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Gene: U2af2 (U2 small nuclear RNA auxiliary factor 2) Rattus norvegicus
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Symbol: U2af2
Name: U2 small nuclear RNA auxiliary factor 2
Description: Predicted to have C2H2 zinc finger domain binding activity; RNA binding activity; and enzyme binding activity. Predicted to be involved in mRNA splicing, via spliceosome; negative regulation of protein ubiquitination; and regulation of RNA splicing. Predicted to colocalize with the Prp19 complex. Orthologous to human U2AF2 (U2 small nuclear RNA auxiliary factor 2); PARTICIPATES IN spliceosome pathway; INTERACTS WITH bisphenol A; gentamycin; glyphosate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC308335; splicing factor U2AF 65 kDa subunit; U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
Orthologs:
Homo sapiens (human) : U2AF2 (U2 small nuclear RNA auxiliary factor 2)  HGNC  Alliance
Mus musculus (house mouse) : U2af2 (U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : U2af2 (U2 small nuclear RNA auxiliary factor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : U2AF2 (U2 small nuclear RNA auxiliary factor 2)
Canis lupus familiaris (dog) : U2AF2 (U2 small nuclear RNA auxiliary factor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : U2af2 (U2 small nuclear RNA auxiliary factor 2)
Sus scrofa (pig) : U2AF2 (U2 small nuclear RNA auxiliary factor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0172,312,260 - 72,329,828 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl172,312,727 - 72,329,856 (-)Ensembl
Rnor_5.0176,206,254 - 76,223,269 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4167,498,102 - 67,517,118 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1167,576,224 - 67,595,267 (-)NCBI
Celera168,340,744 - 68,358,089 (+)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on U2af2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310690
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.