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Gene: Tnfrsf13c (TNF receptor superfamily member 13C) Rattus norvegicus
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Symbol: Tnfrsf13c
Name: TNF receptor superfamily member 13C
Description: Predicted to be involved in several processes, including positive regulation of germinal center formation; positive regulation of interferon-gamma biosynthetic process; and positive regulation of lymphocyte activation. Predicted to localize to the external side of plasma membrane. Human ortholog(s) of this gene implicated in common variable immunodeficiency. Orthologous to human TNFRSF13C (TNF receptor superfamily member 13C); PARTICIPATES IN cytokine mediated signaling pathway; primary immunodeficiency pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17beta-estradiol; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500910; RGD1560810; similar to tumor necrosis factor receptor superfamily, member 13c; tumor necrosis factor receptor superfamily member 13C; tumor necrosis factor receptor superfamily, member 13c
Orthologs:
Homo sapiens (human) : TNFRSF13C (TNF receptor superfamily member 13C)  HGNC  Alliance
Mus musculus (house mouse) : Tnfrsf13c (tumor necrosis factor receptor superfamily, member 13c)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnfrsf13c (TNF receptor superfamily member 13C)
Pan paniscus (bonobo/pygmy chimpanzee) : TNFRSF13C (TNF receptor superfamily member 13C)
Canis lupus familiaris (dog) : TNFRSF13C (TNF receptor superfamily member 13C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnfrsf13c (TNF receptor superfamily member 13C)
Sus scrofa (pig) : TNFRSF13C (TNF receptor superfamily member 13C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07123,453,799 - 123,456,289 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07123,438,591 - 123,439,975 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47120,596,571 - 120,597,836 (-)NCBIRGSC3.4rn4RGSC3.4
Celera7110,051,209 - 110,053,699 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tnfrsf13c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560810
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.