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ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleoprotein complex biogenesis
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Accession:GO:0022613 term browser browse the term
Definition:A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a complex containing RNA and proteins. Includes the biosynthesis of the constituent RNA and protein molecules, and those macromolecular modifications that are involved in synthesis or assembly of the ribonucleoprotein complex.
Synonyms:exact_synonym: RNA-protein complex biogenesis;   ribonucleoprotein complex biogenesis and assembly



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90S preribosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl38 ribosomal protein L38 acts_upstream_of_or_within ISO (PMID:21529712) RGD PMID:21529712 NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004
Ensembl chr14:99,701,362...99,705,004
Ensembl chr 3:99,701,362...99,705,004
Ensembl chr 2:99,701,362...99,705,004
Ensembl chr16:99,701,362...99,705,004
JBrowse link
assembly of large subunit precursor of preribosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif6 eukaryotic translation initiation factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
box C/D snoRNP assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nopchap1 NOP protein chaperone 1 involved_in ISO
IBA
(PMID:33367824)
GO_REF:0000033
RGD
GO_Central
PMID:33367824 GO_REF:0000033 NCBI chr 7:20,353,626...20,359,685
Ensembl chr 7:20,353,634...20,359,690
JBrowse link
G Nufip1 nuclear FMR1 interacting protein 1 involved_in ISO
IBA
(PMID:17636026)
GO_REF:0000033
RGD
GO_Central
PMID:17636026 GO_REF:0000033 NCBI chr15:51,429,518...51,460,308
Ensembl chr15:51,429,549...51,460,310
JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,746,996...69,782,656
Ensembl chr10:69,748,789...69,790,475
JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in ISO
IBA
(PMID:17636026)
GO_REF:0000033
RGD
GO_Central
PMID:17636026 GO_REF:0000033 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Pih1d2 PIH1 domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:50,966,885...50,976,901
Ensembl chr 8:50,966,885...50,975,656
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 involved_in ISO (MGI:5882914|PMID:11842104) RGD PMID:11842104 MGI:5882914 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO
IEA
(PMID:17636026)
GO_REF:0000107
RGD
Ensembl
PMID:17636026 GO_REF:0000107 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
JBrowse link
G Znhit3 zinc finger, HIT-type containing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,775,885...69,790,471
Ensembl chr10:69,748,789...69,790,475
Ensembl chr10:69,748,789...69,790,475
JBrowse link
G Znhit6 zinc finger, HIT-type containing 6 involved_in ISO
IBA
(PMID:17636026)
GO_REF:0000033
RGD
GO_Central
PMID:17636026 GO_REF:0000033 NCBI chr 2:234,486,686...234,517,952
Ensembl chr 2:234,486,704...234,517,960
JBrowse link
box H/ACA snoRNP assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293
JBrowse link
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:133,213,357...133,305,586
Ensembl chr 4:133,213,361...133,305,586
JBrowse link
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bop1 BOP1 ribosomal biogenesis factor involved_in ISO (MGI:3843427|PMID:17353269) RGD PMID:17353269 MGI:3843427 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
JBrowse link
G Nol9 nucleolar protein 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:162,546,522...162,566,625
Ensembl chr 5:162,546,541...162,566,191
JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:9742256 RGD:11535027 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
cytosolic ribosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in ISO
IBA
IEA
ISS
(PMID:21536856)
GO_REF:0000033
GO_REF:0000107
(MGI:5487496|PMID:22904065)
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:21536856 PMID:22904065 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5487496 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:22323517) RGD PMID:22323517 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Efl1 elongation factor like GTPase 1 involved_in ISO
IBA
(PMID:21536732)
GO_REF:0000033
RGD
GO_Central
PMID:21536732 GO_REF:0000033 NCBI chr 1:136,638,527...136,763,518
Ensembl chr 1:136,638,527...136,763,518
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO
IEA
(PMID:21536732)
GO_REF:0000104
RGD
UniProt
PMID:21536732 GO_REF:0000104 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Eif6-ps1 eukaryotic translation initiation factor 6, pseudogene 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:81,584,117...81,585,052
Ensembl chr14:81,584,160...81,584,897
JBrowse link
G Nsun4 NOP2/Sun RNA methyltransferase 4 involved_in ISO (MGI:5573024|PMID:24516400) RGD PMID:24516400 MGI:5573024 NCBI chr 5:129,511,224...129,532,498
Ensembl chr 5:129,512,307...129,532,423
Ensembl chr 5:129,512,307...129,532,423
JBrowse link
G Sbds Sbds, ribosome maturation factor involved_in ISO
IEA
ISS
(PMID:21536732)
GO_REF:0000002
GO_REF:0000024
RGD
InterPro
UniProt
PMID:21536732 GO_REF:0000002 GO_REF:0000024 NCBI chr12:26,420,410...26,429,650
Ensembl chr12:26,420,414...26,429,649
JBrowse link
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abt1 activator of basal transcription 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
JBrowse link
G Fcf1 Fcf1 rRNA-processing protein acts_upstream_of_or_within ISO (PMID:25190460) RGD PMID:25190460 NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643
JBrowse link
G Nop9 NOP9 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 acts_upstream_of_or_within ISO (PMID:25190460) RGD PMID:25190460 NCBI chr 1:226,824,561...226,869,046
Ensembl chr 1:226,824,534...226,902,315
JBrowse link
G Tbl3 transducin (beta)-like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372
JBrowse link
G Utp23 UTP23, small subunit processome component acts_upstream_of_or_within ISO (PMID:25190460) RGD PMID:25190460 NCBI chr 7:83,185,187...83,196,652
Ensembl chr 7:83,189,656...83,196,655
JBrowse link
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abt1 activator of basal transcription 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
JBrowse link
G AC135409.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 8:46,606,877...46,607,131 JBrowse link
G Fcf1 Fcf1 rRNA-processing protein acts_upstream_of_or_within ISO (PMID:25190460) RGD PMID:25190460 NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643
JBrowse link
G LOC100359505 40S ribosomal protein S21-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:71,304,098...71,304,447
Ensembl chr  X:71,304,145...71,304,396
JBrowse link
G Nop9 NOP9 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 acts_upstream_of_or_within ISO (PMID:25190460) RGD PMID:25190460 NCBI chr 1:226,824,561...226,869,046
Ensembl chr 1:226,824,534...226,902,315
JBrowse link
G Rpp40 ribonuclease P/MRP subunit p40 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:28,947,752...28,956,788
Ensembl chr17:28,947,734...28,956,788
JBrowse link
G Rps21 ribosomal protein S21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470
JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:9,733,486...9,735,119
Ensembl chr 5:9,733,091...9,735,140
JBrowse link
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bms1 BMS1 ribosome biogenesis factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:151,558,163...151,595,187
Ensembl chr 4:151,558,163...151,595,127
JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:226,824,561...226,869,046
Ensembl chr 1:226,824,534...226,902,315
JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:34365507)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:34365507 GO_REF:0000024 GO_REF:0000107 NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140
JBrowse link
G Tsr1 TSR1, ribosome maturation factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:59,760,420...59,771,868
Ensembl chr10:59,760,409...59,771,864
JBrowse link
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC135409.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 8:46,606,877...46,607,131 JBrowse link
G LOC100359505 40S ribosomal protein S21-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:71,304,098...71,304,447
Ensembl chr  X:71,304,145...71,304,396
JBrowse link
G Rps21 ribosomal protein S21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470
JBrowse link
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abt1 activator of basal transcription 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
JBrowse link
G Nop9 NOP9 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
JBrowse link
G Tbl3 transducin (beta)-like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372
JBrowse link
enzyme-directed rRNA pseudouridine synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:25219674)
UniProt
RGD
PMID:25219674 GO_REF:0000024
G Rpusd1 RNA pseudouridine synthase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:14,751,310...14,755,213
Ensembl chr10:14,751,384...14,755,207
JBrowse link
G Rpusd2 RNA pseudouridine synthase domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:106,017,759...106,023,010
Ensembl chr 3:106,017,864...106,023,251
JBrowse link
G Tsr3 TSR3 ribosome maturation factor involved_in ISO (PMID:27084949) RGD PMID:27084949 NCBI chr10:14,257,161...14,259,562
Ensembl chr10:14,257,171...14,259,561
JBrowse link
exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eri1 exoribonuclease 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
JBrowse link
G Eri2 ERI1 exoribonuclease family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:174,140,831...174,168,757
Ensembl chr 1:174,141,993...174,168,665
JBrowse link
G Eri3 ERI1 exoribonuclease family member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:131,016,146...131,143,347
Ensembl chr 5:131,016,126...131,143,329
JBrowse link
G Exosc10 exosome component 10 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Exosc2 exosome component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575
JBrowse link
G Exosc3 exosome component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
JBrowse link
G Exosc7 exosome component 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270
JBrowse link
G Exosc8 exosome component 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928
JBrowse link
G Exosc9 exosome component 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051
JBrowse link
formation of cytoplasmic translation initiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif3a eukaryotic translation initiation factor 3, subunit A involved_in ISO
IBA
IEA
ISS
(PMID:17581632)
GO_REF:0000033
GO_REF:0000104
(MGI:3843422|PMID:17581632)
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:17581632 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 MGI:3843422 NCBI chr 1:259,902,767...259,932,976
Ensembl chr 1:259,902,680...259,932,976
JBrowse link
G Eif3b eukaryotic translation initiation factor 3, subunit B involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr12:14,196,403...14,220,865
Ensembl chr12:14,196,403...14,220,886
JBrowse link
G Eif3c eukaryotic translation initiation factor 3, subunit C involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:181,134,604...181,152,489
Ensembl chr 1:181,134,604...181,152,493
JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D involved_in ISO
IEA
(MGI:3843422|PMID:17581632)
GO_REF:0000104
RGD
UniProt
PMID:17581632 GO_REF:0000104 MGI:3843422 NCBI chr 7:109,539,795...109,552,184
Ensembl chr 7:109,539,356...109,552,206
JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:74,339,848...74,372,483
Ensembl chr 7:74,339,828...74,373,096
JBrowse link
G Eif3el1 eukaryotic translation initiation factor 3, subunit E like 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:73,774,491...73,775,984
Ensembl chr 1:73,774,487...73,776,003
JBrowse link
G Eif3f eukaryotic translation initiation factor 3, subunit F involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:162,934,220...162,943,204
Ensembl chr 1:162,934,212...162,943,204
JBrowse link
G Eif3g eukaryotic translation initiation factor 3, subunit G involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:19,429,728...19,433,760
Ensembl chr 8:19,429,643...19,433,808
JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:83,091,037...83,174,451
Ensembl chr 7:83,091,039...83,174,451
JBrowse link
G Eif3i eukaryotic translation initiation factor 3, subunit I involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:141,935,135...141,942,589
Ensembl chr 5:141,935,044...141,942,676
JBrowse link
G Eif3j eukaryotic translation initiation factor 3, subunit J involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:108,985,103...109,007,341
Ensembl chr 3:108,985,118...109,007,953
JBrowse link
G Eif3k eukaryotic translation initiation factor 3, subunit K involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:84,260,127...84,270,051
Ensembl chr 1:84,259,673...84,270,302
JBrowse link
G Eif3l eukaryotic translation initiation factor 3, subunit L involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:110,652,565...110,663,614
Ensembl chr 7:110,627,107...110,663,614
JBrowse link
G Eif3m eukaryotic translation initiation factor 3, subunit M involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:91,424,754...91,442,358
Ensembl chr 3:91,416,325...91,442,392
JBrowse link
G Eif5 eukaryotic translation initiation factor 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:130,589,162...130,597,656
Ensembl chr 6:130,589,143...130,597,656
JBrowse link
formation of translation preinitiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Denr density regulated reinitiation and release factor involved_in ISO
IBA
(PMID:20713520)
GO_REF:0000033
RGD
GO_Central
PMID:20713520 GO_REF:0000033 NCBI chr12:32,662,512...32,685,283
Ensembl chr12:32,662,516...32,683,843
JBrowse link
G Dhx29 DExH-box helicase 29 involved_in ISO (PMID:23047696) RGD PMID:23047696 NCBI chr 2:44,560,653...44,611,450
Ensembl chr 2:44,560,714...44,611,445
JBrowse link
G Eif2d eukaryotic translation initiation factor 2D involved_in ISO
IBA
IEA
(PMID:20713520)
GO_REF:0000033
GO_REF:0000002
RGD
GO_Central
InterPro
PMID:20713520 GO_REF:0000002 GO_REF:0000033 NCBI chr13:42,615,901...42,637,107
Ensembl chr13:42,615,911...42,639,719
JBrowse link
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,374,652...143,395,460
Ensembl chr 3:143,373,686...143,395,432
JBrowse link
G Eif2s3 eukaryotic translation initiation factor 2 subunit gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:58,916,513...58,939,923
Ensembl chr  X:58,917,490...58,940,686
JBrowse link
G Eif2s3y eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:869,654...889,341
Ensembl chr  Y:869,689...889,340
JBrowse link
G Eif5 eukaryotic translation initiation factor 5 IDA
IMP
RGD PMID:8464924 PMID:10805737 RGD:728212, RGD:10755758 NCBI chr 6:130,589,162...130,597,656
Ensembl chr 6:130,589,143...130,597,656
JBrowse link
G Mcts1 MCTS1, re-initiation and release factor involved_in ISO
IBA
IEA
(PMID:20713520)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:20713520 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:117,350,723...117,362,504
Ensembl chr  X:117,350,889...117,362,504
JBrowse link
G Rps2 ribosomal protein S2 IMP RGD PMID:344063 RGD:2299070 NCBI chr10:13,747,316...13,749,165
Ensembl chr10:13,747,301...13,749,163
JBrowse link
generation of catalytic spliceosome for first transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC134482366 splicing factor YJU2-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104
G Xab2 XPA binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
JBrowse link
G Yju2 YJU2 splicing factor involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:789,603...799,505
Ensembl chr 9:789,606...799,496
JBrowse link
generation of catalytic spliceosome for second transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
JBrowse link
G Prpf18 pre-mRNA processing factor 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979
JBrowse link
maturation of 5.8S rRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1d C1D nuclear receptor corepressor involved_in ISO
IBA
(PMID:17412707)
GO_REF:0000033
RGD
GO_Central
PMID:17412707 GO_REF:0000033 NCBI chr14:91,660,951...91,673,177
Ensembl chr14:91,660,989...91,672,852
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Eri1 exoribonuclease 1 involved_in ISO (PMID:37352860) RGD PMID:37352860 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:17412707), (PMID:20368444) RGD PMID:17412707 PMID:20368444 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:20368444) RGD PMID:20368444 NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573
JBrowse link
G Las1l LAS1-like, ribosome biogenesis factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:60,851,969...60,873,717
Ensembl chr  X:60,851,962...60,873,687
JBrowse link
G Mak16 MAK16 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:60,972,699...60,981,250
Ensembl chr16:60,972,697...60,983,243
JBrowse link
G Mphosph6 M phase phosphoprotein 6 involved_in ISO
IBA
(PMID:17412707)
GO_REF:0000033
RGD
GO_Central
PMID:17412707 GO_REF:0000033 NCBI chr19:45,860,152...45,870,117
Ensembl chr19:45,860,154...45,870,170
JBrowse link
G Mtrex Mtr4 exosome RNA helicase involved_in ISO
IBA
(PMID:17412707)
GO_REF:0000033
RGD
GO_Central
PMID:17412707 GO_REF:0000033 NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627
JBrowse link
G Nol9 nucleolar protein 9 involved_in ISO (PMID:21063389) RGD PMID:21063389 NCBI chr 5:162,546,522...162,566,625
Ensembl chr 5:162,546,541...162,566,191
JBrowse link
G Nsa2 NSA2 ribosome biogenesis factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:28,443,142...28,449,393
Ensembl chr 2:28,441,269...28,449,388
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:32103174) RGD PMID:32103174 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Rpf1 ribosome production factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:235,403,020...235,417,546
Ensembl chr 2:235,403,021...235,417,807
JBrowse link
G Rrp15 ribosomal RNA processing 15 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:98,276,276...98,299,357
Ensembl chr13:98,276,134...98,299,370
JBrowse link
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bop1 BOP1 ribosomal biogenesis factor involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
JBrowse link
G Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,180,945...91,187,389
Ensembl chr10:91,180,696...91,187,397
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 involved_in ISO
IEA
ISS
(PMID:16738141)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:16738141 GO_REF:0000024 GO_REF:0000104 NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
JBrowse link
G Urb1 URB1 ribosome biogenesis homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:30,004,539...30,065,315
Ensembl chr11:30,004,539...30,065,363
JBrowse link
G Wdr12 WD repeat domain 12 involved_in ISO
IBA
IEA
ISS
(PMID:16043514)
GO_REF:0000033
GO_REF:0000104
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:16043514 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 9:61,475,498...61,502,762
Ensembl chr 9:61,475,517...61,502,469
JBrowse link
maturation of 5S rRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
JBrowse link
maturation of LSU-rRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007121.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:259,826,698...259,827,548 JBrowse link
G AABR07027819.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr17:43,254,214...43,255,377 JBrowse link
G AABR07029262.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr10:18,291,363...18,292,163 JBrowse link
G AABR07030630.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr10:93,364,092...93,364,568 JBrowse link
G AABR07049918.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 5:139,195,914...139,196,714 JBrowse link
G AC128901.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 4:148,270,351...148,271,151 JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G ENSRNOG00000067069 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:71,346,292...71,347,142 JBrowse link
G Las1l LAS1-like, ribosome biogenesis factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:60,851,969...60,873,717
Ensembl chr  X:60,851,962...60,873,687
JBrowse link
G LOC134483817 large ribosomal subunit protein eL8-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134486107 large ribosomal subunit protein eL8-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Mak16 MAK16 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:60,972,699...60,981,250
Ensembl chr16:60,972,697...60,983,243
JBrowse link
G Nop2 NOP2 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459
JBrowse link
G Nsa2 NSA2 ribosome biogenesis factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:28,443,142...28,449,393
Ensembl chr 2:28,441,269...28,449,388
JBrowse link
G Rpf1 ribosome production factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:235,403,020...235,417,546
Ensembl chr 2:235,403,021...235,417,807
JBrowse link
G Rpf2l1 ribosome production factor 2 homolog like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:134,287,529...134,288,901
Ensembl chr 6:134,287,818...134,288,702
JBrowse link
G Rpl7a ribosomal protein L7A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:10,239,026...10,241,703
Ensembl chr 3:10,239,001...10,241,716
JBrowse link
G Rrp15 ribosomal RNA processing 15 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:98,276,276...98,299,357
Ensembl chr13:98,276,134...98,299,370
JBrowse link
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07008724.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 2:70,904,506...70,905,278 JBrowse link
G Bop1 BOP1 ribosomal biogenesis factor involved_in ISO
IBA
IEA
ISS
(PMID:17353269)
GO_REF:0000033
GO_REF:0000104
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:17353269 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
JBrowse link
G ENSRNOG00000064315 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr15:33,274,509...33,275,597 JBrowse link
G ENSRNOG00000067266 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:165,188,105...165,188,942 JBrowse link
G ENSRNOG00000070052 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 8:73,132,657...73,133,891 JBrowse link
G Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,180,945...91,187,389
Ensembl chr10:91,180,696...91,187,397
JBrowse link
G Gtpbp4 GTP binding protein 4 acts_upstream_of_or_within ISO (PMID:25190460) RGD PMID:25190460 NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009
JBrowse link
G LOC103694242 60S ribosomal protein L7 pseudogene involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:32,995,281...32,996,164
Ensembl chr16:32,995,363...32,996,204
Ensembl chr16:32,995,363...32,996,204
JBrowse link
G LOC120093238 60S ribosomal protein L35-like involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 6:40,423,594...40,425,165
Ensembl chr 6:40,423,832...40,424,203
JBrowse link
G Nifk nucleolar protein interacting with the FHA domain of MKI67 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:29,393,303...29,403,387
Ensembl chr13:29,393,286...29,405,896
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:25190460)
GO_REF:0000033
GO_REF:0000104
(PMID:16738141), (PMID:17353269)
UniProt
RGD
GO_Central
PMID:16738141 PMID:17353269 PMID:25190460 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,746,996...69,782,656
Ensembl chr10:69,748,789...69,790,475
JBrowse link
G Rbm34 RNA binding motif protein 34 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:54,936,516...54,956,810
Ensembl chr19:54,936,531...54,956,715
JBrowse link
G Rpf2 ribosome production factor 2 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:43,630,003...43,651,477
Ensembl chr20:43,629,951...43,651,509
JBrowse link
G Rpl35 ribosomal protein L35 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 3:22,753,255...22,756,217
Ensembl chr 3:22,753,253...22,756,243
JBrowse link
G Rpl35-ps8 ribosomal protein L35, pseudogene 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:18,099,852...18,100,291
Ensembl chr  X:18,099,866...18,100,291
JBrowse link
G Rpl35l1 ribosomal protein L35 like 1 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr18:23,159,401...23,159,843
Ensembl chr18:23,159,441...23,159,812
JBrowse link
G Rpl35l2 ribosomal protein L35 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:30,634,173...30,634,690
Ensembl chr 8:30,634,325...30,634,690
JBrowse link
G Rpl7 ribosomal protein L7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:3,217,184...3,220,192 JBrowse link
G Rpl7-ps15 ribosomal protein L7, pseudogene 15 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:165,188,160...165,189,004 JBrowse link
G Rpl7l1 ribosomal protein L7-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,198,101...14,206,119
Ensembl chr 9:14,198,092...14,206,110
JBrowse link
G Urb1 URB1 ribosome biogenesis homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:30,004,539...30,065,315
Ensembl chr11:30,004,539...30,065,363
JBrowse link
G Wdr12 WD repeat domain 12 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000104
(PMID:16043514), (PMID:17353269)
UniProt
GO_Central
RGD
PMID:16043514 PMID:17353269 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 9:61,475,498...61,502,762
Ensembl chr 9:61,475,517...61,502,469
JBrowse link
G Znhit3 zinc finger, HIT-type containing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,775,885...69,790,471
Ensembl chr10:69,748,789...69,790,475
Ensembl chr10:69,748,789...69,790,475
JBrowse link
G Znhit6 zinc finger, HIT-type containing 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:234,486,686...234,517,952
Ensembl chr 2:234,486,704...234,517,960
JBrowse link
maturation of SSU-rRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx52 DExD-box helicase 52 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr10:68,824,594...68,847,400
Ensembl chr10:68,824,645...68,848,266
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484
Ensembl chr19:42,114,032...42,116,484
JBrowse link
G Lsm6l1 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484
JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815
JBrowse link
G Nol11 nucleolar protein 11 involved_in ISO
IBA
(PMID:22916032), (PMID:37246770)
GO_REF:0000033
RGD
GO_Central
PMID:22916032 PMID:37246770 GO_REF:0000033 NCBI chr10:92,119,000...92,141,688
Ensembl chr10:92,121,833...92,141,677
JBrowse link
G Nol7 nucleolar protein 7 involved_in ISO (PMID:37246770) RGD PMID:37246770 NCBI chr17:21,303,650...21,306,924
Ensembl chr17:21,302,624...21,307,431
JBrowse link
G Nop14 NOP14 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,081,313...76,102,454
Ensembl chr14:76,080,793...76,102,453
JBrowse link
G Riok1 RIO kinase 1 involved_in ISO
IBA
(PMID:22072790)
GO_REF:0000033
RGD
GO_Central
PMID:22072790 GO_REF:0000033 NCBI chr17:26,767,440...26,789,900
Ensembl chr17:26,766,947...26,789,900
JBrowse link
G Riok2 RIO kinase 2 involved_in ISO
IBA
(PMID:19564402)
GO_REF:0000033
RGD
GO_Central
PMID:19564402 GO_REF:0000033 NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512
JBrowse link
G Riok3 RIO kinase 3 involved_in ISO
IBA
(PMID:22418843)
GO_REF:0000033
RGD
GO_Central
PMID:22418843 GO_REF:0000033 NCBI chr18:3,327,776...3,353,350
Ensembl chr18:3,327,776...3,353,343
JBrowse link
G Rps14 ribosomal protein S14 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:54,227,854...54,232,638
Ensembl chr18:54,227,854...54,233,166
JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:16990592), (PMID:17053056) RGD PMID:16990592 PMID:17053056 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
JBrowse link
G Rps28 ribosomal protein S28 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170
Ensembl chr16:14,607,801...14,609,170
JBrowse link
G Rps28-ps4 ribosomal protein S28, pseudogene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:12,825,455...12,825,905
Ensembl chr20:12,825,606...12,825,815
JBrowse link
G Rps28-ps5 ribosomal protein S28, pseudogene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:94,937,477...94,937,817
Ensembl chr14:94,937,482...94,937,815
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872
JBrowse link
G Snu13l1 small nuclear ribonucleoprotein 13 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:150,624,087...150,624,525
Ensembl chr  X:150,624,087...150,624,473
JBrowse link
G Srfbp1 serum response factor binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:45,920,389...45,945,385
Ensembl chr18:45,920,446...45,942,515
JBrowse link
G Tsr3 TSR3 ribosome maturation factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:14,257,161...14,259,562
Ensembl chr10:14,257,171...14,259,561
JBrowse link
G Utp4 UTP4 small subunit processome component involved_in ISO (PMID:22916032) RGD PMID:22916032 NCBI chr19:34,790,962...34,820,558
Ensembl chr19:34,792,457...34,820,550
JBrowse link
G Wdr3 WD repeat domain 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:187,505,816...187,528,432
Ensembl chr 2:187,505,816...187,528,432
JBrowse link
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bms1 BMS1 ribosome biogenesis factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:151,558,163...151,595,187
Ensembl chr 4:151,558,163...151,595,127
JBrowse link
G Bysl bystin-like involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17242206)
Ensembl
RGD
PMID:17242206 GO_REF:0000107 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
JBrowse link
G Dcaf13 DDB1 and CUL4 associated factor 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:70,160,983...70,196,142
Ensembl chr 7:70,160,941...70,196,142
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:23562818) RGD PMID:23562818 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO MGI:5514340 (PMID:23562818) RGD PMID:23562818 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
JBrowse link
G Heatr1 HEAT repeat containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:58,053,288...58,093,895
Ensembl chr17:58,051,700...58,093,948
JBrowse link
G LOC102548369 40S ribosomal protein S16-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:92,259,763...92,260,218
Ensembl chr15:92,259,763...92,260,203
JBrowse link
G LOC297756 ribosomal protein S8-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:3,392,846...3,393,523
Ensembl chr 5:3,389,210...3,393,500
JBrowse link
G Ngdn neuroguidin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:28,489,950...28,497,286
Ensembl chr15:28,490,040...28,519,654
JBrowse link
G Nol10 nucleolar protein 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:40,144,217...40,225,353
Ensembl chr 6:40,144,235...40,225,353
JBrowse link
G Pwp2 PWP2, small subunit processome component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:10,499,332...10,512,965
Ensembl chr20:10,499,363...10,513,640
JBrowse link
G Rps16 ribosomal protein S16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
JBrowse link
G Rps16l1 ribosomal protein S16 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:21,494,155...21,494,684
Ensembl chr 3:21,494,203...21,494,676
JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:16990592), (PMID:17053056) RGD PMID:16990592 PMID:17053056 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
JBrowse link
G Rps8 ribosomal protein S8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:130,630,362...130,632,932
Ensembl chr 5:130,629,716...130,633,268
JBrowse link
G Rps8-ps17 ribosomal protein S8, pseudogene 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:98,586,109...98,586,784
Ensembl chr 3:98,586,108...98,586,808
JBrowse link
G Rps8l1 ribosomal protein S8 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:83,759,360...83,760,027
Ensembl chr17:83,759,369...83,760,019
JBrowse link
G Rrp36 ribosomal RNA processing 36 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,308,956...14,316,959
Ensembl chr 9:14,308,982...14,316,110
JBrowse link
G Rsl1d1 ribosomal L1 domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:4,424,868...4,436,753
Ensembl chr10:4,397,821...4,439,593
JBrowse link
G Slx9 SLX9 ribosome biogenesis factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:11,114,632...11,147,532
Ensembl chr20:11,114,589...11,147,521
JBrowse link
G Tsr1 TSR1, ribosome maturation factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:59,760,420...59,771,868
Ensembl chr10:59,760,409...59,771,864
JBrowse link
G Tsr2 TSR2, ribosome maturation factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:20,064,102...20,072,673
Ensembl chr  X:20,064,103...20,072,620
JBrowse link
G Utp25 UTP25 small subunit processome component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:104,630,390...104,651,681
Ensembl chr13:104,630,391...104,651,662
JBrowse link
G Utp3 UTP3, small subunit processome component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:19,515,716...19,517,370
Ensembl chr14:19,515,669...19,517,396
JBrowse link
G Utp4 UTP4 small subunit processome component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:34,790,962...34,820,558
Ensembl chr19:34,792,457...34,820,550
JBrowse link
G Utp6 UTP6 small subunit processome component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:64,897,321...64,927,997
Ensembl chr10:64,897,328...64,927,997
JBrowse link
G Wdr43 WD repeat domain 43 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846
JBrowse link
G Wdr46 WD repeat domain 46 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,937,845...4,945,796
Ensembl chr20:4,937,847...4,946,535
JBrowse link
mitochondrial large ribosomal subunit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx28 DEAD-box helicase 28 involved_in ISO
IBA
(PMID:25683715)
GO_REF:0000033
RGD
GO_Central
PMID:25683715 GO_REF:0000033 NCBI chr19:33,909,799...33,911,729
Ensembl chr19:33,909,801...33,911,742
JBrowse link
G Dhx30 DExH-box helicase 30 involved_in ISO
IEA
ISS
(PMID:25683715)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25683715 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:110,064,751...110,096,954
Ensembl chr 8:110,064,752...110,097,381
JBrowse link
G Fastkd2 FAST kinase domains 2 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:25683715)
Ensembl
UniProt
RGD
PMID:25683715 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:65,166,148...65,188,184
Ensembl chr 9:65,168,228...65,188,174
JBrowse link
G LOC134479940 mitochondrial ribosome and complex I assembly factor AltMIEF1 involved_in ISO
IEA
(PMID:31666358)
GO_REF:0000107
RGD
Ensembl
PMID:31666358 GO_REF:0000107
G Mief1 mitochondrial elongation factor 1 involved_in ISO (PMID:31666358) RGD PMID:31666358 NCBI chr 7:111,786,630...111,802,220
Ensembl chr 7:111,786,709...111,802,220
JBrowse link
G Mrm2 mitochondrial rRNA methyltransferase 2 involved_in ISO (PMID:35177605) RGD PMID:35177605 NCBI chr12:14,309,556...14,314,759
Ensembl chr12:14,251,941...14,314,118
JBrowse link
mitochondrial ribosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpv17l2 MPV17 mitochondrial inner membrane protein like 2 involved_in ISO
IBA
(PMID:24948607)
GO_REF:0000033
RGD
GO_Central
PMID:24948607 GO_REF:0000033 NCBI chr16:18,680,106...18,684,212
Ensembl chr16:18,681,826...18,684,212
JBrowse link
G Mrps2 mitochondrial ribosomal protein S2 involved_in ISO (PMID:29576219) RGD PMID:29576219 NCBI chr 3:11,803,044...11,806,341
Ensembl chr 3:11,801,310...11,806,313
JBrowse link
G Mterf3 mitochondrial transcription termination factor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:63,826,418...63,844,747
Ensembl chr 7:63,826,427...63,844,658
JBrowse link
G Mterf4 mitochondrial transcription termination factor 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:93,834,162...93,838,838
Ensembl chr 9:93,834,144...93,838,864
JBrowse link
G Ngrn neugrin, neurite outgrowth associated involved_in ISO
ISS
(PMID:27667664)
GO_REF:0000024
RGD
UniProt
PMID:27667664 GO_REF:0000024 NCBI chr 1:134,213,235...134,219,348
Ensembl chr 1:134,213,456...134,219,339
JBrowse link
G Noa1 nitric oxide associated 1 involved_in ISO (MGI:5292654|PMID:21118999) RGD PMID:21118999 MGI:5292654 NCBI chr14:30,835,264...30,851,294
Ensembl chr14:30,835,247...30,851,293
JBrowse link
mitochondrial small ribosomal subunit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcat malonyl-CoA-acyl carrier protein transacylase involved_in ISO (PMID:36482135) RGD PMID:36482135 NCBI chr 7:114,693,612...114,705,677
Ensembl chr 7:114,693,612...114,704,542
JBrowse link
G Mettl17 methyltransferase like 17 involved_in ISO (PMID:36482135), (PMID:38199006) RGD PMID:36482135 PMID:38199006 NCBI chr15:24,582,296...24,589,029
Ensembl chr15:24,582,406...24,589,026
JBrowse link
mRNA 3'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
JBrowse link
G Slu7 SLU7 homolog, splicing factor involved_in ISO
ISS
(PMID:15728250)
PMID:15181151
RGD PMID:15728250 PMID:15181151 RGD:1304333 NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
JBrowse link
mRNA 5'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000066758 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:14,995,412...14,996,454 JBrowse link
G LOC120099250 U1 small nuclear ribonucleoprotein C-like involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr  X:135,673,708...135,678,865 JBrowse link
G Prpf39 pre-mRNA processing factor 39 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:83,088,981...83,113,826
Ensembl chr 6:83,088,986...83,113,825
JBrowse link
G Psip1 PC4 and SRSF1 interacting protein 1 involved_in ISO
IEA
ISS
(PMID:9885563)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9885563 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257
JBrowse link
G Sfswap splicing factor SWAP involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:8940107)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:8940107 GO_REF:0000033 GO_REF:0000107 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:8940107), (PMID:9885563) RGD PMID:8940107 PMID:9885563 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
JBrowse link
mRNA splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:11158314)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11158314 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:11158314)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11158314 GO_REF:0000033 GO_REF:0000107 NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333
JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:11158314) RGD PMID:11158314 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322
JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041
JBrowse link
G Khdc4 KH domain containing 4, pre-mRNA splicing factor involved_in ISO (PMID:19641227) RGD PMID:19641227 NCBI chr 2:174,149,059...174,177,816
Ensembl chr 2:174,149,141...174,177,504
JBrowse link
G Luc7l LUC7-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112
JBrowse link
G Luc7l2 LUC7-like 2 pre-mRNA splicing factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:67,287,593...67,347,986
Ensembl chr 4:67,287,640...67,347,964
JBrowse link
G Luc7l3 LUC7-like 3 pre-mRNA splicing factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,240,050...79,276,555
Ensembl chr10:79,240,563...79,276,538
JBrowse link
G Luc7l3-ps2 LUC7-like 3 pre-mRNA splicing factor, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:49,653,487...49,655,419 JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 acts_upstream_of_or_within ISO MGI:3052922 (PMID:14671308), (PMID:16717059) RGD PMID:14671308 PMID:16717059 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:10196175)
UniProt
Ensembl
RGD
PMID:10196175 GO_REF:0000024 GO_REF:0000107 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4124189 (PMID:10829067), (PMID:22802532)
Ensembl
RGD
PMID:10829067 PMID:22802532 GO_REF:0000107 NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531
JBrowse link
G Rbmx RNA binding motif protein, X-linked IMP RGD PMID:19282290 RGD:2316827 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743
JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
JBrowse link
G Setx senataxin involved_in ISO (PMID:19515850) RGD PMID:19515850 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:9774382) RGD PMID:9774382 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:12549914)
UniProt
RGD
PMID:12549914 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20167602)
UniProt
RGD
PMID:20167602 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
negative regulation of formation of translation preinitiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl13a ribosomal protein L13A involved_in ISO
ISS
(PMID:17218275)
GO_REF:0000024
RGD
UniProt
PMID:17218275 GO_REF:0000024 NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
JBrowse link
negative regulation of ribosomal large subunit export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm10 RNA binding motif protein 10 involved_in ISO (PMID:35393574) RGD PMID:35393574 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
negative regulation of ribosome biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (MGI:4820652|PMID:20513429) RGD PMID:20513429 MGI:4820652 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Malsu1 mitochondrial assembly of ribosomal large subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:78,051,090...78,059,913
Ensembl chr 4:78,051,059...78,059,905
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) RGD PMID:18082964 MGI:3772418 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
negative regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:26867678) RGD PMID:26867678 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064
JBrowse link
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor acts_upstream_of_or_within ISO (PMID:20663920) RGD PMID:20663920 NCBI chr 4:133,213,357...133,305,586
Ensembl chr 4:133,213,361...133,305,586
JBrowse link
positive regulation of ribosomal small subunit export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Riok2 RIO kinase 2 involved_in ISO (PMID:19564402) RGD PMID:19564402 NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512
JBrowse link
positive regulation of ribosome biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp16 ubiquitin specific peptidase 16 involved_in ISO
ISS
(PMID:32129764)
GO_REF:0000024
RGD
UniProt
PMID:32129764 GO_REF:0000024 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539
JBrowse link
positive regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor involved_in ISO (PMID:25851604) RGD PMID:25851604 NCBI chr12:21,629,551...21,640,758
Ensembl chr12:21,629,536...21,640,751
JBrowse link
G Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor involved_in ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 2:38,343,086...38,368,242
Ensembl chr 2:38,354,854...38,368,227
JBrowse link
G Heatr1 HEAT repeat containing 1 involved_in ISO (PMID:17699751) RGD PMID:17699751 NCBI chr17:58,053,288...58,093,895
Ensembl chr17:58,051,700...58,093,948
JBrowse link
G Riok1 RIO kinase 1 involved_in ISO (PMID:22072790) RGD PMID:22072790 NCBI chr17:26,767,440...26,789,900
Ensembl chr17:26,766,947...26,789,900
JBrowse link
G Riok2 RIO kinase 2 involved_in ISO (PMID:19564402) RGD PMID:19564402 NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512
JBrowse link
G Sirt7 sirtuin 7 involved_in ISO
ISS
(PMID:26867678)
GO_REF:0000024
RGD
UniProt
PMID:26867678 GO_REF:0000024 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172
JBrowse link
G Trmt112 tRNA methyltransferase activator subunit 11-2 involved_in ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 1:204,103,298...204,104,151 JBrowse link
G Utp15 UTP15, small subunit processome component involved_in ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 2:29,594,405...29,612,819
Ensembl chr 2:29,594,941...29,612,773
JBrowse link
G Wdr43 WD repeat domain 43 involved_in ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846
JBrowse link
G Wdr75 WD repeat domain 75 involved_in ISO
IBA
(PMID:17699751)
GO_REF:0000033
RGD
GO_Central
PMID:17699751 GO_REF:0000033 NCBI chr 9:47,903,214...47,933,399
Ensembl chr 9:47,903,200...47,933,399
JBrowse link
positive regulation of telomerase catalytic core complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26586433) RGD PMID:26586433 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:26586433) RGD PMID:26586433 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
JBrowse link
protein-RNA complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO MGI:2177650|MGI:5570192 (PMID:23936366) RGD PMID:23936366 NCBI chr 3:77,491,195...77,593,300
Ensembl chr 3:77,491,276...77,593,264
JBrowse link
G Rpl38 ribosomal protein L38 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004
Ensembl chr14:99,701,362...99,705,004
Ensembl chr 3:99,701,362...99,705,004
Ensembl chr 2:99,701,362...99,705,004
Ensembl chr16:99,701,362...99,705,004
JBrowse link
G Rpl38-ps8 ribosomal protein L38, pseudogene 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:184,905,148...184,905,477
Ensembl chr 2:184,905,204...184,905,416
Ensembl chr16:184,905,204...184,905,416
Ensembl chr 3:184,905,204...184,905,416
Ensembl chr14:184,905,204...184,905,416
JBrowse link
G Rpl38l1 ribosomal protein L38 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:60,296,358...60,296,687
Ensembl chr 4:60,296,410...60,296,622
JBrowse link
G Rpl38l3 ribosomal protein L38 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:68,969,607...68,969,819
Ensembl chr  X:68,969,607...68,969,819
JBrowse link
G Rpl38l4 ribosomal protein L38 like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:67,435,131...67,435,363
Ensembl chr18:67,435,134...67,435,346
JBrowse link
G Rpl38l6 ribosomal protein L38 like 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,285,738...143,286,894
Ensembl chr 3:143,286,247...143,286,435
JBrowse link
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor involved_in ISO (PMID:19383767) RGD PMID:19383767 NCBI chr 4:133,213,357...133,305,586
Ensembl chr 4:133,213,361...133,305,586
JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISO (PMID:33230114) RGD PMID:33230114 NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
JBrowse link
regulation of ribosome biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl18 methyltransferase 18, RPL3 N3(tau)-histidine involved_in ISS
ISO
GO_REF:0000024
(PMID:33693809)
UniProt
RGD
PMID:33693809 GO_REF:0000024 NCBI chr13:76,345,888...76,348,798
Ensembl chr13:76,345,957...76,348,836
JBrowse link
regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl18 methyltransferase 18, RPL3 N3(tau)-histidine involved_in ISS
ISO
GO_REF:0000024
(PMID:33693809)
UniProt
RGD
PMID:33693809 GO_REF:0000024 NCBI chr13:76,345,888...76,348,798
Ensembl chr13:76,345,957...76,348,836
JBrowse link
G Ncl nucleolin IDA RGD PMID:2049089 RGD:9588272 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:19208757)
(MGI:6117526|PMID:29273634)
RGD PMID:19208757 PMID:29273634 MGI:6117526 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:31815440) RGD PMID:31815440 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
ribosomal large subunit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC123138.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 4:46,146,917...46,147,919 JBrowse link
G Bop1 BOP1 ribosomal biogenesis factor involved_in ISO (PMID:24120868) RGD PMID:24120868 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
JBrowse link
G Brix1 biogenesis of ribosomes BRX1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:59,450,608...59,461,486
Ensembl chr 2:59,450,614...59,461,495
JBrowse link
G Mdn1 midasin AAA ATPase 1 involved_in ISO
IBA
(PMID:27814492)
GO_REF:0000033
RGD
GO_Central
PMID:27814492 GO_REF:0000033 NCBI chr 5:47,055,435...47,190,426
Ensembl chr 5:47,055,447...47,186,332
JBrowse link
G Mrto4 MRT4 homolog, ribosome maturation factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:151,601,780...151,608,533
Ensembl chr 5:151,601,780...151,608,287
JBrowse link
G Nle1 notchless homolog 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:67,834,059...67,844,771
Ensembl chr10:67,834,062...67,842,658
JBrowse link
G Nop2 NOP2 nucleolar protein involved_in ISO (PMID:24120868) RGD PMID:24120868 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO
IBA
(PMID:24120868)
GO_REF:0000033
RGD
GO_Central
PMID:24120868 GO_REF:0000033 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902
JBrowse link
G Ppan peter pan homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,423,908...19,427,941
Ensembl chr 8:19,423,961...19,427,938
JBrowse link
G Rpf2 ribosome production factor 2 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:43,630,003...43,651,477
Ensembl chr20:43,629,951...43,651,509
JBrowse link
G Rpf2l1 ribosome production factor 2 homolog like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:134,287,529...134,288,901
Ensembl chr 6:134,287,818...134,288,702
JBrowse link
G Rpl10 ribosomal protein L10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:152,054,562...152,056,769
Ensembl chr  X:152,054,452...152,056,761
JBrowse link
G Rpl10l ribosomal protein L10 like involved_in ISO
IBA
(MGI:6835429|PMID:28502657)
GO_REF:0000033
RGD
GO_Central
PMID:28502657 GO_REF:0000033 MGI:6835429 NCBI chr 6:84,544,771...84,545,791
Ensembl chr 6:84,543,540...84,545,816
JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:24120868) RGD PMID:24120868 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rpl23a ribosomal protein L23A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:63,076,660...63,079,346
Ensembl chr10:63,076,066...63,079,346
JBrowse link
G Rpl23al1 ribosomal protein L23A like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:38,452,814...38,453,384
Ensembl chr 2:38,451,401...38,453,417
JBrowse link
G Rpl23al4 ribosomal protein L23A like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:31,302,164...31,302,986
Ensembl chr15:31,302,329...31,302,979
JBrowse link
G Rpl23al6 ribosomal protein L23A like 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:149,492,385...149,492,849
Ensembl chr 4:149,492,385...149,492,849
JBrowse link
G Rpl23al9 ribosomal protein L23A like 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:63,894,996...63,895,471
Ensembl chr13:63,894,996...63,895,466
JBrowse link
G Rpl24 ribosomal protein L24 acts_upstream_of_or_within ISO MGI:1856685 (PMID:15289434) RGD PMID:15289434 NCBI chr11:44,653,937...44,659,346
Ensembl chr11:44,653,937...44,659,370
JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO
IBA
(PMID:24120868)
GO_REF:0000033
RGD
GO_Central
PMID:24120868 GO_REF:0000033 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Rpl6 ribosomal protein L6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,347,493...35,352,011
Ensembl chr12:35,347,497...35,351,921
JBrowse link
G Rpl6-ps6 ribosomal protein L6, pseudogene 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:15,111,153...15,112,082
Ensembl chr17:15,111,186...15,112,040
JBrowse link
G Rplp0 ribosomal protein lateral stalk subunit P0 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,054,363...41,057,632
Ensembl chr12:41,054,179...41,057,632
JBrowse link
G Rplp0l1 ribosomal protein lateral stalk subunit P0 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:191,921,503...191,922,661
Ensembl chr 2:191,921,574...191,922,646
JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog involved_in ISS
ISO
GO_REF:0000024
(PMID:24120868)
UniProt
RGD
PMID:24120868 GO_REF:0000024 NCBI chr 5:9,733,486...9,735,119
Ensembl chr 5:9,733,091...9,735,140
JBrowse link
G Traf7 TNF receptor associated factor 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,533,570...13,552,290
Ensembl chr10:13,533,570...13,552,203
JBrowse link
ribosomal large subunit biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007744.2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:27,601,232...27,601,825 JBrowse link
G AABR07025089.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr16:26,091,905...26,186,434 JBrowse link
G AABR07055527.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:4,352,572...4,353,409 JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO (PMID:35354024) RGD PMID:35354024 NCBI chr 2:120,306,417...120,497,707
Ensembl chr 2:120,306,412...120,497,705
JBrowse link
G Afg2b AFG2 AAA ATPase homolog B involved_in ISO
ISS
(PMID:35354024)
GO_REF:0000024
RGD
UniProt
PMID:35354024 GO_REF:0000024 NCBI chr 3:109,694,739...109,708,356
Ensembl chr 3:109,694,757...109,707,757
JBrowse link
G Airim AFG2 interacting ribosome maturation factor involved_in ISO (PMID:35354024) RGD PMID:35354024 NCBI chr 5:137,198,688...137,205,912
Ensembl chr 5:137,198,720...137,204,026
JBrowse link
G Bop1 BOP1 ribosomal biogenesis factor acts_upstream_of_or_within ISO (PMID:10891491) RGD PMID:10891491 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
JBrowse link
G Cinp cyclin-dependent kinase 2-interacting protein involved_in ISO (PMID:35354024) RGD PMID:35354024 NCBI chr 6:129,878,618...129,899,575
Ensembl chr 6:129,885,570...129,899,480
JBrowse link
G Ebna1bp2 EBNA1 binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:132,148,164...132,152,730
Ensembl chr 5:132,148,143...132,153,267
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Eif6-ps1 eukaryotic translation initiation factor 6, pseudogene 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:81,584,117...81,585,052
Ensembl chr14:81,584,160...81,584,897
JBrowse link
G ENSRNOG00000065109 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr 9:35,478,540...35,480,126 JBrowse link
G Gtf3a general transcription factor III A involved_in ISO
ISS
IEA
(PMID:24120868)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:24120868 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,136,746...8,144,690
Ensembl chr12:8,136,747...8,144,690
JBrowse link
G Gtpbp4 GTP binding protein 4 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:32669547)
UniProt
GO_Central
RGD
PMID:32669547 GO_REF:0000024 GO_REF:0000033 NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009
JBrowse link
G Heatr3 HEAT repeat containing 3 involved_in ISO
IBA
(PMID:35213692)
GO_REF:0000033
RGD
GO_Central
PMID:35213692 GO_REF:0000033 NCBI chr19:18,892,477...18,930,502
Ensembl chr19:18,893,144...18,930,509
JBrowse link
G Lto1 LTO1 maturation factor of ABCE1 involved_in ISO (PMID:23318452) RGD PMID:23318452 NCBI chr 1:200,074,247...200,080,951
Ensembl chr 1:200,074,253...200,088,061
JBrowse link
G Malsu1 mitochondrial assembly of ribosomal large subunit 1 involved_in ISO (PMID:22238376) RGD PMID:22238376 NCBI chr 4:78,051,090...78,059,913
Ensembl chr 4:78,051,059...78,059,905
JBrowse link
G Mrto4 MRT4 homolog, ribosome maturation factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:151,601,780...151,608,533
Ensembl chr 5:151,601,780...151,608,287
JBrowse link
G Nip7 nucleolar pre-rRNA processing protein NIP7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:34,962,557...34,964,700
Ensembl chr19:34,962,557...34,964,711
JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO MGI:3624778 (PMID:24062412) RGD PMID:24062412 NCBI chr10:67,834,059...67,844,771
Ensembl chr10:67,834,062...67,842,658
JBrowse link
G Noc2l NOC2-like nucleolar associated transcriptional repressor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:166,820,150...166,831,949
Ensembl chr 5:166,820,161...166,831,949
JBrowse link
G Nop16 NOP16 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:10,022,950...10,027,867
Ensembl chr17:10,022,932...10,027,867
JBrowse link
G Nop2 NOP2 nucleolar protein involved_in ISO (PMID:36161484) RGD PMID:36161484 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459
JBrowse link
G Npm1 nucleophosmin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18809582)
GO_Central
RGD
PMID:18809582 GO_REF:0000033 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nvl nuclear VCP-like involved_in ISO (PMID:26166824), (PMID:26456651) RGD PMID:26166824 PMID:26456651 NCBI chr13:92,851,023...92,906,749
Ensembl chr13:92,853,650...92,906,049
JBrowse link
G Pak1ip1 PAK1 interacting protein 1 involved_in ISO (PMID:24120868) RGD PMID:24120868 NCBI chr17:23,742,217...23,753,325
Ensembl chr17:23,741,414...23,753,324
JBrowse link
G Retreg1 reticulophagy regulator 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
JBrowse link
G Rpf2 ribosome production factor 2 homolog involved_in ISO (PMID:24120868) RGD PMID:24120868 NCBI chr20:43,630,003...43,651,477
Ensembl chr20:43,629,951...43,651,509
JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rpl14 ribosomal protein L14 involved_in ISO
IBA
(PMID:18697920)
GO_REF:0000033
RGD
GO_Central
PMID:18697920 GO_REF:0000033 NCBI chr 8:120,286,035...120,289,160
Ensembl chr 8:120,284,645...120,289,064
JBrowse link
G Rpl14l1 ribosomal protein L14 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:55,520,332...55,531,879
Ensembl chr15:55,520,332...55,531,842
JBrowse link
G Rpl14l2 ribosomal protein L14 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:42,594,039...42,594,681
Ensembl chr14:42,594,039...42,594,665
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO
IBA
(PMID:18697920)
GO_REF:0000033
RGD
GO_Central
PMID:18697920 GO_REF:0000033 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
JBrowse link
G Rpl26-ps1 ribosomal protein L26, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:112,264,114...112,264,619
Ensembl chr 7:112,264,153...112,264,590
JBrowse link
G Rpl26-ps2 ribosomal protein L26, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:28,917,937...28,918,420
Ensembl chr 1:28,917,918...28,918,443
Ensembl chr 1:28,917,918...28,918,443
JBrowse link
G Rpl35a ribosomal protein L35A involved_in ISO
IBA
(PMID:18697920)
GO_REF:0000033
RGD
GO_Central
PMID:18697920 GO_REF:0000033 NCBI chr11:67,726,031...67,729,953
Ensembl chr11:67,726,032...67,729,942
Ensembl chr 5:67,726,032...67,729,942
JBrowse link
G Rpl35al1 ribosomal protein L35A like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:6,072,279...6,072,780
Ensembl chr12:6,072,271...6,074,618
Ensembl chr 5:6,072,271...6,074,618
JBrowse link
G Rpl35al3 ribosomal protein L35A like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:66,210,063...66,210,640
Ensembl chr10:66,210,276...66,210,608
JBrowse link
G Rpl35al5 ribosomal protein L35A like 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:10,477,818...10,478,314
Ensembl chr17:10,477,880...10,478,212
JBrowse link
G Rpl35al6 ribosomal protein L35A like 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:92,369,741...92,370,081
Ensembl chr 3:92,369,742...92,370,074
JBrowse link
G Rpl35al8 ribosomal protein L35A like 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:91,644,302...91,644,739
Ensembl chr 6:91,644,365...91,644,697
JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Rpl7 ribosomal protein L7 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 5:3,217,184...3,220,192 JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog involved_in ISO
IBA
(PMID:24120868)
GO_REF:0000033
RGD
GO_Central
PMID:24120868 GO_REF:0000033 NCBI chr 5:9,733,486...9,735,119
Ensembl chr 5:9,733,091...9,735,140
JBrowse link
G Rsl24d1 ribosomal L24 domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:73,852,991...73,861,996
Ensembl chr 8:73,852,996...73,862,001
JBrowse link
G Sdad1 SDA1 domain containing 1 involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr14:15,741,489...15,768,271
Ensembl chr14:15,741,434...15,771,066
JBrowse link
G Surf6 surfeit 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:10,221,450...10,232,306
Ensembl chr 3:10,221,452...10,232,251
JBrowse link
G Tma16 translation machinery associated 16 homolog involved_in ISO (PMID:32669547) RGD PMID:32669547 NCBI chr16:23,236,686...23,252,706
Ensembl chr16:23,236,710...23,252,701
JBrowse link
G Wdr74 WD repeat domain 74 involved_in ISO
IBA
(PMID:26456651)
GO_REF:0000033
RGD
GO_Central
PMID:26456651 GO_REF:0000033 NCBI chr 1:205,631,769...205,636,558
Ensembl chr 1:205,631,824...205,636,563
JBrowse link
G Zfp622 zinc finger protein 622 involved_in ISO
IEA
IBA
ISS
(PMID:33711283)
GO_REF:0000117
GO_REF:0000033
GO_REF:0000024
RGD
UniProt
GO_Central
PMID:33711283 GO_REF:0000024 GO_REF:0000033 GO_REF:0000117 NCBI chr 2:76,479,605...76,494,405
Ensembl chr 2:76,335,609...76,493,898
JBrowse link
G Zfp622l1 zinc finger protein 622 like 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 9:35,478,603...35,480,175 JBrowse link
ribosomal large subunit export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007744.2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:27,601,232...27,601,825 JBrowse link
G AABR07025089.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr16:26,091,905...26,186,434 JBrowse link
G AABR07055527.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:4,352,572...4,353,409 JBrowse link
G Mdn1 midasin AAA ATPase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:47,055,435...47,190,426
Ensembl chr 5:47,055,447...47,186,332
JBrowse link
G Nmd3 NMD3 ribosome export adaptor involved_in ISO
IBA
(PMID:12773398)
GO_REF:0000033
RGD
GO_Central
PMID:12773398 GO_REF:0000033 NCBI chr 2:154,012,973...154,038,466
Ensembl chr 2:154,013,020...154,039,259
JBrowse link
G Npm1 nucleophosmin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18809582)
GO_Central
RGD
PMID:18809582 GO_REF:0000033 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nup88 nucleoporin 88 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257
JBrowse link
G Ran RAN, member RAS oncogene family involved_in ISO (PMID:12773398) RGD PMID:12773398 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
JBrowse link
G Sdad1 SDA1 domain containing 1 involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr14:15,741,489...15,768,271
Ensembl chr14:15,741,434...15,771,066
JBrowse link
G Xpo1 exportin 1 involved_in ISO
IBA
IEA
(PMID:12773398)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:12773398 GO_REF:0000033 GO_REF:0000107 NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498
JBrowse link
ribosomal small subunit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005506.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:168,338,500...168,339,520 JBrowse link
G AABR07040944.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:107,697,440...107,698,439 JBrowse link
G Eral1 Era-like 12S mitochondrial rRNA chaperone 1 involved_in ISO
IBA
IEA
ISS
(PMID:20604745), (PMID:28449065)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:20604745 PMID:28449065 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:62,961,725...62,968,747
Ensembl chr10:62,961,730...62,968,994
JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:34318747) RGD PMID:34318747 NCBI chr 1:203,350,226...203,351,741
Ensembl chr 1:203,350,189...203,351,742
JBrowse link
G LOC100911728 40S ribosomal protein S27-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:83,082,817...83,083,112
Ensembl chr13:83,082,817...83,083,056
JBrowse link
G LOC108348601 40S ribosomal protein S19 pseudogene involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:84,754,704...84,755,185
Ensembl chr17:84,754,643...84,755,185
JBrowse link
G LOC108353425 40S ribosomal protein S27-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,089,694...68,089,966 JBrowse link
G LOC120095010 40S ribosomal protein S19-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:2,641,423...2,645,350
Ensembl chr10:2,642,638...2,643,075
JBrowse link
G LOC120101650 40S ribosomal protein S14-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:112,838,842...112,839,309
Ensembl chr 3:112,838,854...112,839,309
JBrowse link
G Mrps7 mitochondrial ribosomal protein S7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:100,843,691...100,846,838
Ensembl chr10:100,843,356...100,847,129
JBrowse link
G Pwp2 PWP2, small subunit processome component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:10,499,332...10,512,965
Ensembl chr20:10,499,363...10,513,640
JBrowse link
G Rps10 ribosomal protein S10 IMP RGD PMID:3378620 RGD:2299075 NCBI chr20:5,694,313...5,698,922
Ensembl chr20:5,694,313...5,699,044
Ensembl chr 6:5,694,313...5,699,044
JBrowse link
G Rps14 ribosomal protein S14 involved_in IMP
IBA
ISS
GO_REF:0000033
GO_REF:0000024
GO_Central
UniProt
RGD
PMID:3378620 GO_REF:0000024 GO_REF:0000033, RGD:2299075 NCBI chr18:54,227,854...54,232,638
Ensembl chr18:54,227,854...54,233,166
JBrowse link
G Rps15 ribosomal protein S15 involved_in IMP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:3378620 GO_REF:0000033, RGD:2299075 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450
JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO
IBA
(PMID:17053056)
GO_REF:0000033
RGD
GO_Central
PMID:17053056 GO_REF:0000033 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
JBrowse link
G Rps19l3 ribosomal protein S19-like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:76,610,075...76,610,605
Ensembl chr 1:76,610,099...76,610,606
JBrowse link
G Rps19l4 ribosomal protein S19 like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:51,365,005...51,365,544 JBrowse link
G Rps2 ribosomal protein S2 IMP RGD PMID:3378620 RGD:2299075 NCBI chr10:13,747,316...13,749,165
Ensembl chr10:13,747,301...13,749,163
JBrowse link
G Rps25 ribosomal protein s25 IMP RGD PMID:3378620 RGD:2299075 NCBI chr 8:44,733,623...44,735,999
Ensembl chr 8:44,733,029...44,737,271
JBrowse link
G Rps27 ribosomal protein S27 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:175,665,858...175,666,963
Ensembl chr 2:175,665,853...175,666,964
JBrowse link
G Rps27-ps7 ribosomal protein S27, pseudogene 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:186,877,655...186,877,923 JBrowse link
G Rps27l ribosomal protein S27-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418
JBrowse link
G Rps27l3 ribosomal protein S27 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:1,154,781...1,157,065
Ensembl chr 9:1,154,987...1,155,443
JBrowse link
G Rps28 ribosomal protein S28 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170
Ensembl chr16:14,607,801...14,609,170
JBrowse link
G Rps28-ps4 ribosomal protein S28, pseudogene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:12,825,455...12,825,905
Ensembl chr20:12,825,606...12,825,815
JBrowse link
G Rps28-ps5 ribosomal protein S28, pseudogene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:94,937,477...94,937,817
Ensembl chr14:94,937,482...94,937,815
JBrowse link
G Rps5 ribosomal protein S5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:73,538,776...73,543,073
Ensembl chr 1:73,538,776...73,543,073
JBrowse link
G Rps6 ribosomal protein S6 IMP RGD PMID:3378620 RGD:2299075 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602
JBrowse link
G Rpsa ribosomal protein SA involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247
JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:114,262,929...114,272,817
Ensembl chr 7:114,256,472...114,272,817
JBrowse link
ribosomal small subunit biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007744.2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:27,601,232...27,601,825 JBrowse link
G AABR07025089.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr16:26,091,905...26,186,434 JBrowse link
G AABR07055527.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:4,352,572...4,353,409 JBrowse link
G Aatf apoptosis antagonizing transcription factor involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr10:69,299,029...69,392,207
Ensembl chr10:69,299,037...69,392,201
JBrowse link
G Ak6 adenylate kinase 6 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:31,794,316...31,806,375
Ensembl chr 2:31,794,519...31,806,371
Ensembl chr20:31,794,519...31,806,371
JBrowse link
G Bms1 BMS1 ribosome biogenesis factor involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 4:151,558,163...151,595,187
Ensembl chr 4:151,558,163...151,595,127
JBrowse link
G C19h1orf131 similar to human chromosome 1 open reading frame 131 involved_in ISO
IEA
ISS
(PMID:34516797)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:34516797 GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,807,932...52,822,259
Ensembl chr19:52,807,934...52,822,267
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802
JBrowse link
G Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 2:38,343,086...38,368,242
Ensembl chr 2:38,354,854...38,368,227
JBrowse link
G Dnttip2 deoxynucleotidyltransferase, terminal, interacting protein 2 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 2:210,374,321...210,386,366
Ensembl chr 2:210,374,289...210,385,581
JBrowse link
G Emg1 EMG1 N1-specific pseudouridine methyltransferase involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:23562818) RGD PMID:23562818 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Exosc10 exosome component 10 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Fbl fibrillarin involved_in ISO
IEA
ISS
(PMID:34516797)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:34516797 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932
JBrowse link
G Fcf1 Fcf1 rRNA-processing protein involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643
JBrowse link
G Heatr1 HEAT repeat containing 1 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr17:58,053,288...58,093,895
Ensembl chr17:58,051,700...58,093,948
JBrowse link
G Imp3 IMP U3 small nucleolar ribonucleoprotein 3 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 8:57,339,528...57,340,416
Ensembl chr 8:57,339,496...57,340,414
JBrowse link
G Imp4 IMP U3 small nucleolar ribonucleoprotein 4 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 9:36,654,127...36,659,265
Ensembl chr 9:36,654,401...36,660,075
JBrowse link
G Krr1 KRR1, small subunit processome component homolog involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 7:47,475,557...47,486,996
Ensembl chr 7:47,475,557...47,486,985
JBrowse link
G LOC120097492 uncharacterized LOC120097492 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:58,159,832...58,164,364 JBrowse link
G LOC120100003 40S ribosomal protein S12-like involved_in IBA
ISS
GO_REF:0000033
GO_REF:0000024
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 NCBI chr 1:220,574,554...220,577,707
Ensembl chr 1:220,577,097...220,577,495
JBrowse link
G Ltv1 LTV1 ribosome biogenesis factor involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 1:7,565,673...7,578,398
Ensembl chr 1:7,565,669...7,578,563
JBrowse link
G Mettl17 methyltransferase like 17 involved_in ISO (MGI:6436379|PMID:31487196) RGD PMID:31487196 MGI:6436379 NCBI chr15:24,582,296...24,589,029
Ensembl chr15:24,582,406...24,589,026
JBrowse link
G Mphosph10 M-phase phosphoprotein 10 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 1:117,948,134...117,964,149
Ensembl chr 1:117,948,134...117,964,149
JBrowse link
G Nat10 N-acetyltransferase 10 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 3:90,111,643...90,149,891
Ensembl chr 3:90,111,645...90,149,927
JBrowse link
G Ngdn neuroguidin involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr15:28,489,950...28,497,286
Ensembl chr15:28,490,040...28,519,654
JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815
JBrowse link
G Nol6 nucleolar protein 6 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 5:56,259,919...56,270,540
Ensembl chr 5:56,260,830...56,270,336
JBrowse link
G Nol7 nucleolar protein 7 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr17:21,303,650...21,306,924
Ensembl chr17:21,302,624...21,307,431
JBrowse link
G Nom1 nucleolar protein with MIF4G domain 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:5,891,220...5,910,741
Ensembl chr 4:5,892,909...5,909,709
JBrowse link
G Nop56 NOP56 ribonucleoprotein involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 3:117,476,963...117,481,847
Ensembl chr 3:117,477,053...117,481,841
JBrowse link
G Nop58 NOP58 ribonucleoprotein involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 9:61,120,939...61,144,810
Ensembl chr 9:61,120,929...61,144,810
JBrowse link
G Npm1 nucleophosmin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18809582)
GO_Central
RGD
PMID:18809582 GO_REF:0000033 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Pno1 partner of NOB1 homolog involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr14:91,609,711...91,618,280
Ensembl chr14:91,609,233...91,618,324
JBrowse link
G Pwp2 PWP2, small subunit processome component involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr20:10,499,332...10,512,965
Ensembl chr20:10,499,363...10,513,640
JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 1:226,824,561...226,869,046
Ensembl chr 1:226,824,534...226,902,315
JBrowse link
G Riok1 RIO kinase 1 involved_in ISO (PMID:22072790) RGD PMID:22072790 NCBI chr17:26,767,440...26,789,900
Ensembl chr17:26,766,947...26,789,900
JBrowse link
G Riok2 RIO kinase 2 involved_in ISO (PMID:19564402) RGD PMID:19564402 NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512
JBrowse link
G Rps11 ribosomal protein S11 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 1:95,605,690...95,607,798
Ensembl chr 1:95,605,692...95,607,874
JBrowse link
G Rps12 ribosomal protein S12 involved_in ISO
IBA
ISS
(PMID:34516797)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:34516797 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:21,680,854...21,683,010
Ensembl chr 1:21,680,852...21,683,014
JBrowse link
G Rps12l1 ribosomal protein S12 like 1 involved_in IBA
ISS
GO_REF:0000033
GO_REF:0000024
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 NCBI chr19:34,343,930...34,344,569
Ensembl chr19:34,343,929...34,344,569
JBrowse link
G Rps12l10 ribosomal protein S12 like 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:95,017,963...95,020,005
Ensembl chr14:95,018,011...95,018,409
JBrowse link
G Rps12l12 ribosomal protein S12-like 12 involved_in ISS
IBA
GO_REF:0000024
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 3:117,490,998...117,491,509
Ensembl chr 3:117,491,079...117,491,477
JBrowse link
G Rps12l2 ribosomal protein S12-like 2 involved_in ISS
IBA
GO_REF:0000024
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 1:252,597,641...252,598,162
Ensembl chr 1:252,597,664...252,598,155
JBrowse link
G Rps12l4 ribosomal protein S12-like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:23,118,845...23,119,632
Ensembl chr 7:23,118,845...23,119,632
JBrowse link
G Rps12l5 ribosomal protein S12 like 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:43,612,528...43,612,958
Ensembl chr 5:43,612,545...43,612,943
JBrowse link
G Rps12l7 ribosomal protein S12-like 7 involved_in ISS
IBA
GO_REF:0000024
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 5:56,967,192...56,987,008
Ensembl chr 5:56,967,236...56,967,634
JBrowse link
G Rps12l9 ribosomal protein S12 like 9 involved_in ISS
IBA
GO_REF:0000024
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 1:76,616,556...76,617,067
Ensembl chr 1:76,616,570...76,617,079
JBrowse link
G Rps13 ribosomal protein S13 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355
Ensembl chr 3:170,572,921...170,575,355
JBrowse link
G Rps14 ribosomal protein S14 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr18:54,227,854...54,232,638
Ensembl chr18:54,227,854...54,233,166
JBrowse link
G Rps15 ribosomal protein S15 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450
JBrowse link
G Rps15a ribosomal protein S15a involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 1:172,420,151...172,427,021
Ensembl chr 1:172,419,761...172,426,995
JBrowse link
G Rps16 ribosomal protein S16 involved_in ISO
ISS
(PMID:18697920), (PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:18697920 PMID:34516797 GO_REF:0000024 NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
JBrowse link
G Rps17 ribosomal protein S17 involved_in ISO
ISS
(PMID:18697920), (PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:18697920 PMID:34516797 GO_REF:0000024 NCBI chr 1:135,295,920...135,298,506
Ensembl chr 1:135,295,919...135,298,535
Ensembl chr 8:135,295,919...135,298,535
JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO
ISS
(PMID:18697920), (PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:18697920 PMID:34516797 GO_REF:0000024 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
JBrowse link
G Rps19bp1 ribosomal protein S19 binding protein 1 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 7:111,809,354...111,812,741
Ensembl chr 7:111,809,355...111,812,757
JBrowse link
G Rps23 ribosomal protein S23 involved_in ISO
IEA
ISS
(PMID:34516797)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:34516797 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:22,079,339...22,080,909
Ensembl chr 2:22,079,302...22,080,918
JBrowse link
G Rps24 ribosomal protein S24 involved_in ISO
ISS
(PMID:18230666), (PMID:18697920), (PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:18230666 PMID:18697920 PMID:34516797 GO_REF:0000024 NCBI chr16:89,538...94,267
Ensembl chr16:89,604...94,279
JBrowse link
G Rps25 ribosomal protein s25 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 8:44,733,623...44,735,999
Ensembl chr 8:44,733,029...44,737,271
JBrowse link
G Rps27 ribosomal protein S27 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 2:175,665,858...175,666,963
Ensembl chr 2:175,665,853...175,666,964
JBrowse link
G Rps27a ribosomal protein S27a involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr14:103,285,734...103,288,011
Ensembl chr14:103,285,734...103,288,011
Ensembl chr 5:103,285,734...103,288,011
JBrowse link
G Rps28 ribosomal protein S28 involved_in ISO
ISS
(PMID:18697920), (PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:18697920 PMID:34516797 GO_REF:0000024 NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170
Ensembl chr16:14,607,801...14,609,170
JBrowse link
G Rps3a ribosomal protein S3a involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 2:171,524,685...171,529,054
Ensembl chr 2:171,524,500...171,529,055
JBrowse link
G Rps4x ribosomal protein S4, X-linked involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr  X:67,298,522...67,302,965
Ensembl chr  X:67,298,525...67,303,019
Ensembl chr 4:67,298,525...67,303,019
JBrowse link
G Rps5 ribosomal protein S5 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 1:73,538,776...73,543,073
Ensembl chr 1:73,538,776...73,543,073
JBrowse link
G Rps6 ribosomal protein S6 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:18697920), (PMID:34516797)
MGI:2176073|MGI:2387471 (PMID:10856218)
GO_REF:0000024
RGD
UniProt
PMID:10856218 PMID:18697920 PMID:34516797 GO_REF:0000024 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602
JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO
IBA
ISS
(PMID:18697920), (PMID:34516797)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:18697920 PMID:34516797 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145
JBrowse link
G Rps8 ribosomal protein S8 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 5:130,630,362...130,632,932
Ensembl chr 5:130,629,716...130,633,268
JBrowse link
G Rps9 ribosomal protein S9 involved_in ISO
IBA
ISS
(PMID:34516797)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:34516797 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:65,511,723...65,515,076
Ensembl chr 1:65,511,723...65,515,123
JBrowse link
G Rps9l1 ribosomal protein S9 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:105,572,159...105,572,766
Ensembl chr  X:105,572,167...105,572,751
JBrowse link
G Rrp36 ribosomal RNA processing 36 involved_in ISO (PMID:20038530) RGD PMID:20038530 NCBI chr 9:14,308,956...14,316,959
Ensembl chr 9:14,308,982...14,316,110
JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 7:114,262,929...114,272,817
Ensembl chr 7:114,256,472...114,272,817
JBrowse link
G Rrp9 ribosomal RNA processing 9, U3 small nucleolar RNA binding protein involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 8:107,116,411...107,126,123
Ensembl chr 8:107,117,471...107,126,123
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872
JBrowse link
G Surf6 surfeit 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:10,221,450...10,232,306
Ensembl chr 3:10,221,452...10,232,251
JBrowse link
G Tbl3 transducin (beta)-like 3 involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372
JBrowse link
G Utp11 UTP11, small subunit processome component involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 5:136,931,279...136,946,164
Ensembl chr 5:136,931,008...136,946,191
JBrowse link
G Utp15 UTP15, small subunit processome component involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr 2:29,594,405...29,612,819
Ensembl chr 2:29,594,941...29,612,773
JBrowse link
G Utp18 UTP18 small subunit processome component involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr10:78,811,879...78,839,338
Ensembl chr10:78,811,880...78,839,627
JBrowse link
G Utp20 UTP20 small subunit processome component involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 7:23,134,630...23,215,639
Ensembl chr 7:23,134,637...23,215,632
JBrowse link
G Utp3 UTP3, small subunit processome component involved_in ISO
ISS
(PMID:34516797)
GO_REF:0000024
RGD
UniProt
PMID:34516797 GO_REF:0000024 NCBI chr14:19,515,716...19,517,370
Ensembl chr14:19,515,669...19,517,396
JBrowse link
G Utp4 UTP4 small subunit processome component involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr19:34,790,962...34,820,558
Ensembl chr19:34,792,457...34,820,550
JBrowse link
G Utp6 UTP6 small subunit processome component involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr10:64,897,321...64,927,997
Ensembl chr10:64,897,328...64,927,997
JBrowse link
G Wdr3 WD repeat domain 3 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 2:187,505,816...187,528,432
Ensembl chr 2:187,505,816...187,528,432
JBrowse link
G Wdr36 WD repeat domain 36 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr18:24,473,657...24,501,773
Ensembl chr18:24,473,663...24,508,092
JBrowse link
G Wdr43 WD repeat domain 43 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846
JBrowse link
G Wdr46 WD repeat domain 46 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr20:4,937,845...4,945,796
Ensembl chr20:4,937,847...4,946,535
JBrowse link
G Wdr75 WD repeat domain 75 involved_in ISO (PMID:34516797) RGD PMID:34516797 NCBI chr 9:47,903,214...47,933,399
Ensembl chr 9:47,903,200...47,933,399
JBrowse link
ribosomal small subunit export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007744.2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:27,601,232...27,601,825 JBrowse link
G AABR07025089.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr16:26,091,905...26,186,434 JBrowse link
G AABR07055527.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:4,352,572...4,353,409 JBrowse link
G Ltv1 LTV1 ribosome biogenesis factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:7,565,673...7,578,398
Ensembl chr 1:7,565,669...7,578,563
JBrowse link
G Nop9 NOP9 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
JBrowse link
G Npm1 nucleophosmin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18809582)
GO_Central
RGD
PMID:18809582 GO_REF:0000033 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nup88 nucleoporin 88 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257
JBrowse link
G Ran RAN, member RAS oncogene family involved_in ISO (PMID:12773398) RGD PMID:12773398 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
JBrowse link
G Rps15 ribosomal protein S15 involved_in ISO (PMID:16037817) RGD PMID:16037817 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450
JBrowse link
G Xpo1 exportin 1 involved_in ISO
IBA
IEA
(PMID:12773398)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:12773398 GO_REF:0000033 GO_REF:0000107 NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498
JBrowse link
ribosomal subunit export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700009N14Rikl RIKEN cDNA 1700009N14 gene like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:54,456,005...54,457,381
Ensembl chr 5:54,455,893...54,457,677
JBrowse link
G Abce1 ATP binding cassette subfamily E member 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:28,205,566...28,230,489
Ensembl chr19:28,205,555...28,230,489
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Eif6-ps1 eukaryotic translation initiation factor 6, pseudogene 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:81,584,117...81,585,052
Ensembl chr14:81,584,160...81,584,897
JBrowse link
G Lsg1 large 60S subunit nuclear export GTPase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:70,132,919...70,168,526
Ensembl chr11:70,143,847...70,168,518
JBrowse link
G Ran RAN, member RAS oncogene family involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
JBrowse link
G Rasl2-9 RAS-like, family 2, locus 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,720,879...68,734,930
Ensembl chr 1:68,720,879...68,722,057
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:17308101)
Ensembl
RGD
PMID:17308101 GO_REF:0000107 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Xpo1 exportin 1 involved_in ISO (PMID:12724356) RGD PMID:12724356 NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498
JBrowse link
ribosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx29 DExH-box helicase 29 involved_in ISO (PMID:20018725) RGD PMID:20018725 NCBI chr 2:44,560,653...44,611,450
Ensembl chr 2:44,560,714...44,611,445
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:30582406) RGD PMID:30582406 NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802
JBrowse link
G Eif1ax eukaryotic translation initiation factor 1A, X-linked involved_in ISO (PMID:35732735) RGD PMID:35732735 NCBI chr  X:35,498,698...35,513,402
Ensembl chr  X:35,498,517...35,513,335
JBrowse link
G Eif2a eukaryotic translation initiation factor 2A involved_in ISO (PMID:12133843) RGD PMID:12133843 NCBI chr 2:142,761,303...142,794,767
Ensembl chr 2:142,761,416...142,795,068
JBrowse link
G Eif5 eukaryotic translation initiation factor 5 involved_in ISO (PMID:10659855) RGD PMID:10659855 NCBI chr 6:130,589,162...130,597,656
Ensembl chr 6:130,589,143...130,597,656
JBrowse link
G Eif5b eukaryotic translation initiation factor 5B involved_in ISO (PMID:10659855), (PMID:35732735) RGD PMID:10659855 PMID:35732735 NCBI chr 9:40,222,769...40,277,482
Ensembl chr 9:40,222,898...40,277,482
JBrowse link
G Mterf4 mitochondrial transcription termination factor 4 acts_upstream_of_or_within ISO MGI:2182095|MGI:5288505 (PMID:21531335) RGD PMID:21531335 NCBI chr 9:93,834,162...93,838,838
Ensembl chr 9:93,834,144...93,838,864
JBrowse link
G Nip7 nucleolar pre-rRNA processing protein NIP7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:34,962,557...34,964,700
Ensembl chr19:34,962,557...34,964,711
JBrowse link
ribosome biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07072440.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr15:16,743,952...16,744,747 JBrowse link
G Aatf apoptosis antagonizing transcription factor acts_upstream_of_or_within ISO MGI:2176283 (PMID:11071758) RGD PMID:11071758 NCBI chr10:69,299,029...69,392,207
Ensembl chr10:69,299,037...69,392,201
JBrowse link
G Abcf1 ATP binding cassette subfamily F member 1 NOT|involved_in ISO
ISS
(PMID:19570978)
GO_REF:0000024
RGD
UniProt
PMID:19570978 GO_REF:0000024 NCBI chr20:2,802,519...2,815,433
Ensembl chr20:2,802,488...2,815,433
JBrowse link
G Cul4a cullin 4A involved_in ISO (PMID:26711351)
(MGI:6294197|PMID:26711351)
RGD PMID:26711351 MGI:6294197 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330
JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:26711351)
(MGI:6294197|PMID:26711351)
RGD PMID:26711351 MGI:6294197 NCBI chr  X:117,287,481...117,326,688
Ensembl chr  X:117,287,484...117,326,688
JBrowse link
G Ddx31 DEAD-box helicase 31 involved_in ISO
IBA
(PMID:23019224)
GO_REF:0000033
RGD
GO_Central
PMID:23019224 GO_REF:0000033 NCBI chr 3:12,172,829...12,238,392
Ensembl chr 3:12,172,836...12,238,873
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:30582406) RGD PMID:30582406 NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802
JBrowse link
G ENSRNOG00000063667 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr10:66,296,696...66,297,324 JBrowse link
G ENSRNOG00000064122 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:144,511,368...144,511,634 JBrowse link
G ENSRNOG00000068836 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:21,678,134...21,679,067 JBrowse link
G ENSRNOG00000069707 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:85,887,875...85,888,977 JBrowse link
G Glul glutamate-ammonia ligase involved_in ISO
IEA
(PMID:26711351)
GO_REF:0000107
RGD
Ensembl
PMID:26711351 GO_REF:0000107 NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108
JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201
JBrowse link
G Gtpbp10 GTP binding protein 10 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 4:28,476,857...28,494,375
Ensembl chr 4:28,476,857...28,494,375
JBrowse link
G Gtpbp4 GTP binding protein 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009
JBrowse link
G Isg20l2 interferon stimulated exonuclease gene 20-like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:173,396,780...173,407,102
Ensembl chr 2:173,396,780...173,406,614
JBrowse link
G LOC134483817 large ribosomal subunit protein eL8-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G LOC134486107 large ribosomal subunit protein eL8-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Ltv1 LTV1 ribosome biogenesis factor involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:7,565,673...7,578,398
Ensembl chr 1:7,565,669...7,578,563
JBrowse link
G Mtg2 mitochondrial ribosome-associated GTPase 2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:167,165,542...167,181,358
Ensembl chr 3:167,165,982...167,181,358
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:57,056,897...57,067,258
Ensembl chr10:57,056,874...57,067,255
JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in ISO
IBA
IEA
ISS
(PMID:16618814)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:16618814 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293
JBrowse link
G Noc4l nucleolar complex associated 4 homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:46,016,077...46,020,615
Ensembl chr12:46,016,069...46,020,614
JBrowse link
G Nvl nuclear VCP-like involved_in ISO
IBA
(PMID:15469983), (PMID:16782053)
GO_REF:0000033
RGD
GO_Central
PMID:15469983 PMID:16782053 GO_REF:0000033 NCBI chr13:92,851,023...92,906,749
Ensembl chr13:92,853,650...92,906,049
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 acts_upstream_of_or_within ISO MGI:2445464 (PMID:12237316) RGD PMID:12237316 NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
JBrowse link
G Rbis ribosomal biogenesis factor involved_in ISO
IBA
(PMID:26711351)
GO_REF:0000033
RGD
GO_Central
PMID:26711351 GO_REF:0000033 NCBI chr 2:86,981,314...86,997,352
Ensembl chr 2:86,991,315...87,041,339
JBrowse link
G Rbisl1 ribosomal biogenesis factor like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:28,706,619...28,706,985 JBrowse link
G Rbisl2 ribosomal biogenesis factor like 2 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 2:190,988,658...190,988,944
Ensembl chr 2:190,988,678...190,988,944
JBrowse link
G Riox2 ribosomal oxygenase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:40,861,365...40,884,782
Ensembl chr11:40,860,774...40,884,574
JBrowse link
G Rpl7a ribosomal protein L7A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:10,239,026...10,241,703
Ensembl chr 3:10,239,001...10,241,716
JBrowse link
G Rps28 ribosomal protein S28 involved_in ISO
ISS
(PMID:24942156)
GO_REF:0000024
RGD
UniProt
PMID:24942156 GO_REF:0000024 NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170
Ensembl chr16:14,607,801...14,609,170
JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor acts_upstream_of_or_within ISO MGI:3584037 (PMID:15989966) RGD PMID:15989966 NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A involved_in ISO (PMID:33199730) RGD PMID:33199730 NCBI chr 7:114,262,929...114,272,817
Ensembl chr 7:114,256,472...114,272,817
JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140
JBrowse link
G Surf6 surfeit 6 acts_upstream_of_or_within ISO (PMID:16855206) RGD PMID:16855206 NCBI chr 3:10,221,450...10,232,306
Ensembl chr 3:10,221,452...10,232,251
JBrowse link
G Urb2 URB2 ribosome biogenesis homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:52,011,019...52,036,607
Ensembl chr19:52,011,112...52,036,597
JBrowse link
G Xpo1 exportin 1 involved_in ISO (PMID:12724356) RGD PMID:12724356 NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498
JBrowse link
G Zfp593 zinc finger protein 593 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:146,462,670...146,464,998
Ensembl chr 5:146,462,670...146,465,198
JBrowse link
RISC complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23622242)
GO_REF:0000107
RGD
Ensembl
PMID:23622242 GO_REF:0000107 NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
JBrowse link
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:19701182), (PMID:19966796), (PMID:23661684)
Ensembl
RGD
PMID:19701182 PMID:19966796 PMID:23661684 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO
ISS
(PMID:17495927)
GO_REF:0000024
RGD
UniProt
PMID:17495927 GO_REF:0000024 NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:17531811) RGD PMID:17531811 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in ISO (PMID:15973356), (PMID:18178619), (PMID:23661684) RGD PMID:15973356 PMID:18178619 PMID:23661684 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in ISO
IEA
(PMID:23661684)
GO_REF:0000107
RGD
Ensembl
PMID:23661684 GO_REF:0000107 NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347
JBrowse link
G Tarbp2 Tarbp2 subunit of RISC loading complex involved_in IEA
ISO
GO_REF:0000104
(PMID:15973356), (PMID:18178619), (PMID:23661684)
UniProt
RGD
PMID:15973356 PMID:18178619 PMID:23661684 GO_REF:0000104 NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
JBrowse link
rRNA (guanine-N7)-methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor involved_in ISO
IBA
(PMID:25851604)
GO_REF:0000033
RGD
GO_Central
PMID:25851604 GO_REF:0000033 NCBI chr12:21,629,551...21,640,758
Ensembl chr12:21,629,536...21,640,751
JBrowse link
G Trmt112 tRNA methyltransferase activator subunit 11-2 involved_in ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 1:204,103,298...204,104,151 JBrowse link
rRNA 2'-O-methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mrm1 mitochondrial rRNA methyltransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:69,690,406...69,697,326
Ensembl chr10:69,690,421...69,696,709
JBrowse link
G Mrm3 mitochondrial rRNA methyltransferase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:61,095,920...61,125,421
Ensembl chr10:61,095,952...61,102,630
JBrowse link
rRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eri1 exoribonuclease 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3838267|PMID:18438418)
UniProt
RGD
PMID:18438418 GO_REF:0000024 MGI:3838267 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
JBrowse link
rRNA acetylation involved in maturation of SSU-rRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nat10 N-acetyltransferase 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:90,111,643...90,149,891
Ensembl chr 3:90,111,645...90,149,927
JBrowse link
rRNA base methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emg1 EMG1 N1-specific pseudouridine methyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540
JBrowse link
G Fdxacb1 ferredoxin-fold anticodon binding domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:51,111,831...51,118,253
Ensembl chr 8:51,113,397...51,118,308
JBrowse link
G Mettl15 methyltransferase 15, mitochondrial 12S rRNA N4-cytidine involved_in ISO
IBA
(PMID:31665743), (PMID:32371392)
GO_REF:0000033
RGD
GO_Central
PMID:31665743 PMID:32371392 GO_REF:0000033 NCBI chr 3:95,586,855...95,764,392
Ensembl chr 3:95,586,850...95,764,397
JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
JBrowse link
G Nop2 NOP2 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459
JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO
IBA
(PMID:31428936), (PMID:31722427)
GO_REF:0000033
(MGI:6414744|PMID:31722427)
RGD
GO_Central
PMID:31428936 PMID:31722427 GO_REF:0000033 MGI:6414744 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272
JBrowse link
rRNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor involved_in ISO
IBA
(PMID:25851604)
GO_REF:0000033
RGD
GO_Central
PMID:25851604 GO_REF:0000033 NCBI chr 2:38,343,086...38,368,242
Ensembl chr 2:38,354,854...38,368,227
JBrowse link
G Fbl fibrillarin involved_in ISO
IEA
IBA
ISS
(PMID:30540930)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
RGD
Ensembl
GO_Central
UniProt
PMID:30540930 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932
JBrowse link
G Fbll1 fibrillarin-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299
JBrowse link
G Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,180,945...91,187,389
Ensembl chr10:91,180,696...91,187,397
JBrowse link
G Mettl5 methyltransferase 5, N6-adenosine involved_in ISO
IBA
(MGI:6505165|PMID:32783360), (MGI:6884948|PMID:35033535)
(PMID:31328227), (PMID:32217665), (PMID:33357433), (PMID:35033535)
GO_REF:0000033
RGD
GO_Central
PMID:31328227 PMID:32217665 PMID:32783360 PMID:33357433 PMID:35033535 GO_REF:0000033 MGI:6505165 MGI:6884948 NCBI chr 3:54,625,790...54,638,066
Ensembl chr 3:54,625,793...54,638,039
JBrowse link
G Mrm2 mitochondrial rRNA methyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:14,309,556...14,314,759
Ensembl chr12:14,251,941...14,314,118
JBrowse link
G Nsun4 NOP2/Sun RNA methyltransferase 4 involved_in ISO
IBA
(PMID:23022348)
GO_REF:0000033
(MGI:5573024|PMID:24516400)
RGD
GO_Central
PMID:23022348 PMID:24516400 GO_REF:0000033 MGI:5573024 NCBI chr 5:129,511,224...129,532,498
Ensembl chr 5:129,512,307...129,532,423
Ensembl chr 5:129,512,307...129,532,423
JBrowse link
G Tfb1m transcription factor B1, mitochondrial involved_in IEA
ISS
IBA
ISO
GO_REF:0000104
GO_REF:0000024
GO_REF:0000033
(PMID:31251801)
(MGI:3843703|PMID:19356719)
UniProt
GO_Central
RGD
PMID:19356719 PMID:31251801 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 MGI:3843703 NCBI chr 1:44,115,240...44,161,737
Ensembl chr 1:44,119,166...44,161,709
JBrowse link
G Tfb2m transcription factor B2, mitochondrial involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr13:91,278,889...91,296,709
Ensembl chr13:91,278,898...91,296,657
JBrowse link
G Trmt112 tRNA methyltransferase activator subunit 11-2 involved_in ISO (PMID:31328227), (PMID:35033535) RGD PMID:31328227 PMID:35033535 NCBI chr 1:204,103,298...204,104,151 JBrowse link
G Zcchc4 zinc finger CCHC-type containing 4 involved_in IEA
IBA
ISS
ISO
GO_REF:0000002
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(PMID:30531910), (PMID:31328227), (PMID:31695039), (PMID:31799605)
InterPro
GO_Central
Ensembl
UniProt
RGD
PMID:30531910 PMID:31328227 PMID:31695039 PMID:31799605 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:58,165,467...58,207,071
Ensembl chr14:58,165,460...58,206,743
JBrowse link
rRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mrm1 mitochondrial rRNA methyltransferase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,690,406...69,697,326
Ensembl chr10:69,690,421...69,696,709
JBrowse link
rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07049043.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 5:97,801,560...97,802,512 JBrowse link
G Ak6 adenylate kinase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:31,794,316...31,806,375
Ensembl chr 2:31,794,519...31,806,371
Ensembl chr20:31,794,519...31,806,371
JBrowse link
G Bop1 BOP1 ribosomal biogenesis factor acts_upstream_of_or_within ISO MGI:1890613 (PMID:10891491), (PMID:15225545) RGD PMID:10891491 PMID:15225545 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
JBrowse link
G Brix1 biogenesis of ribosomes BRX1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:59,450,608...59,461,486
Ensembl chr 2:59,450,614...59,461,495
JBrowse link
G Bysl bystin-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Dcaf13 DDB1 and CUL4 associated factor 13 involved_in ISO (MGI:6509495|PMID:30283081) RGD PMID:30283081 MGI:6509495 NCBI chr 7:70,160,983...70,196,142
Ensembl chr 7:70,160,941...70,196,142
JBrowse link
G Ddx10 DEAD-box helicase 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:53,488,656...53,643,373
Ensembl chr 8:53,488,656...53,643,373
JBrowse link
G Ddx21 DExD-box helicase 21 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:30,534,319...30,554,513
Ensembl chr20:30,534,319...30,554,543
JBrowse link
G Ddx27 DEAD-box helicase 27 involved_in ISO (PMID:25825154) RGD PMID:25825154 NCBI chr 3:155,744,182...155,763,380
Ensembl chr 3:155,744,150...155,763,372
JBrowse link
G Ddx47 DEAD-box helicase 47 involved_in ISO
IBA
(PMID:16963496)
GO_REF:0000033
RGD
GO_Central
PMID:16963496 GO_REF:0000033 NCBI chr 4:167,845,652...167,858,115
Ensembl chr 4:167,845,640...167,859,115
JBrowse link
G Ddx49 DEAD-box helicase 49 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,125,388...19,133,042
Ensembl chr16:19,125,384...19,133,616
JBrowse link
G Ddx52 DExD-box helicase 52 TAS RGD PMID:9154839 RGD:704356 NCBI chr10:68,824,594...68,847,400
Ensembl chr10:68,824,645...68,848,266
JBrowse link
G Ddx54 DEAD-box helicase 54 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,934,713...35,949,956
Ensembl chr12:35,934,716...35,972,523
JBrowse link
G Drosha drosha ribonuclease III involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:61,864,886...61,976,688
Ensembl chr 2:61,864,970...61,976,688
JBrowse link
G Ebna1bp2 EBNA1 binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:132,148,164...132,152,730
Ensembl chr 5:132,148,143...132,153,267
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G ENSRNOG00000062802 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 6:50,647,961...50,648,980 JBrowse link
G ENSRNOG00000063066 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 8:65,669,645...65,670,408 JBrowse link
G Esf1 ESF1 nucleolar pre-rRNA processing protein homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:127,454,744...127,507,941
Ensembl chr 3:127,454,811...127,507,817
JBrowse link
G Exosc3 exosome component 3 involved_in ISO (PMID:11110791) RGD PMID:11110791 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
JBrowse link
G Gar1 GAR1 ribonucleoprotein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:218,375,231...218,382,509
Ensembl chr 2:218,375,353...218,382,524
JBrowse link
G Gemin4 gem (nuclear organelle) associated protein 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:61,062,420...61,073,529
Ensembl chr10:61,066,425...61,073,431
Ensembl chr10:61,066,425...61,073,431
JBrowse link
G Imp3 IMP U3 small nucleolar ribonucleoprotein 3 acts_upstream_of_or_within ISO UniProtKB:P32899 (PMID:12655004) RGD PMID:12655004 NCBI chr 8:57,339,528...57,340,416
Ensembl chr 8:57,339,496...57,340,414
JBrowse link
G Imp4 IMP U3 small nucleolar ribonucleoprotein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:36,654,127...36,659,265
Ensembl chr 9:36,654,401...36,660,075
JBrowse link
G Iqcd IQ motif containing D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,955,522...35,972,420 JBrowse link
G Krr1 KRR1, small subunit processome component homolog involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:47,475,557...47,486,996
Ensembl chr 7:47,475,557...47,486,985
JBrowse link
G Las1l LAS1-like, ribosome biogenesis factor involved_in ISO (PMID:22083961) RGD PMID:22083961 NCBI chr  X:60,851,969...60,873,717
Ensembl chr  X:60,851,962...60,873,687
JBrowse link
G LOC102551819 U3 small nucleolar RNA-associated protein 14 homolog B-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:80,120,622...80,129,166
Ensembl chr 9:80,115,077...80,129,504
JBrowse link
G Lyar Ly1 antibody reactive involved_in ISO
IBA
ISS
IEA
(PMID:24495227)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107
RGD
GO_Central
UniProt
Ensembl
PMID:24495227 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:72,576,878...72,590,854
Ensembl chr14:72,576,879...72,590,612
JBrowse link
G Mettl5 methyltransferase 5, N6-adenosine involved_in ISO (PMID:33428944) RGD PMID:33428944 NCBI chr 3:54,625,790...54,638,066
Ensembl chr 3:54,625,793...54,638,039
JBrowse link
G Mphosph10 M-phase phosphoprotein 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:117,948,134...117,964,149
Ensembl chr 1:117,948,134...117,964,149
JBrowse link
G Mrto4 MRT4 homolog, ribosome maturation factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:151,601,780...151,608,533
Ensembl chr 5:151,601,780...151,608,287
JBrowse link
G Mterf4 mitochondrial transcription termination factor 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:93,834,162...93,838,838
Ensembl chr 9:93,834,144...93,838,864
JBrowse link
G Mtrex Mtr4 exosome RNA helicase involved_in ISO (PMID:29107693) RGD PMID:29107693 NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627
JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293
JBrowse link
G Nol6 nucleolar protein 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:56,259,919...56,270,540
Ensembl chr 5:56,260,830...56,270,336
JBrowse link
G Nol8 nucleolar protein 8 involved_in ISO (PMID:16963496) RGD PMID:16963496 NCBI chr17:14,990,394...15,013,784
Ensembl chr17:14,990,417...15,013,848
JBrowse link
G Nop10l1 NOP10 ribonucleoprotein like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:68,656,172...68,656,369
Ensembl chr 3:68,656,172...68,656,363
JBrowse link
G Nop2 NOP2 nucleolar protein involved_in ISO (PMID:36161484) RGD PMID:36161484 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902
JBrowse link
G Npm3 nucleophosmin/nucleoplasmin, 3 acts_upstream_of_or_within ISO (PMID:15596447) RGD PMID:15596447 NCBI chr 1:244,595,638...244,597,623
Ensembl chr 1:244,595,644...244,597,591
JBrowse link
G Nsa2 NSA2 ribosome biogenesis factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:28,443,142...28,449,393
Ensembl chr 2:28,441,269...28,449,388
JBrowse link
G Nvl nuclear VCP-like involved_in ISO (PMID:29107693) RGD PMID:29107693 NCBI chr13:92,851,023...92,906,749
Ensembl chr13:92,853,650...92,906,049
JBrowse link
G Pa2g4 proliferation-associated 2G4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:984,795...992,264
Ensembl chr 7:983,971...992,331
JBrowse link
G Pdcd11 programmed cell death 11 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:245,980,840...246,021,999
Ensembl chr 1:245,980,880...246,021,999
JBrowse link
G Pelp1 proline, glutamate and leucine rich protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,094,798...55,111,833
Ensembl chr10:55,094,796...55,111,994
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 acts_upstream_of_or_within ISO (PMID:16738141)
MGI:1334460 (PMID:15225545)
RGD PMID:15225545 PMID:16738141 NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Pih1d2 PIH1 domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:50,966,885...50,976,901
Ensembl chr 8:50,966,885...50,975,656
JBrowse link
G Pin4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 involved_in ISO
IBA
(PMID:19369196)
GO_REF:0000033
RGD
GO_Central
PMID:19369196 GO_REF:0000033 NCBI chr  X:67,232,066...67,238,709
Ensembl chr  X:67,232,081...67,238,702
JBrowse link
G Pop4 POP4 homolog, ribonuclease P/MRP subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:90,960,026...90,968,360
Ensembl chr 1:90,960,022...90,968,443
JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336
JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674
JBrowse link
G Ppan peter pan homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:19,423,908...19,427,941
Ensembl chr 8:19,423,961...19,427,938
JBrowse link
G Pwp1 PWP1 homolog, endonuclein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:17,982,730...17,998,728
Ensembl chr 7:17,982,235...17,998,731
JBrowse link
G Rbfa ribosome binding factor A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:73,639,264...73,648,914
Ensembl chr18:73,639,260...73,648,915
JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:10,280,654...10,291,003
Ensembl chr 3:10,280,654...10,290,996
JBrowse link
G Rnasel ribonuclease L IDA RGD PMID:8469023 RGD:2291995 NCBI chr13:65,894,990...65,910,354
Ensembl chr13:65,901,459...65,908,704
JBrowse link
G Rpf1 ribosome production factor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:235,403,020...235,417,546
Ensembl chr 2:235,403,021...235,417,807
JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rpl14 ribosomal protein L14 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 8:120,286,035...120,289,160
Ensembl chr 8:120,284,645...120,289,064
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
JBrowse link
G Rpl27 ribosomal protein L27 involved_in ISO
ISS
(PMID:25424902)
GO_REF:0000024
RGD
UniProt
PMID:25424902 GO_REF:0000024 NCBI chr10:86,375,511...86,379,210
Ensembl chr10:86,375,454...86,379,193
JBrowse link
G Rpl35a ribosomal protein L35A involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr11:67,726,031...67,729,953
Ensembl chr11:67,726,032...67,729,942
Ensembl chr 5:67,726,032...67,729,942
JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Rpl7 ribosomal protein L7 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 5:3,217,184...3,220,192 JBrowse link
G Rpp25 ribonuclease P and MRP subunit p25 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:57,907,352...57,908,732
Ensembl chr 8:57,907,352...57,908,732
JBrowse link
G Rps15 ribosomal protein S15 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450
JBrowse link
G Rps16 ribosomal protein S16 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
JBrowse link
G Rps17 ribosomal protein S17 involved_in ISO (PMID:18697920) RGD PMID:18697920 NCBI chr 1:135,295,920...135,298,506
Ensembl chr 1:135,295,919...135,298,535
Ensembl chr 8:135,295,919...135,298,535
JBrowse link