ONTOLOGY REPORT - ANNOTATIONS |
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Term: | protein-RNA complex assembly |
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Accession: | GO:0022618
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browse the term
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Definition: | The aggregation, arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. |
Synonyms: | exact_synonym: | RNP complex assembly; ribonucleoprotein complex assembly |
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G
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Ckap5
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cytoskeleton associated protein 5
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acts_upstream_of_or_within
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ISO
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MGI:2177650|MGI:5570192 (PMID:23936366)
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RGD |
PMID:23936366 |
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NCBI chr 3:77,491,195...77,593,300
Ensembl chr 3:77,491,276...77,593,264
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G
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Rpl38
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ribosomal protein L38
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004 Ensembl chr14:99,701,362...99,705,004 Ensembl chr 3:99,701,362...99,705,004 Ensembl chr 2:99,701,362...99,705,004 Ensembl chr16:99,701,362...99,705,004
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G
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Rpl38-ps8
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ribosomal protein L38, pseudogene 8
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 2:184,905,148...184,905,477
Ensembl chr 2:184,905,204...184,905,416 Ensembl chr16:184,905,204...184,905,416 Ensembl chr 3:184,905,204...184,905,416 Ensembl chr14:184,905,204...184,905,416
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G
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Rpl38l1
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ribosomal protein L38 like 1
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 4:60,296,358...60,296,687
Ensembl chr 4:60,296,410...60,296,622
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G
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Rpl38l3
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ribosomal protein L38 like 3
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr X:68,969,607...68,969,819
Ensembl chr X:68,969,607...68,969,819
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G
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Rpl38l4
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ribosomal protein L38 like 4
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr18:67,435,131...67,435,363
Ensembl chr18:67,435,134...67,435,346
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G
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Rpl38l6
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ribosomal protein L38 like 6
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 3:143,285,738...143,286,894
Ensembl chr 3:143,286,247...143,286,435
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G
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Shq1
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SHQ1, H/ACA ribonucleoprotein assembly factor
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involved_in
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ISO IEA
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(PMID:19383767) GO_REF:0000107
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RGD Ensembl |
PMID:19383767 |
GO_REF:0000107 |
NCBI chr 4:133,213,357...133,305,586
Ensembl chr 4:133,213,361...133,305,586
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G
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Strap
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serine/threonine kinase receptor associated protein
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involved_in
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ISO IEA
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(PMID:33230114) GO_REF:0000107
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RGD Ensembl |
PMID:33230114 |
GO_REF:0000107 |
NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
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G
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Rpl38
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ribosomal protein L38
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acts_upstream_of_or_within
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ISO
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(PMID:21529712)
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RGD |
PMID:21529712 |
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NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004 Ensembl chr14:99,701,362...99,705,004 Ensembl chr 3:99,701,362...99,705,004 Ensembl chr 2:99,701,362...99,705,004 Ensembl chr16:99,701,362...99,705,004
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G
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Eif6
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eukaryotic translation initiation factor 6
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
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G
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Eif6-ps1
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eukaryotic translation initiation factor 6, pseudogene 1
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr14:81,584,117...81,585,052
Ensembl chr14:81,584,160...81,584,897
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G
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Nopchap1
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NOP protein chaperone 1
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involved_in
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ISO IEA IBA
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(PMID:33367824) GO_REF:0000107 GO_REF:0000002 GO_REF:0000033
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RGD Ensembl InterPro GO_Central |
PMID:33367824 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:20,353,626...20,359,685
Ensembl chr 7:20,353,634...20,359,690
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G
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Nufip1
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nuclear FMR1 interacting protein 1
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involved_in
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ISO IEA IBA
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(PMID:17636026) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:17636026 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr15:51,429,518...51,460,308
Ensembl chr15:51,429,549...51,460,310
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G
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Pih1d1
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PIH1 domain containing 1
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involved_in
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ISO IEA IBA
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(PMID:17636026) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:17636026 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
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G
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Pih1d2
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PIH1 domain containing 2
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 8:50,966,885...50,976,901
Ensembl chr 8:50,966,885...50,975,656
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G
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Ruvbl1
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RuvB-like AAA ATPase 1
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
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G
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Ruvbl1-ps1
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RuvB-like AAA ATPase 1, pseudogene 1
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr X:1,640,138...1,641,886
Ensembl chr X:1,640,300...1,641,811
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G
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Ruvbl2
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RuvB-like AAA ATPase 2
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342
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G
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Snu13
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small nuclear ribonucleoprotein 13
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involved_in
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ISO
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(PMID:11842104)
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RGD |
PMID:11842104 |
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NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872 Ensembl chr 1:113,565,295...113,570,872
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G
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Taf9
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TATA-box binding protein associated factor 9
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involved_in
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ISO
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(PMID:17636026)
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RGD |
PMID:17636026 |
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NCBI chr 2:33,528,388...33,532,395
Ensembl chr 2:31,794,142...31,798,769
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G
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Znhit6
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zinc finger, HIT-type containing 6
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involved_in
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ISO IEA IBA
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(PMID:17636026) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:17636026 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:234,486,686...234,517,952
Ensembl chr 2:234,486,704...234,517,960
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G
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Naf1
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nuclear assembly factor 1 ribonucleoprotein
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involved_in
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IEA IBA
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GO_REF:0000002 GO_REF:0000033
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InterPro GO_Central |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293
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G
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Shq1
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SHQ1, H/ACA ribonucleoprotein assembly factor
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involved_in
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IBA IEA
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GO_REF:0000033 GO_REF:0000002
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GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr 4:133,213,357...133,305,586
Ensembl chr 4:133,213,361...133,305,586
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G
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AABR07041140.1
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
Ensembl chr X:113,216,366...113,217,655
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G
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Dcdc2b
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doublecortin domain containing 2B
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 5:141,950,574...141,957,476
Ensembl chr 5:141,951,031...141,967,365
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G
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Eif3a
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eukaryotic translation initiation factor 3, subunit A
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involved_in
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ISO IEA IBA ISS
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(PMID:17581632) GO_REF:0000107 GO_REF:0000033 GO_REF:0000104 GO_REF:0000024
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RGD Ensembl GO_Central UniProt |
PMID:17581632 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 |
NCBI chr 1:259,902,767...259,932,976
Ensembl chr 1:259,902,680...259,932,976
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G
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Eif3b
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eukaryotic translation initiation factor 3, subunit B
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr12:14,196,403...14,220,865
Ensembl chr12:14,196,403...14,220,886
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G
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Eif3c
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eukaryotic translation initiation factor 3, subunit C
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 1:181,134,604...181,152,489
Ensembl chr 1:181,134,604...181,152,493
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G
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Eif3d
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eukaryotic translation initiation factor 3, subunit D
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involved_in
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IEA ISO
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GO_REF:0000104 (PMID:24092755) GO_REF:0000107 (PMID:17581632)
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UniProt RGD Ensembl |
PMID:17581632 PMID:24092755 |
GO_REF:0000104 GO_REF:0000107 |
NCBI chr 7:109,539,795...109,552,184
Ensembl chr 7:109,539,356...109,552,206
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G
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Eif3e
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eukaryotic translation initiation factor 3 subunit E
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 7:74,339,848...74,372,483
Ensembl chr 7:74,339,828...74,373,096
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G
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Eif3el1
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eukaryotic translation initiation factor 3, subunit E like 1
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 1:73,774,491...73,775,984
Ensembl chr 1:73,774,487...73,776,003
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G
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Eif3f
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eukaryotic translation initiation factor 3, subunit F
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 1:162,934,220...162,943,204
Ensembl chr 1:162,934,212...162,943,204
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G
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Eif3g
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eukaryotic translation initiation factor 3, subunit G
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 8:19,429,728...19,433,760
Ensembl chr 8:19,429,643...19,433,808
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G
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Eif3h
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eukaryotic translation initiation factor 3, subunit H
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 7:83,091,037...83,174,451
Ensembl chr 7:83,091,039...83,174,451
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G
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Eif3i
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eukaryotic translation initiation factor 3, subunit I
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 5:141,935,135...141,942,589
Ensembl chr 5:141,935,044...141,942,676
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G
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Eif3j
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eukaryotic translation initiation factor 3, subunit J
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 3:108,985,103...109,007,341
Ensembl chr 3:108,985,118...109,007,953
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G
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Eif3k
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eukaryotic translation initiation factor 3, subunit K
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 1:84,260,127...84,270,051
Ensembl chr 1:84,259,673...84,270,302
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G
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Eif3l
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eukaryotic translation initiation factor 3, subunit L
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 7:110,652,565...110,663,614
Ensembl chr 7:110,627,107...110,663,614
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G
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Eif3m
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eukaryotic translation initiation factor 3, subunit M
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 3:91,424,754...91,442,358
Ensembl chr 3:91,416,325...91,442,392
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G
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Eif5
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eukaryotic translation initiation factor 5
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 6:130,589,162...130,597,656
Ensembl chr 6:130,589,143...130,597,656
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G
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Eif5-ps1
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eukaryotic translation initiation factor 5, pseudogene 1
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 3:53,566,365...53,569,726
Ensembl chr 3:53,566,757...53,568,645
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G
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ENSRNOG00000062798
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
Ensembl chr 7:46,723,073...46,724,355
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G
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Denr
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density regulated reinitiation and release factor
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involved_in
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ISO IEA IBA
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(PMID:20713520) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:20713520 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr12:32,662,512...32,685,283
Ensembl chr12:32,662,516...32,683,843
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G
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Dhx29
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DExH-box helicase 29
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involved_in
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ISO IEA
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(PMID:23047696) GO_REF:0000107
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RGD Ensembl |
PMID:23047696 |
GO_REF:0000107 |
NCBI chr 2:44,560,653...44,611,450
Ensembl chr 2:44,560,714...44,611,445
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G
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Eif2d
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eukaryotic translation initiation factor 2D
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involved_in
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ISO IEA IBA
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(PMID:20713520) GO_REF:0000107 GO_REF:0000033 GO_REF:0000002
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RGD Ensembl GO_Central InterPro |
PMID:20713520 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:42,615,901...42,637,107
Ensembl chr13:42,615,911...42,639,719
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G
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Eif2s3
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eukaryotic translation initiation factor 2 subunit gamma
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr X:58,916,513...58,939,923
Ensembl chr X:58,917,490...58,940,686
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G
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Eif2s3y
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eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr Y:869,654...889,341
Ensembl chr Y:869,689...889,340
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G
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Eif4h
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eukaryotic translation initiation factor 4H
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr12:22,083,155...22,099,876
Ensembl chr12:22,082,835...22,099,876
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G
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Eif5
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eukaryotic translation initiation factor 5
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IDA IMP
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RGD |
PMID:8464924 PMID:10805737 |
RGD:728212, RGD:10755758 |
NCBI chr 6:130,589,162...130,597,656
Ensembl chr 6:130,589,143...130,597,656
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G
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Mcts1
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MCTS1, re-initiation and release factor
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involved_in
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ISO IBA
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(PMID:20713520) GO_REF:0000033
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RGD GO_Central |
PMID:20713520 |
GO_REF:0000033 |
NCBI chr X:117,350,723...117,362,504
Ensembl chr X:117,350,889...117,362,504
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G
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Rps2
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ribosomal protein S2
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IMP
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RGD |
PMID:344063 |
RGD:2299070 |
NCBI chr10:13,747,316...13,749,165
Ensembl chr10:13,747,301...13,749,163
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G
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LOC134482366
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splicing factor YJU2-like
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
Ensembl chr16:21,108,942...21,109,883
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G
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Xab2
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XPA binding protein 2
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
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G
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Yju2
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YJU2 splicing factor
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involved_in
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IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
NCBI chr 9:789,603...799,505
Ensembl chr 9:789,606...799,496
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G
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Isy1
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ISY1 splicing factor homolog
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involved_in
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IEA IBA
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GO_REF:0000002 GO_REF:0000033
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InterPro GO_Central |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
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G
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Prpf18
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pre-mRNA processing factor 18
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979
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G
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Ddx28
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DEAD-box helicase 28
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involved_in
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ISO IEA IBA
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(PMID:25683715) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:25683715 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr19:33,909,799...33,911,729
Ensembl chr19:33,909,801...33,911,742
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G
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Dhx30
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DExH-box helicase 30
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involved_in
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ISO IEA ISS
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(PMID:25683715) GO_REF:0000107 GO_REF:0000024
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RGD Ensembl UniProt |
PMID:25683715 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:110,064,751...110,096,954
Ensembl chr 8:110,064,752...110,097,381
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G
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Fastkd2
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FAST kinase domains 2
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involved_in
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ISO ISS
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(PMID:25683715) GO_REF:0000024
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RGD UniProt |
PMID:25683715 |
GO_REF:0000024 |
NCBI chr 9:65,166,148...65,188,184
Ensembl chr 9:65,168,228...65,188,174
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G
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LOC134479940
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mitochondrial ribosome and complex I assembly factor AltMIEF1
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involved_in
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ISO
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(PMID:31666358)
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RGD |
PMID:31666358 |
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Ensembl chr 7:111,786,726...111,792,148
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G
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Mief1
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mitochondrial elongation factor 1
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involved_in
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ISO
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(PMID:31666358)
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RGD |
PMID:31666358 |
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NCBI chr 7:111,786,630...111,802,220
Ensembl chr 7:111,786,709...111,802,220
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G
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Mrm2
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mitochondrial rRNA methyltransferase 2
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involved_in
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ISO IEA
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(PMID:35177605) GO_REF:0000107
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RGD Ensembl |
PMID:35177605 |
GO_REF:0000107 |
NCBI chr12:14,309,556...14,314,759
Ensembl chr12:14,251,941...14,314,118
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G
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Mtg1
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mitochondrial ribosome-associated GTPase 1
|
involved_in
|
ISO IEA
|
(PMID:30085276) GO_REF:0000107
|
RGD Ensembl |
PMID:30085276 |
GO_REF:0000107 |
NCBI chr 1:194,931,543...194,944,278
Ensembl chr 1:194,931,531...194,944,277
|
|
G
|
Mtg2
|
mitochondrial ribosome-associated GTPase 2
|
involved_in
|
ISO IEA
|
(PMID:32652011) GO_REF:0000107
|
RGD Ensembl |
PMID:32652011 |
GO_REF:0000107 |
NCBI chr 3:167,165,542...167,181,358
Ensembl chr 3:167,165,982...167,181,358
|
|
G
|
Rcc1l
|
RCC1 like
|
involved_in
|
ISO
|
(PMID:32735630) (PMID:27667664)
|
RGD |
PMID:27667664 PMID:32735630 |
|
NCBI chr12:22,543,125...22,574,042
Ensembl chr12:22,543,734...22,574,036
|
|
|
G
|
Mcat
|
malonyl-CoA-acyl carrier protein transacylase
|
involved_in
|
ISO IEA
|
(PMID:36482135) GO_REF:0000107
|
RGD Ensembl |
PMID:36482135 |
GO_REF:0000107 |
NCBI chr 7:116,573,632...116,585,767
Ensembl chr 7:114,693,612...114,704,542
|
|
G
|
Mettl17
|
methyltransferase like 17
|
involved_in
|
ISO
|
(PMID:36482135), (PMID:38199006)
|
RGD |
PMID:36482135 PMID:38199006 |
|
NCBI chr15:24,582,296...24,589,029
Ensembl chr15:24,582,406...24,589,026
|
|
G
|
Rcc1l
|
RCC1 like
|
involved_in
|
ISO
|
(PMID:32735630)
|
RGD |
PMID:32735630 |
|
NCBI chr12:22,543,125...22,574,042
Ensembl chr12:22,543,734...22,574,036
|
|
|
G
|
Isy1
|
ISY1 splicing factor homolog
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
|
|
G
|
Slu7
|
SLU7 homolog, splicing factor
|
involved_in
|
ISO IEA ISS
|
(PMID:15728250) GO_REF:0000107 PMID:15181151
|
RGD Ensembl |
PMID:15728250 PMID:15181151 |
GO_REF:0000107, RGD:1304333 |
NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
|
|
|
G
|
ENSRNOG00000066758
|
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002 GO_REF:0000104
|
GO_Central InterPro UniProt |
|
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 |
Ensembl chr X:14,995,412...14,996,454
|
|
G
|
LOC120099250
|
U1 small nuclear ribonucleoprotein C-like
|
involved_in
|
IEA
|
GO_REF:0000104 GO_REF:0000002
|
UniProt InterPro |
|
GO_REF:0000002 GO_REF:0000104 |
NCBI chr X:135,673,708...135,678,865
Ensembl chr X:135,677,760...135,678,704
|
|
G
|
Prpf39
|
pre-mRNA processing factor 39
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 6:83,088,981...83,113,826
Ensembl chr 6:83,088,986...83,113,825
|
|
G
|
Psip1
|
PC4 and SRSF1 interacting protein 1
|
involved_in
|
ISO IEA ISS
|
(PMID:9885563) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:9885563 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257
|
|
G
|
Sfswap
|
splicing factor SWAP
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:8940107)
|
GO_Central Ensembl RGD |
PMID:8940107 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
|
|
G
|
Snrpc
|
small nuclear ribonucleoprotein polypeptide C
|
involved_in
|
IEA IBA
|
GO_REF:0000104 GO_REF:0000002 GO_REF:0000033
|
UniProt InterPro GO_Central |
|
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 |
NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638 Ensembl chr10:5,888,453...5,906,638
|
|
G
|
Srsf1
|
serine and arginine rich splicing factor 1
|
involved_in
|
ISO IEA
|
(PMID:8940107), (PMID:9885563) GO_REF:0000107
|
RGD Ensembl |
PMID:8940107 PMID:9885563 |
GO_REF:0000107 |
NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
|
|
G
|
Srsf12
|
serine and arginine rich splicing factor 12
|
involved_in
|
ISO IEA
|
(PMID:11684676) GO_REF:0000107
|
RGD Ensembl |
PMID:11684676 |
GO_REF:0000107 |
NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
|
|
|
G
|
Celf1
|
CUGBP, Elav-like family member 1
|
involved_in acts_upstream_of_or_within
|
ISO IEA IBA
|
(PMID:11158314) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:11158314 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
|
|
G
|
Celf2
|
CUGBP, Elav-like family member 2
|
involved_in acts_upstream_of_or_within
|
ISO IBA
|
(PMID:11158314) GO_REF:0000033
|
RGD GO_Central |
PMID:11158314 |
GO_REF:0000033 |
NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333
|
|
G
|
Celf3
|
CUGBP, Elav-like family member 3
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
|
|
G
|
Celf4
|
CUGBP, Elav-like family member 4
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:11158314) GO_REF:0000107
|
RGD Ensembl |
PMID:11158314 |
GO_REF:0000107 |
NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
|
|
G
|
Celf5
|
CUGBP, Elav-like family member 5
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322
|
|
G
|
Celf6
|
CUGBP, Elav-like family member 6
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041
|
|
G
|
Khdc4
|
KH domain containing 4, pre-mRNA splicing factor
|
involved_in
|
ISO IEA
|
(PMID:19641227) GO_REF:0000107
|
RGD Ensembl |
PMID:19641227 |
GO_REF:0000107 |
NCBI chr 2:174,149,059...174,177,816
Ensembl chr 2:174,149,141...174,177,504
|
|
G
|
Luc7l
|
LUC7-like
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112
|
|
G
|
Luc7l2
|
LUC7-like 2 pre-mRNA splicing factor
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000104 GO_REF:0000002
|
GO_Central UniProt InterPro |
|
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 |
NCBI chr 4:67,287,593...67,347,986
Ensembl chr 4:67,287,640...67,347,964
|
|
G
|
Luc7l3
|
LUC7-like 3 pre-mRNA splicing factor
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr10:79,240,050...79,276,555
Ensembl chr10:79,240,563...79,276,538
|
|
G
|
Luc7l3-ps2
|
LUC7-like 3 pre-mRNA splicing factor, pseudogene 2
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr 5:49,653,487...49,655,419
|
|
G
|
Matcap1
|
microtubule associated tyrosine carboxypeptidase 1
|
involved_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr19:33,158,053...33,166,784
Ensembl chr19:33,158,056...33,166,445
|
|
G
|
Mbnl1
|
muscleblind-like splicing regulator 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:3052922 (PMID:14671308), (PMID:16717059)
|
RGD |
PMID:14671308 PMID:16717059 |
|
NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
|
|
G
|
Nol3
|
nucleolar protein 3
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:10196175)
|
UniProt RGD |
PMID:10196175 |
GO_REF:0000024 |
NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
|
|
G
|
Ptbp2
|
polypyrimidine tract binding protein 2
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:4124189 (PMID:10829067), (PMID:22802532) GO_REF:0000107
|
RGD Ensembl |
PMID:10829067 PMID:22802532 |
GO_REF:0000107 |
NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
|
|
G
|
Puf60
|
poly-U binding splicing factor 60
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531
|
|
G
|
Rbmx
|
RNA binding motif protein, X-linked
|
|
IMP
|
|
RGD |
PMID:19282290 |
RGD:2316827 |
NCBI chr X:135,305,237...135,314,806
Ensembl chr X:135,305,325...135,314,743
|
|
G
|
Rbmxl1
|
Rbmx like 1
|
involved_in
|
IDA
|
PMID:19282290
|
UniProt |
PMID:19282290 |
RGD:2316827 |
NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
|
|
G
|
Setx
|
senataxin
|
involved_in
|
ISO IEA
|
(PMID:19515850) GO_REF:0000107
|
RGD Ensembl |
PMID:19515850 |
GO_REF:0000107 |
NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803
|
|
G
|
Srsf10
|
serine and arginine rich splicing factor 10
|
involved_in
|
ISO IEA
|
(PMID:9774382) GO_REF:0000107
|
RGD Ensembl |
PMID:9774382 |
GO_REF:0000107 |
NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
|
|
G
|
Srsf6
|
serine and arginine rich splicing factor 6
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:12549914)
|
UniProt Ensembl RGD |
PMID:12549914 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
|
|
G
|
Ythdc1
|
YTH N6-methyladenosine RNA binding protein C1
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:20167602)
|
UniProt Ensembl RGD |
PMID:20167602 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
|
|
|
G
|
Rpl13a
|
ribosomal protein L13A
|
involved_in
|
ISO IEA ISS
|
(PMID:17218275) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:17218275 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
|
|
|
G
|
Atm
|
ATM serine/threonine kinase
|
involved_in
|
ISO
|
(PMID:26586433)
|
RGD |
PMID:26586433 |
|
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
|
|
G
|
Atr
|
ATR serine/threonine kinase
|
involved_in
|
ISO IEA
|
(PMID:26586433) GO_REF:0000107
|
RGD Ensembl |
PMID:26586433 |
GO_REF:0000107 |
NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
|
|
|
G
|
Bop1
|
BOP1 ribosomal biogenesis factor
|
involved_in
|
ISO IEA
|
(PMID:24120868) GO_REF:0000107
|
RGD Ensembl |
PMID:24120868 |
GO_REF:0000107 |
NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
|
|
G
|
Brix1
|
biogenesis of ribosomes BRX1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:59,450,608...59,461,486
Ensembl chr 2:59,450,614...59,461,495
|
|
G
|
ENSRNOG00000068299
|
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr11:43,521,883...43,522,773
|
|
G
|
ENSRNOG00000070004
|
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr X:47,263,245...47,264,783
|
|
G
|
Mdn1
|
midasin AAA ATPase 1
|
involved_in
|
ISO IEA IBA
|
(PMID:27814492) GO_REF:0000107 GO_REF:0000002 GO_REF:0000033
|
RGD Ensembl InterPro GO_Central |
PMID:27814492 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 5:47,055,435...47,190,426
Ensembl chr 5:47,055,447...47,186,332
|
|
G
|
Mrto4
|
MRT4 homolog, ribosome maturation factor
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 5:151,601,780...151,608,533
Ensembl chr 5:151,601,780...151,608,287
|
|
G
|
Nop2
|
NOP2 nucleolar protein
|
involved_in
|
ISO IEA
|
(PMID:24120868) GO_REF:0000107
|
RGD Ensembl |
PMID:24120868 |
GO_REF:0000107 |
NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459
|
|
G
|
Nop53
|
NOP53 ribosome biogenesis factor
|
involved_in
|
ISO IEA IBA
|
(PMID:24120868) GO_REF:0000107 GO_REF:0000104 GO_REF:0000033
|
RGD Ensembl UniProt GO_Central |
PMID:24120868 |
GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 |
NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902
|
|
G
|
Rpf2
|
ribosome production factor 2 homolog
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr20:43,630,003...43,651,477
Ensembl chr20:43,629,951...43,651,509
|
|
G
|
Rpf2l1
|
ribosome production factor 2 homolog like 1
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 6:134,287,529...134,288,901
Ensembl chr 6:134,287,818...134,288,702
|
|
G
|
Rpl10l
|
ribosomal protein L10 like
|
involved_in
|
ISO IEA
|
(PMID:28502657) GO_REF:0000107
|
RGD Ensembl |
PMID:28502657 |
GO_REF:0000107 |
NCBI chr 6:84,544,771...84,545,791
Ensembl chr 6:84,543,540...84,545,816
|
|
G
|
Rpl11
|
ribosomal protein L11
|
involved_in
|
ISO IEA
|
(PMID:24120868) GO_REF:0000107
|
RGD Ensembl |
PMID:24120868 |
GO_REF:0000107 |
NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
|
|
G
|
Rpl24
|
ribosomal protein L24
|
acts_upstream_of_or_within
|
ISO
|
MGI:1856685 (PMID:15289434)
|
RGD |
PMID:15289434 |
|
NCBI chr11:44,653,937...44,659,346
Ensembl chr11:44,653,937...44,659,370
|
|
G
|
Rpl5
|
ribosomal protein L5
|
involved_in
|
ISO IBA
|
(PMID:24120868) GO_REF:0000033
|
RGD GO_Central |
PMID:24120868 |
GO_REF:0000033 |
NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
|
|
G
|
Rrs1
|
ribosome biogenesis regulator 1 homolog
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:24120868)
|
UniProt RGD |
PMID:24120868 |
GO_REF:0000024 |
NCBI chr 5:9,733,486...9,735,119
Ensembl chr 5:9,733,091...9,735,140
|
|
|
G
|
AABR07005506.1
|
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr 1:168,338,500...168,339,520
|
|
G
|
AABR07005886.1
|
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr 1:186,877,655...186,881,977
|
|
G
|
ENSRNOG00000070133
|
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr14:94,350,859...94,351,251
|
|
G
|
Eral1
|
Era-like 12S mitochondrial rRNA chaperone 1
|
involved_in
|
ISO IBA IEA ISS
|
(PMID:20604745), (PMID:28449065) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
|
RGD GO_Central Ensembl UniProt |
PMID:20604745 PMID:28449065 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:62,961,725...62,968,747
Ensembl chr10:62,961,730...62,968,994
|
|
G
|
Fau
|
FAU ubiquitin like and ribosomal protein S30 fusion
|
involved_in
|
ISO
|
(PMID:34318747)
|
RGD |
PMID:34318747 |
|
NCBI chr 1:203,350,226...203,351,741
Ensembl chr 1:203,350,189...203,351,742 Ensembl chr 1:203,350,189...203,351,742 Ensembl chr 6:203,350,189...203,351,742
|
|
G
|
LOC100911728
|
40S ribosomal protein S27-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr13:83,082,817...83,083,112
Ensembl chr13:83,082,817...83,083,056 Ensembl chr12:83,082,817...83,083,056
|
|
G
|
LOC108348601
|
40S ribosomal protein S19 pseudogene
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:84,754,704...84,755,185
Ensembl chr17:84,754,643...84,755,185
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|
G
|
LOC108353425
|
40S ribosomal protein S27-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:68,089,694...68,089,966
Ensembl chr12:28,077,660...28,078,131
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|
G
|
LOC120095010
|
40S ribosomal protein S19-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:2,641,423...2,645,350
Ensembl chr10:2,642,638...2,643,075
|
|
G
|
LOC120101650
|
40S ribosomal protein S14-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:112,838,842...112,839,309
Ensembl chr 3:112,838,854...112,839,309
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|
G
|
Mrps7
|
mitochondrial ribosomal protein S7
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:100,843,691...100,846,838
Ensembl chr10:100,843,356...100,847,129
|
|
G
|
Pwp2
|
PWP2, small subunit processome component
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:10,499,332...10,512,965
Ensembl chr20:10,499,363...10,513,640
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|
G
|
Rps10
|
ribosomal protein S10
|
|
IMP
|
|
RGD |
PMID:3378620 |
RGD:2299075 |
NCBI chr20:5,694,313...5,698,922
Ensembl chr20:5,694,313...5,699,044 Ensembl chr 6:5,694,313...5,699,044 Ensembl chr 6:5,694,313...5,699,044
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|
G
|
Rps14
|
ribosomal protein S14
|
involved_in
|
IMP IBA ISS
|
GO_REF:0000033 GO_REF:0000024
|
GO_Central UniProt RGD |
PMID:3378620 |
GO_REF:0000024 GO_REF:0000033, RGD:2299075 |
NCBI chr18:54,227,854...54,232,638
Ensembl chr18:54,227,854...54,233,166
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|
G
|
Rps15
|
ribosomal protein S15
|
involved_in
|
IMP IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:3378620 |
GO_REF:0000033, RGD:2299075 |
NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450 Ensembl chr 7:9,416,004...9,417,450
|
|
G
|
Rps19
|
ribosomal protein S19
|
involved_in
|
ISO IBA
|
(PMID:17053056) GO_REF:0000033
|
RGD GO_Central |
PMID:17053056 |
GO_REF:0000033 |
NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508 Ensembl chr 7:80,480,951...80,486,508
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|
G
|
Rps19l3
|
ribosomal protein S19-like 3
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:76,610,075...76,610,605
Ensembl chr 1:76,610,099...76,610,606 Ensembl chr 7:76,610,099...76,610,606
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|
G
|
Rps19l4
|
ribosomal protein S19 like 4
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:51,365,005...51,365,544
Ensembl chr 7:102,435,666...102,436,278
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|
G
|
Rps2
|
ribosomal protein S2
|
|
IMP
|
|
RGD |
PMID:3378620 |
RGD:2299075 |
NCBI chr10:13,747,316...13,749,165
Ensembl chr10:13,747,301...13,749,163
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|
G
|
Rps25
|
ribosomal protein s25
|
|
IMP
|
|
RGD |
PMID:3378620 |
RGD:2299075 |
NCBI chr 8:44,733,623...44,735,999
Ensembl chr 8:44,733,029...44,737,271 Ensembl chr 8:44,733,029...44,737,271
|
|
G
|
Rps27
|
ribosomal protein S27
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:175,665,858...175,666,963
Ensembl chr 2:175,665,853...175,666,964 Ensembl chr12:175,665,853...175,666,964
|
|
G
|
Rps27-ps7
|
ribosomal protein S27, pseudogene 7
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:186,877,655...186,877,923
Ensembl chr 1:186,877,655...186,881,977
|
|
G
|
Rps27-ps9
|
ribosomal protein S27, pseudogene 9
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:128,028,275...128,028,907
Ensembl chr 1:128,028,275...128,028,628
|
|
G
|
Rps27-ps9
|
ribosomal protein S27, pseudogene 9
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr 1:128,028,275...128,028,628
|
|
G
|
Rps27l
|
ribosomal protein S27-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418 Ensembl chr12:67,562,483...67,567,418 Ensembl chr 2:67,562,483...67,567,418
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|
G
|
Rps27l3
|
ribosomal protein S27 like 3
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 9:1,154,781...1,157,065
Ensembl chr 9:1,154,987...1,155,443 Ensembl chr12:1,154,987...1,155,443
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|
G
|
Rps28
|
ribosomal protein S28
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170 Ensembl chr16:14,607,801...14,609,170 Ensembl chr16:14,607,801...14,609,170
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|
G
|
Rps28-ps4
|
ribosomal protein S28, pseudogene 4
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:12,825,455...12,825,905
Ensembl chr20:12,825,606...12,825,815 Ensembl chr16:12,825,606...12,825,815
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|
G
|
Rps28-ps5
|
ribosomal protein S28, pseudogene 5
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:94,937,477...94,937,817
Ensembl chr14:94,937,482...94,937,815 Ensembl chr16:94,937,482...94,937,815
|
|
G
|
Rps5
|
ribosomal protein S5
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:73,538,776...73,543,073
Ensembl chr 1:73,538,776...73,543,073
|
|
G
|
Rps6
|
ribosomal protein S6
|
|
IMP
|
|
RGD |
PMID:3378620 |
RGD:2299075 |
NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602 Ensembl chr 5:101,371,136...101,374,602
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|
G
|
Rpsa
|
ribosomal protein SA
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000104
|
GO_Central UniProt |
|
GO_REF:0000033 GO_REF:0000104 |
NCBI chr 8:128,728,761...128,732,736
Ensembl chr 8:119,851,225...119,855,247
|
|
G
|
Rpsa-ps4
|
ribosomal protein SA, pseudogene 4
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:149,319,742...149,320,704
Ensembl chr X:149,319,178...149,320,639
|
|
G
|
Rrp7a
|
ribosomal RNA processing 7 homolog A
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:114,262,929...114,272,817
Ensembl chr 7:114,256,472...114,272,817
|
|
|
G
|
Adar
|
adenosine deaminase, RNA-specific
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:23622242) GO_REF:0000107
|
RGD Ensembl |
PMID:23622242 |
GO_REF:0000107 |
NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
|
|
G
|
Ago1
|
argonaute RISC component 1
|
involved_in
|
ISO IEA
|
(PMID:19966796) GO_REF:0000107
|
RGD Ensembl |
PMID:19966796 |
GO_REF:0000107 |
NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
|
|
G
|
Ago2
|
argonaute RISC catalytic component 2
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:19701182), (PMID:19966796), (PMID:23661684)
|
Ensembl RGD |
PMID:19701182 PMID:19966796 PMID:23661684 |
GO_REF:0000107 |
NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
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|
G
|
Ago3
|
argonaute RISC catalytic component 3
|
involved_in
|
ISO IEA
|
(PMID:19966796) GO_REF:0000107
|
RGD Ensembl |
PMID:19966796 |
GO_REF:0000107 |
NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
|
|
G
|
Ago4
|
argonaute RISC component 4
|
involved_in
|
ISO IEA
|
(PMID:19966796) GO_REF:0000107
|
RGD Ensembl |
PMID:19966796 |
GO_REF:0000107 |
NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632
|
|
G
|
Clp1
|
cleavage factor polyribonucleotide kinase subunit 1
|
involved_in
|
ISO IEA ISS
|
(PMID:17495927) GO_REF:0000107 GO_REF:0000104 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:17495927 |
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 |
NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421
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|
G
|
Dhx9
|
DExH-box helicase 9
|
involved_in
|
ISO IEA
|
(PMID:17531811) GO_REF:0000107
|
RGD Ensembl |
PMID:17531811 |
GO_REF:0000107 |
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
|
|
G
|
Dicer1
|
dicer 1 ribonuclease III
|
involved_in
|
ISO
|
(PMID:15973356), (PMID:18178619), (PMID:23661684)
|
RGD |
PMID:15973356 PMID:18178619 PMID:23661684 |
|
NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965
|
|
G
|
Prkra
|
protein activator of interferon induced protein kinase EIF2AK2
|
involved_in
|
ISO IEA
|
(PMID:23661684) GO_REF:0000107
|
RGD Ensembl |
PMID:23661684 |
GO_REF:0000107 |
NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347
|
|
G
|
Tarbp2
|
Tarbp2 subunit of RISC loading complex
|
involved_in
|
IEA ISO
|
GO_REF:0000104 GO_REF:0000107 (PMID:15973356), (PMID:18178619), (PMID:23661684)
|
UniProt Ensembl RGD |
PMID:15973356 PMID:18178619 PMID:23661684 |
GO_REF:0000104 GO_REF:0000107 |
NCBI chr 7:135,527,710...135,532,826
Ensembl chr 7:133,649,090...133,654,314
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|
|
G
|
Abt1
|
activator of basal transcription 1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
|
|
G
|
Prkdc
|
protein kinase, DNA-activated, catalytic subunit
|
involved_in
|
ISO
|
(PMID:32103174)
|
RGD |
PMID:32103174 |
|
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
|
|
G
|
Xrcc5
|
X-ray repair cross complementing 5
|
involved_in
|
ISO
|
(PMID:32103174)
|
RGD |
PMID:32103174 |
|
NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018
|
|
|
G
|
Crnkl1
|
crooked neck pre-mRNA splicing factor 1
|
involved_in
|
ISO IBA ISS
|
(PMID:12084575) GO_REF:0000033 GO_REF:0000024
|
RGD GO_Central UniProt |
PMID:12084575 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302 Ensembl chr 6:133,337,039...133,354,302
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|
G
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Ddx39b
|
DExD-box helicase 39B
|
involved_in
|
ISO IEA
|
(PMID:18593880) GO_REF:0000107
|
RGD Ensembl |
PMID:18593880 |
GO_REF:0000107 |
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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|
G
|
Gcfc2
|
GC-rich sequence DNA-binding factor 2
|
involved_in
|
ISO IEA
|
(PMID:24304693) GO_REF:0000107
|
RGD Ensembl |
PMID:24304693 |
GO_REF:0000107 |
NCBI chr 4:114,481,613...114,519,268
Ensembl chr 4:114,481,607...114,519,962
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|
G
|
Gemin2
|
gem (nuclear organelle) associated protein 2
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153
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|
G
|
Gemin6
|
gem (nuclear organelle) associated protein 6
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612
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|
G
|
Ncbp1
|
nuclear cap binding protein subunit 1
|
involved_in
|
ISO IEA
|
(PMID:23793891) GO_REF:0000107
|
RGD Ensembl |
PMID:23793891 |
GO_REF:0000107 |
NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
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|
G
|
Prpf19
|
pre-mRNA processing factor 19
|
involved_in
|
ISO IEA
|
(PMID:16332694) GO_REF:0000107
|
RGD Ensembl |
PMID:16332694 |
GO_REF:0000107 |
NCBI chr 1:216,966,104...216,977,549
Ensembl chr 1:207,541,595...207,552,662
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|
G
|
Rbm5
|
RNA binding motif protein 5
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:18951082)
|
UniProt Ensembl RGD |
PMID:18951082 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430
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|
G
|
Rsrp1
|
arginine and serine rich protein 1
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:34042961)
|
UniProt RGD |
PMID:34042961 |
GO_REF:0000024 |
NCBI chr 5:147,147,774...147,151,523
Ensembl chr 5:147,147,784...147,151,523
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|
G
|
Scaf11
|
SR-related CTD-associated factor 11
|
involved_in
|
ISO IEA IBA
|
(PMID:9447963) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:9447963 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:127,571,678...127,624,089
Ensembl chr 7:127,574,463...127,624,101
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|
G
|
Sf3a2
|
splicing factor 3A subunit 2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
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|
G
|
Sf3b1
|
splicing factor 3b, subunit 1
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
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|
G
|
Smn1
|
survival of motor neuron 1, telomeric
|
involved_in
|
ISO
|
(PMID:9845364)
|
RGD |
PMID:9845364 |
|
NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
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|
G
|
Srpk1
|
SRSF protein kinase 1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:6,645,809...6,682,448
Ensembl chr20:6,645,809...6,682,134
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|
G
|
Srpk2
|
SRSF protein kinase 2
|
involved_in
|
ISO IEA IBA
|
(PMID:9472028) GO_REF:0000107 (PMID:9446799) GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:9446799 PMID:9472028 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990
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|
G
|
Srpk3
|
SRSF protein kinase 3
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:151,510,452...151,515,208
Ensembl chr X:151,510,539...151,515,198
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|
G
|
U2af2
|
U2 small nuclear RNA auxiliary factor 2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
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|
G
|
Usp39
|
ubiquitin specific peptidase 39
|
involved_in
|
ISO IEA IBA
|
(PMID:11350945) GO_REF:0000107 GO_REF:0000002 GO_REF:0000033
|
RGD Ensembl InterPro GO_Central |
PMID:11350945 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359
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|
G
|
Zrsr2
|
zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
|
involved_in
|
ISO
|
(PMID:21041408)
|
RGD |
PMID:21041408 |
|
NCBI chr X:30,547,424...30,571,613
Ensembl chr X:30,547,536...30,570,125
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|
|
G
|
AABR07042226.1
|
|
involved_in
|
IEA
|
GO_REF:0000104
|
UniProt |
|
GO_REF:0000104 |
Ensembl chr X:144,806,986...144,812,552
|
|
G
|
Clns1a
|
chloride nucleotide-sensitive channel 1A
|
involved_in
|
ISS IEA IBA ISO
|
GO_REF:0000024 GO_REF:0000107 GO_REF:0000033 GO_REF:0000002 (PMID:18984161)
|
UniProt Ensembl GO_Central InterPro RGD |
PMID:18984161 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661
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|
G
|
Coil
|
coilin
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:73,789,077...73,810,378
Ensembl chr10:73,789,488...73,810,393
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|
G
|
Ddx20
|
DEAD-box helicase 20
|
involved_in
|
ISO IEA IBA
|
(PMID:12067652), (PMID:18984161) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:12067652 PMID:18984161 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:193,158,761...193,168,484
Ensembl chr 2:193,158,823...193,166,774
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G
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ENSRNOG00000063060
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involved_in
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IBA IEA
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GO_REF:0000033 GO_REF:0000002
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GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
Ensembl chr 6:84,273,587...84,274,496
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G
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ENSRNOG00000063333
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involved_in
|
IEA
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GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
Ensembl chr X:93,293,758...93,294,114
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G
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ENSRNOG00000063412
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|
involved_in
|
IBA
|
GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
Ensembl chr X:133,163,165...133,163,784
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G
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ENSRNOG00000064062
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|
involved_in
|
IBA IEA
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GO_REF:0000033 GO_REF:0000104
|
GO_Central UniProt |
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GO_REF:0000033 GO_REF:0000104 |
Ensembl chr19:33,454,456...33,455,388
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G
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ENSRNOG00000066758
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involved_in
|
IEA
|
GO_REF:0000104
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UniProt |
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GO_REF:0000104 |
Ensembl chr X:14,995,412...14,996,454
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G
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ENSRNOG00000068015
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|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
Ensembl chr X:133,878,251...133,878,959
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G
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ENSRNOG00000068876
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|
involved_in
|
IBA IEA
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GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
Ensembl chr 9:112,301,511...112,302,585
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|
G
|
Gemin2
|
gem (nuclear organelle) associated protein 2
|
involved_in
|
ISS IEA IBA ISO
|
GO_REF:0000024 GO_REF:0000107 GO_REF:0000002 GO_REF:0000033 (PMID:12067652), (PMID:18984161), (PMID:31799625)
|
UniProt Ensembl InterPro GO_Central RGD |
PMID:12067652 PMID:18984161 PMID:31799625 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153
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|
G
|
Gemin4
|
gem (nuclear organelle) associated protein 4
|
involved_in
|
ISO IEA
|
(PMID:12067652), (PMID:18984161) GO_REF:0000002 GO_REF:0000107
|
RGD InterPro Ensembl |
PMID:12067652 PMID:18984161 |
GO_REF:0000002 GO_REF:0000107 |
NCBI chr10:61,062,420...61,073,529
Ensembl chr10:61,066,425...61,073,431 Ensembl chr10:61,066,425...61,073,431
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|
G
|
Gemin5
|
gem (nuclear organelle) associated protein 5
|
involved_in
|
ISO IEA IBA
|
(PMID:12067652), (PMID:18984161) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:12067652 PMID:18984161 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892
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|
G
|
Gemin6
|
gem (nuclear organelle) associated protein 6
|
involved_in
|
ISO IEA IBA
|
(PMID:12067652), (PMID:18984161) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:12067652 PMID:18984161 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612
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|
G
|
Gemin7
|
gem (nuclear organelle) associated protein 7
|
involved_in
|
ISO IBA
|
(PMID:12067652), (PMID:18984161) GO_REF:0000033
|
RGD GO_Central |
PMID:12067652 PMID:18984161 |
GO_REF:0000033 |
NCBI chr 1:79,215,054...79,228,769
Ensembl chr 1:79,214,919...79,224,994
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|
G
|
Gemin7l1
|
gem (nuclear organelle) associated protein 7-like 1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:78,269,910...78,270,681
Ensembl chr 4:78,269,888...78,270,669
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|
G
|
Gemin8
|
gem (nuclear organelle) associated protein 8
|
involved_in
|
ISO IEA IBA
|
(PMID:12067652), (PMID:16434402), (PMID:18984161) GO_REF:0000002 GO_REF:0000033
|
RGD InterPro GO_Central |
PMID:12067652 PMID:16434402 PMID:18984161 |
GO_REF:0000002 GO_REF:0000033 |
NCBI chr X:28,259,806...28,278,641
Ensembl chr X:28,259,793...28,278,663
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|
G
|
LOC120099250
|
U1 small nuclear ribonucleoprotein C-like
|
involved_in
|
IEA
|
GO_REF:0000104
|
UniProt |
|
GO_REF:0000104 |
NCBI chr X:135,673,708...135,678,865
Ensembl chr X:135,677,760...135,678,704
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|
G
|
LOC120100604
|
small nuclear ribonucleoprotein G-like
|
involved_in
|
IEA
|
GO_REF:0000104
|
UniProt |
|
GO_REF:0000104 |
NCBI chr 2:186,400,521...186,402,953
Ensembl chr 2:186,400,857...186,401,087
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|
G
|
Lsm4
|
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
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|
G
|
Prmt5
|
protein arginine methyltransferase 5
|
involved_in
|
ISO IEA
|
(PMID:17709427) GO_REF:0000107
|
RGD Ensembl |
PMID:17709427 |
GO_REF:0000107 |
NCBI chr15:31,938,927...31,948,318
Ensembl chr15:27,968,910...27,978,296
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|
G
|
Prmt7
|
protein arginine methyltransferase 7
|
involved_in
|
ISO IEA ISS
|
(PMID:17709427) GO_REF:0000107 GO_REF:0000104 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:17709427 |
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 |
NCBI chr19:34,110,724...34,161,531
Ensembl chr19:34,110,747...34,162,577
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|
G
|
Prpf4b
|
pre-mRNA processing factor 4B
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:12077342)
|
UniProt RGD |
PMID:12077342 |
GO_REF:0000024 |
NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
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|
G
|
Sart3
|
spliceosome associated factor 3, U4/U6 recycling protein
|
involved_in NOT|involved_in
|
ISO IEA
|
(PMID:14749385), (PMID:15314151) GO_REF:0000107 (PMID:15314151)
|
RGD Ensembl |
PMID:14749385 PMID:15314151 |
GO_REF:0000107 |
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
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|
G
|
Smn1
|
survival of motor neuron 1, telomeric
|
involved_in
|
ISS IBA ISO
|
GO_REF:0000024 GO_REF:0000033 (PMID:12067652), (PMID:18984161)
|
UniProt GO_Central RGD |
PMID:12067652 PMID:18984161 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
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|
G
|
Snrpb
|
small nuclear ribonucleoprotein polypeptides B and B1
|
involved_in
|
ISO IEA ISS
|
(PMID:18984161) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:18984161 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
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|
G
|
Snrpc
|
small nuclear ribonucleoprotein polypeptide C
|
involved_in
|
ISO IEA
|
(PMID:8972845) GO_REF:0000104
|
RGD UniProt |
PMID:8972845 |
GO_REF:0000104 |
NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638 Ensembl chr10:5,888,453...5,906,638
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|
G
|
Snrpd1
|
small nuclear ribonucleoprotein D1 polypeptide
|
involved_in
|
ISO IEA
|
(PMID:18984161) GO_REF:0000107 GO_REF:0000104 GO_REF:0000002
|
RGD Ensembl UniProt InterPro |
PMID:18984161 |
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 |
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
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|
G
|
Snrpd2
|
small nuclear ribonucleoprotein D2 polypeptide
|
involved_in
|
ISO IBA
|
(PMID:18984161) GO_REF:0000033
|
RGD GO_Central |
PMID:18984161 |
GO_REF:0000033 |
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 Ensembl chr20:78,798,377...78,803,351
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|
G
|
Snrpd3
|
small nuclear ribonucleoprotein D3 polypeptide
|
involved_in
|
ISO IEA IBA
|
(PMID:18984161) GO_REF:0000002 GO_REF:0000104 GO_REF:0000033
|
RGD InterPro UniProt GO_Central |
PMID:18984161 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 |
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
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|
G
|
Snrpd3l1
|
small nuclear ribonucleoprotein D3 polypeptide like 1
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002 GO_REF:0000104
|
GO_Central InterPro UniProt |
|
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 |
NCBI chr19:12,396,026...12,396,454
Ensembl chr19:12,396,026...12,396,454
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|
G
|
Snrpe
|
small nuclear ribonucleoprotein polypeptide E
|
involved_in
|
ISO IEA IBA
|
(PMID:18984161) GO_REF:0000104 GO_REF:0000033
|
RGD UniProt GO_Central |
PMID:18984161 |
GO_REF:0000033 GO_REF:0000104 |
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
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|
G
|
Snrpepl2
|
small nuclear ribonucleoprotein polypeptide E like 2
|
involved_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000104
|
GO_Central UniProt |
|
GO_REF:0000033 GO_REF:0000104 |
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
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|
G
|
Snrpf
|
small nuclear ribonucleoprotein polypeptide F
|
involved_in
|
ISO IEA
|
(PMID:18984161) GO_REF:0000107
|
RGD Ensembl |
PMID:18984161 |
GO_REF:0000107 |
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
|
|
G
|
Snrpg
|
small nuclear ribonucleoprotein polypeptide G
|
involved_in
|
ISO IEA
|
(PMID:18984161) GO_REF:0000104
|
RGD UniProt |
PMID:18984161 |
GO_REF:0000104 |
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 Ensembl chr X:118,812,252...118,819,826
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|
G
|
Snrpgl1
|
small nuclear ribonucleoprotein polypeptide G like 1
|
involved_in
|
IEA
|
GO_REF:0000104
|
UniProt |
|
GO_REF:0000104 |
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
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|
G
|
Strap
|
serine/threonine kinase receptor associated protein
|
involved_in
|
ISS IEA IBA ISO
|
GO_REF:0000024 GO_REF:0000107 GO_REF:0000033 (PMID:12067652), (PMID:18984161)
|
UniProt Ensembl GO_Central RGD |
PMID:12067652 PMID:18984161 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
|
|
G
|
Tdrd6
|
tudor domain containing 6
|
involved_in
|
ISO
|
(PMID:28263986)
|
RGD |
PMID:28263986 |
|
NCBI chr 9:24,841,259...24,856,621
Ensembl chr 9:17,344,026...17,359,344
|
|
G
|
Tssc4
|
tumor suppressing subtransferable candidate 4
|
involved_in
|
ISO ISS
|
(PMID:35188580) GO_REF:0000024
|
RGD UniProt |
PMID:35188580 |
GO_REF:0000024 |
NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980
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|
|
G
|
Lsm2
|
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:10523320) GO_REF:0000107
|
RGD Ensembl |
PMID:10523320 |
GO_REF:0000107 |
NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
|
|
G
|
Prpf19
|
pre-mRNA processing factor 19
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:20595234)
|
UniProt Ensembl RGD |
PMID:20595234 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:216,966,104...216,977,549
Ensembl chr 1:207,541,595...207,552,662
|
|
G
|
Prpf3
|
pre-mRNA processing factor 3
|
involved_in
|
ISO IEA
|
(PMID:20595234) GO_REF:0000107
|
RGD Ensembl |
PMID:20595234 |
GO_REF:0000107 |
NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489
|
|
G
|
Prpf31
|
pre-mRNA processing factor 31
|
acts_upstream_of_or_within involved_in
|
ISO IEA
|
(PMID:11867543) GO_REF:0000002 GO_REF:0000107 (PMID:15257298), (PMID:20118938)
|
RGD InterPro Ensembl |
PMID:11867543 PMID:15257298 PMID:20118938 |
GO_REF:0000002 GO_REF:0000107 |
NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
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|
G
|
Prpf4b
|
pre-mRNA processing factor 4B
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:20118938)
|
UniProt RGD |
PMID:20118938 |
GO_REF:0000024 |
NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
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|
G
|
Prpf6
|
pre-mRNA processing factor 6
|
involved_in
|
IEA ISO ISS IBA
|
GO_REF:0000107 (PMID:15257298), (PMID:20118938) GO_REF:0000024 GO_REF:0000033
|
Ensembl RGD UniProt GO_Central |
PMID:15257298 PMID:20118938 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991
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|
G
|
Prpf8
|
pre-mRNA processing factor 8
|
involved_in
|
ISO IEA IBA
|
(PMID:20595234) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:20595234 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
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|
G
|
Sart3
|
spliceosome associated factor 3, U4/U6 recycling protein
|
involved_in
|
ISO IEA
|
(PMID:12032085), (PMID:20595234) GO_REF:0000107
|
RGD Ensembl |
PMID:12032085 PMID:20595234 |
GO_REF:0000107 |
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
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|
G
|
Tssc4
|
tumor suppressing subtransferable candidate 4
|
involved_in
|
ISO ISS
|
(PMID:34131137) GO_REF:0000024
|
RGD UniProt |
PMID:34131137 |
GO_REF:0000024 |
NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980
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|
G
|
Usp4
|
ubiquitin specific peptidase 4
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:20595234)
|
UniProt Ensembl RGD |
PMID:20595234 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:109,035,402...109,079,382
Ensembl chr 8:109,036,099...109,080,427
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|
|
G
|
Snrnp200
|
small nuclear ribonucleoprotein U5 subunit 200
|
involved_in
|
ISO IBA IEA
|
(PMID:35241646) GO_REF:0000033 GO_REF:0000107
|
RGD GO_Central Ensembl |
PMID:35241646 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182
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|
|
G
|
Dkc1
|
dyskerin pseudouridine synthase 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:3849598 (PMID:15240872)
|
RGD |
PMID:15240872 |
|
NCBI chr X:157,751,651...157,757,796
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|
G
|
Hsp90aa1
|
heat shock protein 90 alpha family class A member 1
|
involved_in
|
ISO IEA
|
(PMID:10197982) GO_REF:0000107
|
RGD Ensembl |
PMID:10197982 |
GO_REF:0000107 |
NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
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|
G
|
Hsp90ab1
|
heat shock protein 90 alpha family class B member 1
|
involved_in
|
ISO IEA
|
(PMID:10197982) GO_REF:0000107
|
RGD Ensembl |
PMID:10197982 |
GO_REF:0000107 |
NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
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|
G
|
Naf1
|
nuclear assembly factor 1 ribonucleoprotein
|
involved_in
|
ISO
|
(PMID:27510903)
|
RGD |
PMID:27510903 |
|
NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293
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|
G
|
Nvl
|
nuclear VCP-like
|
involved_in
|
ISO
|
(PMID:22226966)
|
RGD |
PMID:22226966 |
|
NCBI chr13:92,851,023...92,906,749
Ensembl chr13:92,853,650...92,906,049
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|
G
|
Ptges3
|
prostaglandin E synthase 3
|
involved_in
|
ISO IEA IBA
|
(PMID:10197982) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:10197982 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:490,698...507,759
Ensembl chr 7:490,656...508,084
|
|
G
|
Ptges3l1
|
prostaglandin E synthase 3-like 1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:42,215,200...42,224,472
Ensembl chr X:42,214,756...42,225,047
|
|
|
G
|
Ddx42
|
DEAD-box helicase 42
|
involved_in
|
ISO IEA
|
(PMID:36797247) GO_REF:0000107
|
RGD Ensembl |
PMID:36797247 |
GO_REF:0000107 |
NCBI chr10:91,148,926...91,180,940
Ensembl chr10:91,148,254...91,180,939
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|
G
|
Ddx46
|
DEAD-box helicase 46
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:36797247)
|
UniProt RGD |
PMID:36797247 |
GO_REF:0000024 |
NCBI chr17:8,942,070...8,988,440
Ensembl chr17:8,944,454...8,988,439
|
|
G
|
Htatsf1
|
HIV-1 Tat specific factor 1
|
involved_in
|
ISO IEA
|
(PMID:32494006), (PMID:34822310) GO_REF:0000107
|
RGD Ensembl |
PMID:32494006 PMID:34822310 |
GO_REF:0000107 |
NCBI chr X:134,935,426...134,949,607
Ensembl chr X:134,935,426...134,949,607
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|
G
|
Sf3a1
|
splicing factor 3A subunit 1
|
involved_in
|
ISO IEA
|
(PMID:10882114), (PMID:11533230) GO_REF:0000107
|
RGD Ensembl |
PMID:10882114 PMID:11533230 |
GO_REF:0000107 |
NCBI chr14:83,254,971...83,275,720
Ensembl chr14:79,031,394...79,052,144
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G
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Sf3a2
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splicing factor 3A subunit 2
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involved_in
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ISO IEA ISS
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(PMID:11533230) GO_REF:0000107 GO_REF:0000024
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RGD Ensembl UniProt |
PMID:11533230 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
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G
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Sf3a3
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splicing factor 3a, subunit 3
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involved_in
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ISO IEA
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(PMID:11533230) GO_REF:0000107
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RGD Ensembl |
PMID:11533230 |
GO_REF:0000107 |
NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361
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Term paths to the root
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