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Gene: Eif2d (eukaryotic translation initiation factor 2D) Rattus norvegicus
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Symbol: Eif2d
Name: eukaryotic translation initiation factor 2D
RGD ID: 1561765
Description: Predicted to have translation initiation factor activity. Predicted to be involved in IRES-dependent viral translational initiation; formation of translation preinitiation complex; and ribosome disassembly. Predicted to colocalize with cytosolic small ribosomal subunit. Orthologous to human EIF2D (eukaryotic translation initiation factor 2D); INTERACTS WITH bisphenol A; finasteride; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LGTN; ligatin; LOC498225; similar to ligatin
Orthologs:
Homo sapiens (human) : EIF2D (eukaryotic translation initiation factor 2D)  HGNC  Alliance
Mus musculus (house mouse) : Eif2d (eukaryotic translation initiation factor 2D)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Eif2d (eukaryotic translation initiation factor 2D)
Pan paniscus (bonobo/pygmy chimpanzee) : EIF2D (eukaryotic translation initiation factor 2D)
Canis lupus familiaris (dog) : EIF2D (eukaryotic translation initiation factor 2D)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Eif2d (eukaryotic translation initiation factor 2D)
Sus scrofa (pig) : EIF2D (eukaryotic translation initiation factor 2D)
Chlorocebus sabaeus (African green monkey) : EIF2D (eukaryotic translation initiation factor 2D)
Heterocephalus glaber (naked mole-rat) : Eif2d (eukaryotic translation initiation factor 2D)
more info ...
Related Pseudogenes: Eif2d-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: The name of this locus was changed from ligatin to eukaryotic translation initiation factor 2D based on the gene characterization of the human ortholog reported in PMID:20566627. [18 Aug 2011]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01347,935,138 - 47,958,459 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1347,935,163 - 47,954,090 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01353,011,077 - 53,033,762 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41344,099,725 - 44,118,652 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1342,961,793 - 42,980,721 (+)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Eif2d
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561765
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.