000074602 ⟸ ENSRNOT00000081240 |
| RefSeq Acc Id: | ENSRNOP00000075633 ⟸ ENSRNOT00000078972 |
Protein Domains
Ig-like
TranscriptomePromoters| RGD ID: | 13701407 | ||||||||
| Promoter ID: | EPDNEW_R11931 | ||||||||
| Type: | single initiation site | ||||||||
| Name: | RT1-A1_1 | ||||||||
| Description: | RT1 class Ia, locus A1 | ||||||||
| SO ACC ID: | SO:0000170 | ||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
| Experiment Methods: | Single-end sequencing. | ||||||||
| Position: |
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Strain Variation
Strain Sequence Variants (Rnor 6.0)
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Damaging VariantsAssembly: Rnor_5.0
| Chromosome | Start Pos | End Pos | Reference Nucleotide | Variant Nucleotide | Variant Type | Strain |
| 20 | 7474646 | 7474647 | C | A | snv | LE/OrlBarth (UDEL) |
| 20 | 7474661 | 7474662 | C | T | snv | DOB/Oda (KyushuU), LE/Stm (KyushuU), IS-Tlk/Kyo (KyushuU), NIG-III/Hok (KyushuU) |
| 20 | 7474705 | 7474706 | C | G | snv | Crl:SD (UDEL), SDLEF7/Barth (UDEL) |
| 20 | 7474937 | 7474938 | G | C | snv | COP/CrCrl (MCW & UW), BUF/MNa (KyushuU), ZFDM (KyushuU), SBH/Ygl (MCW), HWY/Slc (KyushuU), SBN/Ygl (MCW), GH/OmrMcwi (MCW), FHH/EurMcwi (MCW), SDLEF7/Barth (UDEL), ACI/EurMcwi (MCW), KFRS3B/Kyo (KyushuU) |
| 20 | 7474943 | 7474944 | G | A | snv | BUF/MNa (KyushuU), ZF (KyushuU), NIG-III/Hok (KyushuU), RCS/Kyo (KyushuU), SBN/Ygl (MCW), SDLEF7/Barth (UDEL), KFRS3B/Kyo (KyushuU), SBH/Ygl (MCW), LEC/Tj (KyushuU) |
| 20 | 7474943 | 7474944 | G | T | snv | IS/Kyo (KyushuU), LE/Stm (KyushuU), IS-Tlk/Kyo (KyushuU) |
| 20 | 7474946 | 7474947 | G | A | snv | IS/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU), BDIX/NemOda (KyushuU) |
| 20 | 7474958 | 7474959 | G | C | snv | HWY/Slc (KyushuU) |
| 20 | 7474964 | 7474965 | G | C | snv | ZF (KyushuU) |
| 20 | 7474994 | 7474995 | G | C | snv | SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL) |
| 20 | 7475035 | 7475036 | G | T | snv | HWY/Slc (KyushuU) |
| 20 | 7475045 | 7475046 | T | A | snv | IS/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU), LE/Stm (KyushuU) |
| 20 | 7475082 | 7475083 | C | T | snv | LE/Stm (KyushuU), IS-Tlk/Kyo (KyushuU), IS/Kyo (KyushuU) |
| 20 | 7475097 | 7475098 | A | G | snv | IS/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU), LE/Stm (KyushuU), ZFDM (KyushuU) |
| 20 | 7475365 | 7475366 | G | A | snv | SDLEF7/Barth (UDEL) |
| 20 | 7475378 | 7475379 | C | G | snv | SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL), Crl:SD (UDEL) |
| 20 | 7475387 | 7475388 | G | C | snv | F344/DuCrlCrlj (KyushuU), HTX/Kyo (KyushuU), ZF (KyushuU), F344/Stm (KyushuU), LEC/Tj (KyushuU), BDIX/NemOda (KyushuU), KFRS3B/Kyo (KyushuU), NIG-III/Hok (KyushuU), RCS/Kyo (KyushuU), BUF/MNa (KyushuU), F344/Jcl (KyushuU), F344/NSlc (KyushuU) |
| 20 | 7475387 | 7475388 | G | T | snv | ZFDM (KyushuU) |
| 20 | 7475398 | 7475399 | A | C | snv | KFRS3B/Kyo (KyushuU), Crl:SD (UDEL), BUF/MNa (KyushuU), LEC/Tj (KyushuU), LE/OrlBarth (UDEL), SDLEF7/Barth (UDEL) |
| 20 | 7475399 | 7475400 | C | G | snv | LEC/Tj (KyushuU), IS/Kyo (KyushuU), ZF (KyushuU), FHL/EurMcwi (MCW), KFRS3B/Kyo (KyushuU), DOB/Oda (KyushuU), HTX/Kyo (KyushuU), F344/DuCrlCrlj (KyushuU), BUF/MNa (KyushuU), SBN/Ygl (MCW), F344/Stm (KyushuU), RCS/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU) |
| 20 | 7475400 | 7475401 | G | A | snv | HWY/Slc (KyushuU), COP/CrCrl (MCW & UW), ACI/EurMcwi (MCW) |
| 20 | 7475410 | 7475411 | A | G | snv | NIG-III/Hok (KyushuU), BDIX/NemOda (KyushuU), LE/Stm (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), ZFDM (KyushuU), Crl:SD (UDEL), F344/Jcl (KyushuU), BUF/MNa (KyushuU), RCS/Kyo (KyushuU), SDLEF7/Barth (UDEL) |
| 20 | 7475411 | 7475412 | C | G | snv | F344/NSlc (KyushuU), F344/DuCrlCrlj (KyushuU), F344/Stm (KyushuU) |
| 20 | 7475412 | 7475413 | G | A | snv | LE/Stm (KyushuU), BDIX/NemOda (KyushuU), SDLEF7/Barth (UDEL), NIG-III/Hok (KyushuU), Crl:SD (UDEL), BDIX.Cg-Tal/NemOda (KyushuU) |
| 20 | 7475412 | 7475413 | G | T | snv | DOB/Oda (KyushuU), F344/NSlc (KyushuU), BUF/MNa (KyushuU), ZF (KyushuU), RCS/Kyo (KyushuU), LEC/Tj (KyushuU), HWY/Slc (KyushuU), IS/Kyo (KyushuU), ZFDM (KyushuU), F344/Jcl (KyushuU), F344/DuCrlCrlj (KyushuU), KFRS3B/Kyo (KyushuU), F344/Stm (KyushuU), IS-Tlk/Kyo (KyushuU), HTX/Kyo (KyushuU) |
| 20 | 7475452 | 7475453 | G | C | snv | LE/OrlBarth (UDEL) |
| 20 | 7475493 | 7475494 | A | G | snv | RCS/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU), LEC/Tj (KyushuU), ZF (KyushuU), LE/Stm (KyushuU), HTX/Kyo (KyushuU), BDIX/NemOda (KyushuU), KFRS3B/Kyo (KyushuU), ZFDM (KyushuU), NIG-III/Hok (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), IS/Kyo (KyushuU) |
| 20 | 7475494 | 7475495 | C | G | snv | SBN/Ygl (MCW), FHL/EurMcwi (MCW) |
| 20 | 7475505 | 7475506 | T | A | snv | LEC/Tj (KyushuU), SBN/Ygl (MCW) |
| 20 | 7475505 | 7475506 | T | G | snv | LE/Stm (KyushuU), NIG-III/Hok (KyushuU), ZFDM (KyushuU) |
| 20 | 7475506 | 7475507 | T | G | snv | SBN/Ygl (MCW) |
| 20 | 7475507 | 7475508 | T | G | snv | ZF (KyushuU), ZFDM (KyushuU), HTX/Kyo (KyushuU), NIG-III/Hok (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), SBN/Ygl (MCW), LEC/Tj (KyushuU) |
| 20 | 7475509 | 7475510 | C | G | snv | IS/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU), BDIX/NemOda (KyushuU), LE/OrlBarth (UDEL), ZFDM (KyushuU), SDLEF7/Barth (UDEL), LE/Stm (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), RCS/Kyo (KyushuU), LEC/Tj (KyushuU) |
| 20 | 7475509 | 7475510 | C | T | snv | HTX/Kyo (KyushuU) |
| 20 | 7475518 | 7475519 | T | A | snv | F344/Stm (KyushuU), F344/DuCrlCrlj (KyushuU), F344/Jcl (KyushuU), F344/NSlc (KyushuU) |
| 20 | 7475519 | 7475520 | C | G | snv | ZFDM (KyushuU), F344/DuCrlCrlj (KyushuU), IS/Kyo (KyushuU), HTX/Kyo (KyushuU), RCS/Kyo (KyushuU), F344/NSlc (KyushuU), LEC/Tj (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), F344/Stm (KyushuU), LE/OrlBarth (UDEL), LE/Stm (KyushuU), F344/Jcl (KyushuU), BDIX/NemOda (KyushuU), DOB/Oda (KyushuU), SDLEF7/Barth (UDEL), IS-Tlk/Kyo (KyushuU) |
| 20 | 7475524 | 7475525 | G | A | snv | ZF (KyushuU), BUF/MNa (KyushuU), HWY/Slc (KyushuU), FHL/EurMcwi (MCW), ACI/EurMcwi (MCW), ZFDM (KyushuU), F344/NSlc (KyushuU), COP/CrCrl (MCW & UW), F344/DuCrlCrlj (KyushuU), F344/Stm (KyushuU) |
| 20 | 7475524 | 7475525 | G | T | snv | SDLEF7/Barth (UDEL), LEC/Tj (KyushuU), IS/Kyo (KyushuU), NIG-III/Hok (KyushuU), IS-Tlk/Kyo (KyushuU), RCS/Kyo (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), DOB/Oda (KyushuU), LE/Stm (KyushuU), BDIX/NemOda (KyushuU), KFRS3B/Kyo (KyushuU), LE/OrlBarth (UDEL), ZFDM (KyushuU), HTX/Kyo (KyushuU), Crl:SD (UDEL) |
| 20 | 7475539 | 7475540 | A | C | snv | SBN/Ygl (MCW), LEC/Tj (KyushuU), KFRS3B/Kyo (KyushuU), FHL/EurMcwi (MCW) |
| 20 | 7475556 | 7475557 | A | G | snv | IS-Tlk/Kyo (KyushuU) |
| 20 | 7475557 | 7475558 | G | T | snv | LE/Stm (KyushuU), LE/OrlBarth (UDEL), BDIX/NemOda (KyushuU), IS-Tlk/Kyo (KyushuU), SDLEF7/Barth (UDEL), DOB/Oda (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), ZFDM (KyushuU), Crl:SD (UDEL), NIG-III/Hok (KyushuU) |
| 20 | 7475559 | 7475560 | C | T | snv | DOB/Oda (KyushuU) |
| 20 | 7475568 | 7475569 | T | G | snv | F344/Stm (KyushuU), F344/NSlc (KyushuU), F344/DuCrlCrlj (KyushuU), F344/Jcl (KyushuU) |
| 20 | 7475575 | 7475576 | A | G | snv | Crl:SD (UDEL) |
| 20 | 7475586 | 7475587 | G | A | snv | ZF (KyushuU), F344/DuCrlCrlj (KyushuU), F344/Jcl (KyushuU), F344/NSlc (KyushuU), HWY/Slc (KyushuU), F344/Stm (KyushuU), IS/Kyo (KyushuU), DOB/Oda (KyushuU), LEC/Tj (KyushuU) |
| 20 | 7475589 | 7475590 | G | A | snv | BDIX.Cg-Tal/NemOda (KyushuU), ZF (KyushuU), LE/OrlBarth (UDEL), HTX/Kyo (KyushuU), DOB/Oda (KyushuU), LEC/Tj (KyushuU), LE/Stm (KyushuU), NIG-III/Hok (KyushuU), KFRS3B/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU), BDIX/NemOda (KyushuU), HWY/Slc (KyushuU), IS/Kyo (KyushuU), RCS/Kyo (KyushuU), ZFDM (KyushuU), Crl:SD (UDEL) |
| 20 | 7475604 | 7475605 | T | C | snv | FHL/EurMcwi (MCW), SBN/Ygl (MCW) |
| 20 | 7475634 | 7475635 | C | T | snv | SBN/Ygl (MCW), LE/OrlBarth (UDEL), Crl:SD (UDEL) |
| 20 | 7476611 | 7476612 | T | A | snv | SBN/Ygl (MCW), FHH/EurMcwi (MCW), COP/CrCrl (MCW & UW), SBH/Ygl (MCW), ACI/EurMcwi (MCW) |
| 20 | 7476621 | 7476622 | G | A | snv | BDIX.Cg-Tal/NemOda (KyushuU), RCS/Kyo (KyushuU), BUF/MNa (KyushuU), BDIX/NemOda (KyushuU), FHL/EurMcwi (MCW), HTX/Kyo (KyushuU), KFRS3B/Kyo (KyushuU), HWY/Slc (KyushuU), LEC/Tj (KyushuU) |
| 20 | 7476622 | 7476623 | C | T | snv | SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL), Crl:SD (UDEL), FHH/EurMcwi (MCW) |
| 20 | 7476633 | 7476634 | C | T | snv | F344/Stm (KyushuU), F344/NSlc (KyushuU) |
| 20 | 7476639 | 7476640 | C | T | snv | SBN/Ygl (MCW), KFRS3B/Kyo (KyushuU), BUF/MNa (KyushuU), RCS/Kyo (KyushuU) |
| 20 | 7476744 | 7476745 | A | G | snv | LE/OrlBarth (UDEL), SDLEF7/Barth (UDEL) |
| 20 | 7476774 | 7476775 | G | A | snv | LE/OrlBarth (UDEL), Crl:SD (UDEL), SDLEF7/Barth (UDEL) |
| 20 | 7476798 | 7476799 | T | G | snv | GH/OmrMcwi (MCW), HWY/Slc (KyushuU) |
| 20 | 7476813 | 7476814 | C | T | snv | ZF (KyushuU), HWY/Slc (KyushuU), BDIX/NemOda (KyushuU), F344/NSlc (KyushuU), LEC/Tj (KyushuU), F344/DuCrlCrlj (KyushuU), HTX/Kyo (KyushuU), IS/Kyo (KyushuU), DOB/Oda (KyushuU), NIG-III/Hok (KyushuU), ZFDM (KyushuU), F344/Stm (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), KFRS3B/Kyo (KyushuU), RCS/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU), F344/Jcl (KyushuU) |
| 20 | 7476814 | 7476815 | T | C | snv | F344/Jcl (KyushuU), DOB/Oda (KyushuU), RCS/Kyo (KyushuU), HTX/Kyo (KyushuU), BDIX/NemOda (KyushuU), SDLEF7/Barth (UDEL), NIG-III/Hok (KyushuU), F344/DuCrlCrlj (KyushuU), F344/NSlc (KyushuU), IS-Tlk/Kyo (KyushuU), HWY/Slc (KyushuU), LEC/Tj (KyushuU), LE/OrlBarth (UDEL), BDIX.Cg-Tal/NemOda (KyushuU), KFRS3B/Kyo (KyushuU), ZF (KyushuU), ZFDM (KyushuU), BUF/MNa (KyushuU), F344/Stm (KyushuU), IS/Kyo (KyushuU), LE/Stm (KyushuU) |
| 20 | 7476819 | 7476820 | A | G | snv | GH/OmrMcwi (MCW) |
| 20 | 7476826 | 7476827 | A | C | snv | GH/OmrMcwi (MCW) |
| 20 | 7476829 | 7476830 | A | G | snv | IS-Tlk/Kyo (KyushuU), LE/Stm (KyushuU), F344/DuCrlCrlj (KyushuU), F344/Jcl (KyushuU), SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL), IS/Kyo (KyushuU) |
| 20 | 7476830 | 7476831 | T | G | snv | LEC/Tj (KyushuU), Crl:SD (UDEL), KFRS3B/Kyo (KyushuU), LE/Stm (KyushuU), SBN/Ygl (MCW), ZF (KyushuU), HTX/Kyo (KyushuU), LE/OrlBarth (UDEL), BDIX/NemOda (KyushuU), FHL/EurMcwi (MCW), BUF/MNa (KyushuU), SDLEF7/Barth (UDEL), BDIX.Cg-Tal/NemOda (KyushuU), HWY/Slc (KyushuU), RCS/Kyo (KyushuU) |
| 20 | 7476841 | 7476842 | G | A | snv | SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL), LE/Stm (KyushuU) |
| 20 | 7476848 | 7476849 | G | T | snv | SDLEF7/Barth (UDEL), LE/Stm (KyushuU), LE/OrlBarth (UDEL) |
| 20 | 7476870 | 7476871 | C | A | snv | LE/Stm (KyushuU), LE/OrlBarth (UDEL), SDLEF7/Barth (UDEL), LEC/Tj (KyushuU), RCS/Kyo (KyushuU), Crl:SD (UDEL) |
| 20 | 7477013 | 7477014 | C | T | snv | ZF (KyushuU) |
| 20 | 7477016 | 7477017 | C | G | snv | HWY/Slc (KyushuU) |
| 20 | 7477018 | 7477019 | G | A | snv | ZF (KyushuU) |
| 20 | 7477294 | 7477295 | A | G | snv | SDLEF7/Barth (UDEL), SBH/Ygl (MCW), FHL/EurMcwi (MCW), LE/OrlBarth (UDEL), BUF/MNa (KyushuU), KFRS3B/Kyo (KyushuU), SBN/Ygl (MCW), HTX/Kyo (KyushuU), RCS/Kyo (KyushuU) |
| 20 | 7477536 | 7477537 | G | A | snv | GH/OmrMcwi (MCW), SR/JrHsd (MCW), SBN/Ygl (MCW), SBH/Ygl (MCW), SS/JrHsdMcwi (MCW) |
| 20 | 7477549 | 7477550 | C | T | snv | LEC/Tj (KyushuU) |
| 20 | 7477555 | 7477556 | G | T | snv | LEC/Tj (KyushuU) |
Assembly: Rnor_6.0
| Chromosome | Start Pos | End Pos | Reference Nucleotide | Variant Nucleotide | Variant Type | Strain |
| 20 | 5414511 | 5414512 | C | A | snv | SBH/Ygl (MCW), SS/JrHsdMcwi (MCW), ACI/EurMcwi (MCW) |
| 20 | 5414516 | 5414517 | A | T | snv | SS/JrHsdMcwi (MCW), ACI/EurMcwi (MCW), SBH/Ygl (MCW) |
| 20 | 5414517 | 5414518 | C | T | snv | CDR, SBH/Ygl (MCW), CDS |
| 20 | 5414522 | 5414523 | C | T | snv | SS/JrHsdMcwi (MCW), COP/CrCrl (MCW & UW), ACI/EurMcwi (MCW) |
| 20 | 5414546 | 5414547 | G | A | snv | COP/CrCrl (MCW & UW), ACI/EurMcwi (MCW), SS/JrHsdMcwi (MCW) |
| 20 | 5414549 | 5414550 | C | A | snv | CDS, SBH/Ygl (MCW), CDR |
| 20 | 5414555 | 5414556 | C | G | snv | FHL/EurMcwi (MCW), SBN/Ygl (MCW) |
| 20 | 5414559 | 5414560 | C | T | snv | CDS, CDR |
| 20 | 5414561 | 5414562 | C | G | snv | SBN/Ygl (MCW), MR/N (MCW) |
| 20 | 5414561 | 5414562 | C | T | snv | SBH/Ygl (MCW), SR/JrHsd (MCW), FHL/EurMcwi (MCW), SS/JrHsdMcwi (MCW) |
| 20 | 5414562 | 5414563 | G | T | snv | CDR, ACI/N (MCW), CDS |
| 20 | 5414793 | 5414794 | G | C | snv | COP/CrCrl (MCW & UW), ACI/EurMcwi (MCW), CDR, CDS |
| 20 | 5414799 | 5414800 | G | A | snv | SBN/Ygl (MCW), SBH/Ygl (MCW) |
| 20 | 5414799 | 5414800 | G | T | snv | SBH/Ygl (MCW) |
| 20 | 5414802 | 5414803 | G | A | snv | CDS, CDR |
| 20 | 5414814 | 5414815 | G | C | snv | GK/Ox (RGD) |
| 20 | 5414886 | 5414887 | G | T | snv | SBH/Ygl (MCW) |
| 20 | 5414937 | 5414938 | C | A | snv | SS/JrHsdMcwi (MCW) |
| 20 | 5414940 | 5414941 | G | A | snv | WN/N (MCW) |
| 20 | 5414949 | 5414950 | G | A | snv | ACI/EurMcwi (MCW) |
| 20 | 5414966 | 5414967 | A | C | snv | GK/Ox (RGD), ACI/EurMcwi (MCW) |
| 20 | 5414967 | 5414968 | G | A | snv | FHL/EurMcwi (MCW) |
| 20 | 5414992 | 5414993 | G | A | snv | FHL/EurMcwi (MCW) |
| 20 | 5415029 | 5415030 | G | C | snv | FHL/EurMcwi (MCW) |
| 20 | 5415224 | 5415225 | C | A | snv | CDR, CDS |
| 20 | 5415234 | 5415235 | C | G | snv | GH/OmrMcwi (MCW), CDS, SBN/Ygl (MCW), CDR |
| 20 | 5415254 | 5415255 | A | C | snv | CDR, SBN/Ygl (MCW), CDS, SBH/Ygl (MCW), FHL/EurMcwi (MCW) |
| 20 | 5415255 | 5415256 | C | G | snv | MR/N (MCW), FHL/EurMcwi (MCW) |
| 20 | 5415266 | 5415267 | A | G | snv | ACI/EurMcwi (MCW), SBN/Ygl (MCW), FHL/EurMcwi (MCW), COP/CrCrl (MCW & UW), WN/N (MCW), MR/N (MCW), CDR, FHH/EurMcwi (MCW), GH/OmrMcwi (MCW), SBH/Ygl (MCW), SS/JrHsdMcwi (MCW), CDS |
| 20 | 5415267 | 5415268 | C | G | snv | SS/JrHsdMcwi (MCW), SR/JrHsd (MCW) |
| 20 | 5415268 | 5415269 | G | A | snv | CDR, SS/JrHsdMcwi (MCW), GH/OmrMcwi (MCW), SBH/Ygl (MCW), CDS, COP/CrCrl (MCW & UW) |
| 20 | 5415268 | 5415269 | G | C | snv | FHH/EurMcwi (MCW) |
| 20 | 5415268 | 5415269 | G | T | snv | ACI/EurMcwi (MCW), SR/JrHsd (MCW), FHL/EurMcwi (MCW), SBN/Ygl (MCW) |
| 20 | 5415272 | 5415273 | G | T | snv | FHL/EurMcwi (MCW) |
| 20 | 5415281 | 5415282 | G | C | snv | CDR, CDS |
| 20 | 5415289 | 5415290 | G | A | snv | CDR, CDS |
| 20 | 5415290 | 5415291 | A | G | snv | CDS, CDR |
| 20 | 5415311 | 5415312 | G | T | snv | ACI/EurMcwi (MCW), FHH/EurMcwi (MCW), SBN/Ygl (MCW), SR/JrHsd (MCW), FHL/EurMcwi (MCW), SS/JrHsdMcwi (MCW) |
| 20 | 5415319 | 5415320 | A | G | snv | SS/JrHsdMcwi (MCW), SR/JrHsd (MCW), FHL/EurMcwi (MCW) |
| 20 | 5415321 | 5415322 | C | G | snv | GH/OmrMcwi (MCW) |
| 20 | 5415337 | 5415338 | C | A | snv | SBH/Ygl (MCW) |
| 20 | 5415338 | 5415339 | T | A | snv | FHH/EurMcwi (MCW) |
| 20 | 5415344 | 5415345 | C | T | snv | SBH/Ygl (MCW) |
| 20 | 5415348 | 5415349 | G | T | snv | CDS, GH/OmrMcwi (MCW) |
| 20 | 5415349 | 5415350 | A | G | snv | FHL/EurMcwi (MCW), CDR, MR/N (MCW), Buf/N (MCW), GH/OmrMcwi (MCW), M520/N (MCW), CDS, SBN/Ygl (MCW), SBH/Ygl (MCW), FHH/EurMcwi (MCW) |
| 20 | 5415365 | 5415366 | C | G | snv | COP/CrCrl (MCW & UW), CDS, ACI/EurMcwi (MCW), FHH/EurMcwi (MCW), SBH/Ygl (MCW), GH/OmrMcwi (MCW), CDR |
| 20 | 5415375 | 5415376 | C | G | snv | GH/OmrMcwi (MCW), CDR, SBH/Ygl (MCW), CDS, ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW) |
| 20 | 5415380 | 5415381 | G | A | snv | SS/JrHsdMcwi (MCW), SR/JrHsd (MCW), SBN/Ygl (MCW), FHL/EurMcwi (MCW) |
| 20 | 5415380 | 5415381 | G | T | snv | CDR, COP/CrCrl (MCW & UW), CDS, GH/OmrMcwi (MCW), SBH/Ygl (MCW), FHH/EurMcwi (MCW), ACI/EurMcwi (MCW) |
| 20 | 5415395 | 5415396 | A | C | snv | FHL/EurMcwi (MCW), SBN/Ygl (MCW) |
| 20 | 5415400 | 5415401 | G | A | snv | COP/CrCrl (MCW & UW) |
| 20 | 5415413 | 5415414 | G | T | snv | GH/OmrMcwi (MCW), WN/N (MCW), CDS, CDR, ACI/N (MCW) |
| 20 | 5415421 | 5415422 | G | T | snv | SR/JrHsd (MCW) |
| 20 | 5415422 | 5415423 | C | A | snv | CDS, CDR |
| 20 | 5415424 | 5415425 | T | G | snv | ACI/EurMcwi (MCW), SR/JrHsd (MCW), SS/JrHsdMcwi (MCW) |
| 20 | 5415445 | 5415446 | G | A | snv | SBH/Ygl (MCW), COP/CrCrl (MCW & UW), WKY/N (MCW), CDR, FHH/EurMcwi (MCW), GH/OmrMcwi (MCW), SBN/Ygl (MCW), CDS, FHL/EurMcwi (MCW), ACI/EurMcwi (MCW), SS/JrHsdMcwi (MCW) |
| 20 | 5415450 | 5415451 | G | T | snv | ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), SR/JrHsd (MCW) |
| 20 | 5415454 | 5415455 | C | T | snv | COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), SS/JrHsdMcwi (MCW) |
| 20 | 5415468 | 5415469 | G | T | snv | FHL/EurMcwi (MCW), SR/JrHsd (MCW) |
| 20 | 5415472 | 5415473 | G | A | snv | COP/CrCrl (MCW & UW), SBH/Ygl (MCW) |
| 20 | 5415491 | 5415492 | G | A | snv | SS/JrHsdMcwi (MCW) |
| 20 | 5416467 | 5416468 | T | A | snv | SBH/Ygl (MCW), FHL/EurMcwi (MCW), SBN/Ygl (MCW) |
| 20 | 5416477 | 5416478 | G | A | snv | FHL/EurMcwi (MCW), SBN/Ygl (MCW) |
| 20 | 5416495 | 5416496 | C | A | snv | FHL/EurMcwi (MCW) |
| 20 | 5416495 | 5416496 | C | T | snv | SBN/Ygl (MCW), SBH/Ygl (MCW) |
| 20 | 5416571 | 5416572 | A | T | snv | FHL/EurMcwi (MCW) |
| 20 | 5416582 | 5416583 | G | A | snv | SBN/Ygl (MCW) |
| 20 | 5416600 | 5416601 | A | G | snv | FHL/EurMcwi (MCW) |
| 20 | 5416630 | 5416631 | G | A | snv | SBN/Ygl (MCW), FHL/EurMcwi (MCW) |
| 20 | 5416654 | 5416655 | T | G | snv | GH/OmrMcwi (MCW), CDS, CDR |
| 20 | 5416669 | 5416670 | C | T | snv | CDS, WN/N (MCW), ACI/N (MCW), F344/NRrrc (MCW), CDR |
| 20 | 5416670 | 5416671 | T | C | snv | FHH/EurMcwi (MCW), CDR, COP/CrCrl (MCW & UW), F344/NRrrc (MCW), WN/N (MCW), ACI/N (MCW), CDS |
| 20 | 5416675 | 5416676 | A | G | snv | CDR, WKY/N (MCW), CDS, GH/OmrMcwi (MCW) |
| 20 | 5416682 | 5416683 | A | C | snv | CDR, WKY/N (MCW), CDS, GH/OmrMcwi (MCW) |
| 20 | 5416685 | 5416686 | A | G | snv | SR/JrHsd (MCW), FHH/EurMcwi (MCW), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), SS/JrHsdMcwi (MCW), SBH/Ygl (MCW) |
| 20 | 5416686 | 5416687 | T | G | snv | SBN/Ygl (MCW), FHL/EurMcwi (MCW) |
| 20 | 5416697 | 5416698 | G | A | snv | SBN/Ygl (MCW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW) |
| 20 | 5416704 | 5416705 | G | T | snv | FHH/EurMcwi (MCW), SBN/Ygl (MCW), SBH/Ygl (MCW) |
| 20 | 5416866 | 5416867 | A | G | snv | F344/NRrrc (MCW) |
| 20 | 5416869 | 5416870 | C | T | snv | FHL/EurMcwi (MCW) |
| 20 | 5416889 | 5416890 | C | A | snv | ACI/EurMcwi (MCW), FHH/EurMcwi (MCW), COP/CrCrl (MCW & UW), SBH/Ygl (MCW) |
| 20 | 5416889 | 5416890 | C | G | snv | CDR, GH/OmrMcwi (MCW), CDS |
| 20 | 5416902 | 5416903 | C | T | snv | COP/CrCrl (MCW & UW), SBH/Ygl (MCW), ACI/EurMcwi (MCW), CDR, CDS, GH/OmrMcwi (MCW) |
| 20 | 5416904 | 5416905 | A | G | snv | CDS, CDR |
| 20 | 5416921 | 5416922 | C | G | snv | CDS, CDR |
| 20 | 5416934 | 5416935 | G | C | snv | CDS, CDR, GH/OmrMcwi (MCW) |
| 20 | 5417150 | 5417151 | A | G | snv | FHL/EurMcwi (MCW), SBN/Ygl (MCW), SBH/Ygl (MCW), MR/N (MCW) |
| 20 | 5417383 | 5417384 | C | A | snv | SBH/Ygl (MCW) |
| 20 | 5417392 | 5417393 | G | A | snv | SBH/Ygl (MCW) |
Assembly: RGSC_v3.4
| Chromosome | Start Pos | End Pos | Reference Nucleotide | Variant Nucleotide | Variant Type | Strain |
| 20 | 5056769 | 5056770 | G | T | snv | HCR/2Mco (UMich), HCR/1Mco (UMich), LCR/2Mco (UMich) |
| 20 | 5056829 | 5056830 | C | G | snv | MR/N (KNAW) |
| 20 | 5056829 | 5056830 | C | T | snv | ACI/EurMcwi (MCW), FHL/EurMcwi (MCW) |
| 20 | 5056830 | 5056831 | G | T | snv | ACI/N (KNAW) |
| 20 | 5057061 | 5057062 | G | C | snv | ACI/EurMcwi (ICL), COP/CrCrl (MCW & UW), GH/OmrMcwi (MCW), FHH/EurMcwi (MCW), BBDP/WorN (ICL), ACI/EurMcwi (MCW), SHR/OlaIpcv (ICL), SHRSP/Gcrc (ICL) |
| 20 | 5057208 | 5057209 | G | A | snv | SHRSP/Gcrc (MDC), WN/N (KNAW) |
| 20 | 5057221 | 5057222 | A | G | snv | HCR/2Mco (UMich), LCR/2Mco (UMich), LCR/1Mco (UMich), HCR/1Mco (UMich) |
| 20 | 5057260 | 5057261 | G | A | snv | LCR/2Mco (UMich), HCR/1Mco (UMich), HCR/2Mco (UMich), LCR/1Mco (UMich) |
| 20 | 5057277 | 5057278 | G | C | snv | HCR/1Mco (UMich), LCR/1Mco (UMich), HCR/2Mco (UMich), LCR/2Mco (UMich) |
| 20 | 5057523 | 5057524 | C | G | snv | FHL/EurMcwi (MCW), MR/N (KNAW) |
| 20 | 5057534 | 5057535 | A | G | snv | MR/N (KNAW), WN/N (KNAW) |
| 20 | 5057617 | 5057618 | A | G | snv | M520/N (KNAW), BUF/N (KNAW), MR/N (KNAW) |
| 20 | 5057618 | 5057619 | C | T | snv | FHH/EurMcwi (MCW), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), SS/JrHsdMcwi (MDC) |
| 20 | 5057629 | 5057630 | T | G | snv | SHRSP/Gcrc (MDC) |
| 20 | 5057630 | 5057631 | T | C | snv | COP/CrCrl (MCW & UW) |
| 20 | 5057631 | 5057632 | T | G | snv | COP/CrCrl (MCW & UW) |
| 20 | 5057643 | 5057644 | C | G | snv | COP/CrCrl (MCW & UW) |
| 20 | 5057648 | 5057649 | G | A | snv | FHL/EurMcwi (MCW), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW) |
| 20 | 5057663 | 5057664 | A | C | snv | FHL/EurMcwi (MCW) |
| 20 | 5057713 | 5057714 | G | A | snv | WKY/N (KNAW), FHH/EurMcwi (MDC) |
| 20 | 5057728 | 5057729 | T | C | snv | FHL/EurMcwi (MCW) |
| 20 | 5058735 | 5058736 | T | A | snv | HCR/1Mco (UMich), LCR/2Mco (UMich), FHL/EurMcwi (MCW), LE/Stm (KNAW), HCR/2Mco (UMich) |
| 20 | 5058745 | 5058746 | G | A | snv | FHL/EurMcwi (MCW) |
| 20 | 5058763 | 5058764 | C | A | snv | FHL/EurMcwi (MCW) |
| 20 | 5058781 | 5058782 | G | A | snv | LCR/2Mco (UMich), HCR/2Mco (UMich), LCR/1Mco (UMich), HCR/1Mco (UMich) |
| 20 | 5058822 | 5058823 | C | A | snv | LCR/1Mco (UMich) |
| 20 | 5058839 | 5058840 | A | T | snv | FHL/EurMcwi (MCW) |
| 20 | 5058868 | 5058869 | A | G | snv | LCR/2Mco (UMich), HCR/2Mco (UMich), LCR/1Mco (UMich) |
| 20 | 5058898 | 5058899 | G | A | snv | FHL/EurMcwi (MCW) |
| 20 | 5058922 | 5058923 | T | G | snv | GH/OmrMcwi (MCW), FHL/EurMcwi (MCW) |
| 20 | 5058937 | 5058938 | C | T | snv | ACI/N (KNAW), F344/NRrrc (KNAW), WN/N (KNAW) |
| 20 | 5058938 | 5058939 | T | C | snv | FHL/EurMcwi (MCW), ACI/N (KNAW), COP/CrCrl (MCW & UW), WN/N (KNAW), F344/NRrrc (KNAW), SR/JrHsd (MCW), FHH/EurMcwi (MCW), ACI/EurMcwi (MCW) |
| 20 | 5058943 | 5058944 | A | G | snv | GH/OmrMcwi (MCW), WKY/N (KNAW) |
| 20 | 5058950 | 5058951 | A | C | snv | WKY/N (KNAW), GH/OmrMcwi (MCW) |
| 20 | 5058953 | 5058954 | A | G | snv | FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), SS/JrHsdMcwi (MDC), SS/JrHsdMcwi (MCW) |
| 20 | 5058954 | 5058955 | T | G | snv | LCR/2Mco (UMich), LCR/1Mco (UMich), FHL/EurMcwi (MCW), SS/JrHsdMcwi (MCW), HCR/1Mco (UMich) |
| 20 | 5058972 | 5058973 | G | T | snv | COP/CrCrl (MCW & UW) |
| 20 | 5058992 | 5058993 | C | T | snv | SS/JrHsdMcwi (MDC) |
| 20 | 5059134 | 5059135 | A | G | snv | F344/NRrrc (KNAW) |
| 20 | 5059174 | 5059175 | C | G | snv | SS/JrHsdMcwi (MCW) |
| 20 | 5059418 | 5059419 | A | G | snv | MR/N (KNAW), FHL/EurMcwi (MCW) |
| 20 | 5059660 | 5059661 | G | A | snv | FHH/EurMcwi (MDC) |
Additional Information
External Database Links| Database | Acc Id | Source(s) |
| AGR Gene | RGD:1595924 | AgrOrtholog |
| Ensembl Genes | ENSRNOG00000038999 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
| Ensembl Protein | ENSRNOP00000039088 | UniProtKB/TrEMBL |
| ENSRNOP00000071804 | UniProtKB/TrEMBL | |
| ENSRNOP00000072208 | UniProtKB/TrEMBL | |
| ENSRNOP00000073206 | UniProtKB/TrEMBL | |
| ENSRNOP00000074602 | UniProtKB/TrEMBL | |
| ENSRNOP00000075633 | ENTREZGENE, UniProtKB/TrEMBL | |
| Ensembl Transcript | ENSRNOT00000041590 | UniProtKB/TrEMBL |
| ENSRNOT00000078972 | ENTREZGENE, UniProtKB/TrEMBL | |
| ENSRNOT00000080900 | UniProtKB/TrEMBL | |
| ENSRNOT00000081240 | UniProtKB/TrEMBL | |
| ENSRNOT00000082538 | UniProtKB/TrEMBL | |
| ENSRNOT00000089306 | UniProtKB/TrEMBL | |
| Gene3D-CATH | 2.60.40.10 | UniProtKB/TrEMBL |
| 3.30.500.10 | UniProtKB/TrEMBL | |
| InterPro | Ig-like | UniProtKB/TrEMBL |
| Ig-like_dom_sf | UniProtKB/TrEMBL | |
| Ig-like_fold | UniProtKB/TrEMBL | |
| Ig/MHC_CS | UniProtKB/TrEMBL | |
| Ig_C1-set | UniProtKB/TrEMBL | |
| MHC_I-like_Ag-recog | UniProtKB/TrEMBL | |
| MHC_I-like_Ag-recog_sf | UniProtKB/TrEMBL | |
| MHC_I/II-like_Ag-recog | UniProtKB/TrEMBL | |
| MHC_I_a_a1/a2 | UniProtKB/TrEMBL | |
| MHC_I_a_C | UniProtKB/TrEMBL | |
| KEGG Report | rno:24973 | UniProtKB/TrEMBL |
| NCBI Gene | 24973 | ENTREZGENE |
| Pfam | C1-set | UniProtKB/TrEMBL |
| MHC_I | UniProtKB/TrEMBL | |
| MHC_I_C | UniProtKB/TrEMBL | |
| PhenoGen | RT1-A1 | PhenoGen |
| PRINTS | MHCCLASSI | UniProtKB/TrEMBL |
| PROSITE | IG_LIKE | UniProtKB/TrEMBL |
| IG_MHC | UniProtKB/TrEMBL | |
| SMART | IGc1 | UniProtKB/TrEMBL |
| Superfamily-SCOP | MHC_I/II-like_Ag-recog | UniProtKB/TrEMBL |
| SSF48726 | UniProtKB/TrEMBL | |
| UniGene | Rn.233151 | ENTREZGENE |
| UniProt | A0A0G2K1E1_RAT | UniProtKB/TrEMBL |
| A0A0G2K2E1_RAT | UniProtKB/TrEMBL | |
| A0A0G2K4X1_RAT | UniProtKB/TrEMBL | |
| A0A0G2K8G8_RAT | UniProtKB/TrEMBL | |
| E9PSS8_RAT | UniProtKB/TrEMBL | |
| Q6MGB9 | ENTREZGENE, UniProtKB/TrEMBL |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2007-04-12 | RT1-A1 | RT1 class Ia, locus A1 | RT1-A1_mapped | RT1 class Ia, locus A1 (mapped) | Data Merged | 737654 | APPROVED |
| 2006-11-20 | RT1-A1 | RT1 class Ia, locus A1 | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
| 2006-11-20 | RT1-A1_mapped | RT1 class Ia, locus A1(mapped) | RT1-A1 | RT1 class Ia, locus A1 | Symbol set to symbol_mapped, name set to name (mapped) | 1582166 | APPROVED |
| 2004-02-13 | RT1-A1 | RT1 class Ia, locus A1 | RT1A-1 | RT1 class I gene (A-1) | Data Merged | 737654 | APPROVED |
| 2004-02-11 | RT1-A1 | RT1 class Ia, locus A1 | Symbol and Name status set to approved | 625702 | APPROVED | ||
| 2002-06-10 | RT1-A1 | RT1 class Ia, locus A (A1) | Symbol and Name status set to approved | 70586 | APPROVED |
 |
| More on RT1-A1 | |
|
Alliance Gene |
|
NCBI Gene |
|
Ensembl Gene |
|
|
JBrowse: rn5 rn6 |
|
NCBI Genome Data Viewer |
| RGD Object Information | |
| RGD ID: | 1595924 |
| Created: | 2006-11-20 |
| Species: | Rattus norvegicus |
| Last Modified: | 2020-08-20 |
| Status: | ACTIVE |
