Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Rps27 (ribosomal protein S27) Rattus norvegicus
Analyze
Symbol: Rps27
Name: ribosomal protein S27
Description: Predicted to have RNA binding activity. Predicted to be involved in rRNA processing and ribosomal small subunit assembly. Localizes to several cellular components, including GABA-ergic synapse; cytosolic small ribosomal subunit; and glutamatergic synapse. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 17. Orthologous to human RPS27 (ribosomal protein S27); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 2,6-dinitrotoluene; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 40S ribosomal protein S27
Orthologs:
Homo sapiens (human) : RPS27 (ribosomal protein S27)  HGNC  Alliance
Mus musculus (house mouse) : Rps27rt (ribosomal protein S27, retrogene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rps27 (ribosomal protein S27)
Pan paniscus (bonobo/pygmy chimpanzee) : RPS27 (ribosomal protein S27)
Canis lupus familiaris (dog) : RPS27 (ribosomal protein S27)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rps27 (ribosomal protein S27)
Sus scrofa (pig) : LOC100525613 (40S ribosomal protein S27-like)
Chlorocebus sabaeus (African green monkey) : RPS27 (ribosomal protein S27)
Heterocephalus glaber (naked mole-rat) : Rps27 (ribosomal protein S27)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02189,572,175 - 189,573,280 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2189,572,176 - 189,573,280 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02209,004,972 - 209,006,077 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42182,451,529 - 182,452,634 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12182,401,634 - 182,402,740 (-)NCBI
Celera2169,601,903 - 169,603,008 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Rps27
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621045
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.