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ONTOLOGY REPORT - ANNOTATIONS


Term:response to decreased oxygen levels
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Accession:GO:0036293 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.
Comment:This term should be used when a decrease in oxygen levels is not considered a stress response. For a hypoxic stress response, consider instead 'response to hypoxia ; GO:0001666'.
Synonyms:exact_synonym: response to lowered oxygen levels


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response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 acts_upstream_of_or_within ISO (PMID:20935152) MGI PMID:20935152 NCBI chrNW_004936548:4,983,461...5,110,693
Ensembl chrNW_004936548:4,987,847...5,108,104
JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:22343710) MGI PMID:22343710 NCBI chrNW_004936778:515,600...530,828 JBrowse link
G Nppc natriuretic peptide C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:5,092,675...5,099,344
Ensembl chrNW_004936525:5,092,635...5,099,331
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25350110) Ensembl
MGI
PMID:25350110 GO_REF:0000107 NCBI chrNW_004936503:613,250...690,555
Ensembl chrNW_004936503:613,223...690,721
JBrowse link
G Slc39a12 solute carrier family 39 member 12 ISO RGD PMID:26258299 RGD:10401832 NCBI chrNW_004936520:9,380,723...9,444,146
Ensembl chrNW_004936520:9,380,650...9,444,152
JBrowse link
cellular response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator ISO RGD PMID:14975182 RGD:1599599 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:12194824 RGD:8553742 NCBI chrNW_004936501:7,160,134...7,205,231
Ensembl chrNW_004936501:7,160,134...7,207,377
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:18614764 RGD:2301848 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Pdcd10 programmed cell death 10 ISO RGD PMID:22482882 RGD:401827112 NCBI chrNW_004936593:4,650,624...4,693,387
Ensembl chrNW_004936593:4,651,114...4,692,534
JBrowse link
cellular response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24875179) Ensembl
MGI
PMID:24875179 GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in ISO PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chrNW_004936609:1,793,027...1,858,586
Ensembl chrNW_004936609:1,793,027...1,858,597
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in ISO PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chrNW_004936492:3,098,196...3,115,921
Ensembl chrNW_004936492:3,097,629...3,116,526
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:24875179) MGI PMID:24875179 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chrNW_004936487:19,331,183...19,386,841
Ensembl chrNW_004936487:19,331,194...19,386,892
JBrowse link
cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa2 acetyl-CoA acyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:13,242,644...13,269,007
Ensembl chrNW_004936497:13,242,644...13,269,532
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,389,925...19,403,577
Ensembl chrNW_004936486:19,391,324...19,402,332
JBrowse link
G Ado 2-aminoethanethiol dioxygenase involved_in ISO (PMID:31273118) UniProt PMID:31273118 NCBI chrNW_004936753:1,965,840...1,969,554 JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:19098126 RGD:8548506 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210
JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO oxygen-glucose deprivation RGD PMID:14526224 RGD:10047409 NCBI chrNW_004936479:1,441,508...1,477,133
Ensembl chrNW_004936479:1,441,437...1,478,107
JBrowse link
G Ak4 adenylate kinase 4 involved_in
acts_upstream_of
ISO (PMID:30696468)
(PMID:19130895), (PMID:23474458), (PMID:26980435)
UniProt PMID:19130895 PMID:23474458 PMID:26980435 PMID:30696468 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:20515660 RGD:5509097 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093
JBrowse link
G Angpt4 angiopoietin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:17,675,948...17,710,512
Ensembl chrNW_004936485:17,675,948...17,710,272
JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO RGD PMID:19299913 RGD:5133278 NCBI chrNW_004936601:3,502,844...3,510,919
Ensembl chrNW_004936601:3,502,844...3,511,003
JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:7,146,997...7,160,369
Ensembl chrNW_004936478:7,147,027...7,160,401
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24462679) MGI
Ensembl
PMID:24462679 GO_REF:0000107 NCBI chrNW_004936524:1,963,427...1,969,977
Ensembl chrNW_004936524:1,963,247...1,969,998
JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:11097477 RGD:1599264 NCBI chrNW_004936543:7,688,788...7,699,842
Ensembl chrNW_004936543:7,688,741...7,699,851
JBrowse link
G Atf4 activating transcription factor 4 ISO oxygen-glucose deprivation RGD PMID:20444431 RGD:13464322 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO RGD PMID:29300489 RGD:13792656 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:21346155 RGD:11341705 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 ISO RGD PMID:21400481 RGD:14390075 NCBI chrNW_004936684:1,252,874...1,275,469
Ensembl chrNW_004936684:1,265,502...1,273,953
JBrowse link
G Bad BCL2 associated agonist of cell death involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:4,924,349...4,933,683
Ensembl chrNW_004936599:4,924,789...4,933,368
JBrowse link
G Bbc3 BCL2 binding component 3 involved_in ISO (PMID:20810912) UniProt PMID:20810912 NCBI chrNW_004936664:962,115...966,797 JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
with serum deprivation
(PMID:7595537)
RGD
MGI
Ensembl
PMID:7595537 PMID:20669351 GO_REF:0000107 RGD:11353793 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Bcl2l1 BCL2 like 1 ISO with serum deprivation RGD PMID:20669351 RGD:11353793 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Bdkrb2 bradykinin receptor B2 ISO RGD PMID:19565561 RGD:4891057 NCBI chrNW_004936604:548,844...551,031
Ensembl chrNW_004936604:548,847...549,956
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:19273585) RGD
Ensembl
MGI
PMID:17379825 PMID:19273585 GO_REF:0000107 RGD:9685412 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927
JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 NCBI chrNW_004936757:499,485...523,494
Ensembl chrNW_004936757:499,147...523,541
JBrowse link
G Brip1 BRCA1 interacting helicase 1 ISO RGD PMID:12511571 RGD:11251702 NCBI chrNW_004936490:3,001,445...3,139,538
Ensembl chrNW_004936490:3,003,484...3,137,479
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ISO oxygen-glucose deprivation RGD PMID:23421680 RGD:13514095 NCBI chrNW_004936512:6,652,836...6,666,171
Ensembl chrNW_004936512:6,653,777...6,666,758
JBrowse link
G Casr calcium sensing receptor ISO RGD PMID:21073657 RGD:7206834 NCBI chrNW_004936536:8,574,064...8,599,446
Ensembl chrNW_004936536:8,574,064...8,599,454
JBrowse link
G Cav1 caveolin 1 ISO RGD PMID:29069575 RGD:151347449 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
JBrowse link
G Cbl Cbl proto-oncogene ISO oxygen-glucose deprivation RGD PMID:24229686 RGD:11038824 NCBI chrNW_004936542:4,136,389...4,235,746
Ensembl chrNW_004936542:4,136,511...4,228,288
JBrowse link
G Cbs cystathionine beta-synthase involved_in ISO PMID:20149843 UniProt PMID:20149843 RGD:8554341 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388
JBrowse link
G Ccn1 cellular communication network factor 1 ISO RGD PMID:30371213 RGD:329845516 NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358
JBrowse link
G Ccna2 cyclin A2 ISO RGD PMID:25289051 RGD:10054493 NCBI chrNW_004936662:1,073,460...1,079,136
Ensembl chrNW_004936662:1,073,920...1,079,136
JBrowse link
G Ccnb1 cyclin B1 ISO RGD PMID:12374461 RGD:2316579 NCBI chrNW_004936480:400,287...407,677
Ensembl chrNW_004936480:399,224...407,704
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO RGD PMID:28854428 RGD:152025191 NCBI chrNW_004936587:4,573,166...4,578,480
Ensembl chrNW_004936587:4,572,728...4,578,461
JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:12031707 RGD:8663470 NCBI chrNW_004936726:381,888...425,565
Ensembl chrNW_004936726:381,835...423,311
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Clca1 chloride channel accessory 1 ISO RGD PMID:18616988 RGD:4188872 NCBI chrNW_004936865:155,284...188,988 JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (PMID:18752464)
(MGI:5543770|PMID:18752464)
UniProt PMID:18752464 MGI:5543770 NCBI chrNW_004936483:17,216,288...17,296,430
Ensembl chrNW_004936483:17,216,213...17,294,534
JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISO (PMID:18752464)
(MGI:5543770|PMID:18752464)
UniProt PMID:18752464 MGI:5543770 NCBI chrNW_004936477:12,727,325...12,798,733 JBrowse link
G Cysltr1 cysteinyl leukotriene receptor 1 ISO oxygen-glucose deprivation RGD PMID:17910051 RGD:5144007 NCBI chrNW_004936547:479,261...504,757 JBrowse link
G Cysltr2 cysteinyl leukotriene receptor 2 ISO oxygen-glucose deprivation RGD PMID:17910051 RGD:5144007 NCBI chrNW_004936565:1,917,970...1,919,027 JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO RGD PMID:18664364 RGD:150429768 NCBI chrNW_004936831:799,948...946,139
Ensembl chrNW_004936831:865,965...946,139
JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO oxygen-glucose deprivation RGD PMID:26294080 RGD:11553310 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO oxygen-glucose deprivation RGD PMID:30653356 RGD:155663383 NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253
JBrowse link
G Dnm1l dynamin 1 like ISO oxygen-glucose deprivation RGD PMID:23658809 RGD:12738215 NCBI chrNW_004936607:3,576,357...3,632,423
Ensembl chrNW_004936607:3,576,392...3,632,554
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:24282625 RGD:9589039 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610
JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:20969567 RGD:7248614 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613
JBrowse link
G E2f1 E2F transcription factor 1 ISO RGD PMID:19088195 RGD:2316261 NCBI chrNW_004936561:6,894,827...6,901,058
Ensembl chrNW_004936561:6,896,063...6,900,026
JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:9551744 RGD:8662285 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772
JBrowse link
G Egln1 egl-9 family hypoxia inducible factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:19,343,770...19,386,087 JBrowse link
G Egln2 egl-9 family hypoxia inducible factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:3,061,391...3,070,219
Ensembl chrNW_004936661:3,061,308...3,070,192
JBrowse link
G Egln3 egl-9 family hypoxia inducible factor 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936494:8,240,272...8,267,487
Ensembl chrNW_004936494:8,238,858...8,267,606
JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21220915 RGD:5131857 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ISO RGD PMID:10100614 RGD:10401146 NCBI chrNW_004936710:1,446,030...1,461,945 JBrowse link
G Eln elastin ISO RGD PMID:16055482 RGD:9585727 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G Endog endonuclease G ISO RGD PMID:17379825 RGD:9685412 NCBI chrNW_004936487:16,282,115...16,285,486
Ensembl chrNW_004936487:16,282,398...16,285,418
JBrowse link
G Eno1 enolase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936623:3,115,357...3,130,289
Ensembl chrNW_004936623:3,115,081...3,128,183
JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:12099714 GO_REF:0000107 GO_REF:0000118 RGD:11041576 NCBI chrNW_004936508:5,855,748...5,938,879
Ensembl chrNW_004936508:5,855,732...5,938,856
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha ISO RGD PMID:12752442 RGD:10401130 NCBI chrNW_004936697:2,154,517...2,199,913
Ensembl chrNW_004936697:2,154,065...2,199,926
JBrowse link
G Fabp1 fatty acid binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:738,361...743,073
Ensembl chrNW_004936712:738,348...743,955
JBrowse link
G Fam162a family with sequence similarity 162 member A involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936536:8,697,631...8,725,667
Ensembl chrNW_004936536:8,697,595...8,730,329
JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:12031707 RGD:8663470 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:31093967 RGD:155882597 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO RGD PMID:11981751 RGD:634296 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041
JBrowse link
G Fmn2 formin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:9,832,790...10,169,488
Ensembl chrNW_004936526:9,833,128...10,169,267
JBrowse link
G Fndc1 fibronectin type III domain containing 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004936489:10,760,209...10,820,377
Ensembl chrNW_004936489:10,736,182...10,819,754
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122
JBrowse link
G Foxo3 forkhead box O3 ISO RGD PMID:24278276 RGD:10402204 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837
JBrowse link
G Fxn frataxin ISO RGD PMID:26071548 RGD:401793712 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G Gad1 glutamate decarboxylase 1 ISO RGD PMID:11259512 RGD:401900595 NCBI chrNW_004936509:1,160,559...1,201,037
Ensembl chrNW_004936509:1,161,094...1,201,576
JBrowse link
G Gad2 glutamate decarboxylase 2 ISO RGD PMID:11259512 RGD:401900595 NCBI chrNW_004936484:1,737,806...1,810,378
Ensembl chrNW_004936484:1,737,520...1,810,398
JBrowse link
G Gata6 GATA binding protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399
JBrowse link
G Gnb1 G protein subunit beta 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004936737:1,518,855...1,554,926
Ensembl chrNW_004936737:1,524,325...1,555,102
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004936803:67,933...71,508
Ensembl chrNW_004936803:67,608...71,541
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24011070) RGD
MGI
TreeGrafter
Ensembl
PMID:18248612 PMID:19220706 PMID:24011070 GO_REF:0000107 GO_REF:0000118 RGD:9068456 RGD:9068884 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha NOT|involved_in ISO
IEA
(PMID:11573933) UniProt
TreeGrafter
PMID:11573933 GO_REF:0000118 NCBI chrNW_004936664:296,288...323,143
Ensembl chrNW_004936664:294,975...323,149
JBrowse link
G Higd1a HIG1 hypoxia inducible domain family member 1A acts_upstream_of_or_within ISO (PMID:25683712)
(PMID:16815968), (PMID:21856340)
MGI PMID:16815968 PMID:21856340 PMID:25683712 NCBI chrNW_004936695:2,330,939...2,341,387
Ensembl chrNW_004936695:2,330,465...2,341,681
JBrowse link
G Hilpda hypoxia inducible lipid droplet associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,582,260...15,583,213
Ensembl chrNW_004936479:15,582,260...15,607,428
JBrowse link
G Hmox1 heme oxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:24177414 RGD:10445837 NCBI chrNW_004936530:2,401,053...2,425,989
Ensembl chrNW_004936530:2,401,043...2,454,466
JBrowse link
G Hp1bp3 heterochromatin protein 1 binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,665,989...6,699,722
Ensembl chrNW_004936474:6,665,507...6,700,152
JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,005,616...4,018,135
Ensembl chrNW_004936542:4,005,610...4,018,135
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20631551 RGD:8662392 NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174
JBrowse link
G Il7 interleukin 7 ISO RGD PMID:19055876 RGD:10402937 NCBI chrNW_004936702:110,625...162,957
Ensembl chrNW_004936702:111,211...162,322
JBrowse link
G Inhba inhibin subunit beta A ISO RGD PMID:30765322 RGD:329849112 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chrNW_004936809:891,407...900,311
Ensembl chrNW_004936809:890,717...900,326
JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO oxygen-glucose deprivation RGD PMID:16135072 PMID:22159112 RGD:12904046 RGD:6893269 NCBI chrNW_004936471:36,547,552...36,601,327
Ensembl chrNW_004936471:36,547,500...36,600,636
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:17285299 RGD:6482794 NCBI chrNW_004936577:3,896,455...4,198,396
Ensembl chrNW_004936577:3,896,390...4,198,411
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 ISO RGD PMID:17285299 RGD:6482794 NCBI chrNW_004936548:646,019...1,120,426
Ensembl chrNW_004936548:645,925...1,121,888
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004936659:1,890,786...1,892,619
Ensembl chrNW_004936659:1,891,080...1,892,123
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in ISO PMID:25352783 UniProt PMID:25352783 RGD:10047379 NCBI chrNW_004936605:4,370,222...4,828,972
Ensembl chrNW_004936605:4,372,671...4,825,423
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chrNW_004936628:3,155,261...3,284,375
Ensembl chrNW_004936628:3,154,109...3,345,660
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 ISO RGD PMID:12215606 RGD:2316539 NCBI chrNW_004936493:5,767,779...5,772,043
Ensembl chrNW_004936493:5,770,103...5,772,326
JBrowse link
G Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 ISO RGD PMID:19461047 RGD:10412041 NCBI chrNW_004936609:4,451,526...4,458,665
Ensembl chrNW_004936609:4,451,492...4,458,712
JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:26439051 RGD:401794572 NCBI chrNW_004936706:940,585...952,484 JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:30887465 RGD:151665136 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163
JBrowse link
G Lcn2 lipocalin 2 ISO oxygen-glucose deprivation RGD PMID:24916903 RGD:126790489 NCBI chrNW_004936487:15,721,752...15,725,396
Ensembl chrNW_004936487:15,721,684...15,728,221
JBrowse link
G Lmna lamin A/C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,374,208...5,395,442
Ensembl chrNW_004936580:5,373,974...5,395,468
JBrowse link
G LOC101956526 cytochrome c oxidase subunit 4 isoform 2, mitochondrial ISO RGD PMID:23303788 RGD:11344908 NCBI chrNW_004936485:18,631,826...18,637,675 JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:21302291 RGD:11040609 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO oxygen-glucose deprivation RGD PMID:32734729 RGD:155804275 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:20810912) UniProt PMID:20810912 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:268,151...299,494
Ensembl chrNW_004936567:268,151...299,494
JBrowse link
G Mfn1 mitofusin 1 ISO oxygen-glucose deprivation RGD PMID:23658809 PMID:27833818 RGD:12738215 RGD:12910766 NCBI chrNW_004936566:3,737,315...3,775,894
Ensembl chrNW_004936566:3,737,315...3,775,693
JBrowse link
G Mfn2 mitofusin 2 ISO oxygen-glucose deprivation RGD PMID:23658809 PMID:28478070 RGD:12738215 RGD:12910733 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556
JBrowse link
G Mgarp mitochondria localized glutamic acid rich protein involved_in ISO (MGI:3850758|PMID:19528298) UniProt PMID:19528298 MGI:3850758 NCBI chrNW_004936535:8,321,443...8,336,773
Ensembl chrNW_004936535:8,320,874...8,336,752
JBrowse link
G Mief1 mitochondrial elongation factor 1 ISO RGD PMID:25911325 RGD:12880381 NCBI chrNW_004936492:2,118,565...2,132,181
Ensembl chrNW_004936492:2,117,790...2,131,220
JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:19462902 RGD:4890975 NCBI chrNW_004936619:1,207,058...1,208,010
Ensembl chrNW_004936619:1,203,746...1,208,442
JBrowse link
G Mpl MPL proto-oncogene, thrombopoietin receptor ISO RGD PMID:15642952 RGD:10449018 NCBI chrNW_004936474:24,744,673...24,757,189
Ensembl chrNW_004936474:24,744,673...24,757,085
JBrowse link
G Mst1 macrophage stimulating 1 ISO RGD PMID:23647599 RGD:10448278 NCBI chrNW_004936529:1,298,853...1,306,088
Ensembl chrNW_004936529:1,299,300...1,303,959
JBrowse link
G Mstn myostatin ISO RGD PMID:30765322 RGD:329849112 NCBI chrNW_004936506:7,988,879...7,996,260
Ensembl chrNW_004936506:7,988,718...7,996,971
JBrowse link
G Mt3 metallothionein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:8,864,512...8,866,516
Ensembl chrNW_004936475:8,864,675...8,866,506
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965
JBrowse link
G Myocd myocardin ISO RGD PMID:20621093 RGD:5132874 NCBI chrNW_004936595:5,256,615...5,356,563
Ensembl chrNW_004936595:5,256,785...5,351,723
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO oxygen-glucose deprivation RGD PMID:28528966 RGD:13781879 NCBI chrNW_004936479:17,682,070...17,716,713
Ensembl chrNW_004936479:17,682,201...17,716,661
JBrowse link
G Ndnf neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:593,848...624,974
Ensembl chrNW_004936662:594,331...624,980
JBrowse link
G Ndp norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30988181) Ensembl
MGI
PMID:30988181 GO_REF:0000107 NCBI chrNW_004936502:10,080,169...10,105,155
Ensembl chrNW_004936502:10,080,145...10,105,328
JBrowse link
G Ndrg1 N-myc downstream regulated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:16,051,291...16,102,563
Ensembl chrNW_004936470:16,051,015...16,102,585
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO
IEA
RGD
Ensembl
PMID:23904790 GO_REF:0000107 RGD:10412703 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262
JBrowse link
G Ngb neuroglobin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:6,094,089...6,098,876
Ensembl chrNW_004936488:6,095,016...6,098,543
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:7,087,677...7,091,334
Ensembl chrNW_004936555:7,088,577...7,091,334
JBrowse link
G Nog noggin ISO RGD PMID:25740156 RGD:12801489 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO PMID:22082675 UniProt PMID:22082675 RGD:10047303 NCBI chrNW_004936475:17,644,299...17,648,213
Ensembl chrNW_004936475:17,644,653...17,648,211
JBrowse link
G Nono non-POU domain containing octamer binding ISO oxygen-glucose deprivation RGD PMID:32424772 RGD:155882459 NCBI chrNW_004936762:322,413...343,126
Ensembl chrNW_004936762:321,280...341,537
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,334,487...1,343,867
Ensembl chrNW_004936664:1,334,510...1,342,321
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Npepps aminopeptidase puromycin sensitive involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,659,729...13,737,510
Ensembl chrNW_004936490:13,659,721...13,737,526
JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:21444791 RGD:11535018 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:27833818 RGD:12910766 NCBI chrNW_004936711:1,027,531...1,113,796
Ensembl chrNW_004936711:1,032,935...1,106,847
JBrowse link
G Oprd1 opioid receptor delta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,860,293...12,902,389
Ensembl chrNW_004936474:12,860,293...12,903,466
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,368,199...5,379,215
Ensembl chrNW_004936594:5,367,816...5,379,252
JBrowse link
G Palld palladin, cytoskeletal associated protein ISO RGD PMID:16481593 RGD:2325785 NCBI chrNW_004936516:786,358...1,151,910
Ensembl chrNW_004936516:802,484...1,151,801
JBrowse link
G Park7 Parkinsonism associated deglycase ISO RGD PMID:29069575 RGD:151347449 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ISO RGD PMID:24177414 RGD:10445837 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:23647599 RGD:10448278 NCBI chrNW_004936489:2,677,740...2,720,387
Ensembl chrNW_004936489:2,677,484...2,722,263
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936547:286,267...310,062
Ensembl chrNW_004936547:286,267...310,062
JBrowse link
G Phb2 prohibitin 2 ISO RGD PMID:25031298 RGD:12903263 NCBI chrNW_004936709:854,493...859,182
Ensembl chrNW_004936709:854,698...858,851
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,574,471...6,589,478
Ensembl chrNW_004936474:6,573,623...6,589,478
JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:19490965 RGD:7241802 NCBI chrNW_004936521:5,238,128...5,243,829
Ensembl chrNW_004936521:5,238,093...5,243,877
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:14699081), (PMID:20810912) UniProt PMID:14699081 PMID:20810912 NCBI chrNW_004936497:4,985,995...4,986,720 JBrowse link
G Ppard peroxisome proliferator activated receptor delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,799,285...23,886,606
Ensembl chrNW_004936476:23,811,641...23,828,176
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22527940 RGD:7242177 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226
JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO oxygen-glucose deprivation RGD PMID:21525936 RGD:10054236 NCBI chrNW_004936664:2,910,609...2,914,205 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:17720864 RGD:2316813 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380
JBrowse link
G Prkce protein kinase C epsilon involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18070622) Ensembl
MGI
PMID:18070622 GO_REF:0000107 NCBI chrNW_004936508:6,018,374...6,495,216
Ensembl chrNW_004936508:6,017,551...6,494,427
JBrowse link
G Prl prolactin involved_in ISO (PMID:24530842) AgBase PMID:24530842 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:24875179) MGI PMID:24875179 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in IEA
ISO
Ensembl
RGD
PMID:19344900 GO_REF:0000107 RGD:401960096 NCBI chrNW_004936514:4,775,884...4,814,574
Ensembl chrNW_004936514:4,791,031...4,812,027
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO (PMID:21296955) UniProt PMID:21296955 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptn pleiotrophin ISO RGD PMID:16226713 PMID:17925408 RGD:10044023 RGD:9834996 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617
JBrowse link
G Ptpn1 protein tyrosine phosphatase non-receptor type 1 ISO RGD PMID:18278556 RGD:401965430 NCBI chrNW_004936514:4,065,455...4,083,847
Ensembl chrNW_004936514:4,068,238...4,084,009
JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D ISO RGD PMID:35848503 RGD:401976433 NCBI chrNW_004936539:2,564,815...3,369,975
Ensembl chrNW_004936539:2,564,793...2,945,293
JBrowse link
G Rgcc regulator of cell cycle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936667:232,807...245,131
Ensembl chrNW_004936667:232,782...245,131
JBrowse link
G Rnf146 ring finger protein 146 ISO RGD PMID:26218637 RGD:13524866 NCBI chrNW_004936639:2,394,566...2,417,452
Ensembl chrNW_004936639:2,393,150...2,417,982
JBrowse link
G Robo1 roundabout guidance receptor 1 ISO oxygen-glucose deprivation RGD PMID:23994690 RGD:243048442 NCBI chrNW_004936505:4,329,428...4,711,310
Ensembl chrNW_004936505:4,330,303...4,709,655
JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643
JBrowse link
G Rtn4 reticulon 4 involved_in ISO (MGI:6274961|PMID:27763637) UniProt PMID:27763637 MGI:6274961 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 involved_in ISO PMID:28029095 UniProt PMID:28029095 RGD:14390052 NCBI chrNW_004936469:13,872,701...14,019,170
Ensembl chrNW_004936469:13,872,701...13,971,005
JBrowse link
G Sdhd succinate dehydrogenase complex subunit D acts_upstream_of_or_within ISO (PMID:15572694) MGI PMID:15572694 NCBI chrNW_004936612:2,357,336...2,369,204 JBrowse link
G Serpine1 serpin family E member 1 ISO RGD PMID:10590062 RGD:8547811 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123
JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Sirt2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000
JBrowse link
G Sirt4 sirtuin 4 ISO RGD PMID:24029877 RGD:9586053 NCBI chrNW_004936668:628,875...633,425
Ensembl chrNW_004936668:626,938...633,466
JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:21325818 RGD:5688411 NCBI chrNW_004936512:8,590,302...8,622,121
Ensembl chrNW_004936512:8,586,262...8,623,597
JBrowse link
G Slc29a1 solute carrier family 29 member 1 (Augustine blood group) ISO RGD PMID:10646513 RGD:1598899 NCBI chrNW_004936476:15,849,054...15,862,486
Ensembl chrNW_004936476:15,846,606...15,862,548
JBrowse link
G Slc2a4 solute carrier family 2 member 4 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004936595:567,267...574,051
Ensembl chrNW_004936595:567,219...574,059
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO RGD PMID:17394575 RGD:1642726 NCBI chrNW_004936508:10,894,918...11,256,084
Ensembl chrNW_004936508:10,968,656...11,253,070
JBrowse link
G Slc8a3 solute carrier family 8 member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:13,236,480...13,370,973
Ensembl chrNW_004936495:13,236,470...13,371,011
JBrowse link
G Slc9a1 solute carrier family 9 member A1 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004936474:11,460,266...11,517,420
Ensembl chrNW_004936474:11,459,929...11,517,478
JBrowse link
G Slit2 slit guidance ligand 2 ISO oxygen-glucose deprivation RGD PMID:26764532 RGD:11573340 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20380727 RGD:2324980 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483
JBrowse link
G Stc1 stanniocalcin 1 ISO RGD PMID:15485913 RGD:2324700 NCBI chrNW_004936555:7,240,649...7,251,668
Ensembl chrNW_004936555:7,239,198...7,251,670
JBrowse link
G Stc2 stanniocalcin 2 ISO RGD PMID:15485913 RGD:2324700 NCBI chrNW_004936609:2,319,546...2,331,049
Ensembl chrNW_004936609:2,319,111...2,332,988
JBrowse link
G Sumo1 small ubiquitin like modifier 1 ISO RGD PMID:17289031 RGD:9587773 NCBI chrNW_004936726:1,402,977...1,413,974
Ensembl chrNW_004936726:1,399,050...1,429,205
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21402781) MGI
Ensembl
PMID:21402781 GO_REF:0000107 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21402781) MGI
Ensembl
PMID:21402781 GO_REF:0000107 NCBI chrNW_004936613:1,443,663...1,467,776
Ensembl chrNW_004936613:1,443,629...1,467,229
JBrowse link
G Tbl2 transducin beta like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,825,990...2,833,908
Ensembl chrNW_004936543:2,824,770...2,833,922
JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO
IEA
RGD
Ensembl
PMID:24376652 GO_REF:0000107 RGD:11038675 NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:4,518,525...4,540,109
Ensembl chrNW_004936606:4,518,584...4,540,114
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:28854428 RGD:152025191 NCBI chrNW_004936492:6,996,627...7,046,137
Ensembl chrNW_004936492:6,996,613...7,046,190
JBrowse link
G Tp53 tumor protein p53 involved_in IEA
ISO
Ensembl
RGD
PMID:17289031 GO_REF:0000107 RGD:9587773 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO PMID:31900229 ARUK-UCL PMID:31900229 RGD:126781734 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940
JBrowse link
G Trpc1 transient receptor potential cation channel subfamily C member 1 ISO RGD PMID:19889962 RGD:7247600 NCBI chrNW_004936540:4,340,672...4,417,655
Ensembl chrNW_004936540:4,323,528...4,418,685
JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 ISO RGD PMID:19889962 RGD:7247600 NCBI chrNW_004936551:6,173,588...6,282,971
Ensembl chrNW_004936551:6,174,122...6,282,925
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936828:543,651...588,673
Ensembl chrNW_004936828:542,407...588,679
JBrowse link
G Ucn2 urocortin 2 ISO RGD PMID:14519439 RGD:2306174 NCBI chrNW_004936529:347,411...348,040 JBrowse link
G Vasn vasorin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21658601) Ensembl
MGI
PMID:21658601 GO_REF:0000107 NCBI chrNW_004936694:128,398...138,954
Ensembl chrNW_004936694:128,273...138,954
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10575000) MGI
Ensembl
PMID:10575000 GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:19233325 RGD:2324641 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502
JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:12,045,679...12,050,737
Ensembl chrNW_004936495:12,045,377...12,051,536
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A ISO RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196
JBrowse link
G Becn1 beclin 1 ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
JBrowse link
G Inhba inhibin subunit beta A ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907
JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:19531214 RGD:401851038 NCBI chrNW_004936588:1,356,769...1,361,037
Ensembl chrNW_004936588:1,356,769...1,361,037
JBrowse link
detection of hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin involved_in ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496
JBrowse link
hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8470821) Ensembl
MGI
PMID:8470821 GO_REF:0000107 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:21302291 RGD:11040609 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904
JBrowse link
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:2,597,593...2,633,780
Ensembl chrNW_004936509:2,597,452...2,633,780
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:141,745...213,495
Ensembl chrNW_004936624:142,402...213,528
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of
IEA
ISO
(PMID:25186293) Ensembl
MGI
PMID:25186293 GO_REF:0000107 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
intrinsic apoptotic signaling pathway in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20935145) Ensembl
MGI
PMID:20935145 GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daxx death domain associated protein ISO cell death RGD PMID:17289031 RGD:9587773 NCBI chrNW_004936476:25,546,091...25,550,390
Ensembl chrNW_004936476:25,546,036...25,550,392
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:262,653...397,753
Ensembl chrNW_004936608:262,445...397,762
JBrowse link
G Drd1 dopamine receptor D1 ISO cell death RGD PMID:27638511 RGD:13506952 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613
JBrowse link
G Drd2 dopamine receptor D2 ISO cell death RGD PMID:27638511 RGD:13506952 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798
JBrowse link
G Epha4 EPH receptor A4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:31150684) ARUK-UCL
Ensembl
PMID:31150684 GO_REF:0000107 NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO cell death RGD PMID:24048861 RGD:10412727 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO cell death RGD PMID:18539296 RGD:9590185 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874
JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,115,357...3,130,289
Ensembl chrNW_004936623:3,115,081...3,128,183
JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936542:4,005,616...4,018,135
Ensembl chrNW_004936542:4,005,610...4,018,135
JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:30887465 RGD:151665136 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO PMID:10590251 UniProt PMID:10590251 RGD:10047155 NCBI chrNW_004936475:17,644,299...17,648,213
Ensembl chrNW_004936475:17,644,653...17,648,211
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:907,118...1,041,814
Ensembl chrNW_004936540:907,112...1,041,848
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,574,471...6,589,478
Ensembl chrNW_004936474:6,573,623...6,589,478
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:7,427,926...7,448,700
Ensembl chrNW_004936512:7,427,729...7,449,078
JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO (PMID:17371845) MGI PMID:17371845 NCBI chrNW_004936491:7,247,160...7,421,039
Ensembl chrNW_004936491:7,247,140...7,420,921
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25186293) Ensembl
MGI
PMID:25186293 GO_REF:0000107 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3a DNA methyltransferase 3 alpha ISO oxygen-glucose deprivation-induced cell death RGD PMID:23516428 RGD:9589049 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610
JBrowse link
G Ep300 E1A binding protein p300 ISO reduced metabolism in hypoxia-treated PC12 cells
reduced metabolism in hypoxia mimic CoCl2-treated PC12 cells
RGD PMID:18586071 PMID:19103185 RGD:2311713 RGD:2311718 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chrNW_004936628:3,155,261...3,284,375
Ensembl chrNW_004936628:3,154,109...3,345,660
JBrowse link
positive regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rwdd3 RWD domain containing 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22009797) Ensembl
MGI
TreeGrafter
InterPro
PMID:22009797 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936537:4,019,337...4,031,951
Ensembl chrNW_004936537:4,017,661...4,031,981
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:26,026,878...26,032,098
Ensembl chrNW_004936474:26,026,842...26,032,218
JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:1,331,568...1,341,854
Ensembl chrNW_004936722:1,331,566...1,341,863
JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,860,432...7,864,050
Ensembl chrNW_004936543:7,860,448...7,863,983
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:18054269 RGD:9068899 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chrNW_004936532:7,142,580...7,284,722
Ensembl chrNW_004936532:7,145,882...7,286,244
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:19450559 RGD:7242910 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:814,649...826,008
Ensembl chrNW_004936529:813,951...826,014
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:10205047) DisProt PMID:10205047 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 ISO RGD PMID:18929865 RGD:2314608 NCBI chrNW_004936560:42,561...45,748
Ensembl chrNW_004936560:42,537...45,807
JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:18655887 RGD:2304092 NCBI chrNW_004936602:4,241,743...4,259,866
Ensembl chrNW_004936602:4,241,737...4,260,549
JBrowse link
response to hypobaric hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam15 ADAM metallopeptidase domain 15 ISO RGD PMID:22230263 RGD:13703065 NCBI chrNW_004936580:4,588,182...4,598,659
Ensembl chrNW_004936580:4,588,039...4,599,014
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO RGD PMID:22230263 RGD:13703065 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:22523357 RGD:155226858 NCBI chrNW_004936631:3,721,307...3,785,346
Ensembl chrNW_004936631:3,721,313...3,780,892
JBrowse link
G Dnm1l dynamin 1 like ISO RGD PMID:24637344 RGD:12738213 NCBI chrNW_004936607:3,576,357...3,632,423
Ensembl chrNW_004936607:3,576,392...3,632,554
JBrowse link
G Fis1 fission, mitochondrial 1 ISO RGD PMID:24361501 RGD:12738138 NCBI chrNW_004936543:1,112,746...1,116,521
Ensembl chrNW_004936543:1,112,742...1,116,518
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:24590457 RGD:10402551 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337
JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:27925282 RGD:12902631 NCBI chrNW_004936471:36,547,552...36,601,327
Ensembl chrNW_004936471:36,547,500...36,600,636
JBrowse link
G Mfn1 mitofusin 1 ISO RGD PMID:24637344 RGD:12738213 NCBI chrNW_004936566:3,737,315...3,775,894
Ensembl chrNW_004936566:3,737,315...3,775,693
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:24637344 RGD:12738213 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22523357 RGD:155226858 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226
JBrowse link
response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:10727784 RGD:1598521 NCBI chrNW_004936530:7,543,743...7,621,392
Ensembl chrNW_004936530:7,543,682...7,622,667
JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:19323616 RGD:4890033 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427
JBrowse link
G Abcc9 ATP binding cassette subfamily C member 9 acts_upstream_of_or_within ISO (PMID:20935152)
(PMID:20123112)
MGI PMID:20123112 PMID:20935152 NCBI chrNW_004936548:4,983,461...5,110,693
Ensembl chrNW_004936548:4,987,847...5,108,104
JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004936647:3,153,586...3,208,935
Ensembl chrNW_004936647:3,153,485...3,213,582
JBrowse link
G Actn4 actinin alpha 4 ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004936801:1,333,077...1,402,885
Ensembl chrNW_004936801:1,333,077...1,404,054
JBrowse link
G Acvrl1 activin A receptor like type 1 ISO RGD PMID:17515860 RGD:2303144 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Ada adenosine deaminase involved_in ISO (PMID:16670267) RGD
UniProt
PMID:16670267 PMID:20735412 RGD:5128862 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:16785610 RGD:1599143 NCBI chrNW_004936578:3,168,599...3,179,369
Ensembl chrNW_004936578:3,168,331...3,171,928
JBrowse link
G Adm adrenomedullin ISO RGD PMID:17251392 RGD:1625295 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643
JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:16690710 RGD:5129101 NCBI chrNW_004936567:1,430,128...1,508,626
Ensembl chrNW_004936567:1,429,817...1,462,532
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:21562317 RGD:7175065 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210
JBrowse link
G Adsl adenylosuccinate lyase ISO RGD PMID:8887278 RGD:1598763 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Ager advanced glycosylation end-product specific receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18323529) Ensembl
MGI
PMID:18323529 GO_REF:0000107 NCBI chrNW_004936727:1,418,342...1,422,005
Ensembl chrNW_004936727:1,418,799...1,422,147
JBrowse link
G Ago2 argonaute RISC catalytic component 2 ISO RGD PMID:21969601 RGD:401900683 NCBI chrNW_004936470:10,641,109...10,690,587
Ensembl chrNW_004936470:10,628,128...10,680,106
JBrowse link
G Agtrap angiotensin II receptor associated protein ISO RGD PMID:17033689 RGD:1625355 NCBI chrNW_004936474:585,440...597,493
Ensembl chrNW_004936474:585,440...597,257
JBrowse link
G Ahcy adenosylhomocysteinase ISO RGD PMID:10646513 RGD:1598899 NCBI chrNW_004936561:6,314,797...6,333,961
Ensembl chrNW_004936561:6,314,705...6,334,439
JBrowse link
G Ajuba ajuba LIM protein involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936722:1,331,568...1,341,854
Ensembl chrNW_004936722:1,331,566...1,341,863
JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO RGD PMID:29676955 RGD:13703029 NCBI chrNW_004936661:2,652,568...2,694,039
Ensembl chrNW_004936661:2,652,566...2,694,086
JBrowse link
G Alad aminolevulinate dehydratase ISO RGD PMID:3697363 RGD:4144802 NCBI chrNW_004936559:226,481...237,258
Ensembl chrNW_004936559:226,424...241,684
JBrowse link
G Alas1 5'-aminolevulinate synthase 1 ISO RGD PMID:9849899 RGD:2306420 NCBI chrNW_004936529:3,518,337...3,531,842
Ensembl chrNW_004936529:3,518,322...3,531,845
JBrowse link
G Alas2 5'-aminolevulinate synthase 2 involved_in ISO
IEA
RGD
Ensembl
PMID:17095594 GO_REF:0000107 RGD:1599040 NCBI chrNW_004936751:1,818,255...1,841,028
Ensembl chrNW_004936751:1,814,446...1,841,531
JBrowse link
G Aldh3a1 aldehyde dehydrogenase 3 family member A1 ISO RGD PMID:11306047 RGD:2300314 NCBI chrNW_004936881:71,047...77,543
Ensembl chrNW_004936881:70,951...77,839
JBrowse link
G Aldoc aldolase, fructose-bisphosphate C ISO RGD PMID:17053973 RGD:2301133 NCBI chrNW_004936538:4,798,991...4,802,700
Ensembl chrNW_004936538:4,798,989...4,802,994
JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:1,729,707...1,756,108
Ensembl chrNW_004936741:1,729,679...1,757,419
JBrowse link
G Ang angiogenin involved_in ISO (PMID:10999833), (PMID:15979542), (PMID:16490744) UniProt PMID:10999833 PMID:15979542 PMID:16490744 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G Angpt1 angiopoietin 1 ISO RGD PMID:11129953 RGD:1626169 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190
JBrowse link
G Angpt2 angiopoietin 2 ISO hypoxic retina RGD PMID:17943991 RGD:2314202 NCBI chrNW_004936615:4,472,261...4,524,537
Ensembl chrNW_004936615:4,472,247...4,524,556
JBrowse link
G Angptl4 angiopoietin like 4 ISO RGD PMID:17033689 RGD:1625355 NCBI chrNW_004936588:5,188,866...5,194,924
Ensembl chrNW_004936588:5,188,850...5,194,931
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO RGD PMID:18325779 RGD:2325740 NCBI chrNW_004936492:14,818,561...14,902,231
Ensembl chrNW_004936492:14,816,623...14,902,132
JBrowse link
G Apold1 apolipoprotein L domain containing 1 ISO RGD PMID:15102925 RGD:1303988 NCBI chrNW_004936587:4,512,440...4,517,183
Ensembl chrNW_004936587:4,512,368...4,517,309
JBrowse link
G Arg2 arginase 2 ISO RGD PMID:20039818 RGD:4143278 NCBI chrNW_004936495:11,004,296...11,045,467
Ensembl chrNW_004936495:11,004,176...11,045,472
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8702901) RGD
MGI
Ensembl
PMID:8702901 PMID:10873592 GO_REF:0000107 RGD:2301216 NCBI chrNW_004936580:1,038,420...1,093,319
Ensembl chrNW_004936580:1,036,973...1,082,984
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO
IEA
RGD
Ensembl
PMID:10873592 GO_REF:0000107 RGD:2301216 NCBI chrNW_004936483:20,041,712...20,218,853
Ensembl chrNW_004936483:20,041,657...20,218,965
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:567,462...569,195
Ensembl chrNW_004936794:568,567...569,139
JBrowse link
G Atm ATM serine/threonine kinase ISO RGD PMID:16651613 RGD:1599365 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ISO RGD PMID:12573531 RGD:631759 NCBI chrNW_004936481:17,438,146...17,460,329
Ensembl chrNW_004936481:17,436,270...17,460,348
JBrowse link
G Bad BCL2 associated agonist of cell death ISO RGD PMID:16005992 RGD:2292692 NCBI chrNW_004936599:4,924,349...4,933,683
Ensembl chrNW_004936599:4,924,789...4,933,368
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO RGD PMID:24089674 RGD:155882465 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:16445580 PMID:24089674 RGD:155882465 RGD:1599476 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Bcl2l1 BCL2 like 1 ISO RGD PMID:17272823 RGD:1643524 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Bdnf brain derived neurotrophic factor ISO RGD PMID:14699417 RGD:4891114 NCBI chrNW_004936540:5,530,081...5,582,765
Ensembl chrNW_004936540:5,529,942...5,585,014
JBrowse link
G Becn1 beclin 1 ISO RGD PMID:22449108 RGD:6483050 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
JBrowse link
G Birc2 baculoviral IAP repeat containing 2 ISO RGD PMID:12023884 RGD:631960 NCBI chrNW_004936551:5,515,904...5,535,864 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20042692) Ensembl
MGI
PMID:20042692 GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO PMID:14972662 UniProt PMID:14972662 RGD:2314028 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927
JBrowse link
G Ca9 carbonic anhydrase 9 ISO RGD PMID:18071747 RGD:2293203 NCBI chrNW_004936524:3,672,393...3,678,630
Ensembl chrNW_004936524:3,672,541...3,678,433
JBrowse link
G Camk2d calcium/calmodulin dependent protein kinase II delta ISO RGD PMID:11925434 RGD:724615 NCBI chrNW_004936563:4,226,412...4,526,139
Ensembl chrNW_004936563:4,227,986...4,526,118
JBrowse link
G Camk2g calcium/calmodulin dependent protein kinase II gamma ISO RGD PMID:11925434 RGD:724615 NCBI chrNW_004936521:5,276,629...5,325,907
Ensembl chrNW_004936521:5,276,749...5,333,611
JBrowse link
G Capn2 calpain 2 ISO RGD PMID:15979593 RGD:1578397 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682
JBrowse link
G Casp3 caspase 3 ISO RGD PMID:18466900 PMID:24089674 RGD:155882465 RGD:2293315 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp9 caspase 9 ISO RGD PMID:24089674 RGD:155882465 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G Cat catalase ISO RGD PMID:18270324 RGD:5130774 NCBI chrNW_004936533:3,601,270...3,637,128
Ensembl chrNW_004936533:3,600,955...3,637,422
JBrowse link
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16601228) Ensembl
MGI
PMID:16601228 GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
JBrowse link
G Cav3 caveolin 3 ISO RGD PMID:29438664 RGD:126925221 NCBI chrNW_004936602:4,264,896...4,278,160
Ensembl chrNW_004936602:4,264,889...4,278,161
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:857,483...875,527
Ensembl chrNW_004936641:810,074...875,534
JBrowse link
G Cd38 CD38 molecule ISO RGD PMID:12111041 RGD:2307243 NCBI chrNW_004936477:12,109,761...12,156,037
Ensembl chrNW_004936477:12,108,742...12,156,248
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO RGD PMID:15799773 RGD:2293627 NCBI chrNW_004936587:4,573,166...4,578,480
Ensembl chrNW_004936587:4,572,728...4,578,461
JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:23926673 RGD:11341700 NCBI chrNW_004936726:381,888...425,565
Ensembl chrNW_004936726:381,835...423,311
JBrowse link
G Chat choline O-acetyltransferase ISO RGD PMID:17218023 RGD:1600836 NCBI chrNW_004936728:653,654...702,433
Ensembl chrNW_004936728:654,638...700,213
JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:10,680,893...10,695,859
Ensembl chrNW_004936514:10,680,859...10,695,865
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in ISO (PMID:12189247) UniProt PMID:12189247 NCBI chrNW_004937351:32,324...46,871
Ensembl chrNW_004937351:34,921...47,246
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15450117) Ensembl
MGI
PMID:15450117 GO_REF:0000107 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443
JBrowse link
G Ciao3 cytosolic iron-sulfur assembly component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:277,525...286,929
Ensembl chrNW_004936501:277,518...286,932
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Cldn3 claudin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,952,054...2,953,313
Ensembl chrNW_004936543:2,951,086...2,953,956
JBrowse link
G Comt catechol-O-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20075204) Ensembl
MGI
PMID:20075204 GO_REF:0000107 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004936599:1,491,934...1,535,101
Ensembl chrNW_004936599:1,482,172...1,535,119
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:24084215 RGD:10059409 NCBI chrNW_004936631:3,721,307...3,785,346
Ensembl chrNW_004936631:3,721,313...3,780,892
JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 ISO RGD PMID:16099461 RGD:1626240 NCBI chrNW_004936541:2,288,847...2,333,129
Ensembl chrNW_004936541:2,288,841...2,331,689
JBrowse link
G Crp C-reactive protein ISO RGD PMID:21158023 RGD:5131294 NCBI chrNW_004936740:885,855...888,854
Ensembl chrNW_004936740:883,272...890,606
JBrowse link
G Cryaa crystallin alpha A acts_upstream_of_or_within ISO (PMID:18191123) MGI PMID:18191123 NCBI chrNW_004936500:931,804...935,185
Ensembl chrNW_004936500:931,754...935,296
JBrowse link
G Cryab crystallin alpha B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18191123) Ensembl
MGI
PMID:18191123 GO_REF:0000107 NCBI chrNW_004936612:2,532,851...2,536,473
Ensembl chrNW_004936612:2,532,812...2,537,495
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:32522286 PMID:33101590 RGD:151665765 RGD:151665766 NCBI chrNW_004936504:4,898,947...4,927,195
Ensembl chrNW_004936504:4,898,945...4,928,923
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 ISO RGD PMID:18630689 RGD:4891889 NCBI chrNW_004936475:9,443,851...9,454,715
Ensembl chrNW_004936475:9,443,733...9,455,062
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO RGD PMID:17581219 RGD:2306578 NCBI chrNW_004936617:4,224,131...4,239,080
Ensembl chrNW_004936617:4,224,131...4,238,796
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:39,794,613...39,798,448
Ensembl chrNW_004936469:39,794,584...39,798,459
JBrowse link
G Cygb cytoglobin ISO RGD PMID:14660570 RGD:9685175 NCBI chrNW_004936594:1,602,436...1,613,783
Ensembl chrNW_004936594:1,604,710...1,613,783
JBrowse link
G Ddit4 DNA damage inducible transcript 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18198340) RGD
MGI
TreeGrafter
Ensembl
PMID:11884613 PMID:18198340 GO_REF:0000107 GO_REF:0000118 RGD:633979 NCBI chrNW_004936521:6,646,864...6,648,982
Ensembl chrNW_004936521:6,646,797...6,648,983
JBrowse link
G Dio3 iodothyronine deiodinase 3 ISO RGD PMID:18259611 RGD:2303417 NCBI chrNW_004936604:5,241,877...5,243,910 JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:23529784 RGD:9588317 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Dpp4 dipeptidyl peptidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:16,979,220...17,062,198
Ensembl chrNW_004936469:16,979,410...17,061,159
JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:15681393 RGD:1581407 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798
JBrowse link
G Dspp dentin sialophosphoprotein ISO RGD PMID:24661255 RGD:12911017 NCBI chrNW_004936905:458,062...463,359
Ensembl chrNW_004936905:458,298...463,346
JBrowse link
G Ece1 endothelin converting enzyme 1 ISO RGD PMID:11813889 RGD:728806 NCBI chrNW_004936474:7,034,134...7,083,005
Ensembl chrNW_004936474:7,034,134...7,083,005
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8764295) RGD
MGI
Ensembl
PMID:8764295 PMID:12060564 GO_REF:0000107 MGI:892631 RGD:625753 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772
JBrowse link
G Ednra endothelin receptor type A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9449664) Ensembl
MGI
PMID:9449664 GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910
JBrowse link
G Egln1 egl-9 family hypoxia inducible factor 1 involved_in ISO (PMID:16956324) RGD
HGNC-UCL
PMID:12876291 PMID:16956324 RGD:727754 NCBI chrNW_004936484:19,343,770...19,386,087 JBrowse link
G Egln2 egl-9 family hypoxia inducible factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,061,391...3,070,219
Ensembl chrNW_004936661:3,061,308...3,070,192
JBrowse link
G Egln3 egl-9 family hypoxia inducible factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:8,240,272...8,267,487
Ensembl chrNW_004936494:8,238,858...8,267,606
JBrowse link
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Eng endoglin involved_in ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO
IEA
RGD
Ensembl
PMID:16000154 PMID:19103185 GO_REF:0000107 RGD:2289914 RGD:2311713 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Epas1 endothelial PAS domain protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25414188)
(PMID:15626745)
(PMID:11782478)
RGD
MGI
UniProt
Ensembl
PMID:11782478 PMID:12675925 PMID:15626745 PMID:25414188 GO_REF:0000107 GO_REF:0000117 RGD:632652 NCBI chrNW_004936508:5,855,748...5,938,879
Ensembl chrNW_004936508:5,855,732...5,938,856
JBrowse link
G Epo erythropoietin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15016652) RGD
MGI
Ensembl
PMID:15016652 PMID:19497871 GO_REF:0000107 RGD:2313639 NCBI chrNW_004936543:742,722...745,332
Ensembl chrNW_004936543:743,537...745,343
JBrowse link
G Epor erythropoietin receptor ISO RGD PMID:21624288 RGD:11041655 NCBI chrNW_004936659:1,468,391...1,473,880
Ensembl chrNW_004936659:1,468,634...1,473,880
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO RGD PMID:9763211 RGD:2302855 NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO RGD PMID:9763211 RGD:2302855 NCBI chrNW_004936469:43,970,002...43,998,279
Ensembl chrNW_004936469:43,969,740...43,998,448
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:15579511 RGD:2313701 NCBI chrNW_004936572:3,728,971...3,795,612
Ensembl chrNW_004936572:3,730,327...3,795,625
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:9155722 RGD:11041574 NCBI chrNW_004936472:505,751...515,375
Ensembl chrNW_004936472:505,751...514,339
JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:16870148 RGD:1600332 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:18772315) RGD
MGI
PMID:12062723 PMID:18772315 PMID:20026766 RGD:10402123 RGD:1582498 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18548006) RGD
MGI
Ensembl
PMID:15892448 PMID:18548006 GO_REF:0000107 RGD:2293775 NCBI chrNW_004936493:4,308,683...4,327,102
Ensembl chrNW_004936493:4,304,395...4,327,179
JBrowse link
G Fundc1 FUN14 domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22267086) MGI
Ensembl
PMID:22267086 GO_REF:0000107 NCBI chrNW_004936502:10,643,172...10,657,118
Ensembl chrNW_004936502:10,643,071...10,657,134
JBrowse link
G Fzd4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25414188) Ensembl
MGI
PMID:25414188 GO_REF:0000107 NCBI chrNW_004936498:14,657,641...14,666,853
Ensembl chrNW_004936498:14,662,659...14,666,883
JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:21180161 RGD:5687743 NCBI chrNW_004936561:3,946,256...3,954,472
Ensembl chrNW_004936561:3,950,340...3,952,405
JBrowse link
G Gpr182 G protein-coupled receptor 182 ISO RGD PMID:12622928 RGD:1625768 NCBI chrNW_004936646:1,210,711...1,212,746
Ensembl chrNW_004936646:1,210,757...1,212,425
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:18927268 RGD:401950493 NCBI chrNW_004936669:814,330...838,881
Ensembl chrNW_004936669:814,330...839,208
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:17270176 RGD:13432036 NCBI chrNW_004936587:3,406,055...3,806,956
Ensembl chrNW_004936587:3,405,698...3,804,664
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(PMID:10074486), (PMID:11792862)
(PMID:17437992)
(PMID:19273585)
(PMID:11801735), (PMID:8702901)
(PMID:9606183)
(PMID:11782478)
RGD
MGI
UniProt
Ensembl
PMID:8702901 PMID:9606183 PMID:10074486 PMID:11782478 PMID:11792862 More... GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 RGD:628389 RGD:632652 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9840812) Ensembl
MGI
PMID:9840812 GO_REF:0000107 NCBI chrNW_004936664:296,288...323,143
Ensembl chrNW_004936664:294,975...323,149
JBrowse link
G Hk1 hexokinase 1 ISO RGD PMID:29676955 RGD:13703029 NCBI chrNW_004936521:9,067,062...9,139,112
Ensembl chrNW_004936521:9,066,999...9,159,793
JBrowse link
G Hk2 hexokinase 2 ISO RGD PMID:29676955 RGD:13703029 NCBI chrNW_004936556:1,054,143...1,113,425
Ensembl chrNW_004936556:1,054,021...1,113,450
JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:3697363 RGD:4144802 NCBI chrNW_004936542:4,037,888...4,046,089
Ensembl chrNW_004936542:4,037,201...4,050,810
JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:12114196 PMID:14970910 RGD:1582715 RGD:625603 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G Hmox2 heme oxygenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:4,556,617...4,558,250
Ensembl chrNW_004936530:4,556,706...4,557,663
JBrowse link
G Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 ISO RGD PMID:19470702 RGD:2308928 NCBI chrNW_004936475:17,882,663...17,888,708
Ensembl chrNW_004936475:17,882,575...17,887,748
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,513,908...10,528,281
Ensembl chrNW_004936492:10,513,908...10,528,285
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 ISO RGD PMID:17439344 RGD:1624228 NCBI chrNW_004936506:1,678,069...1,687,632 JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO RGD PMID:17437047 RGD:1624260 NCBI chrNW_004936474:7,407,622...7,478,950
Ensembl chrNW_004936474:7,408,518...7,467,851
JBrowse link
G Hyou1 hypoxia up-regulated 1 ISO RGD PMID:8617779 RGD:633350 NCBI chrNW_004936542:4,005,616...4,018,135
Ensembl chrNW_004936542:4,005,610...4,018,135
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:19823174 RGD:4145499 NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174
JBrowse link
G Igf1 insulin like growth factor 1 ISO RGD PMID:19766709 RGD:10046049 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351
JBrowse link
G Igfbp3 insulin like growth factor binding protein 3 ISO RGD PMID:22805023 RGD:12743618 NCBI chrNW_004936478:20,511,490...20,518,251
Ensembl chrNW_004936478:20,510,137...20,518,306
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:12122053 RGD:628353 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189
JBrowse link
G Il1a interleukin 1 alpha ISO RGD PMID:15197744 RGD:4143218 NCBI chrNW_004936783:1,210,715...1,218,315
Ensembl chrNW_004936783:1,210,809...1,218,315
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:19342292 RGD:4142845 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165
JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO (PMID:17437992) MGI PMID:17437992 NCBI chrNW_004936647:3,102,922...3,104,758 JBrowse link
G Insr insulin receptor ISO chronic intermittent hypoxia RGD PMID:25352008 RGD:14700927 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668
JBrowse link
G Itga2 integrin subunit alpha 2 ISO RGD PMID:16284587 RGD:1582307 NCBI chrNW_004936480:14,320,292...14,417,828
Ensembl chrNW_004936480:14,320,692...14,417,786
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:3,896,455...4,198,396
Ensembl chrNW_004936577:3,896,390...4,198,411
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936548:646,019...1,120,426
Ensembl chrNW_004936548:645,925...1,121,888
JBrowse link
G Jag2 jagged canonical Notch ligand 2 ISO RGD PMID:18344904 RGD:2302246 NCBI chrNW_004936621:363,489...380,616
Ensembl chrNW_004936621:366,616...380,618
JBrowse link
G Kcnj11 potassium inwardly rectifying channel subfamily J member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17445233) Ensembl
MGI
PMID:17445233 GO_REF:0000107 NCBI chrNW_004936528:1,685,015...1,688,220
Ensembl chrNW_004936528:1,685,924...1,687,096
JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28893911), (PMID:29666184) Ensembl
MGI
PMID:28893911 PMID:29666184 GO_REF:0000107 NCBI chrNW_004936548:5,125,583...5,132,490
Ensembl chrNW_004936548:5,125,555...5,133,078
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16306267) RGD
MGI
Ensembl
PMID:15528406 PMID:16306267 GO_REF:0000107 RGD:1581584 NCBI chrNW_004936521:2,000,113...2,706,010
Ensembl chrNW_004936521:2,000,109...2,705,365
JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:28679649 RGD:329955564 NCBI chrNW_004936706:940,585...952,484 JBrowse link
G Kdm3a lysine demethylase 3A ISO RGD PMID:18538129 RGD:9586363 NCBI chrNW_004936712:1,053,210...1,097,845
Ensembl chrNW_004936712:1,053,210...1,096,961
JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:33075501 RGD:151665134 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163
JBrowse link
G Kdr kinase insert domain receptor ISO RGD PMID:15780476 RGD:2292011 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Lct lactase ISO RGD PMID:12773704 RGD:1600260 NCBI chrNW_004936469:40,064,822...40,108,423
Ensembl chrNW_004936469:40,064,822...40,107,447
JBrowse link
G Ldha lactate dehydrogenase A ISO RGD PMID:12678657 RGD:1600275 NCBI chrNW_004936528:866,607...879,977 JBrowse link
G Ldlr low density lipoprotein receptor ISO RGD PMID:18703410 RGD:5490256 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294
JBrowse link
G Lep leptin ISO RGD PMID:15284063 RGD:5129123 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334
JBrowse link
G Lepr leptin receptor ISO RGD PMID:15284063 RGD:5129123 NCBI chrNW_004936591:5,771,371...5,846,177
Ensembl chrNW_004936591:5,774,326...5,836,444
JBrowse link
G Lif LIF interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18548006) Ensembl
MGI
PMID:18548006 GO_REF:0000107 NCBI chrNW_004936904:410,043...413,256
Ensembl chrNW_004936904:410,043...413,257
JBrowse link
G Limd1 LIM domain containing 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936695:260,586...314,521
Ensembl chrNW_004936695:259,209...314,535
JBrowse link
G Lipc lipase C, hepatic type ISO RGD PMID:15271879 RGD:2307444 NCBI chrNW_004936471:19,604,083...19,733,721
Ensembl chrNW_004936471:19,703,236...19,733,686
JBrowse link
G LOC101954516 signal transducer and activator of transcription 5B ISO RGD PMID:16730240 RGD:1601380 NCBI chrNW_004936490:17,022,268...17,043,751
Ensembl chrNW_004936490:17,021,051...17,043,941
JBrowse link
G LOC101954543 caspase-1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,230,060...3,240,496 JBrowse link
G LOC101967032 cytochrome b-245 light chain ISO RGD PMID:22372715 RGD:11040694 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991
JBrowse link
G LOC101968601 signal transducer CD24 involved_in ISO (PMID:15174142) UniProt PMID:15174142 NCBI chrNW_004936491:16,706,745...16,707,010 JBrowse link
G LOC101968921 angiotensin-converting enzyme ISO RGD PMID:14527966 RGD:1358270 NCBI chrNW_004936541:4,157,847...4,178,156
Ensembl chrNW_004936541:4,157,393...4,178,177
JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO RGD PMID:11589108 RGD:2306678 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332
JBrowse link
G LOC101970551 inhibitor of carbonic anhydrase ISO RGD PMID:16479386 RGD:1601542 NCBI chrNW_004936529:6,856,042...6,895,989 JBrowse link
G LOC101976500 haptoglobin ISO RGD PMID:3094379 RGD:1626356 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G Lonp1 lon peptidase 1, mitochondrial involved_in ISO
IEA
RGD
Ensembl
PMID:12082077 GO_REF:0000107 RGD:633879 NCBI chrNW_004936588:3,265,344...3,287,035
Ensembl chrNW_004936588:3,265,512...3,287,181
JBrowse link
G Loxl2 lysyl oxidase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,781,563...6,865,662
Ensembl chrNW_004936555:6,781,321...6,865,768
JBrowse link
G Lta lymphotoxin alpha ISO RGD PMID:15197744 RGD:4143218 NCBI chrNW_004936727:1,940,081...1,941,022
Ensembl chrNW_004936727:1,940,081...1,941,022
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO RGD PMID:22388934 RGD:155791648 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765
JBrowse link
G Mb myoglobin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14656764) Ensembl
MGI
PMID:14656764 GO_REF:0000107 NCBI chrNW_004936492:4,890,871...4,897,665
Ensembl chrNW_004936492:4,890,871...4,897,665
JBrowse link
G Mecp2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17997046) Ensembl
MGI
PMID:17997046 GO_REF:0000107 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839
JBrowse link
G Mlh1 mutL homolog 1 ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO RGD PMID:27807143 RGD:12910498 NCBI chrNW_004936551:5,107,567...5,117,843
Ensembl chrNW_004936551:5,106,285...5,117,843
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:16965566 RGD:1582552 NCBI chrNW_004936551:5,040,084...5,050,384
Ensembl chrNW_004936551:5,040,084...5,050,384
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO RGD PMID:16980344 RGD:1582594 NCBI chrNW_004936722:1,447,189...1,457,632
Ensembl chrNW_004936722:1,447,335...1,457,611
JBrowse link
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17382917) RGD
MGI
TreeGrafter
Ensembl
PMID:16980344 PMID:17382917 GO_REF:0000107 GO_REF:0000118 RGD:1582594 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:17289933 RGD:1642045 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793
JBrowse link
G Mt3 metallothionein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:8,864,512...8,866,516
Ensembl chrNW_004936475:8,864,675...8,866,506
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:15845641 RGD:1359026 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193
JBrowse link
G Muc1 mucin 1, cell surface associated ISO RGD PMID:19549898 RGD:2317979 NCBI chrNW_004936580:4,691,870...4,694,092 JBrowse link
G Myb MYB proto-oncogene, transcription factor ISO RGD PMID:10074303 RGD:11532745 NCBI chrNW_004936560:2,797,943...2,828,813
Ensembl chrNW_004936560:2,796,697...2,829,650
JBrowse link
G Myocd myocardin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:5,256,615...5,356,563
Ensembl chrNW_004936595:5,256,785...5,351,723
JBrowse link
G Ndp norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25414188) Ensembl
MGI
PMID:25414188 GO_REF:0000107 NCBI chrNW_004936502:10,080,169...10,105,155
Ensembl chrNW_004936502:10,080,145...10,105,328
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16288202) Ensembl
MGI
PMID:16288202 GO_REF:0000107 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:17403661) MGI PMID:17403661 NCBI chrNW_004936475:18,462,424...18,557,832
Ensembl chrNW_004936475:18,462,298...18,555,220
JBrowse link
G Ngb neuroglobin involved_in ISO
IEA
RGD
TreeGrafter
PMID:16750520 GO_REF:0000118 RGD:9743951 NCBI chrNW_004936488:6,094,089...6,098,876
Ensembl chrNW_004936488:6,095,016...6,098,543
JBrowse link
G Nol3 nucleolar protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18782777) RGD
MGI
Ensembl
PMID:12753927 PMID:18782777 GO_REF:0000107 RGD:1299527 NCBI chrNW_004936475:17,644,299...17,648,213
Ensembl chrNW_004936475:17,644,653...17,648,211
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:17442632 GO_REF:0000107 RGD:1642143 NCBI chrNW_004936558:5,162,471...5,302,488
Ensembl chrNW_004936558:5,233,459...5,301,414
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12960352) Ensembl
MGI
PMID:12960352 GO_REF:0000107 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051
JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:17947499 RGD:2292122 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534
JBrowse link
G Nox4 NADPH oxidase 4 ISO RGD PMID:20185631 RGD:2324656 NCBI chrNW_004936736:230,465...394,859
Ensembl chrNW_004936736:230,476...396,708
JBrowse link
G Nppa natriuretic peptide A ISO RGD PMID:2136863 RGD:7247720 NCBI chrNW_004936474:671,362...673,610 JBrowse link
G Nppb natriuretic peptide B ISO RGD PMID:17822384 RGD:1642261 NCBI chrNW_004936474:683,325...684,662
Ensembl chrNW_004936474:683,325...684,665
JBrowse link
G Nppc natriuretic peptide C ISO RGD PMID:16677483 RGD:1642268 NCBI chrNW_004936525:5,092,675...5,099,344
Ensembl chrNW_004936525:5,092,635...5,099,331
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14742729) Ensembl
MGI
PMID:14742729 GO_REF:0000107 NCBI chrNW_004936469:21,912,118...21,920,486
Ensembl chrNW_004936469:21,912,047...21,920,486
JBrowse link
G Nrf1 nuclear respiratory factor 1 ISO RGD PMID:18078825 PMID:33310031 RGD:2302401 RGD:329955450 NCBI chrNW_004936579:5,424,049...5,560,355
Ensembl chrNW_004936579:5,423,773...5,561,003
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14672995) Ensembl
MGI
PMID:14672995 GO_REF:0000107 NCBI chrNW_004936660:2,570,627...2,574,081
Ensembl chrNW_004936660:2,570,625...2,573,296
JBrowse link
G P2rx3 purinergic receptor P2X 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14672995) Ensembl
MGI
PMID:14672995 GO_REF:0000107 NCBI chrNW_004936581:5,116,276...5,146,378
Ensembl chrNW_004936581:5,115,492...5,146,634
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO RGD PMID:9367856 RGD:2299857 NCBI chrNW_004936498:6,001,126...6,135,663
Ensembl chrNW_004936498:6,001,014...6,086,614
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:18818385 RGD:6483514 NCBI chrNW_004936523:1,492,795...1,786,942
Ensembl chrNW_004936523:1,493,450...1,750,524
JBrowse link
G Pde5a phosphodiesterase 5A ISO RGD PMID:12466227 RGD:1582528 NCBI chrNW_004936869:24,265...117,120
Ensembl chrNW_004936869:39,122...117,127
JBrowse link
G Pdgfa platelet derived growth factor subunit A ISO RGD PMID:8447423 RGD:1580847 NCBI chrNW_004936754:808,894...828,554
Ensembl chrNW_004936754:808,213...828,613
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO RGD PMID:8447423 RGD:1580847 NCBI chrNW_004936492:2,353,840...2,368,573
Ensembl chrNW_004936492:2,353,841...2,368,573
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:23315792 RGD:9999167 NCBI chrNW_004936471:6,809,181...6,834,189
Ensembl chrNW_004936471:6,809,195...6,836,169
JBrowse link
G Pdlim1 PDZ and LIM domain 1 ISO RGD PMID:8522188 RGD:68225 NCBI chrNW_004936636:4,083,413...4,126,728
Ensembl chrNW_004936636:4,083,071...4,126,739
JBrowse link
G Penk proenkephalin ISO RGD PMID:22200548 RGD:10003120 NCBI chrNW_004936496:3,016,247...3,021,726
Ensembl chrNW_004936496:3,016,218...3,021,738
JBrowse link
G Pgf placental growth factor involved_in ISO
IEA
RGD
TreeGrafter
PMID:17240241 GO_REF:0000118 RGD:1642388 NCBI chrNW_004936488:4,098,187...4,111,108
Ensembl chrNW_004936488:4,098,225...4,111,142
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:309,530...321,294
Ensembl chrNW_004936659:309,506...321,334
JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:11356723 RGD:68728 NCBI chrNW_004936580:4,770,977...4,799,316
Ensembl chrNW_004936580:4,767,109...4,779,916
JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:3696161 RGD:2303142 NCBI chrNW_004936471:31,589,322...31,617,891
Ensembl chrNW_004936471:31,589,324...31,617,873
JBrowse link
G Plat plasminogen activator, tissue type involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17382917) Ensembl
MGI
PMID:17382917 GO_REF:0000107 NCBI chrNW_004936785:476,200...503,371
Ensembl chrNW_004936785:476,078...503,321
JBrowse link
G Plau plasminogen activator, urokinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17382917) Ensembl
MGI
PMID:17382917 GO_REF:0000107 NCBI chrNW_004936521:5,238,128...5,243,829
Ensembl chrNW_004936521:5,238,093...5,243,877
JBrowse link
G Pld2 phospholipase D2 ISO RGD PMID:11095536 RGD:2299918 NCBI chrNW_004936677:2,870,664...2,883,545
Ensembl chrNW_004936677:2,870,660...2,883,567
JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in ISO (PMID:29531808) UniProt PMID:29531808 NCBI chrNW_004936737:2,072,857...2,079,855 JBrowse link
G Plod1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:14622280 GO_REF:0000107 RGD:1303932 NCBI chrNW_004936474:740,582...763,294
Ensembl chrNW_004936474:746,922...765,585
JBrowse link
G Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 involved_in ISO
IEA
RGD
Ensembl
PMID:14622280 GO_REF:0000107 RGD:1303932 NCBI chrNW_004936519:9,053,192...9,139,221
Ensembl chrNW_004936519:9,053,033...9,140,059
JBrowse link
G Pml PML nuclear body scaffold involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16915281) Ensembl
MGI
PMID:16915281 GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
G Pnmt phenylethanolamine N-methyltransferase ISO RGD PMID:21046459 RGD:5129698 NCBI chrNW_004936490:14,858,682...14,861,614
Ensembl chrNW_004936490:14,858,603...14,865,321
JBrowse link
G Postn periostin ISO RGD PMID:15121739 RGD:10041030 NCBI chrNW_004936472:31,644,778...31,677,572
Ensembl chrNW_004936472:31,644,778...31,677,572
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO PMID:15292030 HGNC-UCL
RGD
PMID:15292030 PMID:33310031 RGD:2315862 RGD:329955450 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:20875806 PMID:33310031 RGD:329955450 RGD:6484529 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936478:19,669,727...19,673,355 JBrowse link
G Prkcd protein kinase C delta ISO RGD PMID:16936002 RGD:1642548 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515
JBrowse link
G Prkcq protein kinase C theta ISO RGD PMID:15994856 RGD:1625608 NCBI chrNW_004936484:8,048,239...8,166,058
Ensembl chrNW_004936484:8,048,132...8,167,636
JBrowse link
G Prmt2 protein arginine methyltransferase 2 involved_in ISO (MGI:3762283|PMID:16690984) BHF-UCL PMID:16690984 MGI:3762283 NCBI chrNW_004936778:12,988...31,217
Ensembl chrNW_004936778:12,967...29,077
JBrowse link
G Psen2 presenilin 2 ISO RGD PMID:12468103 RGD:1304261 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074
JBrowse link
G Ptgis prostaglandin I2 synthase ISO RGD PMID:12062720 PMID:16094316 RGD:401959327 RGD:8693629 NCBI chrNW_004936514:4,775,884...4,814,574
Ensembl chrNW_004936514:4,791,031...4,812,027
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO RGD PMID:11781137 RGD:1642636 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810
JBrowse link
G Pygm glycogen phosphorylase, muscle associated ISO RGD PMID:14674711 RGD:1599986 NCBI chrNW_004936599:4,551,164...4,564,109
Ensembl chrNW_004936599:4,551,032...4,564,154
JBrowse link
G Rad21 RAD21 cohesin complex component ISO RGD PMID:33741460 RGD:243065262 NCBI chrNW_004936470:29,377,793...29,403,422
Ensembl chrNW_004936470:29,377,734...29,407,312
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase ISO RGD PMID:8603510 RGD:1580670 NCBI chrNW_004936602:1,089,979...1,114,376
Ensembl chrNW_004936602:1,051,205...1,117,096
JBrowse link
G Ramp2 receptor activity modifying protein 2 ISO RGD PMID:17251392 RGD:1625295 NCBI chrNW_004936490:17,479,899...17,481,788
Ensembl chrNW_004936490:17,479,650...17,482,716
JBrowse link
G Reg1a regenerating family member 1 alpha ISO intermittent hypoxia RGD PMID:24055447 RGD:9850134 NCBI chrNW_004936556:4,873,331...4,875,608
Ensembl chrNW_004936556:4,873,331...4,875,608
JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:27531581) UniProt PMID:27531581 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:16205723 RGD:1642821 NCBI chrNW_004936529:1,000,050...1,045,655
Ensembl chrNW_004936529:999,935...1,045,681
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in IEA
ISO
Ensembl
RGD
PMID:24692174 GO_REF:0000107 RGD:329813077 NCBI chrNW_004936801:1,185,615...1,298,416
Ensembl chrNW_004936801:1,185,733...1,298,289
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in IEA
ISO
Ensembl
RGD
PMID:22962011 GO_REF:0000107 RGD:329813078 NCBI chrNW_004936484:15,402,488...15,825,410
Ensembl chrNW_004936484:15,403,819...15,824,441
JBrowse link
G Ryr3 ryanodine receptor 3 ISO RGD PMID:24692174 RGD:329813077 NCBI chrNW_004936673:2,078,095...2,434,872
Ensembl chrNW_004936673:1,932,755...2,434,066
JBrowse link
G Scap SREBF chaperone involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17666524) Ensembl
MGI
PMID:17666524 GO_REF:0000107 NCBI chrNW_004936596:1,124,573...1,180,219
Ensembl chrNW_004936596:1,122,042...1,180,297
JBrowse link
G Scfd1 sec1 family domain containing 1 ISO RGD PMID:9195952 RGD:633771 NCBI chrNW_004936494:5,410,219...5,501,687
Ensembl chrNW_004936494:5,410,269...5,501,498
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta ISO RGD PMID:12372821 RGD:729765 NCBI chrNW_004936501:8,021,090...8,065,245
Ensembl chrNW_004936501:8,020,316...8,065,332
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma ISO RGD PMID:12372821 RGD:729765 NCBI chrNW_004936501:7,932,729...7,958,146
Ensembl chrNW_004936501:7,932,703...7,958,204
JBrowse link
G Sdc2 syndecan 2 ISO RGD PMID:18803305 RGD:2311708 NCBI chrNW_004936470:45,967,816...46,074,820
Ensembl chrNW_004936470:45,967,303...46,074,812
JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:14756961 RGD:4143406 NCBI chrNW_004936712:1,614,979...1,621,207
Ensembl chrNW_004936712:1,614,979...1,622,466
JBrowse link
G Shc1 SHC adaptor protein 1 ISO RGD PMID:16439820 RGD:1643183 NCBI chrNW_004936580:4,511,560...4,522,003
Ensembl chrNW_004936580:4,512,680...4,519,715
JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:18228117 RGD:2306299 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Slc11a2 solute carrier family 11 member 2 involved_in ISO
IEA
RGD
TreeGrafter
PMID:21325818 GO_REF:0000118 RGD:5688411 NCBI chrNW_004936512:8,590,302...8,622,121
Ensembl chrNW_004936512:8,586,262...8,623,597
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO RGD PMID:29676955 RGD:13703029 NCBI chrNW_004936474:24,205,878...24,236,611
Ensembl chrNW_004936474:24,206,644...24,236,713
JBrowse link
G Slc2a8 solute carrier family 2 member 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11689004) Ensembl
MGI
PMID:11689004 GO_REF:0000107 NCBI chrNW_004936487:15,154,712...15,164,615
Ensembl chrNW_004936487:15,154,641...15,165,870
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:11259539 RGD:4889445 NCBI chrNW_004936538:6,205,268...6,239,062
Ensembl chrNW_004936538:6,205,251...6,239,083
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO RGD PMID:17267548 RGD:1642729 NCBI chrNW_004936508:10,894,918...11,256,084
Ensembl chrNW_004936508:10,968,656...11,253,070
JBrowse link
G Smad3 SMAD family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Smad9 SMAD family member 9 ISO RGD PMID:17515860 RGD:2303144 NCBI chrNW_004936472:30,980,850...31,050,138
Ensembl chrNW_004936472:30,980,928...31,049,618
JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:16125475 RGD:1625685 NCBI chrNW_004936594:2,932,297...2,935,358
Ensembl chrNW_004936594:2,933,747...2,934,451
JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:16911942 RGD:1625690 NCBI chrNW_004936489:11,178,338...11,191,601
Ensembl chrNW_004936489:11,178,015...11,191,781
JBrowse link
G Srf serum response factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
G Tacc3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (PMID:11025203) MGI PMID:11025203 NCBI chrNW_004936477:21,648,958...21,665,855
Ensembl chrNW_004936477:21,648,716...21,665,625
JBrowse link
G Tek TEK receptor tyrosine kinase ISO RGD PMID:11504684 RGD:628494 NCBI chrNW_004936611:2,420,176...2,531,726
Ensembl chrNW_004936611:2,420,172...2,531,722
JBrowse link
G Tfam transcription factor A, mitochondrial ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004936614:4,595,973...4,605,040
Ensembl chrNW_004936614:4,596,617...4,605,104
JBrowse link
G Tfrc transferrin receptor ISO RGD PMID:17091493 RGD:2292034 NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:17213961 RGD:1601553 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO
IEA
ISS
RGD
Ensembl
AgBase
PMID:14697406 GO_REF:0000024 GO_REF:0000107 RGD:1625703 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 ISO RGD PMID:18760335 RGD:2302018 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO RGD PMID:18760335 RGD:2302018 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO RGD PMID:12183510 RGD:727411 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
G Th tyrosine hydroxylase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:12692140 PMID:21075155 GO_REF:0000107 GO_REF:0000118 RGD:1580029 RGD:5128812 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061
JBrowse link
G Tlr2 toll like receptor 2 ISO RGD PMID:15535030 RGD:2312731 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788
JBrowse link
G Tlr4 toll like receptor 4 ISO RGD PMID:15535030 RGD:2312731 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095
JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:19,029,181...19,079,468
Ensembl chrNW_004936485:19,029,073...19,080,830
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:15197744 RGD:4143218 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO RGD PMID:21404274 RGD:5130888 NCBI chrNW_004936709:1,407,327...1,421,448
Ensembl chrNW_004936709:1,407,278...1,421,921
JBrowse link
G Trh thyrotropin releasing hormone ISO RGD PMID:15726019 RGD:1600425 NCBI chrNW_004936602:623,542...626,337
Ensembl chrNW_004936602:623,535...626,445
JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 ISO RGD PMID:22962011 RGD:329813078 NCBI chrNW_004936769:1,424,526...1,447,547
Ensembl chrNW_004936769:1,424,549...1,447,516
JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO (PMID:18198340) MGI PMID:18198340 NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363
JBrowse link
G Txn2 thioredoxin 2 ISO RGD PMID:15468176 RGD:2306164 NCBI chrNW_004936492:4,310,394...4,320,714
Ensembl chrNW_004936492:4,311,287...4,321,763
JBrowse link
G Ubd ubiquitin D ISO RGD PMID:29438664 RGD:126925221 NCBI chrNW_004936723:1,218,621...1,221,070
Ensembl chrNW_004936723:1,218,258...1,221,451
JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO RGD PMID:16483544 RGD:2308869 NCBI chrNW_004936647:891,357...913,963
Ensembl chrNW_004936647:891,996...911,033
JBrowse link
G Ucp2 uncoupling protein 2 involved_in ISO
IEA
RGD
Ensembl
PMID:17704287 GO_REF:0000107 RGD:2302404 NCBI chrNW_004936498:3,059,700...3,066,112
Ensembl chrNW_004936498:3,059,297...3,066,197
JBrowse link
G Ucp3 uncoupling protein 3 involved_in ISO PMID:15292030 RGD
HGNC-UCL
PMID:15292030 PMID:19082433 RGD:2313529 RGD:2315862 NCBI chrNW_004936498:3,082,575...3,095,739
Ensembl chrNW_004936498:3,082,575...3,095,737
JBrowse link
G Usf1 upstream transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936903:352,569...359,350
Ensembl chrNW_004936903:352,590...359,398
JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:16677483 RGD:1642268 NCBI chrNW_004936623:2,339,259...2,345,717
Ensembl chrNW_004936623:2,340,778...2,345,700
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:19465514 RGD:2312873 NCBI chrNW_004936748:785,491...802,791
Ensembl chrNW_004936748:785,455...803,048
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:12881220 GO_REF:0000107 GO_REF:0000118 RGD:1580563 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936599:4,963,161...4,966,258
Ensembl chrNW_004936599:4,962,222...4,966,264
JBrowse link
G Vegfc vascular endothelial growth factor C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936516:7,217,543...7,332,531
Ensembl chrNW_004936516:7,217,543...7,332,559
JBrowse link
G Vegfd vascular endothelial growth factor D involved_in ISO
IEA
RGD
TreeGrafter
PMID:17289933 GO_REF:0000118 RGD:1642045 NCBI chrNW_004936470:4,761,827...4,794,751
Ensembl chrNW_004936470:4,762,332...4,793,938
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:11912140 RGD:619592 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502
JBrowse link
G Wdr83 WD repeat domain 83 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25550320) Ensembl
MGI
PMID:25550320 GO_REF:0000107 NCBI chrNW_004936659:1,796,030...1,803,714
Ensembl chrNW_004936659:1,796,067...1,803,683
JBrowse link
G Wtip WT1 interacting protein involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936570:1,469,181...1,494,574
Ensembl chrNW_004936570:1,470,368...1,494,580
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO RGD PMID:9763211 RGD:2302855 NCBI chrNW_004936706:752,571...783,746
Ensembl chrNW_004936706:751,108...783,777
JBrowse link
G Znf354a zinc finger protein 354A ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004936647:16,233...18,411
Ensembl chrNW_004936647:15,966...17,935
JBrowse link
response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip1 BCL2 interacting protein 1 ISO RGD PMID:22639046 RGD:14398458 NCBI chrNW_004936609:2,433,162...2,444,258
Ensembl chrNW_004936609:2,430,484...2,444,361
JBrowse link
G Bnip2 BCL2 interacting protein 2 ISO RGD PMID:22639046 RGD:14398458 NCBI chrNW_004936471:20,655,415...20,675,351
Ensembl chrNW_004936471:20,652,601...20,675,325
JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO RGD PMID:22639046 RGD:14398458 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927
JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:10997722 RGD:152176656 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051
JBrowse link
G Nppc natriuretic peptide C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:5,092,675...5,099,344
Ensembl chrNW_004936525:5,092,635...5,099,331
JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 ISO RGD PMID:19422384 RGD:13514045 NCBI chrNW_004936877:554,969...564,905
Ensembl chrNW_004936877:554,473...564,903
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO RGD PMID:34321385 RGD:155882552 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34321385 RGD:155882552 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    response to stimulus 8553
      response to abiotic stimulus 1450
        response to oxygen levels 526
          response to decreased oxygen levels 480
            cellular response to decreased oxygen levels + 227
            response to anoxia + 6
            response to hypoxia + 460
            response to oxygen-glucose deprivation + 14
paths to the root