Tek (TEK receptor tyrosine kinase) - Rat Genome Database

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Gene: Tek (TEK receptor tyrosine kinase) Ictidomys tridecemlineatus
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Symbol: Tek
Name: TEK receptor tyrosine kinase
RGD ID: 12629872
Description: ENCODES a protein that exhibits growth factor binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN angiopoietin signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); acute myeloid leukemia (ortholog); angiosarcoma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: angiopoietin-1 receptor; TEK receptor tyrosine kinase, transcript variant X1; TEK receptor tyrosine kinase, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947160,136,641 - 160,248,238 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366112,420,172 - 2,531,722 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366112,420,176 - 2,531,726 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (IEA,ISO)
cell differentiation  (IEA)
cell surface receptor protein tyrosine kinase signaling pathway  (IEA)
cell-cell adhesion  (ISO)
cell-matrix adhesion  (ISO)
circulatory system development  (IEA)
endochondral ossification  (ISO)
endothelial cell proliferation  (IEA)
glomerulus vasculature development  (ISO)
heart development  (ISO)
heart trabecula formation  (ISO)
hemopoiesis  (ISO)
negative regulation of angiogenesis  (IEA)
negative regulation of apoptotic process  (ISO)
negative regulation of endothelial cell apoptotic process  (ISO)
positive regulation of angiogenesis  (IEA,ISO)
positive regulation of cell adhesion  (ISO)
positive regulation of cytokine production involved in immune response  (ISO)
positive regulation of endothelial cell migration  (IEA)
positive regulation of ERK1 and ERK2 cascade  (IEA,ISO)
positive regulation of focal adhesion assembly  (IEA)
positive regulation of intracellular signal transduction  (IEA)
positive regulation of MAPK cascade  (IEA)
positive regulation of peptidyl-serine phosphorylation  (ISO)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IEA,ISO)
positive regulation of protein import into nucleus  (ISO)
positive regulation of protein phosphorylation  (IEA,ISO)
positive regulation of Rac protein signal transduction  (IEA)
positive regulation of Rho protein signal transduction  (IEA)
regulation of angiogenesis  (ISO)
regulation of cell migration  (ISO)
regulation of establishment or maintenance of cell polarity  (IEA)
regulation of non-canonical NF-kappaB signal transduction  (ISO)
response to cAMP  (ISO)
response to estrogen  (ISO)
response to hypoxia  (ISO)
response to organic substance  (ISO)
response to peptide hormone  (ISO)
response to retinoic acid  (ISO)
sprouting angiogenesis  (IEA)
substrate adhesion-dependent cell spreading  (IEA)
Tie signaling pathway  (IEA)
vasculogenesis  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Tek
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947160,136,641 - 160,248,238 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366112,420,172 - 2,531,722 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366112,420,176 - 2,531,726 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TEK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38927,109,141 - 27,230,178 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl927,109,141 - 27,230,174 (+)EnsemblGRCh38hg38GRCh38
GRCh37927,109,139 - 27,230,176 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36927,099,286 - 27,220,172 (+)NCBINCBI36Build 36hg18NCBI36
Build 34927,099,440 - 27,220,164NCBI
Celera927,037,320 - 27,158,328 (+)NCBICelera
Cytogenetic Map9p21.2NCBI
HuRef927,061,676 - 27,182,725 (+)NCBIHuRef
CHM1_1927,108,925 - 27,229,954 (+)NCBICHM1_1
T2T-CHM13v2.0927,119,713 - 27,240,739 (+)NCBIT2T-CHM13v2.0
Tek
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39494,627,322 - 94,763,213 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl494,627,526 - 94,763,213 (+)EnsemblGRCm39 Ensembl
GRCm38494,739,086 - 94,874,976 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl494,739,289 - 94,874,976 (+)EnsemblGRCm38mm10GRCm38
MGSCv37494,405,991 - 94,541,630 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36494,231,318 - 94,366,957 (+)NCBIMGSCv36mm8
Celera493,148,719 - 93,271,150 (+)NCBICelera
Cytogenetic Map4C5NCBI
cM Map443.34NCBI
Tek
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85114,722,815 - 114,849,535 (+)NCBIGRCr8
mRatBN7.25109,607,077 - 109,733,805 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5109,607,077 - 109,733,804 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5112,185,658 - 112,306,395 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05113,911,456 - 114,031,907 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05113,973,696 - 114,094,435 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05113,725,717 - 113,852,799 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5113,725,717 - 113,852,799 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05117,672,484 - 117,799,345 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45115,047,195 - 115,196,172 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15115,171,316 - 115,174,864 (+)NCBI
Celera5108,234,353 - 108,354,536 (+)NCBICelera
Cytogenetic Map5q33NCBI
Tek
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554727,633,721 - 7,748,386 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554727,633,790 - 7,748,130 (-)NCBIChiLan1.0ChiLan1.0
TEK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21197,313,642 - 97,436,178 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1997,319,581 - 97,442,141 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0926,955,339 - 27,077,809 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1927,561,421 - 27,683,572 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl927,561,421 - 27,683,572 (+)Ensemblpanpan1.1panPan2
TEK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11145,278,375 - 45,377,300 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1145,278,891 - 45,409,093 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1143,955,919 - 44,054,831 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01146,225,355 - 46,324,241 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1146,225,693 - 46,324,239 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11144,881,654 - 44,980,440 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01144,771,574 - 44,870,410 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01145,518,478 - 45,616,970 (+)NCBIUU_Cfam_GSD_1.0
TEK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1195,937,432 - 196,051,980 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11195,938,177 - 196,052,294 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21218,224,152 - 218,293,514 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Tek
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473631,345,774 - 31,473,727 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000010664   ⟹   ENSSTOP00000009574
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366112,421,109 - 2,531,215 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000031584   ⟹   ENSSTOP00000030617
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366112,420,172 - 2,531,722 (-)Ensembl
RefSeq Acc Id: XM_005334184   ⟹   XP_005334241
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404947160,136,641 - 160,248,238 (+)NCBI
SpeTri2.0NW_0049366112,420,176 - 2,531,726 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005334185   ⟹   XP_005334242
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404947160,136,641 - 160,248,238 (+)NCBI
SpeTri2.0NW_0049366112,420,176 - 2,531,726 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005334241 (Get FASTA)   NCBI Sequence Viewer  
  XP_005334242 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000009574.3
  ENSSTOP00000030617.1
GenBank Protein KAG3287349 (Get FASTA)   NCBI Sequence Viewer  
  KAG3287350 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005334241   ⟸   XM_005334184
- Peptide Label: isoform X1
- UniProtKB: I3MFX6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005334242   ⟸   XM_005334185
- Peptide Label: isoform X2
- UniProtKB: A0A287DAL9 (UniProtKB/TrEMBL),   I3MFX6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000009574   ⟸   ENSSTOT00000010664
RefSeq Acc Id: ENSSTOP00000030617   ⟸   ENSSTOT00000031584

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000010659 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000010664.3 UniProtKB/TrEMBL
  ENSSTOT00000031584.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
  Tie2 ligand-binding domain superfamily UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro EGF-like_dom UniProtKB/TrEMBL
  FN3_dom UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  LE_dom UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/TrEMBL
  Tyr_kin_Tie2_Ig-like_dom-1_N UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/TrEMBL
  Tyr_kinase_cat_dom UniProtKB/TrEMBL
NCBI Gene Tek ENTREZGENE
PANTHER ANGIOPOIETIN-1 RECEPTOR UniProtKB/TrEMBL
  TYROSINE-PROTEIN KINASE RECEPTOR UniProtKB/TrEMBL
Pfam fn3 UniProtKB/TrEMBL
  Ig_Tie2_1 UniProtKB/TrEMBL
  PK_Tyr_Ser-Thr UniProtKB/TrEMBL
PIRSF TyrPK_CSF1-R UniProtKB/TrEMBL
PRINTS TYRKINASE UniProtKB/TrEMBL
PROSITE EGF_1 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
  FN3 UniProtKB/TrEMBL
  IG_LIKE UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_TYR UniProtKB/TrEMBL
SMART EGF UniProtKB/TrEMBL
  FN3 UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
  TyrKc UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
  SSF49265 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt A0A287DAL9 ENTREZGENE, UniProtKB/TrEMBL
  I3MFX6 ENTREZGENE, UniProtKB/TrEMBL