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Gene: Isy1 (ISY1 splicing factor homolog) Rattus norvegicus
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Symbol: Isy1
Name: ISY1 splicing factor homolog
RGD ID: 1307688
Description: Predicted to be involved in generation of catalytic spliceosome for second transesterification step and mRNA 3'-splice site recognition. Predicted to localize to Prp19 complex and spliceosomal complex. Orthologous to several human genes including ISY1-RAB43 (ISY1-RAB43 readthrough); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ISY1 splicing factor homolog (S. cerevisiae); Isy1-rab43; ISY1-RAB43 readthrough; LOC362394; pre-mRNA-splicing factor ISY1 homolog; RGD1307688; similar to RIKEN cDNA 5830446M03
Orthologs:
Homo sapiens (human) : ISY1 (ISY1 splicing factor homolog)  HGNC  Alliance
Mus musculus (house mouse) : Isy1 (ISY1 splicing factor homolog)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Isy1 (ISY1 splicing factor homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : ISY1 (ISY1 splicing factor homolog)
Canis lupus familiaris (dog) : ISY1 (ISY1 splicing factor homolog)
Chlorocebus sabaeus (African green monkey) : ISY1 (ISY1 splicing factor homolog)
Heterocephalus glaber (naked mole-rat) : Isy1 (ISY1 splicing factor homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04119,721,659 - 119,742,349 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4119,721,660 - 119,742,349 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04184,972,994 - 184,993,684 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44122,006,785 - 122,027,475 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14122,251,266 - 122,271,956 (-)NCBI
Celera4109,237,067 - 109,257,757 (-)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Isy1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307688
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.