Gene: Snrpe (small nuclear ribonucleoprotein polypeptide E) Rattus norvegicus
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Symbol: Snrpe
Name: small nuclear ribonucleoprotein polypeptide E
Description: ENCODES a protein that exhibits U1 snRNP binding; INVOLVED IN hair cycle (ortholog); mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH lupus nephritis; hepatocellular carcinoma (ortholog); hypogonadism (ortholog); FOUND IN nucleus; U1 snRNP; catalytic step 2 spliceosome (ortholog); INTERACTS WITH bisphenol A; gentamycin; PhIP
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC100360682; small nuclear ribonucleoprotein E
Orthologs:
Homo sapiens (human) : SNRPE (small nuclear ribonucleoprotein polypeptide E)  HGNC  Alliance
Mus musculus (house mouse) : Snrpe (small nuclear ribonucleoprotein E)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snrpe (small nuclear ribonucleoprotein polypeptide E)
Pan paniscus (bonobo/pygmy chimpanzee) : SNRPE (small nuclear ribonucleoprotein polypeptide E)
Canis lupus familiaris (dog) : SNRPE (small nuclear ribonucleoprotein polypeptide E)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snrpe (small nuclear ribonucleoprotein polypeptide E)
more info ...
Related Pseudogenes: Snrpel  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01350,252,707 - 50,258,951 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01355,306,370 - 55,312,614 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41346,522,340 - 46,528,589 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1345,383,253 - 45,389,497 (-)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

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Gene Ontology Annotations
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References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Snrpe
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2321675
Created: 2010-05-06
Species: Rattus norvegicus
Last Modified: 2018-08-14
Status: ACTIVE



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