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Gene: Rpf2 (ribosome production factor 2 homolog) Rattus norvegicus
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Symbol: Rpf2
Name: ribosome production factor 2 homolog
Description: Predicted to have 5S rRNA binding activity. Predicted to be involved in protein localization to nucleolus; regulation of signal transduction by p53 class mediator; and ribosomal large subunit biogenesis. Predicted to localize to the nucleolus. Orthologous to human RPF2 (ribosome production factor 2 homolog); INTERACTS WITH (+)-schisandrin B; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: brix domain containing 1; Bxdc1; LOC294436; ribosome production factor 2 homolog (S. cerevisiae)
Orthologs:
Homo sapiens (human) : RPF2 (ribosome production factor 2 homolog)  HGNC  Alliance
Mus musculus (house mouse) : Rpf2 (ribosome production factor 2 homolog)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rpf2 (ribosome production factor 2 homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : RPF2 (ribosome production factor 2 homolog)
Canis lupus familiaris (dog) : RPF2 (ribosome production factor 2 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rpf2 (ribosome production factor 2 homolog)
Sus scrofa (pig) : RPF2 (ribosome production factor 2 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02045,321,381 - 45,342,865 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02047,041,336 - 47,062,600 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42044,388,637 - 44,410,093 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12044,411,626 - 44,433,112 (-)NCBI
Celera2044,336,784 - 44,358,198 (-)NCBICelera
Cytogenetic Map20q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rpf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306906
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.