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Gene: Prpf18 (pre-mRNA processing factor 18) Rattus norvegicus
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Symbol: Prpf18
Name: pre-mRNA processing factor 18
RGD ID: 708550
Description: Involved in negative regulation of cellular protein metabolic process. Localizes to membrane. Orthologous to human PRPF18 (pre-mRNA processing factor 18); PARTICIPATES IN spliceosome pathway; INTERACTS WITH ammonium chloride; bisphenol A; Tributyltin oxide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: KCRF; LOC171552; potassium channel regulatory factor; Pprf18; pre-mRNA-splicing factor 18; PRP18 homolog; PRP18 pre-mRNA processing factor 18 homolog; PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae); PRP18 pre-mRNA processing factor 18 homolog (yeast)
Orthologs:
Homo sapiens (human) : PRPF18 (pre-mRNA processing factor 18)  HGNC  Alliance
Mus musculus (house mouse) : Prpf18 (pre-mRNA processing factor 18)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prpf18 (pre-mRNA processing factor 18)
Pan paniscus (bonobo/pygmy chimpanzee) : PRPF18 (pre-mRNA processing factor 18)
Canis lupus familiaris (dog) : PRPF18 (pre-mRNA processing factor 18)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prpf18 (pre-mRNA processing factor 18)
Sus scrofa (pig) : PRPF18 (pre-mRNA processing factor 18)
Chlorocebus sabaeus (African green monkey) : PRPF18 (pre-mRNA processing factor 18)
Heterocephalus glaber (naked mole-rat) : Prpf18 (pre-mRNA processing factor 18)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01777,601,914 - 77,632,507 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1777,601,877 - 77,663,980 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01779,256,708 - 79,287,301 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41784,741,279 - 84,773,449 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1773,067,705 - 73,098,132 (+)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prpf18
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 708550
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.