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Gene: Clec4a (C-type lectin domain family 4, member A) Rattus norvegicus
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Symbol: Clec4a
Name: C-type lectin domain family 4, member A
Description: Predicted to have calcium ion binding activity and mannose binding activity. Predicted to be involved in several processes, including antigen processing and presentation of exogenous peptide antigen via MHC class I; negative regulation of tumor necrosis factor production; and plasmacytoid dendritic cell antigen processing and presentation. Predicted to localize to integral component of membrane and plasma membrane. Orthologous to human CLEC4A (C-type lectin domain family 4 member A).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 6; C-type lectin domain family 4 member A; C-type lectin superfamily member 6; Clecsf6; Dcir1; dendritic cell inhibitory receptor 1
Orthologs:
No known orthologs. homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04156,049,800 - 156,069,260 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4156,050,054 - 156,069,313 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04223,068,344 - 223,087,733 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44159,692,487 - 159,709,965 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14159,937,404 - 159,954,884 (+)NCBI
Celera4145,221,913 - 145,239,583 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated

Genomics

QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Clec4a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359662
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.