Plat (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PLAT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 42,174,718 - 42,207,565 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 42,174,718 - 42,207,709 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 42,032,236 - 42,065,083 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 42,151,393 - 42,184,351 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 42,151,911 - 42,184,351 | NCBI | | | | | Celera | 8 | 40,981,190 - 41,014,147 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | p11.21 | NCBI | | | | | HuRef | 8 | 40,559,713 - 40,592,984 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 42,080,535 - 42,113,811 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 42,449,037 - 42,481,874 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Plat (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 23,247,655 - 23,272,864 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 23,247,743 - 23,272,860 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 22,757,722 - 22,782,848 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 22,757,727 - 22,782,844 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 23,868,216 - 23,893,320 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 24,223,313 - 24,248,389 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 24,247,228 - 24,272,480 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | A2 | NCBI | | | | | cM Map | 8 | 11.42 | NCBI | | | | |
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Plat (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 16 | 75,943,061 - 76,022,037 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 69,240,582 - 69,265,177 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 69,240,585 - 69,268,223 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 74,514,320 - 74,538,910 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 77,946,850 - 77,971,428 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 73,195,994 - 73,220,572 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 74,098,263 - 74,122,897 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 74,098,260 - 74,122,889 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 73,730,256 - 73,754,851 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 73,711,323 - 73,736,328 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 16 | 73,711,587 - 73,736,593 (-) | NCBI | | | | | Celera | 16 | 67,134,451 - 67,159,047 (-) | NCBI | | Celera | | | RH 3.4 Map | 16 | 644.8 | RGD | | | | | Cytogenetic Map | 16 | q12.5 | NCBI | | | | |
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Plat (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955536 | 730,981 - 756,394 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955536 | 730,962 - 754,333 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PLAT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 60,627,599 - 61,135,005 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 36,344,912 - 36,377,468 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 41,419,415 - 41,451,951 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 38,864,918 - 38,897,776 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 38,864,918 - 38,897,779 (-) | Ensembl | panpan1.1 | | panPan2 | |
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PLAT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 16 | 23,469,590 - 23,496,013 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 16 | 23,974,129 - 24,000,506 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 16 | 25,217,768 - 25,244,182 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 16 | 23,588,653 - 23,615,286 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 16 | 24,152,407 - 24,178,867 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 16 | 24,203,090 - 24,229,785 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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PLAT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 11,195,602 - 11,224,032 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 11,195,599 - 11,223,821 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 13,168,730 - 13,197,126 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PLAT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 8 | 40,164,391 - 40,196,627 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 40,163,891 - 40,196,555 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666052 | 1,590,000 - 1,622,258 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Plat (Heterocephalus glaber - naked mole-rat) |
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