Gene: Ncbp1 (nuclear cap binding protein subunit 1) Rattus norvegicus
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Symbol: Ncbp1
Name: nuclear cap binding protein subunit 1
Description: ENCODES a protein that exhibits RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); mRNA export from nucleus (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; RNA polymerase II transcription elongation pathway; mRNA decay pathway; FOUND IN nuclear cap binding complex; nucleus; cytosol (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 80 kDa nuclear cap-binding protein; CBP80; LOC298075; MGC105807; NCBP 80 kDa subunit; nuclear cap binding protein subunit 1, 80kDa; nuclear cap-binding protein subunit 1
Orthologs:
Homo sapiens (human) : NCBP1 (nuclear cap binding protein subunit 1)  HGNC  Alliance
Mus musculus (house mouse) : Ncbp1 (nuclear cap binding protein subunit 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ncbp1 (nuclear cap binding protein subunit 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NCBP1 (nuclear cap binding protein subunit 1)
Canis lupus familiaris (dog) : NCBP1 (nuclear cap binding protein subunit 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ncbp1 (nuclear cap binding protein subunit 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0561,734,118 - 61,767,098 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0566,250,579 - 66,283,560 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4562,691,068 - 62,723,436 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1562,691,246 - 62,723,612 (+)NCBI
Celera558,976,747 - 59,009,113 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ncbp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308973
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-08-14
Status: ACTIVE