Gene: Scaf11 (SR-related CTD-associated factor 11) Rattus norvegicus
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Symbol: Scaf11
Name: SR-related CTD-associated factor 11
Description: INVOLVED IN RNA splicing (ortholog); RNA splicing, via transesterification reactions (ortholog); spliceosomal complex assembly (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; diuron
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC312030; serine/arginine-rich splicing factor 2, interacting protein; SFRS2-interacting protein; Sfrs2ip; similar to splicing factor, arginine/serine-rich 2, interacting protein; splicing factor, arginine/serine-rich 2, interacting protein; Srsf2ip
Orthologs:
Homo sapiens (human) : SCAF11 (SR-related CTD associated factor 11)  HGNC  Alliance
Mus musculus (house mouse) : Scaf11 (SR-related CTD-associated factor 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scaf11 (SR-related CTD associated factor 11)
Pan paniscus (bonobo/pygmy chimpanzee) : SCAF11 (SR-related CTD associated factor 11)
Canis lupus familiaris (dog) : SCAF11 (SR-related CTD associated factor 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scaf11 (SR-related CTD associated factor 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07137,804,019 - 137,856,337 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07137,436,043 - 137,488,361 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47135,088,641 - 135,138,269 (-)NCBIRGSC3.4rn4RGSC3.4
Celera7124,076,710 - 124,128,927 (-)NCBICelera
Cytogenetic Map7q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Scaf11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1598325
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE