Cd55 (CD55 molecule (Cromer blood group))

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Gene: Cd55 (CD55 molecule (Cromer blood group)) Rattus norvegicus

Analyze

Symbol:

Cd55

Name:

CD55 molecule (Cromer blood group)

RGD ID:

620651

Description:

Enables enzyme inhibitor activity. Involved in several processes, including maternal process involved in parturition; negative regulation of complement activation; and response to peptide hormone. Located in apical plasma membrane. Used to study neuroblastoma and proteinuria. Human ortholog(s) of this gene implicated in prostate cancer and protein-losing enteropathy. Orthologous to human CD55 (CD55 molecule (Cromer blood group)); PARTICIPATES IN complement system pathway; coagulation cascade pathway; myocarditis pathway; INTERACTS WITH 1,3-dinitrobenzene; 17alpha-ethynylestradiol; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CD55 antigen; CD55 molecule, decay accelerating factor for complement; complement decay-accelerating factor; Daf; Daf1; decay accelarating factor 1; decay accelerating factor 1; decay accelerating factor GPI-form; decay-accelarating factor; glycosylphophatidylinositol-anchored form

RGD Orthologs

Alliance Genes

More Info

more info ...

Allele / Splice:

Cd55^em6Mcwi Cd55^em4Mcwi

Genetic Models:

SD-Cd55^em4Mcwi SD-Cd55^em6Mcwi

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	13	41,857,242 - 41,885,966 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	41,857,395 - 41,885,831 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	44,456,356 - 44,482,601 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	45,744,470 - 45,770,715 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	42,999,115 - 43,025,368 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	47,125,156 - 47,153,557 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	47,126,741 - 47,154,292 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	52,177,543 - 52,206,137 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	43,322,246 - 43,348,334 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	43,344,956 - 43,362,318 (-)	NCBI
Celera	13	42,209,852 - 42,236,220 (-)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amphetamine abuse (ISO)

autistic disorder (ISO)

breast cancer (ISO)

cervical cancer (ISO)

common variable immunodeficiency 7 (ISO)

endometrial adenocarcinoma (ISO)

endometriosis (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

Hypokalemic Periodic Paralysis, Type 1 (ISO)

inflammatory bowel disease (ISO)

neuroblastoma (IMP)

parathyroid carcinoma (ISO)

prostate cancer (ISO)

protein-losing enteropathy (ISO)

proteinuria (IMP)

Reperfusion Injury (IEP)

Viral Myocarditis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-anisomycin (ISO)

(-)-demecolcine (ISO)

1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

1,3-dinitrobenzene (EXP)

1-naphthyl isothiocyanate (ISO)

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

4-(ethoxymethylene)-2-phenyloxazol-5-one (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acetylsalicylic acid (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

AM-251 (ISO)

ammonium chloride (EXP)

amphetamine (EXP)

antimycin A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

azoxystrobin (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

butyric acid (EXP)

cadmium selenide (ISO)

cannabidiol (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

chlormequat chloride (EXP)

chloroprene (ISO)

chrysene (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

colforsin daropate hydrochloride (ISO)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

curcumin (ISO)

cyclosporin A (ISO)

deoxynivalenol (ISO)

dexamethasone (ISO)

dextran sulfate (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

diclofenac (ISO)

dicrotophos (ISO)

diethylstilbestrol (EXP)

diuron (EXP)

dopamine (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

Enterolactone (ISO)

etoposide (ISO)

fenoldopam (EXP)

flavonoids (EXP)

flutamide (EXP)

folic acid (ISO)

fulvestrant (ISO)

furan (EXP)

gentamycin (EXP)

indometacin (ISO)

ionomycin (ISO)

lead(0) (ISO)

leflunomide (ISO)

lipopolysaccharide (ISO)

mercury dichloride (ISO)

metam (ISO)

methamphetamine (ISO)

methidathion (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylisothiazolinone (ISO)

methylmercury chloride (ISO)

mitoxantrone (ISO)

N-methyl-4-phenylpyridinium (EXP,ISO)

niclosamide (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

phytoestrogen (ISO)

picoxystrobin (ISO)

pirinixic acid (ISO)

piroxicam (ISO)

potassium dichromate (ISO)

propanal (ISO)

quercetin (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sulfasalazine (EXP)

sunitinib (ISO)

T-2 toxin (ISO)

tamoxifen (ISO)

tebufenpyrad (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (EXP,ISO)

thapsigargin (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

toluene 2,4-diisocyanate (ISO)

torcetrapib (ISO)

Tributyltin oxide (ISO)

triptonide (ISO)

troglitazone (ISO)

tunicamycin (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vincristine (ISO)

zinc atom (ISO)

zinc(0) (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

maternal process involved in parturition (IEP)

negative regulation of complement activation (IDA,ISO)

positive regulation of CD4-positive, alpha-beta T cell activation (ISO)

positive regulation of CD4-positive, alpha-beta T cell proliferation (ISO)

positive regulation of cytosolic calcium ion concentration (ISO)

positive regulation of T cell cytokine production (ISO)

regulation of complement activation (ISO)

regulation of complement activation, classical pathway (ISO)

regulation of complement-dependent cytotoxicity (ISO)

regulation of lipopolysaccharide-mediated signaling pathway (ISO)

response to peptide hormone (IEP)

spermatogenesis (IEP)

viral entry into host cell (IEA)

Cellular Component

apical plasma membrane (IDA)

cell surface (ISO)

external side of plasma membrane (ISO)

membrane raft (ISO)

plasma membrane (ISO)

sperm midpiece (ISO)

Molecular Function

enzyme inhibitor activity (IDA)

lipid binding (ISO)

protein binding (ISO)

virus receptor activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

coagulation cascade pathway (IEA)

complement system pathway (IDA,IEA)

myocarditis pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Decay-accelerating factor expression in the rat kidney is restricted to the apical surface of podocytes.	Bao L, etal., Kidney Int. 2002 Dec;62(6):2010-21.
2.	Potent oncolytic activity of human enteroviruses against human prostate cancer.	Berry LJ, etal., Prostate. 2008 May 1;68(6):577-87.
3.	CD59 expressed on a tumor cell surface modulates decay-accelerating factor expression and enhances tumor growth in a rat model of human neuroblastoma.	Chen S, etal., Cancer Res. 2000 Jun 1;60(11):3013-8.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Decay-accelerating factor in the periovulatory rat ovary.	Gieske MC, etal., J Endocrinol. 2005 Aug;186(2):303-13.
6.	Gene expression profiling of rat uterus at different stages of parturition.	Girotti M and Zingg HH, Endocrinology. 2003 Jun;144(6):2254-65.
7.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
8.	Human and rodent decay-accelerating factors (CD55) are not species restricted in their complement-inhibiting activities.	Harris CL, etal., Immunology. 2000 Aug;100(4):462-70.
9.	Molecular cloning and functional characterization of the rat analogue of human decay-accelerating factor (CD55).	Hinchliffe SJ, etal., J Immunol 1998 Nov 15;161(10):5695-703.
10.	CD80 Regulates Th17 Cell Differentiation in Coxsackie Virus B3-Induced Acute Myocarditis.	Huang Y, etal., Inflammation. 2018 Feb;41(1):232-239. doi: 10.1007/s10753-017-0681-7.
11.	Prognostic significance of CD55 expression in breast cancer.	Ikeda J, etal., Clin Cancer Res. 2008 Aug 1;14(15):4780-6.
12.	Inhibition of decay-accelerating factor (CD55) attenuates prostate cancer growth and survival in vivo.	Loberg RD, etal., Neoplasia. 2006 Jan;8(1):69-78.
13.	Loss of CD55 is associated with aggressive breast tumors.	Madjd Z, etal., Clin Cancer Res. 2004 Apr 15;10(8):2797-803.
14.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
15.	Alternative exon usage in the 3' region of a single gene generates glycosylphosphatidylinositol-anchored and transmembrane forms of rat decay-accelerating factor.	Miwa T, etal., Immunogenetics 2000 Feb;51(2):129-37.
16.	CD55 in rat male reproductive tissue: differential expression in testis and expression of a unique truncated isoform on spermatozoa.	Mizuno M, etal., Mol Immunol. 2007 Mar;44(7):1613-22. Epub 2006 Sep 27.
17.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
18.	Expression of decay accelerating factor in endometrial adenocarcinoma is inversely related to the stage of tumor.	Nowicki S, etal., Am J Reprod Immunol. 2001 Aug;46(2):144-8.
19.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
20.	Immune complement and coagulation dysfunction in adverse outcomes of SARS-CoV-2 infection.	Ramlall V, etal., Nat Med. 2020 Aug 3. pii: 10.1038/s41591-020-1021-2. doi: 10.1038/s41591-020-1021-2.
21.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
22.	Expression of the complement regulatory proteins decay accelerating factor (DAF, CD55), membrane cofactor protein (MCP, CD46) and CD59 in the normal human uterine cervix and in premalignant and malignant cervical disease.	Simpson KL, etal., Am J Pathol. 1997 Nov;151(5):1455-67.
23.	Postconditioning attenuates renal ischemia-reperfusion injury by preventing DAF down-regulation.	Wang W, etal., J Urol. 2010 Jun;183(6):2424-31. Epub 2010 Apr 18.
24.	Coxsackievirus B3-associated myocardial pathology and viral load reduced by recombinant soluble human decay-accelerating factor in mice.	Yanagawa B, etal., Lab Invest. 2003 Jan;83(1):75-85.

Additional References at PubMed

PMID:6211481	PMID:7525274	PMID:8223854	PMID:9892684	PMID:11313396	PMID:12477932	PMID:12731067	PMID:15907827	PMID:16818763	PMID:17166698	PMID:17826908	PMID:18064521
PMID:18947875	PMID:19199708	PMID:19299737	PMID:20458337	PMID:23376485	PMID:23533145	PMID:24377861	PMID:25284781	PMID:27662796	PMID:28657829	PMID:33387103

Genomics

Comparative Map Data

Cd55
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	13	41,857,242 - 41,885,966 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	41,857,395 - 41,885,831 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	44,456,356 - 44,482,601 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	45,744,470 - 45,770,715 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	42,999,115 - 43,025,368 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	47,125,156 - 47,153,557 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	47,126,741 - 47,154,292 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	52,177,543 - 52,206,137 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	43,322,246 - 43,348,334 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	43,344,956 - 43,362,318 (-)	NCBI
Celera	13	42,209,852 - 42,236,220 (-)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

CD55
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	207,321,678 - 207,360,966 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	207,321,519 - 207,386,804 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	207,495,023 - 207,534,311 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	205,561,488 - 205,600,470 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	203,883,259 - 203,922,241	NCBI
Celera	1	180,747,405 - 180,786,905 (+)	NCBI		Celera
Cytogenetic Map	1	q32.2	NCBI
HuRef	1	178,191,283 - 178,230,783 (+)	NCBI		HuRef
CHM1_1	1	208,767,582 - 208,807,063 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	206,586,974 - 206,626,269 (+)	NCBI		T2T-CHM13v2.0

Cd55
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	130,357,526 - 130,390,513 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	130,366,764 - 130,390,481 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	130,429,798 - 130,465,009 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	130,439,027 - 130,462,744 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	132,335,606 - 132,359,317 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	132,267,758 - 132,290,230 (-)	NCBI		MGSCv36	mm8
Celera	1	133,067,523 - 133,091,208 (-)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	56.89	NCBI

Cd55
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955406	42,773,368 - 42,796,205 (+)	NCBI	ChiLan1.0	ChiLan1.0

CD55
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	1	41,981,330 - 42,020,548 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	182,923,369 - 182,962,518 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	187,201,195 - 187,240,350 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	187,201,081 - 187,240,350 (+)	Ensembl	panpan1.1		panPan2

CD55
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	6,361,037 - 6,396,063 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	6,360,964 - 6,386,226 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	5,923,634 - 5,949,508 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	6,049,135 - 6,075,038 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	6,049,143 - 6,077,363 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	5,982,465 - 6,008,341 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	6,084,489 - 6,110,584 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	6,125,081 - 6,150,968 (+)	NCBI		UU_Cfam_GSD_1.0

Cd55
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	68,104,286 - 68,123,978 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936557	5,344,373 - 5,364,234 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CD55
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	9	67,933,069 - 67,960,380 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	74,368,906 - 74,393,140 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	9	74,313,866 - 74,314,997 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CD55
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	22,055,138 - 22,092,472 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	22,073,629 - 22,092,173 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	22,674,151 - 22,711,583 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cd55
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624807	4,252,676 - 4,274,828 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Cd55
99 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	227
Count of miRNA genes:	155
Interacting mature miRNAs:	183
Transcripts:	ENSRNOT00000005284
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
738036	Lnnr4	Liver neoplastic nodule remodeling QTL 4	3.64		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	1	42356786	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	1	101056920	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	1	101056920	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	101056920	Rat
61339	Bp24	Blood pressure QTL 24		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	5994668	44807491	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	5994833	77046787	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	5994833	77046787	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	8897350	101631289	Rat
7411662	Foco29	Food consumption QTL 29	20.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	13	9313465	54313465	Rat
9589141	Insul28	Insulin level QTL 28	10.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	13	9313465	54313465	Rat
2317040	Aia21	Adjuvant induced arthritis QTL 21	2.75		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	9831541	54831541	Rat
2317046	Aia8	Adjuvant induced arthritis QTL 8	3.9700000286102295		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	9831541	54831541	Rat
1300163	Cardf1	Cardiac cell morphology QTL 1	4.18		aorta morphology trait (VT:0000272)	artery lesion measurement (CMO:0000975)	13	11929449	45417941	Rat
2302275	Gluco37	Glucose level QTL 37	3.8		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	13	11929449	46193066	Rat
631645	Bp121	Blood pressure QTL 121	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	14915655	59915655	Rat
9589164	Gluco66	Glucose level QTL 66	6.67	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	13	15158722	60158722	Rat
1331784	Bp222	Blood pressure QTL 222	2.944		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	17694436	53050594	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	20605871	101339738	Rat
61391	Bp5	Blood pressure QTL 5	5.6		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	22301875	67301875	Rat
70170	Eae14	Experimental allergic encephalomyelitis QTL 14		0.0024	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	23203448	68203448	Rat
6893338	Cm76	Cardiac mass QTL 76	0	0.99	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	23692969	68692969	Rat
1558644	Cm45	Cardiac mass QTL 45	3.6	0.002	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	13	23692969	68692969	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	30395351	101056920	Rat
2301962	Cm72	Cardiac mass QTL 72	4.12		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	13	31241331	58363171	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	31241331	93395974	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	32284471	77284471	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	34535218	79535218	Rat
2292232	Pur16	Proteinuria QTL 16	17.2		urine total protein amount (VT:0000032)	urine protein level (CMO:0000591)	13	36155723	41961389	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	37262092	82262092	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	37374509	82374509	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	37374509	82374509	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	37415584	80753406	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	37415584	82415584	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	38433408	83433408	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	39754544	84754544	Rat
2303032	Bp328	Blood pressure QTL 328			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	41184022	45417941	Rat

Markers in Region

RH132379

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	41,859,101 - 41,859,262 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	47,126,905 - 47,127,065	NCBI	Rnor6.0
Rnor_5.0	13	52,179,265 - 52,179,425	UniSTS	Rnor5.0
RGSC_v3.4	13	43,321,762 - 43,321,922	UniSTS	RGSC3.4
Celera	13	42,209,368 - 42,209,528	UniSTS
RH 3.4 Map	13	108.0	UniSTS
Cytogenetic Map	13	q13	UniSTS

RH139453

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	41,868,081 - 41,868,201 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	47,135,774 - 47,135,893	NCBI	Rnor6.0
Rnor_5.0	13	52,188,134 - 52,188,253	UniSTS	Rnor5.0
RGSC_v3.4	13	43,330,741 - 43,330,860	UniSTS	RGSC3.4
Celera	13	42,218,349 - 42,218,468	UniSTS
RH 3.4 Map	13	108.8	UniSTS
Cytogenetic Map	13	q13	UniSTS

RH141317

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	41,868,081 - 41,868,288 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	47,135,774 - 47,135,980	NCBI	Rnor6.0
Rnor_5.0	13	52,188,134 - 52,188,340	UniSTS	Rnor5.0
RGSC_v3.4	13	43,330,741 - 43,330,947	UniSTS	RGSC3.4
Celera	13	42,218,349 - 42,218,555	UniSTS
Cytogenetic Map	13	q13	UniSTS

Genetic Models

This gene Cd55 is modified in the following models/strains

SD-Cd55^em4Mcwi

SD-Cd55^em6Mcwi

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	6	16	16	4	16	4	6		10	23	11	4
Low		37	24	8	15	8	4	5	74	25	18		4
Below cutoff			17	17		17

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_022269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB026900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB026901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB026902	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB026903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB026904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB026905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB032395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB032396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB294577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB294578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC127764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF039583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF039584	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC061869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB610207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000005284 ⟹ ENSRNOP00000005284

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	41,858,928 - 41,885,795 (-)	Ensembl
Rnor_6.0 Ensembl	13	47,126,741 - 47,154,292 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000097302 ⟹ ENSRNOP00000079102

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	41,857,395 - 41,885,831 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000101971 ⟹ ENSRNOP00000078089

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	41,858,928 - 41,885,795 (-)	Ensembl

RefSeq Acc Id:

NM_022269 ⟹ NP_071605

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,859,586 - 41,885,831 (-)	NCBI
Rnor_6.0	13	47,127,278 - 47,153,521 (-)	NCBI
Rnor_5.0	13	52,177,543 - 52,206,137 (-)	NCBI
RGSC_v3.4	13	43,322,246 - 43,348,334 (-)	RGD
Celera	13	42,209,852 - 42,236,220 (-)	RGD

Sequence:

show sequence

TAACCCTGGCTCAAAACAGCTCCAGCCGCAGCCGGGCACCGTCTCTTCTACCTGGGGCTATGAT
CCGCACGCGGGCGCCGGGGACTCGGGCACCGCCGCCGCCGCCGCTGCTGCTGTCGCTGTCGCTG
CTGCTGCTGCTGCTGTCCCCGACTGTAAGCGGAGACTGCGGCCCACCTCCAGACATTCCTAATG
CCACGCCAAACTCGGGTAAACACACCAAGTTTGCCCACCAAAGCCAAGTGACATATTCGTGTAA
TAAGGGCTTCAAACAAATTCCAGACAAGCCAAACACAGTGGTCTGCCTTGAAAATGACCAATGG
TCTAACTACGAAACTTTCTGTAATAAAACCTGTAGTGCTCCACTGAGACTGAATTATGCATCCC
TCAAAAAGGAGTATCGTAACATGAATTTTTTCCCAATTGGCACCACTGTGGAATTTGAGTGTCG
GCCAGGATTTCAAAAAGTAACTTCACGCACAGGAAAATCAACTTGCCTTGAGGAATTAGTATGG
TCTCCAGTTGTTGAATTTTGTAAAAAAAGAGCATGCCCTAATCCTAGAGAACTGAAAAATGGTC
ACATCAACATACCAACTGACATATTATTCGGATCAGAAATAATCTTCTCATGCGACAAAGGGTA
CAAGCTGGTCGGTGTAACTTCTACATTCTGTTCTATTACGGGGAATGCTGTGGACTGGGATGAC
GTATTTCCAGTGTGCACAACAATTTTTTGTCCAGACCCACCAAAAATCAATAATGGAAGAATTC
GAGAGGAAAGCGACTCCTACGCATATAGACAGTCGGTGACCTATTCCTGTGACCAAGGCTTCAT
TCTGGTTGGAAATTCTTCCGTTCATTGTACTCTGAACGGTGAAGTAGGAGAATGGAGTAGTGCA
CCACCCAAGTGCATAGAGAGACACAAGGTCCCAACTAAGACCCCACCAGAAGTTGATATTCCAA
GTACAATGCCTCATGAATCCACCTTAATTAATTTTCCAAGTACAAGAGCCCCACTGTCTCATAA
ACCCACTACAGTTAAAGTTCCAGGTACAAGAGTCAAACCAACGTCTCACAAGCCCACTGAAGTT
AAAGTTCCAGCAACACAGCATGTACCTGTTTCCAAGACAACGGTACGTCATCCAACGAGAACAT
CTAAAGACAGAGGAGAGTCTAATTCAGGTGGTGACCATTTTATATATGGACATACATGTTTAAT
AACCATGACAATTTTGCATGTGATGCTCTTACTCACTGGCTAGTTGACGTAGCCAACGAAGAGT
TAAGAAGAAAGTATATACAACCACTGAGAATACTTCTAGTTTGTTAGAATGTCCAGGAAGAATG
GATACAATAAATTTAATAGTGTTGTTGGTTCTGTATGCTGTCATCGTCTTGAAGGTGTGCTAGA
AATGATAACAAAGCAAGAAGAAAGGAGGTTGTCTGGAATGGTCTTTTCAATGCATATAAGTCTC
TTGAAAATATTTCAAAACTAGACAAATTCACAATGTTGTGTAGTATCTTTTCTAAAAAAAAGTG
TGGGAAAGTGTAGAAAATTTTCAGGGGAGAGGGAAATCATGATTTCTTAGGCTAGATCTATCCT
GTTATTCTAGCTTACAATAAAAAATAGGAAGCTAAAAATACTGATGAGATTGCAAAAGTAAAAG
ACCCCAAACGAAATTTCCTTCCTTGTAAACCGAATTGCTAGAGCTGGGACATTCTTATTTAACC
CTTGACCTGAAGGCATTTTCCTTTCTACTCTGTATTGGCAAACTGTTATAAAGGAAGAGCATGC
TAACAAACCAGTAGTAGGACAGGAAAAGAGCTCACTTGGTGCAG

hide sequence

RefSeq Acc Id:

XM_006249717 ⟹ XP_006249779

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,866,378 - 41,885,889 (-)	NCBI
Rnor_6.0	13	47,135,701 - 47,153,550 (-)	NCBI
Rnor_5.0	13	52,177,543 - 52,206,137 (-)	NCBI

Sequence:

show sequence

CCCGCCCCGCCCCTCCGCAGCCATTCAATTAACCCTGGCTCAAAACAGCTCCAGCCGCAGCCGG
GCACCGTCTCTTCTACCTGGGGCTATGATCCGCACGCGGGCGCCGGGGACTCGGGCACCGCCGC
CGCCGCCGCTGCTGCTGTCGCTGTCGCTGCTGCTGCTGCTGCTGTCCCCGACTGTAAGCGGAGA
CTGCGGCCCACCTCCAGACATTCCTAATGCCACGCCAAACTCGGGTAAACACACCAAGTTTGCC
CACCAAAGCCAAGTGACATATTCGTGTAATAAGGGCTTCAAACAAATTCCAGACAAGCCAAACA
CAGTGGTCTGCCTTGAAAATGACCAATGGTCTAACTACGAAACTTTCTGTAATAAAACCTGTAG
TGCTCCACTGAGACTGAATTATGCATCCCTCAAAAAGGAGTATCGTAACATGAATTTTTTCCCA
ATTGGCACCACTGTGGAATTTGAGTGTCGGCCAGGATTTCAAAAAGTAACTTCACGCACAGGAA
AATCAACTTGCCTTGAGGAATTAGTATGGTCTCCAGTTGTTGAATTTTGTAAAAAAAGAGCATG
CCCTAATCCTAGAGAACTGAAAAATGGTCACATCAACATACCAACTGACATATTATTCGGATCA
GAAATAATCTTCTCATGCGACAAAGGGTACAAGCTGGTCGGTGTAACTTCTACATTCTGTTCTA
TTACGGGGAATGCTGTGGACTGGGATGACGTATTTCCAGTGTGCACAACAATTTTTTGTCCAGA
CCCACCAAAAATCAATAATGGAAGAATTCGAGAGGAAAGCGACTCCTACGCATATAGACAGTCG
GTGACCTATTCCTGTGACCAAGGCTTCATTCTGGTTGGAAATTCTTCCGTTCATTGTACTCTGA
ACGGTGAAGTAGGAGAATGGAGTAGTGCACCACCCAAGTGCATAGAGAGACACAAGGTCCCAAC
TAAGACCCCACCAGAAGTTGATATTCCAAGTACAATGCCTCATGAATCCACCTTAATTAATTTT
CCAAGTACAAGAGCCCCACTGTCTCATAAACCCACTACAGTTAAAGTTCCAGCAACACAGCATG
TACCTGTTTCCAAGACAACGGTACGTCATCCAACGAGAACATCTAAAGACAGAGGAGAGTCTAA
TTCAGGTGGTGACCATTTTATATATGGTAAGTTTGACCCACAGGGAGTTAAAAGAAATTGCCAT
CACTGTGGGAGACATAGTCCATATTTCTGGAAGAGAATCTTCTCTTATAACTGCCTGAGAAAAA
CTATCAAAATGCAGTGCCTATGGGTGCCTAAGGGCAGATGGGTAAAGCCTTTTAATCGGCTGGT
TTTTTGGACACCGTTAGGCATCCAGCATGGTCCTTCATATCCCCAACAGTGCTCCTGCTCTAAG
GCAGTCTTAGGACAGCTTCGGGTCATCTGGCCAATCAGTCAGGTAGCACTGAGTGCCCGCTGTG
TCAGTGTGTCATTTTAGTGACAGAAGAAACCCAGGAACAACAGTCAATACAGTTCTTATCCAAA
GAGCATAGTTAACGCCATCTCCAACCATTTTTAGGTCTCTGTCATAGGCCAAACGTGACCAAGA
GCCCCACTTTTCATTATATCTTTCCTTCATCTCTAGTAAAGCTTTTAAGCAGAGTTCTTTTAGA
ATATATTCTCTACATGCTAATATAGTCGGCGAAGGTACAAAACTGTCTCTGTGTTGTGATTCCT
TTTAGCATTTGGTCAGTATTTTTTCTTTGTACATTATACTTACTGTTACTTATTAATAAGGTCC
ACAAATCCCTGAACGAAATGGTAAGGGGCATTGTTAAGTGGGAAAATAGCCAAGTAGTGTACCA
AAGTCATGGGCGACTGTAAATACCCTTTCATGAAAAGATGTTTGTTTTAAAAAAATTTGTACTC
AACAGTGATACCCCCATTTTCATTCATGAAATGTATTAGCTAAGGGACACGCCCTGAAAACAGG
TACTCAGTTTCTACTGTTACCCTTACTGGTATTTGTCTCTCTCTTAGTTTATGTTTAAGCCAAA
GATTTCCTCAGAGGTAGCCCAGCAGGGGCAATTGCTTTTGTACATCTTCTATTTTAAATAGAAA
TAAATATGTTCTAAGCTCATGAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006249719 ⟹ XP_006249781

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,858,921 - 41,885,861 (-)	NCBI
Rnor_6.0	13	47,127,609 - 47,153,546 (-)	NCBI
Rnor_5.0	13	52,177,543 - 52,206,137 (-)	NCBI

Sequence:

show sequence

CCCCGCCCCTCCGCAGCCATTCAATTAACCCTGGCTCAAAACAGCTCCAGCCGCAGCCGGGCAC
CGTCTCTTCTACCTGGGGCTATGATCCGCACGCGGGCGCCGGGGACTCGGGCACCGCCGCCGCC
GCCGCTGCTGCTGTCGCTGTCGCTGCTGCTGCTGCTGCTGTCCCCGACTGTAAGCGGAGACTGC
GGCCCACCTCCAGACATTCCTAATGCCACGCCAAACTCGGGTAAACACACCAAGTTTGCCCACC
AAAGCCAAGTGACATATTCGTGTAATAAGGGCTTCAAACAAATTCCAGACAAGCCAAACACAGT
GGTCTGCCTTGAAAATGACCAATGGTCTAACTACGAAACTTTCTGTAATAAAACCTGTAGTGCT
CCACTGAGACTGAATTATGCATCCCTCAAAAAGGAGTATCGTAACATGAATTTTTTCCCAATTG
GCACCACTGTGGAATTTGAGTGTCGGCCAGGATTTCAAAAAGTAACTTCACGCACAGGAAAATC
AACTTGCCTTGAGGAATTAGTATGGTCTCCAGTTGTTGAATTTTGTAAAAAAAGAGCATGCCCT
AATCCTAGAGAACTGAAAAATGGTCACATCAACATACCAACTGACATATTATTCGGATCAGAAA
TAATCTTCTCATGCGACAAAGGGTACAAGCTGGTCGGTGTAACTTCTACATTCTGTTCTATTAC
GGGGAATGCTGTGGACTGGGATGACGTATTTCCAGTGTGCACAACAATTTTTTGTCCAGACCCA
CCAAAAATCAATAATGGAAGAATTCGAGAGGAAAGCGACTCCTACGCATATAGACAGTCGGTGA
CCTATTCCTGTGACCAAGGCTTCATTCTGGTTGGAAATTCTTCCGTTCATTGTACTCTGAACGG
TGAAGTAGGAGAATGGAGTAGTGCACCACCCAAGTGCATAGAGAGACACAAGGTCCCAACTAAG
ACCCCACCAGAAGTTGATATTCCAAGTACAATGCCTCATGAATCCACCTTAATTAATTTTCCAA
GTACAAGAGCCCCACTGTCTCATAAACCCACTACAGTTAAAGTTCCAGCAACACAGCATGTACC
TGTTTCCAAGACAACGGTACGTCATCCAACGAGAACATCTAAAGACAGAGGAGAGTCTAATTCA
GGTGGTGACCATTTTATATATGGACATACATGTTTAATAACCATGACAATTTTGCATGTGATGC
TCTTACTCACTGGCTAGTTGACGTAGCCAACGAAGAGTTAAGAAGAAAGTATATACAACCACTG
AGAATACTTCTAGTTTGTTAGAATGTCCAGGAAGAATGGATACAATAAATTTAATAGTGTTGTT
GGTTCTGTATGCTGTCATCGTCTTGAAGGTGTGCTAGAAATGATAACAAAGCAAGAAGAAAGGA
GGTTGTCTGGAATGGTCTTTTCAATGCATATAAGTCTCTTGAAAATATTTCAAAACTAGACAAA
TTCACAA

hide sequence

RefSeq Acc Id:

XM_006249723 ⟹ XP_006249785

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,857,242 - 41,885,945 (-)	NCBI
Rnor_6.0	13	47,125,156 - 47,153,557 (-)	NCBI
Rnor_5.0	13	52,177,543 - 52,206,137 (-)	NCBI

Sequence:

show sequence

CGAGAGCCCCGCCCCGCCCCTCCGCAGCCATTCAATTAACCCTGGCTCAAAACAGCTCCAGCCG
CAGCCGGGCACCGTCTCTTCTACCTGGGGCTATGATCCGCACGCGGGCGCCGGGGACTCGGGCA
CCGCCGCCGCCGCCGCTGCTGCTGTCGCTGTCGCTGCTGCTGCTGCTGCTGTCCCCGACTGTAA
GCGGAGACTGCGGCCCACCTCCAGACATTCCTAATGCCACGCCAAACTCGGGTAAACACACCAA
GTTTGCCCACCAAAGCCAAGTGACATATTCGTGTAATAAGGGCTTCAAACAAATTCCAGACAAG
CCAAACACAGTGGTCTGCCTTGAAAATGACCAATGGTCTAACTACGAAACTTTCTGTAATAAAA
CCTGTAGTGCTCCACTGAGACTGAATTATGCATCCCTCAAAAAGGAGTATCGTAACATGAATTT
TTTCCCAATTGGCACCACTGTGGAATTTGAGTGTCGGCCAGGATTTCAAAAAGTAACTTCACGC
ACAGGAAAATCAACTTGCCTTGAGGAATTAGTATGGTCTCCAGTTGTTGAATTTTGTAAAAAAA
GAGCATGCCCTAATCCTAGAGAACTGAAAAATGGTCACATCAACATACCAACTGACATATTATT
CGGATCAGAAATAATCTTCTCATGCGACAAAGGGTACAAGCTGGTCGGTGTAACTTCTACATTC
TGTTCTATTACGGGGAATGCTGTGGACTGGGATGACGTATTTCCAGTGTGCACAACAATTTTTT
GTCCAGACCCACCAAAAATCAATAATGGAAGAATTCGAGAGGAAAGCGACTCCTACGCATATAG
ACAGTCGGTGACCTATTCCTGTGACCAAGGCTTCATTCTGGTTGGAAATTCTTCCGTTCATTGT
ACTCTGAACGGTGAAGTAGGAGAATGGAGTAGTGCACCACCCAAGTGCATAGAGAGACACAAGG
TCCCAACTAAGACCCCACCAGAAGTTGATATTCCAACTACAGAGATCCCACCAACACCCCAGAA
AACCAACACAGCAGATGTCCCATCTACAGAGAGCCCACCAACACCTCAGAAAGCCAACACAGCA
GATGTCCCAGCTACAGAGATCCCACCAACAACGGTACGTCATCCAACGAGAACATCTAAAGACA
GAGGAGAGTCTAATTCAGGTGGTGACCATTTTATATATGGATTTGTTGCTGTTATTGTAACGAT
TGATAGCATAATTCTAATCAAAACTCTTTGGTGGACCATTTTAAGTTCAAACAGAAGCTCTGAC
TTGCAAGGAAAGAAGAAGAGGGAGAATGTCCCAGAGTAAGAAGAGAGCAAGAGTCCACACCATC
TTTTCAAGCTGTTTGGGTGTCTCCTGTGAATTAGATGACGGCTGCCCACATTGTGAGGTTGATC
TTTATTTACACTCCTGATTCCAATG

hide sequence

RefSeq Acc Id:

XM_008769498 ⟹ XP_008767720

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,858,921 - 41,885,907 (-)	NCBI
Rnor_6.0	13	47,127,609 - 47,153,547 (-)	NCBI

Sequence:

show sequence

GCCCCGCCCCTCCGCAGCCATTCAATTAACCCTGGCTCAAAACAGCTCCAGCCGCAGCCGGGCA
CCGTCTCTTCTACCTGGGGCTATGATCCGCACGCGGGCGCCGGGGACTCGGGCACCGCCGCCGC
CGCCGCTGCTGCTGTCGCTGTCGCTGCTGCTGCTGCTGCTGTCCCCGACTGTAAGCGGAGACTG
CGGCCCACCTCCAGACATTCCTAATGCCACGCCAAACTCGGGTAAACACACCAAGTTTGCCCAC
CAAAGCCAAGTGACATATTCGTGTAATAAGGGCTTCAAACAAATTCCAGACAAGCCAAACACAG
TGGTCTGCCTTGAAAATGACCAATGGTCTAACTACGAAACTTTCTGTAATAAAACCTGTAGTGC
TCCACTGAGACTGAATTATGCATCCCTCAAAAAGGAGTATCGTAACATGAATTTTTTCCCAATT
GGCACCACTGTGGAATTTGAGTGTCGGCCAGGATTTCAAAAAGTAACTTCACGCACAGGAAAAT
CAACTTGCCTTGAGGAATTAGTATGGTCTCCAGTTGTTGAATTTTGTAAAAAAAGAGCATGCCC
TAATCCTAGAGAACTGAAAAATGGTCACATCAACATACCAACTGACATATTATTCGGATCAGAA
ATAATCTTCTCATGCGACAAAGGGTACAAGCTGGTCGGTGTAACTTCTACATTCTGTTCTATTA
CGGGGAATGCTGTGGACTGGGATGACGTATTTCCAGTGTGCACAACAATTTTTTGTCCAGACCC
ACCAAAAATCAATAATGGAAGAATTCGAGAGGAAAGCGACTCCTACGCATATAGACAGTCGGTG
ACCTATTCCTGTGACCAAGGCTTCATTCTGGTTGGAAATTCTTCCGTTCATTGTACTCTGAACG
GTGAAGTAGGAGAATGGAGTAGTGCACCACCCAAGTGCATAGAGAGACACAAGGTCCCAACTAA
GACCCCACCAGAACATGGTTCATCTACAGAAATCCCACCAACACCTCAGAACGCCAACACAGCA
GATGTCCCATCTACAGAGATCCCACCAACACCTCAGAAAACCAACACAGCAAATCATATTACAG
CAACACAGCATGTACCTGTTTCCAAGACAACGGTACGTCATCCAACGAGAACATCTAAAGACAG
AGGAGAGTCTAATTCAGGTGGTGACCATTTTATATATGGACATACATGTTTAATAACCATGACA
ATTTTGCATGTGATGCTCTTACTCACTGGCTAGTTGACGTAGCCAACGAAGAGTTAAGAAGAAA
GTATATACAACCACTGAGAATACTTCTAGTTTGTTAGAATGTCCAGGAAGAATGGATACAATAA
ATTTAATAGTGTTGTTGGTTCTGTATGCTGTCATCGTCTTGAAGGTGTGCTAGAAATGATAACA
AAGCAAGAAGAAAGGAGGTTGTCTGGAATGGTCTTTTCAATGCATATAAGTCTCTTGAAAATAT
TTCAAAACTAGACAAATTCACAA

hide sequence

RefSeq Acc Id:

XM_017598923 ⟹ XP_017454412

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,857,281 - 41,885,863 (-)	NCBI
Rnor_6.0	13	47,125,176 - 47,153,546 (-)	NCBI

Sequence:

show sequence

CCCCGCCCCTCCGCAGCCATTCAATTAACCCTGGCTCAAAACAGCTCCAGCCGCAGCCGGGCAC
CGTCTCTTCTACCTGGGGCTATGATCCGCACGCGGGCGCCGGGGACTCGGGCACCGCCGCCGCC
GCCGCTGCTGCTGTCGCTGTCGCTGCTGCTGCTGCTGCTGTCCCCGACTGTAAGCGGAGACTGC
GGCCCACCTCCAGACATTCCTAATGCCACGCCAAACTCGGGTAAACACACCAAGTTTGCCCACC
AAAGCCAAGTGACATATTCGTGTAATAAGGGCTTCAAACAAATTCCAGACAAGCCAAACACAGT
GGTCTGCCTTGAAAATGACCAATGGTCTAACTACGAAACTTTCTGTAATAAAACCTGTAGTGCT
CCACTGAGACTGAATTATGCATCCCTCAAAAAGGAGTATCGTAACATGAATTTTTTCCCAATTG
GCACCACTGTGGAATTTGAGTGTCGGCCAGGATTTCAAAAAGTAACTTCACGCACAGGAAAATC
AACTTGCCTTGAGGAATTAGTATGGTCTCCAGTTGTTGAATTTTGTAAAAAAAGAGCATGCCCT
AATCCTAGAGAACTGAAAAATGGTCACATCAACATACCAACTGACATATTATTCGGATCAGAAA
TAATCTTCTCATGCGACAAAGGGTACAAGCTGGTCGGTGTAACTTCTACATTCTGTTCTATTAC
GGGGAATGCTGTGGACTGGGATGACGTATTTCCAGTGTGCACAACAATTTTTTGTCCAGACCCA
CCAAAAATCAATAATGGAAGAATTCGAGAGGAAAGCGACTCCTACGCATATAGACAGTCGGTGA
CCTATTCCTGTGACCAAGGCTTCATTCTGGTTGGAAATTCTTCCGTTCATTGTACTCTGAACGG
TGAAGTAGGAGAATGGAGTAGTGCACCACCCAAGTGCATAGAGAGACACAAGGTCCCAACTAAG
ACCCCACCAGAAGTTGATATTCCAAGTACAATGCCTCATGAATCCACCTTAATTAATTTTCCAA
GTACAAGAGCCCCACTGTCTCATAAACCCACTACAGTTAAAGTTCCAGGTACAAGAGTCAAACC
AACGTCTCACAAGCCCACTGAAGTTAAAGTTCCAGCAACACAGCATGTACCTGTTTCCAAGACA
ACGGTACGTCATCCAACGAGAACATCTAAAGACAGAGGAGAGTCTAATTCAGGTGGTGACCATT
TTATATATGGATTTGTTGCTGTTATTGTAACGATTGATAGCATAATTCTAATCAAAACTCTTTG
GTGGACCATTTTAAGTTCAAACAGAAGCTCTGACTTGCAAGGAAAGAAGAAGAGGGAGAATGTC
CCAGAGTAAGAAGAGAGCAAGAGTCCACACCATCTTTTCAAGCTGTTTGGGTGTCTCCTGTGAA
TTAGATGACGGCTGCCCACATTGTGAGGTTGATCTTTAT

hide sequence

RefSeq Acc Id:

XM_017598924 ⟹ XP_017454413

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,857,242 - 41,885,966 (-)	NCBI
Rnor_6.0	13	47,125,158 - 47,153,556 (-)	NCBI

Sequence:

show sequence

GAGAGCCCCGCCCCGCCCCTCCGCAGCCATTCAATTAACCCTGGCTCAAAACAGCTCCAGCCGC
AGCCGGGCACCGTCTCTTCTACCTGGGGCTATGATCCGCACGCGGGCGCCGGGGACTCGGGCAC
CGCCGCCGCCGCCGCTGCTGCTGTCGCTGTCGCTGCTGCTGCTGCTGCTGTCCCCGACTGTAAG
CGGAGACTGCGGCCCACCTCCAGACATTCCTAATGCCACGCCAAACTCGGGTAAACACACCAAG
TTTGCCCACCAAAGCCAAGTGACATATTCGTGTAATAAGGGCTTCAAACAAATTCCAGACAAGC
CAAACACAGTGGTCTGCCTTGAAAATGACCAATGGTCTAACTACGAAACTTTCTGTAATAAAAC
CTGTAGTGCTCCACTGAGACTGAATTATGCATCCCTCAAAAAGGAGTATCGTAACATGAATTTT
TTCCCAATTGGCACCACTGTGGAATTTGAGTGTCGGCCAGGATTTCAAAAAGTAACTTCACGCA
CAGGAAAATCAACTTGCCTTGAGGAATTAGTATGGTCTCCAGTTGTTGAATTTTGTAAAAAAAG
AGCATGCCCTAATCCTAGAGAACTGAAAAATGGTCACATCAACATACCAACTGACATATTATTC
GGATCAGAAATAATCTTCTCATGCGACAAAGGGTACAAGCTGGTCGGTGTAACTTCTACATTCT
GTTCTATTACGGGGAATGCTGTGGACTGGGATGACGTATTTCCAGTGTGCACAACAATTTTTTG
TCCAGACCCACCAAAAATCAATAATGGAAGAATTCGAGAGGAAAGCGACTCCTACGCATATAGA
CAGTCGGTGACCTATTCCTGTGACCAAGGCTTCATTCTGGTTGGAAATTCTTCCGTTCATTGTA
CTCTGAACGGTGAAGTAGGAGAATGGAGTAGTGCACCACCCAAGTGCATAGAGAGACACAAGGT
CCCAACTAAGACCCCACCAGAACATGGTTCATCTACAGAAATCCCACCAACACCTCAGAACGCC
AACACAGCAGATGTCCCATCTACAGAGATCCCACCAACACCTCAGAAAACCAACACAGCAAATC
ATATTACAGCAACACAGCATGTACCTGTTTCCAAGACAACGGTACGTCATCCAACGAGAACATC
TAAAGACAGAGGAGAGTCTAATTCAGGTGGTGACCATTTTATATATGGATTTGTTGCTGTTATT
GTAACGATTGATAGCATAATTCTAATCAAAACTCTTTGGTGGACCATTTTAAGTTCAAACAGAA
GCTCTGACTTGCAAGGAAAGAAGAAGAGGGAGAATGTCCCAGAGTAAGAAGAGAGCAAGAGTCC
ACACCATCTTTTCAAGCTGTTTGGGTGTCTCCTGTGAATTAGATGACGGCTGCCCACATTGTGA
GGTTGATCTTTATTTACACTCCTGATTCCAA

hide sequence

RefSeq Acc Id:

XM_039091062 ⟹ XP_038946990

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,857,268 - 41,885,872 (-)	NCBI

RefSeq Acc Id:

XM_039091063 ⟹ XP_038946991

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	41,857,289 - 41,885,571 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_071605	(Get FASTA)	NCBI Sequence Viewer
	XP_006249779	(Get FASTA)	NCBI Sequence Viewer
	XP_006249781	(Get FASTA)	NCBI Sequence Viewer
	XP_006249785	(Get FASTA)	NCBI Sequence Viewer
	XP_008767720	(Get FASTA)	NCBI Sequence Viewer
	XP_017454412	(Get FASTA)	NCBI Sequence Viewer
	XP_017454413	(Get FASTA)	NCBI Sequence Viewer
	XP_038946990	(Get FASTA)	NCBI Sequence Viewer
	XP_038946991	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC77438	(Get FASTA)	NCBI Sequence Viewer
	AAC77439	(Get FASTA)	NCBI Sequence Viewer
	AAH61869	(Get FASTA)	NCBI Sequence Viewer
	BAA88989	(Get FASTA)	NCBI Sequence Viewer
	BAA88990	(Get FASTA)	NCBI Sequence Viewer
	BAA88991	(Get FASTA)	NCBI Sequence Viewer
	BAA88992	(Get FASTA)	NCBI Sequence Viewer
	BAA88993	(Get FASTA)	NCBI Sequence Viewer
	BAA88994	(Get FASTA)	NCBI Sequence Viewer
	BAA92770	(Get FASTA)	NCBI Sequence Viewer
	BAA92771	(Get FASTA)	NCBI Sequence Viewer
	BAA92772	(Get FASTA)	NCBI Sequence Viewer
	BAF94240	(Get FASTA)	NCBI Sequence Viewer
	BAF94260	(Get FASTA)	NCBI Sequence Viewer
	EDM09864	(Get FASTA)	NCBI Sequence Viewer
	EDM09865	(Get FASTA)	NCBI Sequence Viewer
	EDM09866	(Get FASTA)	NCBI Sequence Viewer
	EDM09867	(Get FASTA)	NCBI Sequence Viewer
	EDM09868	(Get FASTA)	NCBI Sequence Viewer
	EDM09869	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_071605 ⟸ NM_022269
- Peptide Label:	precursor
- UniProtKB:	Q9Z0M0 (UniProtKB/TrEMBL), G3V6H8 (UniProtKB/TrEMBL), A0A9K3Y778 (UniProtKB/TrEMBL), A0A0G2QC50 (UniProtKB/TrEMBL), Q9QUN6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIRTRAPGTRAPPPPPLLLSLSLLLLLLSPTVSGDCGPPPDIPNATPNSGKHTKFAHQSQVTYS CNKGFKQIPDKPNTVVCLENDQWSNYETFCNKTCSAPLRLNYASLKKEYRNMNFFPIGTTVEFE CRPGFQKVTSRTGKSTCLEELVWSPVVEFCKKRACPNPRELKNGHINIPTDILFGSEIIFSCDK GYKLVGVTSTFCSITGNAVDWDDVFPVCTTIFCPDPPKINNGRIREESDSYAYRQSVTYSCDQG FILVGNSSVHCTLNGEVGEWSSAPPKCIERHKVPTKTPPEVDIPSTMPHESTLINFPSTRAPLS HKPTTVKVPGTRVKPTSHKPTEVKVPATQHVPVSKTTVRHPTRTSKDRGESNSGGDHFIYGHTC LITMTILHVMLLLTG hide sequence

RefSeq Acc Id:	XP_006249785 ⟸ XM_006249723
- Peptide Label:	isoform X6
- UniProtKB:	Q9QUN6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIRTRAPGTRAPPPPPLLLSLSLLLLLLSPTVSGDCGPPPDIPNATPNSGKHTKFAHQSQVTYS CNKGFKQIPDKPNTVVCLENDQWSNYETFCNKTCSAPLRLNYASLKKEYRNMNFFPIGTTVEFE CRPGFQKVTSRTGKSTCLEELVWSPVVEFCKKRACPNPRELKNGHINIPTDILFGSEIIFSCDK GYKLVGVTSTFCSITGNAVDWDDVFPVCTTIFCPDPPKINNGRIREESDSYAYRQSVTYSCDQG FILVGNSSVHCTLNGEVGEWSSAPPKCIERHKVPTKTPPEVDIPTTEIPPTPQKTNTADVPSTE SPPTPQKANTADVPATEIPPTTVRHPTRTSKDRGESNSGGDHFIYGFVAVIVTIDSIILIKTLW WTILSSNRSSDLQGKKKRENVPE hide sequence

RefSeq Acc Id:	XP_006249781 ⟸ XM_006249719
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2QC50 (UniProtKB/TrEMBL), A6IBY0 (UniProtKB/TrEMBL), Q9QUT3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIRTRAPGTRAPPPPPLLLSLSLLLLLLSPTVSGDCGPPPDIPNATPNSGKHTKFAHQSQVTYS CNKGFKQIPDKPNTVVCLENDQWSNYETFCNKTCSAPLRLNYASLKKEYRNMNFFPIGTTVEFE CRPGFQKVTSRTGKSTCLEELVWSPVVEFCKKRACPNPRELKNGHINIPTDILFGSEIIFSCDK GYKLVGVTSTFCSITGNAVDWDDVFPVCTTIFCPDPPKINNGRIREESDSYAYRQSVTYSCDQG FILVGNSSVHCTLNGEVGEWSSAPPKCIERHKVPTKTPPEVDIPSTMPHESTLINFPSTRAPLS HKPTTVKVPATQHVPVSKTTVRHPTRTSKDRGESNSGGDHFIYGHTCLITMTILHVMLLLTG hide sequence

RefSeq Acc Id:	XP_006249779 ⟸ XM_006249717
- Peptide Label:	isoform X1
- UniProtKB:	Q9Z0L9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIRTRAPGTRAPPPPPLLLSLSLLLLLLSPTVSGDCGPPPDIPNATPNSGKHTKFAHQSQVTYS CNKGFKQIPDKPNTVVCLENDQWSNYETFCNKTCSAPLRLNYASLKKEYRNMNFFPIGTTVEFE CRPGFQKVTSRTGKSTCLEELVWSPVVEFCKKRACPNPRELKNGHINIPTDILFGSEIIFSCDK GYKLVGVTSTFCSITGNAVDWDDVFPVCTTIFCPDPPKINNGRIREESDSYAYRQSVTYSCDQG FILVGNSSVHCTLNGEVGEWSSAPPKCIERHKVPTKTPPEVDIPSTMPHESTLINFPSTRAPLS HKPTTVKVPATQHVPVSKTTVRHPTRTSKDRGESNSGGDHFIYGKFDPQGVKRNCHHCGRHSPY FWKRIFSYNCLRKTIKMQCLWVPKGRWVKPFNRLVFWTPLGIQHGPSYPQQCSCSKAVLGQLRV IWPISQVALSARCVSVSF hide sequence

RefSeq Acc Id:	XP_008767720 ⟸ XM_008769498
- Peptide Label:	isoform X8
- UniProtKB:	Q9QUT3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIRTRAPGTRAPPPPPLLLSLSLLLLLLSPTVSGDCGPPPDIPNATPNSGKHTKFAHQSQVTYS CNKGFKQIPDKPNTVVCLENDQWSNYETFCNKTCSAPLRLNYASLKKEYRNMNFFPIGTTVEFE CRPGFQKVTSRTGKSTCLEELVWSPVVEFCKKRACPNPRELKNGHINIPTDILFGSEIIFSCDK GYKLVGVTSTFCSITGNAVDWDDVFPVCTTIFCPDPPKINNGRIREESDSYAYRQSVTYSCDQG FILVGNSSVHCTLNGEVGEWSSAPPKCIERHKVPTKTPPEHGSSTEIPPTPQNANTADVPSTEI PPTPQKTNTANHITATQHVPVSKTTVRHPTRTSKDRGESNSGGDHFIYGHTCLITMTILHVMLL LTG hide sequence

RefSeq Acc Id:	XP_017454413 ⟸ XM_017598924
- Peptide Label:	isoform X7
- UniProtKB:	A9CMA5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIRTRAPGTRAPPPPPLLLSLSLLLLLLSPTVSGDCGPPPDIPNATPNSGKHTKFAHQSQVTYS CNKGFKQIPDKPNTVVCLENDQWSNYETFCNKTCSAPLRLNYASLKKEYRNMNFFPIGTTVEFE CRPGFQKVTSRTGKSTCLEELVWSPVVEFCKKRACPNPRELKNGHINIPTDILFGSEIIFSCDK GYKLVGVTSTFCSITGNAVDWDDVFPVCTTIFCPDPPKINNGRIREESDSYAYRQSVTYSCDQG FILVGNSSVHCTLNGEVGEWSSAPPKCIERHKVPTKTPPEHGSSTEIPPTPQNANTADVPSTEI PPTPQKTNTANHITATQHVPVSKTTVRHPTRTSKDRGESNSGGDHFIYGFVAVIVTIDSIILIK TLWWTILSSNRSSDLQGKKKRENVPE hide sequence

RefSeq Acc Id:	XP_017454412 ⟸ XM_017598923
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZMB7 (UniProtKB/TrEMBL), A6IBX8 (UniProtKB/TrEMBL), Q9QUN6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIRTRAPGTRAPPPPPLLLSLSLLLLLLSPTVSGDCGPPPDIPNATPNSGKHTKFAHQSQVTYS CNKGFKQIPDKPNTVVCLENDQWSNYETFCNKTCSAPLRLNYASLKKEYRNMNFFPIGTTVEFE CRPGFQKVTSRTGKSTCLEELVWSPVVEFCKKRACPNPRELKNGHINIPTDILFGSEIIFSCDK GYKLVGVTSTFCSITGNAVDWDDVFPVCTTIFCPDPPKINNGRIREESDSYAYRQSVTYSCDQG FILVGNSSVHCTLNGEVGEWSSAPPKCIERHKVPTKTPPEVDIPSTMPHESTLINFPSTRAPLS HKPTTVKVPGTRVKPTSHKPTEVKVPATQHVPVSKTTVRHPTRTSKDRGESNSGGDHFIYGFVA VIVTIDSIILIKTLWWTILSSNRSSDLQGKKKRENVPE hide sequence

RefSeq Acc Id:

ENSRNOP00000005284 ⟸ ENSRNOT00000005284

RefSeq Acc Id:	XP_038946990 ⟸ XM_039091062
- Peptide Label:	isoform X3
- UniProtKB:	Q9QUT3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038946991 ⟸ XM_039091063
- Peptide Label:	isoform X5
- UniProtKB:	A6IBX9 (UniProtKB/TrEMBL), Q9QYJ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000078089 ⟸ ENSRNOT00000101971

RefSeq Acc Id:

ENSRNOP00000079102 ⟸ ENSRNOT00000097302

Protein Domains

Sushi

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2QC50-F1-model_v2	AlphaFold	A0A0G2QC50	1-382	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:620651	AgrOrtholog
BioCyc Gene	G2FUF-18375	BioCyc
Ensembl Genes	ENSRNOG00000003927	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000005284	ENTREZGENE
	ENSRNOP00000005284.7	UniProtKB/TrEMBL
	ENSRNOP00000078089.1	UniProtKB/TrEMBL
	ENSRNOP00000079102	ENTREZGENE
	ENSRNOP00000079102.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000005284	ENTREZGENE
	ENSRNOT00000005284.7	UniProtKB/TrEMBL
	ENSRNOT00000097302	ENTREZGENE
	ENSRNOT00000097302.1	UniProtKB/TrEMBL
	ENSRNOT00000101971.1	UniProtKB/TrEMBL
Gene3D-CATH	Complement Module, domain 1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:5598916	IMAGE-MGC_LOAD
InterPro	Sushi/SCR/CCP_sf	UniProtKB/TrEMBL
	Sushi_SCR_CCP	UniProtKB/TrEMBL
KEGG Report	rno:64036	UniProtKB/TrEMBL
MGC_CLONE	MGC:72267	IMAGE-MGC_LOAD
NCBI Gene	64036	ENTREZGENE
PANTHER	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	UniProtKB/TrEMBL
	COMPLEMENT DECAY-ACCELERATING FACTOR	UniProtKB/TrEMBL
Pfam	Sushi	UniProtKB/TrEMBL
PhenoGen	Cd55	PhenoGen
PROSITE	SUSHI	UniProtKB/TrEMBL
SMART	CCP	UniProtKB/TrEMBL
Superfamily-SCOP	Complement_control_module	UniProtKB/TrEMBL
UniProt	A0A0G2QC50	ENTREZGENE
	A0A8I5XWT0_RAT	UniProtKB/TrEMBL
	A0A8I5ZMB7	ENTREZGENE, UniProtKB/TrEMBL
	A0A9K3Y778	ENTREZGENE, UniProtKB/TrEMBL
	A6IBX8	ENTREZGENE, UniProtKB/TrEMBL
	A6IBX9	ENTREZGENE, UniProtKB/TrEMBL
	A6IBY0	ENTREZGENE, UniProtKB/TrEMBL
	A9CMA5	ENTREZGENE, UniProtKB/TrEMBL
	G3V6H8	ENTREZGENE
	Q9QUN6	ENTREZGENE, UniProtKB/TrEMBL
	Q9QUT3	ENTREZGENE, UniProtKB/TrEMBL
	Q9QYJ9	ENTREZGENE, UniProtKB/TrEMBL
	Q9Z0L9	ENTREZGENE, UniProtKB/TrEMBL
	Q9Z0M0	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A0G2QC50	UniProtKB/TrEMBL
	G3V6H8	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-02-02	Cd55	CD55 molecule, decay accelerating factor for complement	Cd55	Cd55 molecule	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-29	Cd55	Cd55 molecule	Cd55	CD55 antigen	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-22	Cd55	CD55 antigen	Daf1	decay accelarating factor 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-12-14	Daf1	decay accelarating factor 1	Daf	decay-accelarating factor	Symbol and Name updated	1299863	APPROVED
2002-08-07	Daf	decay-accelarating factor			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains four SCR domains and a serine/threonine rich-stretch that is heavily O glycosylated	632506
gene_protein	70-kDa glycosylphosphatidylinositol (GPI)-linked glycoprotein	632506

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)