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Gene: Snrpf (small nuclear ribonucleoprotein polypeptide F) Rattus norvegicus
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Symbol: Snrpf
Name: small nuclear ribonucleoprotein polypeptide F
Description: Predicted to have RNA binding activity. Predicted to be involved in spliceosomal snRNP assembly. Predicted to localize to the cytoplasm and nucleus. Orthologous to human SNRPF (small nuclear ribonucleoprotein polypeptide F); PARTICIPATES IN spliceosome pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC680737; similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF); small nuclear ribonucleoprotein F
Orthologs:
Homo sapiens (human) : SNRPF (small nuclear ribonucleoprotein polypeptide F)  HGNC  Alliance
Mus musculus (house mouse) : Snrpf (small nuclear ribonucleoprotein polypeptide F)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snrpf (small nuclear ribonucleoprotein polypeptide F)
Pan paniscus (bonobo/pygmy chimpanzee) : SNRPF (small nuclear ribonucleoprotein polypeptide F)
Canis lupus familiaris (dog) : SNRPF (small nuclear ribonucleoprotein polypeptide F)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snrpf (small nuclear ribonucleoprotein polypeptide F)
Sus scrofa (pig) : SNRPF (small nuclear ribonucleoprotein polypeptide F)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0734,478,331 - 34,485,034 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0734,543,253 - 34,549,956 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4730,644,564 - 30,651,266 (-)NCBIRGSC3.4rn4RGSC3.4
Celera725,229,126 - 25,235,828 (-)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snrpf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1588229
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.