Gene: Znhit6 (zinc finger, HIT-type containing 6) Rattus norvegicus
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Symbol: Znhit6
Name: zinc finger, HIT-type containing 6
Description: ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); protein complex oligomerization (ortholog); snoRNA localization (ortholog); FOUND IN pre-snoRNP complex (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; finasteride
AGR Description: Predicted to have ATPase binding activity, TFIID-class transcription factor complex binding activity, and identical protein binding activity; predicted to be involved in several processes, including box C/D snoRNP assembly, maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), and protein complex oligomerization; predicted to localize to the nucleus and pre-snoRNP complex; orthologous to human ZNHIT6 (zinc finger HIT-type containing 6).
Merged Description: Predicted to have ATPase binding activity, TFIID-class transcription factor complex binding activity, and identical protein binding activity; predicted to be involved in several processes, including box C/D snoRNP assembly, maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), and protein complex oligomerization; predicted to localize to the nucleus and pre-snoRNP complex; orthologous to human ZNHIT6 (zinc finger HIT-type containing 6); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; finasteride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: box C/D snoRNA protein 1; LOC292160; RGD1308723; similar to hypothetical protein FLJ20729; zinc finger, HIT type 6
Orthologs:
Homo sapiens (human) : ZNHIT6 (zinc finger HIT-type containing 6)  HGNC  Alliance
Mus musculus (house mouse) : Znhit6 (zinc finger, HIT type 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Znhit6 (zinc finger HIT-type containing 6)
Pan paniscus (bonobo/pygmy chimpanzee) : ZNHIT6 (zinc finger HIT-type containing 6)
Canis lupus familiaris (dog) : ZNHIT6 (zinc finger HIT-type containing 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Znhit6 (zinc finger HIT-type containing 6)
Sus scrofa (pig) : ZNHIT6 (zinc finger HIT-type containing 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02251,453,503 - 251,484,760 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02269,981,414 - 270,012,985 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42243,746,296 - 243,778,317 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12243,732,952 - 243,764,916 (+)NCBI
Celera2226,474,975 - 226,506,057 (+)NCBICelera
Cytogenetic Map2q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Znhit6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308723
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.