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Gene: Ddx46 (DEAD-box helicase 46) Rattus norvegicus
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Symbol: Ddx46
Name: DEAD-box helicase 46
Description: Predicted to have RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Localizes to the nucleus. Orthologous to human DDX46 (DEAD-box helicase 46); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46; DEAD box protein 46; helicase of 117.4 kDa; LOC245957; probable ATP-dependent RNA helicase DDX46; RNA helicase
Orthologs:
Homo sapiens (human) : DDX46 (DEAD-box helicase 46)  HGNC  Alliance
Mus musculus (house mouse) : Ddx46 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 46)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddx46 (DEAD-box helicase 46)
Pan paniscus (bonobo/pygmy chimpanzee) : DDX46 (DEAD-box helicase 46)
Canis lupus familiaris (dog) : DDX46 (DEAD-box helicase 46)
Sus scrofa (pig) : DDX46 (DEAD-box helicase 46)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0179,475,275 - 9,519,545 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,475,538 - 9,519,595 (-)Ensembl
Rnor_5.01711,582,729 - 11,626,991 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41714,985,633 - 15,029,607 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11714,985,632 - 15,029,607 (-)NCBI
Celera179,026,373 - 9,070,389 (-)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ddx46
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 708480
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.