Gene: Sf3a3 (splicing factor 3a, subunit 3) Rattus norvegicus
Analyze
Symbol: Sf3a3
Name: splicing factor 3a, subunit 3
Description: ENCODES a protein that exhibits zinc ion binding (inferred); INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate C (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog); INTERACTS WITH 2,4-dinitrotoluene; acrylamide; bisphenol A
AGR Description: Predicted to have RNA binding activity; predicted to be involved in U2-type prespliceosome assembly; predicted to localize to the intracellular organelle; orthologous to human SF3A3 (splicing factor 3a subunit 3).
Merged Description: Predicted to have RNA binding activity; predicted to be involved in U2-type prespliceosome assembly; predicted to localize to the intracellular organelle; orthologous to human SF3A3 (splicing factor 3a subunit 3); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 2,4-dinitrotoluene; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC313583; LRRGT00093; MGC116354; splicing factor 3A subunit 3
Orthologs:
Homo sapiens (human) : SF3A3 (splicing factor 3a subunit 3)  HGNC  Alliance
Mus musculus (house mouse) : Sf3a3 (splicing factor 3a, subunit 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sf3a3 (splicing factor 3a subunit 3)
Pan paniscus (bonobo/pygmy chimpanzee) : SF3A3 (splicing factor 3a subunit 3)
Canis lupus familiaris (dog) : SF3A3 (splicing factor 3a subunit 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sf3a3 (splicing factor 3a subunit 3)
Sus scrofa (pig) : SF3A3 (splicing factor 3a subunit 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05142,702,721 - 142,722,350 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05146,473,837 - 146,493,467 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45144,040,061 - 144,059,690 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15144,050,053 - 144,069,683 (+)NCBI
Celera5135,491,031 - 135,510,199 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sf3a3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308726
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.