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Gene: Slu7 (SLU7 homolog, splicing factor) Rattus norvegicus
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Symbol: Slu7
Name: SLU7 homolog, splicing factor
RGD ID: 631432
Description: Predicted to have pre-mRNA 3'-splice site binding activity; second spliceosomal transesterification activity; and zinc ion binding activity. Predicted to be involved in cellular response to heat; intracellular protein transport; and mRNA splicing, via spliceosome. Predicted to localize to cytosol and nucleus. Orthologous to human SLU7 (SLU7 homolog, splicing factor); PARTICIPATES IN spliceosome pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: DNA segment, Chr 11, ERATO Doi 730, expressed; DNA segment, Chr 3, Brigham & Womens Genetics 0878 expressed; LOC303057; pre-mRNA-splicing factor SLU7; similar to step II splicing factor SLU7; SLU7 splicing factor homolog; SLU7 splicing factor homolog (S. cerevisiae); step II splicing factor SLU7; step II splicing factor SLU7 (S. cerevisiae)
Orthologs:
Homo sapiens (human) : SLU7 (SLU7 homolog, splicing factor)  HGNC  Alliance
Mus musculus (house mouse) : Slu7 (SLU7 splicing factor homolog (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slu7 (SLU7 homolog, splicing factor)
Pan paniscus (bonobo/pygmy chimpanzee) : SLU7 (SLU7 homolog, splicing factor)
Canis lupus familiaris (dog) : SLU7 (SLU7 homolog, splicing factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slu7 (SLU7 homolog, splicing factor)
Sus scrofa (pig) : SLU7 (SLU7 homolog, splicing factor)
Chlorocebus sabaeus (African green monkey) : SLU7 (SLU7 homolog, splicing factor)
Heterocephalus glaber (naked mole-rat) : Slu7 (SLU7 homolog, splicing factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01029,029,556 - 29,044,919 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1029,029,590 - 29,044,583 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01028,871,433 - 28,886,835 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41028,536,630 - 28,551,427 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11028,537,678 - 28,550,757 (+)NCBI
Celera1027,401,434 - 27,416,356 (+)NCBICelera
Cytogenetic Map10q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Slu7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 631432
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.