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Gene: RT1-A1 (RT1 class Ia, locus A1) Rattus norvegicus
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Symbol: RT1-A1
Name: RT1 class Ia, locus A1
RGD ID: 1595924
Description: Exhibits beta-2-microglobulin binding activity and peptide binding activity. Involved in T cell tolerance induction; negative regulation of natural killer cell mediated cytotoxicity; and positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. Predicted to localize to external side of plasma membrane and extracellular space; PARTICIPATES IN allograft rejection pathway; antigen processing and presentation pathway; autoimmune thyroiditis pathway; INTERACTS WITH acetamide; ammonium chloride; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: RT1 class I gene (A-1); RT1 class Ia, A1n; RT1 class Ia, locus A (A1); RT1 class Ia, locus A1 (mapped); RT1-A1_mapped; RT1-A1n; RT1.A1(N); RT1A-1
Orthologs:
No known orthologs. homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,414,463 - 5,418,012 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,351,605 - 5,421,098 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,474,607 - 7,478,550 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4205,056,763 - 5,060,280 (+)NCBIRGSC3.4rn4RGSC3.4
Celera206,489,030 - 6,492,547 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on RT1-A1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1595924
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.