Acaa2 (acetyl-CoA acyltransferase 2) - Rat Genome Database

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Gene: Acaa2 (acetyl-CoA acyltransferase 2) Ictidomys tridecemlineatus
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Symbol: Acaa2
Name: acetyl-CoA acyltransferase 2
RGD ID: 12625631
Description: ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); acetyl-CoA C-acyltransferase activity (ortholog); acyl-CoA hydrolase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to hypoxia (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); osteoarthritis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: 3-ketoacyl-CoA thiolase, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494438,003,267 - 38,029,972 (+)NCBI
SpeTri2.0NW_00493649713,242,644 - 13,269,007 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Acaa2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494438,003,267 - 38,029,972 (+)NCBI
SpeTri2.0NW_00493649713,242,644 - 13,269,007 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACAA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1849,782,164 - 49,813,953 (-)EnsemblGRCh38hg38GRCh38
GRCh381849,782,164 - 49,813,533 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371847,308,534 - 47,339,903 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361845,563,873 - 45,593,900 (-)NCBINCBI36hg18NCBI36
Build 341845,563,872 - 45,593,900NCBI
Celera1844,166,539 - 44,196,918 (-)NCBI
Cytogenetic Map18q21.1NCBI
HuRef1844,164,298 - 44,194,528 (-)NCBIHuRef
CHM1_11847,305,498 - 47,335,866 (-)NCBICHM1_1
Acaa2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391874,912,283 - 74,939,278 (+)NCBIGRCm39mm39
GRCm39 Ensembl1874,912,268 - 74,939,279 (+)Ensembl
GRCm381874,779,212 - 74,806,207 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1874,779,197 - 74,806,208 (+)EnsemblGRCm38mm10GRCm38
MGSCv371874,938,866 - 74,965,861 (+)NCBIGRCm37mm9NCBIm37
MGSCv361874,904,577 - 74,931,572 (+)NCBImm8
Celera1876,003,491 - 76,030,308 (+)NCBICelera
Cytogenetic Map18E2NCBI
cM Map1850.76NCBI
Acaa2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21868,345,136 - 68,373,246 (+)NCBI
Rnor_6.0 Ensembl1870,733,872 - 70,762,395 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01870,733,872 - 70,762,395 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01869,873,084 - 69,901,836 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41871,587,259 - 71,632,610 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11871,660,459 - 71,705,811 (+)NCBI
Celera1866,521,595 - 66,549,734 (+)NCBICelera
Cytogenetic Map18q12.2NCBI
Acaa2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540234,857,317 - 34,885,169 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540234,857,317 - 34,885,169 (-)NCBIChiLan1.0ChiLan1.0
ACAA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11846,512,374 - 46,542,737 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1846,512,374 - 46,542,737 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01843,164,504 - 43,195,038 (-)NCBIMhudiblu_PPA_v0panPan3
ACAA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1779,028,636 - 79,057,720 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha778,425,399 - 78,464,609 (+)NCBI
ROS_Cfam_1.0779,086,363 - 79,125,478 (+)NCBI
UMICH_Zoey_3.1778,802,328 - 78,841,679 (+)NCBI
UNSW_CanFamBas_1.0778,830,801 - 78,869,895 (+)NCBI
UU_Cfam_GSD_1.0779,116,676 - 79,155,898 (+)NCBI
ACAA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl199,280,800 - 99,332,381 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1199,284,467 - 99,310,759 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21108,842,950 - 108,869,736 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACAA2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11831,152,067 - 31,181,020 (+)NCBI
ChlSab1.1 Ensembl1831,152,074 - 31,181,706 (+)Ensembl
Acaa2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477813,307,236 - 13,336,347 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005323072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005323072   ⟹   XP_005323129
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494438,003,267 - 38,029,972 (+)NCBI
SpeTri2.0NW_00493649713,242,644 - 13,269,007 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005323129 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005323129   ⟸   XM_005323072
- UniProtKB: I3N5Y9 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000020792 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000019785 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000026550 UniProtKB/TrEMBL
Gene3D-CATH 3.40.47.10 UniProtKB/TrEMBL
InterPro Thiolase UniProtKB/TrEMBL
  Thiolase-like UniProtKB/TrEMBL
  Thiolase_acyl_enz_int_AS UniProtKB/TrEMBL
  Thiolase_C UniProtKB/TrEMBL
  Thiolase_CS UniProtKB/TrEMBL
  Thiolase_N UniProtKB/TrEMBL
NCBI Gene Acaa2 ENTREZGENE
Pfam Thiolase_C UniProtKB/TrEMBL
  Thiolase_N UniProtKB/TrEMBL
PIRSF Ac-CoA_Ac_transf UniProtKB/TrEMBL
PROSITE THIOLASE_1 UniProtKB/TrEMBL
  THIOLASE_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53901 UniProtKB/TrEMBL
TIGRFAMs AcCoA-C-Actrans UniProtKB/TrEMBL
UniProt I3N5Y9 ENTREZGENE, UniProtKB/TrEMBL