Gene: Snrnp200 (small nuclear ribonucleoprotein U5 subunit 200) Rattus norvegicus
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Symbol: Snrnp200
Name: small nuclear ribonucleoprotein U5 subunit 200
Description: Predicted to have ATP-dependent RNA helicase activity and identical protein binding activity; predicted to be involved in spliceosome conformational change to release U4 (or U4atac) and U1 (or U11); predicted to localize to the intracellular organelle; orthologous to human SNRNP200 (small nuclear ribonucleoprotein U5 subunit 200); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; cocaine.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: activating signal cointegrator 1 complex subunit 3-like 1; Ascc3l1; BRR2 homolog; LOC296126; MGC116386; similar to U5 snRNP-specific protein, 200 kDa; small nuclear ribonucleoprotein 200 (U5); U5 small nuclear ribonucleoprotein 200 kDa helicase; U5 snRNP-specific 200 kDa protein; U5-200KD
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03119,640,324 - 119,669,651 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03126,165,542 - 126,194,869 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43114,708,628 - 114,738,549 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3113,269,406 - 113,298,872 (+)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Snrnp200
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561120
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-06-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.