Tgfb2 (transforming growth factor beta 2)

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Gene: Tgfb2 (transforming growth factor beta 2) Ictidomys tridecemlineatus

Analyze

Symbol:

Tgfb2

Name:

transforming growth factor beta 2

RGD ID:

12597901

Description:

ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); ascending aorta morphogenesis (ortholog); atrial septum morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); aortic aneurysm (ortholog); aortic disease (ortholog); FOUND IN axon (ortholog); basement membrane (ortholog); cell surface (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transforming growth factor beta 2, transcript variant X1; transforming growth factor beta 2, transcript variant X2; transforming growth factor beta 2, transcript variant X3; transforming growth factor beta-2; transforming growth factor beta-2 proprotein

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	58,300,141 - 58,383,975 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936628	308,691 - 394,007 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936628	310,720 - 394,002 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aberrant Crypt Foci (ISO)

aortic aneurysm (ISO)

aortic disease (ISO)

aortic valve insufficiency (ISO)

atrial heart septal defect 1 (ISO)

autoimmune disease (ISO)

bone development disease (ISO)

cholangitis (ISO)

cleft palate (ISO)

colon carcinoma (ISO)

colorectal cancer (ISO)

Colorectal Neoplasms (ISO)

congenital heart disease (ISO)

Congenital Limb Deformities (ISO)

connective tissue disease (ISO)

Craniofacial Abnormalities (ISO)

Cyanosis (ISO)

diabetic neuropathy (ISO)

Ehlers-Danlos syndrome (ISO)

endometriosis (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

Experimental Diabetes Mellitus (ISO)

Eye Abnormalities (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

glaucoma (ISO)

hepatocellular carcinoma (ISO)

Hirschsprung Disease 1 (ISO)

Hirschsprung's disease (ISO)

Holt-Oram syndrome (ISO)

liver cirrhosis (ISO)

Loeys-Dietz syndrome (ISO)

Loeys-Dietz syndrome 4 (ISO)

lung adenocarcinoma (ISO)

malignant mesothelioma (ISO)

Martsolf Syndrome (ISO)

Musculoskeletal Abnormalities (ISO)

myocardial infarction (ISO)

osteochondrodysplasia (ISO)

pancreatic adenosquamous carcinoma (ISO)

pancreatic ductal adenocarcinoma (ISO)

parathyroid carcinoma (ISO)

Respiratory System Abnormalities (ISO)

Spinal Cord Injuries (ISO)

thoracic aortic aneurysm (ISO)

ureteral obstruction (ISO)

Urogenital Abnormalities (ISO)

Usher syndrome (ISO)

Wallerian Degeneration (ISO)

Wounds and Injuries (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation-induced cell death of T cells (ISO)

animal organ morphogenesis (IEA)

ascending aorta morphogenesis (ISO)

atrial septum morphogenesis (ISO)

atrial septum primum morphogenesis (ISO)

atrioventricular valve morphogenesis (ISO)

axon guidance (ISO)

blood vessel development (ISO)

blood vessel remodeling (ISO)

cardiac epithelial to mesenchymal transition (IEA,ISS)

cardiac muscle cell proliferation (IEA,ISS)

cardiac right ventricle morphogenesis (ISO)

cardioblast differentiation (IEA,ISS)

cartilage condensation (ISO)

cell migration (IEA,ISS)

cell morphogenesis (IEA,ISS)

cell-cell junction organization (IEA,ISS)

collagen fibril organization (IEA,ISS)

cranial skeletal system development (ISO)

digestive tract development (ISO)

dopamine biosynthetic process (ISO)

embryonic digestive tract development (IEA,ISS)

embryonic limb morphogenesis (ISO)

embryonic neurocranium morphogenesis (ISO)

endocardial cushion fusion (ISO)

endocardial cushion morphogenesis (ISO)

epithelial cell differentiation (IEA,ISS)

epithelial to mesenchymal transition (IEA,ISS)

extracellular matrix organization (ISO)

extrinsic apoptotic signaling pathway (IEA,ISS)

extrinsic apoptotic signaling pathway in absence of ligand (ISO)

eye development (IEA,ISS)

face morphogenesis (ISO)

female pregnancy (ISO)

frontal suture morphogenesis (ISO)

glial cell migration (IEA,ISS)

hair follicle development (IEA,ISO,ISS)

hair follicle morphogenesis (ISO)

heart development (IEA,ISO,ISS)

heart morphogenesis (IEA,ISS)

heart valve morphogenesis (ISO)

hemopoiesis (ISO)

hindbrain development (ISO)

inner ear development (ISO)

kidney development (ISO)

male gonad development (ISO)

membranous septum morphogenesis (ISO)

negative regulation of angiogenesis (IEA)

negative regulation of apoptotic process (ISO)

negative regulation of cartilage development (ISO)

negative regulation of cell growth (IEA,ISS)

negative regulation of cell population proliferation (IEA,ISO,ISS)

negative regulation of epithelial cell proliferation (IEA,ISS)

negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation (ISO)

negative regulation of gene expression (IEA)

negative regulation of macrophage cytokine production (IEA,ISS)

negative regulation of Ras protein signal transduction (ISO)

negative regulation of release of sequestered calcium ion into cytosol (ISO)

neural retina development (ISO)

neural tube closure (ISO)

neuron development (ISO)

neuron fate commitment (ISO)

neutrophil chemotaxis (ISO)

outflow tract morphogenesis (ISO)

outflow tract septum morphogenesis (ISO)

pancreas development (ISO)

pericyte cell differentiation (ISO)

pharyngeal arch artery morphogenesis (ISO)

positive regulation of activation-induced cell death of T cells (ISO)

positive regulation of apoptotic process (ISO)

positive regulation of cardiac epithelial to mesenchymal transition (ISO)

positive regulation of cardioblast differentiation (IEA,ISS)

positive regulation of cell adhesion mediated by integrin (IEA,ISS)

positive regulation of cell cycle (ISO)

positive regulation of cell division (IEA)

positive regulation of cell growth (IEA)

positive regulation of cell migration (ISO)

positive regulation of cell population proliferation (IEA,ISO,ISS)

positive regulation of epithelial cell migration (IEA,ISS)

positive regulation of epithelial to mesenchymal transition (IEA,ISS)

positive regulation of epithelial to mesenchymal transition involved in endocardial cushion formation (ISO)

positive regulation of extracellular matrix disassembly (ISO)

positive regulation of extrinsic apoptotic signaling pathway in absence of ligand (ISO)

positive regulation of gene expression (ISO)

positive regulation of heart contraction (IEA,ISS)

positive regulation of immune response (ISO)

positive regulation of integrin biosynthetic process (IEA,ISS)

positive regulation of miRNA transcription (IEA)

positive regulation of neuron apoptotic process (IEA,ISS)

positive regulation of Notch signaling pathway (IEA)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA,ISS)

positive regulation of protein localization to nucleus (ISO)

positive regulation of protein secretion (IEA,ISS)

positive regulation of SMAD protein signal transduction (IEA,ISS)

positive regulation of stress-activated MAPK cascade (IEA,ISS)

positive regulation of timing of catagen (IEA,ISS)

pulmonary valve morphogenesis (ISO)

regulation of actin cytoskeleton organization (ISO)

regulation of apoptotic process (ISO)

regulation of apoptotic process involved in outflow tract morphogenesis (ISO)

regulation of cell population proliferation (IEA,ISS)

regulation of complement-dependent cytotoxicity (ISO)

regulation of extracellular matrix organization (ISO)

regulation of timing of catagen (IEA)

regulation of transforming growth factor beta2 production (IEA,ISS)

response to cytokine (ISO)

response to estradiol (ISO)

response to estrogen (ISO)

response to hypoxia (IEA)

response to laminar fluid shear stress (ISO)

response to organonitrogen compound (ISO)

response to progesterone (IEA,ISS)

response to retinoic acid (ISO)

response to vitamin D (ISO)

response to wounding (IEA,ISS)

response to xenobiotic stimulus (ISO)

salivary gland morphogenesis (IEA,ISS)

secondary palate development (ISO)

signal transduction (ISS)

signaling (IEA,ISS)

skeletal muscle tissue development (ISO)

skeletal system development (ISO)

somatic stem cell division (ISO)

substantia propria of cornea development (ISO)

thyroid gland development (ISO)

tissue development (IEA)

transforming growth factor beta receptor signaling pathway (IEA,ISS)

tube development (IEA)

uterus development (ISO)

ventricular septum morphogenesis (ISO)

ventricular trabecula myocardium morphogenesis (ISO)

Cellular Component

axon (ISO)

basement membrane (ISO)

cell surface (ISO)

collagen-containing extracellular matrix (IEA)

endosome (ISO)

extracellular matrix (ISS)

extracellular region (IEA,ISS)

extracellular space (IEA,ISO,ISS)

neuronal cell body (ISO)

secretory granule (ISO)

trans-Golgi network (ISO)

Molecular Function

amyloid-beta binding (IEA,ISS)

growth factor activity (IEA)

identical protein binding (ISO)

protein binding (ISO)

protein homodimerization activity (IEA,ISS)

protein-containing complex binding (ISO)

signaling receptor binding (IEA,ISS)

transforming growth factor beta receptor binding (IEA,ISS)

type II transforming growth factor beta receptor binding (IEA,ISS)

type III transforming growth factor beta receptor binding (IEA,ISS)

Molecular Pathway Annotations Click to see Annotation Detail View

glypican signaling pathway (ISO)

Hedgehog signaling pathway (ISO)

transforming growth factor-beta Smad dependent signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Tgfb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	58,300,141 - 58,383,975 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936628	308,691 - 394,007 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936628	310,720 - 394,002 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TGFB2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	218,345,336 - 218,444,619 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	218,345,336 - 218,444,619 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	218,518,678 - 218,617,961 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	216,586,491 - 216,681,596 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	214,908,262 - 215,003,365	NCBI
Celera	1	191,735,848 - 191,834,418 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI
HuRef	1	189,186,842 - 189,286,057 (+)	NCBI		HuRef
CHM1_1	1	219,791,024 - 219,890,484 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	217,580,100 - 217,679,392 (+)	NCBI		T2T-CHM13v2.0

Tgfb2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	186,354,984 - 186,441,504 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	186,354,989 - 186,438,186 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	186,622,787 - 186,709,697 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	186,622,792 - 186,705,989 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	188,447,065 - 188,529,871 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	188,324,430 - 188,406,777 (-)	NCBI		MGSCv36	mm8
Celera	1	193,563,609 - 193,649,724 (-)	NCBI		Celera
Cytogenetic Map	1	H5	NCBI
cM Map	1	89.95	NCBI

Tgfb2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	13	98,160,075 - 98,261,771 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	98,160,087 - 98,261,405 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	100,678,931 - 100,778,632 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	102,066,560 - 102,165,910 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	99,261,239 - 99,360,947 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	105,039,639 - 105,142,010 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	105,039,853 - 105,141,030 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	109,679,866 - 109,792,609 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	102,718,703 - 102,818,768 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	102,907,748 - 103,007,811 (-)	NCBI
Celera	13	97,669,691 - 97,769,426 (-)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

Tgfb2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	172,814 - 249,248 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	174,949 - 249,248 (-)	NCBI	ChiLan1.0	ChiLan1.0

TGFB2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	1	30,925,280 - 31,023,656 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	193,907,398 - 194,005,800 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	198,758,718 - 198,856,853 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	198,758,751 - 198,859,041 (+)	Ensembl	panpan1.1		panPan2

TGFB2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	13,430,832 - 13,511,655 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	13,429,148 - 13,510,242 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	13,472,728 - 13,552,654 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	13,464,207 - 13,544,357 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	13,464,807 - 13,545,256 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	13,473,487 - 13,553,481 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	13,819,811 - 13,899,809 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	14,128,921 - 14,209,014 (+)	NCBI		UU_Cfam_GSD_1.0

TGFB2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	8,305,539 - 8,390,341 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	8,306,136 - 8,435,307 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	10,353,794 - 10,476,143 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	10	p16	NCBI

TGFB2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	11,163,651 - 11,259,868 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	11,163,100 - 11,258,470 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	11,574,533 - 11,672,282 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tgfb2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624835	2,363,139 - 2,437,643 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624835	2,363,059 - 2,436,536 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013362692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021732985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021732986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010004404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000001247 ⟹ ENSSTOP00000001118

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936628	308,691 - 394,007 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000020710 ⟹ ENSSTOP00000017667

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936628	308,691 - 394,007 (-)	Ensembl

RefSeq Acc Id:

XM_013362692 ⟹ XP_013218146

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	58,300,141 - 58,383,975 (-)	NCBI
SpeTri2.0	NW_004936628	310,720 - 394,002 (-)	NCBI

Sequence:

show sequence

AAAAAATGCACTACTGTCTGCTGAGCGCTTTTCTGATCCTGCATCTGGTCACGGTCGCGCTCAG
CCTGTCTACCTGCAGCACACTCGATATGGACCAGTTTATGCGCAAGAGGATCGAGGCGATCCGC
GGGCAGATCCTGAGCAAGCTGAAGCTCACCAGCCCTCCTGAAGACTACCCTGAGCCCGAGGAGG
TCCCCCCGGAGGTGATTTCCATCTACAACAGCACTAGGGACTTGCTCCAGGAGAAAGCGAGCCG
AAGGGCGGCCGCCTGCGAGCGCGAGAGAAGCGACGAGGAGTACTACGCCAAGGAGGTTTACAAA
ATAGACATGCCGTCCTTCTTCCCCTCCGAAAATGCCATCCCGCCCACTTTCTACAGACCCTACT
TCAGAATTGTCCGGTTTGATGTGTCAACCTTGGAGAAGAATGCTTCCAATTTGGTGAAAGCAGA
GTTCAGAGTCTTTCGTTTGCAGAACCCCAAAGCCAGAGTGCCTGAACAACGGATTGAACTCTAT
CAGATCCTCAAATCCAAAGATTTAACATCTCCAACCCAGCGCTACATTGACAGCAAAGTCGTGA
AAACAAGAGCAGAAGGCGAATGGCTGTCCTTCGATGTGACTGATGCAGTTCATGAGTGGCTTCA
CCATAAAGATAGGAACCTGGGATTTAAAATAAGTTTACATTGTCCCTGCTGTACCTTTGTACCA
TCCAACAATTACATCATACCAAATAAAAGTGAAGAGCTAGAAGCAAGATTTGCAGGTATTGATG
GCACCTCCACATATACCAGTGGTGATCAGAAAACTATAAAGTCCACTAGGAAAAAAAACAGTGG
GAAGACCCCACATCTCCTGCTAATGTTATTGCCCTCCTACAGACTTGAGTCACAACAGTCCAAC
CGGCGGAAGAAGCGTGCTTTGGATGCGGCCTATTGTTTTAGAAATGTGCAGGATAATTGCTGCC
TACGTCCACTTTACATTGATTTCAAGAGGGATCTTGGGTGGAAATGGATACATGAACCTAAAGG
GTACAATGCCAACTTCTGTGCTGGAGCGTGCCCATATTTATGGAGTTCAGATACTCAGCACAGC
AGGGTTCTCAGTTTATATAACACCATAAATCCAGAAGCATCTGCTTCTCCTTGCTGTGTGTCCC
AAGATTTGGAACCGCTAACCATTCTCTACTACATCGGCAAGACACCCAAGATCGAACAGCTTTC
CAATATGATTGTAAAGTCTTGCAAATGCAGCTAAACTTCTTGGAAAAATGACAAGGCAGAAATC
ATGATAACAACAGCAACGACCATGATGATGCTTGTAACAAGAAAACATAGAGAGCCTTGTTTCA
TCAGTGTTAACAGATTTTGAAAAAGCGGTACTAGTTCAAATACTTTGGAAGTTTGCGTTCTGTT
TGTTAAAACTGGCATCTGAAATGAAAAAAGTGAAAGGCCTTATTCTACATTTCACCTACTTTGT
AAGTGAGAGAGAAGAAGCAAAATCTTCTTTTTTTTTTTTAAGAAAAAAATAAACACTGGAAGAA
TTTGTTAGTGTTAATTATGTGAAAGAAAAAAAAAACCAAAAAACAGGAAAATCCCATTAAGTGG
AGTTGCTGTACGTACCGTTCCTATCCCACGCCTCACTTGATTTTTCTGTATTGCTATGCAATAG
GCACCCCTCCCGTTCTTACTCTTAGAGTTAACAGTGAGTTATTTATTGTGTGTTACTATATAAT
GAACGTTTCATTGCCCTTGGAAAATAAAACAGGTGTATAAAGTGGAGACCAAATGCTTTGCCAG
AAACTCATGGATGGCTTAAAGAACTTGAATTCAAACGAGCCAGAAAAAAATAAGAGGTCATATT
AACGGGATGAAAACCCAAGTGAGTTATTACATGACCAAGCGAGTCTGCATTAAGATAAAGACCC
TGAGAACACATGCCGTGTACCAACTGCCAAAGGAAGCTTCGTGTAAGGTTCAAACACTAAAAAT
CCTGTTAATAAGAACAGAATGAGTCTGTAAGATTTTTTTTTTTAATTTTCCTTTTAATTGTAAA
TGGTTCTTTGTCAGTTTGGCATACCAGTGAAATGTTGAAATGTTTTGACATGTACTGATCAAAC
TTAGGACCTTCGAGTATTGCTGTATAGCTATGCTACAGTTTTTATTTTTTCTTTGTTTTGGTAT
ATGTAACCAGTCCTGTATTATTAAAATAGATGGGCATAGAAGCCAGCATAATTGAAAACACATC
TGCGGATCTCGTTTGCAAACTATTAAATCAAAACATTAACTACTTTACGTGTAATGTGTAAATT
CTTACCATATTTTTTATATTCTGTAATAATGTCAACTATGATTTAGATTGGACTTAATTTGGGC
TCTTTTTAATGATCATTCACAATTGTATGTTTCCTTTAGCCGGCCAGTACTTTTGAGTAAAACC
CCTAGATTTTGACTTGCACTATAAATACATTTTTAAAATAGTATTTGCTCTACTTGTGCTTTGT
GTATTGTTCATTTTTATGACATAAGCTACCTGGATCTACTTGTCCTTTTTTTTTCTTTTATGAA
AAGAATAGATTTGAGTTCAAGTGGTCTTCCTTCATCTTCTAAGCATAATTCATAACCAAGTCAG
TTAGGAAGCTTCTACTTTAGGAAAATGGGGATATAGTGAACACATAGATAAGTGAGGGAAATGT
TTTAGTTTTAATGAGGGTTTAAAGATCTGAACTCAGAATCTTGGACTGAGTTAAGAAAGGGTTC
TCTAATTTGACTTAATTAGTGTTTTCACAGAATTTTATTATTACTTTAAAGAGGGCAATTCGAA
GAGAACTTCTTTTCCTTTAAAGTGAGATTTTTAGTGTTAACGGGAAATTGAAAAAAATAGACAT
TTTATTTGGTTTTTCAAAAGAGGGAAGAGTCCAGGTCAGCATTAGTCATTTCATTCATTTCACT
GAAGTTAAGACTTTTATAGATGTTCTTTGAAGGTTAGAAAGGCACAAGCCAGTGCCTCCCCTGA
TCAAAACATTCTTTCCTTCCTCTGAATAAGAGTCACCTAGAGCTGAGGCTAACACTTACTTTGC
TTTAATAACTGAGTTGCATCATTGCAGAGGAGGTACCTCGTGTTAGGTTTGTAGGATATATTTG
TCACTTATTCAGGTTTAAGATAAAAATGTACAGGTAAAACAATGGAATACTTTCAGTTTCACCT
AAAGGGCAGCAGAGTGAGGCATGAATCCAAAGAGAAGTTGATTGGTATGGTGTGCTTCTTTTTT
GGAATTTCTCACCATGAATTCAAATGAAGAATTGGATTTTGCAAGTTTGAAAACTGGAAAAGCA
AGAGATGGGATGCCGCAAATAGTGAACAATCCTTGTATTGGGTGGAACCCAATCCCAGATTTGA
CTGTGTGTAATTTTTTTTCCTCTTCCACTTTTCTATTAATTCTGTGTAAATCACTTTTATTTCT
GCAGGTATCTTCCTCTCAGATAAAACAACATTTTGTTTTGTATTATTTTGTCTTTCCTTATGAA
TGCACTGATAATATTTTAAATGCTCTATTTTAAGATCTCTTGAATCTTTTTTTTTTTAATTTGG
GGGTTCTATAAGGTCTTGATTTCCCATAAGTAAATATTGCCGTGGGAGGGGAGGGTGGTGGGAG
GGAGTCGTCGGGGAAGTGTTAGTACGTGGGTGGGGACAGCAGTTTGTATGTGTTAAGCAGCAGT
ACAATTTTATGGTTGGCATGGTTAAAAAGATGGAATATAAGAATAGCTGTTTTGTATTTTGATG
ACCAATTATGCTGTATTTTAACACAATGTATGTCTGTTCTTTTGTGGTGCTCTAGTGGTAAATA
AATTATTTCAATTATA

hide sequence

RefSeq Acc Id:

XM_021732985 ⟹ XP_021588660

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	58,300,141 - 58,383,975 (-)	NCBI
SpeTri2.0	NW_004936628	310,720 - 394,002 (-)	NCBI

Sequence:

show sequence

AAAAAATGCACTACTGTCTGCTGAGCGCTTTTCTGATCCTGCATCTGGTCACGGTCGCGCTCAG
CCTGTCTACCTGCAGCACACTCGATATGGACCAGTTTATGCGCAAGAGGATCGAGGCGATCCGC
GGGCAGATCCTGAGCAAGCTGAAGCTCACCAGCCCTCCTGAAGACTACCCTGAGCCCGAGGAGG
TCCCCCCGGAGGTGATTTCCATCTACAACAGCACTAGGGACTTGCTCCAGGAGAAAGCGAGCCG
AAGGGCGGCCGCCTGCGAGCGCGAGAGAAGCGACGAGGAGTACTACGCCAAGGAGGTTTACAAA
ATAGACATGCCGTCCTTCTTCCCCTCCGAAACTGTCTGCCCAGTTGTTACAACACCCTCTGGCT
CAGTGGGCAGCTTGTGCGCCAGACAGTCCCAGGTGCTCTGTGGGTACCTTGATGCCATCCCGCC
CACTTTCTACAGACCCTACTTCAGAATTGTCCGGTTTGATGTGTCAACCTTGGAGAAGAATGCT
TCCAATTTGGTGAAAGCAGAGTTCAGAGTCTTTCGTTTGCAGAACCCCAAAGCCAGAGTGCCTG
AACAACGGATTGAACTCTATCAGATCCTCAAATCCAAAGATTTAACATCTCCAACCCAGCGCTA
CATTGACAGCAAAGTCGTGAAAACAAGAGCAGAAGGCGAATGGCTGTCCTTCGATGTGACTGAT
GCAGTTCATGAGTGGCTTCACCATAAAGATAGGAACCTGGGATTTAAAATAAGTTTACATTGTC
CCTGCTGTACCTTTGTACCATCCAACAATTACATCATACCAAATAAAAGTGAAGAGCTAGAAGC
AAGATTTGCAGGTATTGATGGCACCTCCACATATACCAGTGGTGATCAGAAAACTATAAAGTCC
ACTAGGAAAAAAAACAGTGGGAAGACCCCACATCTCCTGCTAATGTTATTGCCCTCCTACAGAC
TTGAGTCACAACAGTCCAACCGGCGGAAGAAGCGTGCTTTGGATGCGGCCTATTGTTTTAGAAA
TGTGCAGGATAATTGCTGCCTACGTCCACTTTACATTGATTTCAAGAGGGATCTTGGGTGGAAA
TGGATACATGAACCTAAAGGGTACAATGCCAACTTCTGTGCTGGAGCGTGCCCATATTTATGGA
GTTCAGATACTCAGCACAGCAGGGTTCTCAGTTTATATAACACCATAAATCCAGAAGCATCTGC
TTCTCCTTGCTGTGTGTCCCAAGATTTGGAACCGCTAACCATTCTCTACTACATCGGCAAGACA
CCCAAGATCGAACAGCTTTCCAATATGATTGTAAAGTCTTGCAAATGCAGCTAAACTTCTTGGA
AAAATGACAAGGCAGAAATCATGATAACAACAGCAACGACCATGATGATGCTTGTAACAAGAAA
ACATAGAGAGCCTTGTTTCATCAGTGTTAACAGATTTTGAAAAAGCGGTACTAGTTCAAATACT
TTGGAAGTTTGCGTTCTGTTTGTTAAAACTGGCATCTGAAATGAAAAAAGTGAAAGGCCTTATT
CTACATTTCACCTACTTTGTAAGTGAGAGAGAAGAAGCAAAATCTTCTTTTTTTTTTTTAAGAA
AAAAATAAACACTGGAAGAATTTGTTAGTGTTAATTATGTGAAAGAAAAAAAAAACCAAAAAAC
AGGAAAATCCCATTAAGTGGAGTTGCTGTACGTACCGTTCCTATCCCACGCCTCACTTGATTTT
TCTGTATTGCTATGCAATAGGCACCCCTCCCGTTCTTACTCTTAGAGTTAACAGTGAGTTATTT
ATTGTGTGTTACTATATAATGAACGTTTCATTGCCCTTGGAAAATAAAACAGGTGTATAAAGTG
GAGACCAAATGCTTTGCCAGAAACTCATGGATGGCTTAAAGAACTTGAATTCAAACGAGCCAGA
AAAAAATAAGAGGTCATATTAACGGGATGAAAACCCAAGTGAGTTATTACATGACCAAGCGAGT
CTGCATTAAGATAAAGACCCTGAGAACACATGCCGTGTACCAACTGCCAAAGGAAGCTTCGTGT
AAGGTTCAAACACTAAAAATCCTGTTAATAAGAACAGAATGAGTCTGTAAGATTTTTTTTTTTA
ATTTTCCTTTTAATTGTAAATGGTTCTTTGTCAGTTTGGCATACCAGTGAAATGTTGAAATGTT
TTGACATGTACTGATCAAACTTAGGACCTTCGAGTATTGCTGTATAGCTATGCTACAGTTTTTA
TTTTTTCTTTGTTTTGGTATATGTAACCAGTCCTGTATTATTAAAATAGATGGGCATAGAAGCC
AGCATAATTGAAAACACATCTGCGGATCTCGTTTGCAAACTATTAAATCAAAACATTAACTACT
TTACGTGTAATGTGTAAATTCTTACCATATTTTTTATATTCTGTAATAATGTCAACTATGATTT
AGATTGGACTTAATTTGGGCTCTTTTTAATGATCATTCACAATTGTATGTTTCCTTTAGCCGGC
CAGTACTTTTGAGTAAAACCCCTAGATTTTGACTTGCACTATAAATACATTTTTAAAATAGTAT
TTGCTCTACTTGTGCTTTGTGTATTGTTCATTTTTATGACATAAGCTACCTGGATCTACTTGTC
CTTTTTTTTTCTTTTATGAAAAGAATAGATTTGAGTTCAAGTGGTCTTCCTTCATCTTCTAAGC
ATAATTCATAACCAAGTCAGTTAGGAAGCTTCTACTTTAGGAAAATGGGGATATAGTGAACACA
TAGATAAGTGAGGGAAATGTTTTAGTTTTAATGAGGGTTTAAAGATCTGAACTCAGAATCTTGG
ACTGAGTTAAGAAAGGGTTCTCTAATTTGACTTAATTAGTGTTTTCACAGAATTTTATTATTAC
TTTAAAGAGGGCAATTCGAAGAGAACTTCTTTTCCTTTAAAGTGAGATTTTTAGTGTTAACGGG
AAATTGAAAAAAATAGACATTTTATTTGGTTTTTCAAAAGAGGGAAGAGTCCAGGTCAGCATTA
GTCATTTCATTCATTTCACTGAAGTTAAGACTTTTATAGATGTTCTTTGAAGGTTAGAAAGGCA
CAAGCCAGTGCCTCCCCTGATCAAAACATTCTTTCCTTCCTCTGAATAAGAGTCACCTAGAGCT
GAGGCTAACACTTACTTTGCTTTAATAACTGAGTTGCATCATTGCAGAGGAGGTACCTCGTGTT
AGGTTTGTAGGATATATTTGTCACTTATTCAGGTTTAAGATAAAAATGTACAGGTAAAACAATG
GAATACTTTCAGTTTCACCTAAAGGGCAGCAGAGTGAGGCATGAATCCAAAGAGAAGTTGATTG
GTATGGTGTGCTTCTTTTTTGGAATTTCTCACCATGAATTCAAATGAAGAATTGGATTTTGCAA
GTTTGAAAACTGGAAAAGCAAGAGATGGGATGCCGCAAATAGTGAACAATCCTTGTATTGGGTG
GAACCCAATCCCAGATTTGACTGTGTGTAATTTTTTTTCCTCTTCCACTTTTCTATTAATTCTG
TGTAAATCACTTTTATTTCTGCAGGTATCTTCCTCTCAGATAAAACAACATTTTGTTTTGTATT
ATTTTGTCTTTCCTTATGAATGCACTGATAATATTTTAAATGCTCTATTTTAAGATCTCTTGAA
TCTTTTTTTTTTTAATTTGGGGGTTCTATAAGGTCTTGATTTCCCATAAGTAAATATTGCCGTG
GGAGGGGAGGGTGGTGGGAGGGAGTCGTCGGGGAAGTGTTAGTACGTGGGTGGGGACAGCAGTT
TGTATGTGTTAAGCAGCAGTACAATTTTATGGTTGGCATGGTTAAAAAGATGGAATATAAGAAT
AGCTGTTTTGTATTTTGATGACCAATTATGCTGTATTTTAACACAATGTATGTCTGTTCTTTTG
TGGTGCTCTAGTGGTAAATAAATTATTTCAATTATA

hide sequence

RefSeq Acc Id:

XM_021732986 ⟹ XP_021588661

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	58,303,296 - 58,383,974 (-)	NCBI
SpeTri2.0	NW_004936628	310,720 - 394,001 (-)	NCBI

Sequence:

show sequence

AAAAATGCACTACTGTCTGCTGAGCGCTTTTCTGATCCTGCATCTGGTCACGGTCGCGCTCAGC
CTGTCTACCTGCAGCACACTCGATATGGACCAGTTTATGCGCAAGAGGATCGAGGCGATCCGCG
GGCAGATCCTGAGCAAGCTGAAGCTCACCAGCCCTCCTGAAGACTACCCTGAGCCCGAGGAGGT
CCCCCCGGAGGTGATTTCCATCTACAACAGCACTAGGGACTTGCTCCAGGAGAAAGCGAGCCGA
AGGGCGGCCGCCTGCGAGCGCGAGAGAAGCGACGAGGAGTACTACGCCAAGGAGGTTTACAAAA
TAGACATGCCGTCCTTCTTCCCCTCCGAAACTGTCTGCCCAGTTGTTACAACACCCTCTGGCTC
AGTGGGCAGCTTGTGCGCCAGACAGTCCCAGGTGCTCTGTGGGTACCTTGATGCCATCCCGCCC
ACTTTCTACAGACCCTACTTCAGAATTGTCCGGTTTGATGTGTCAACCTTGGAGAAGAATGCTT
CCAATTTGGTGAAAGCAGAGTTCAGAGTCTTTCGTTTGCAGAACCCCAAAGCCAGAGTGCCTGA
ACAACGGATTGAACTCTATCAGATCCTCAAATCCAAAGATTTAACATCTCCAACCCAGCGCTAC
ATTGACAGCAAAGTCGTGAAAACAAGAGCAGAAGGCGAATGGCTGTCCTTCGATGTGACTGATG
CAGTTCATGAGTGGCTTCACCATAAAGATAGGAACCTGGGATTTAAAATAAGTTTACATTGTCC
CTGCTGTACCTTTGTACCATCCAACAATTACATCATACCAAATAAAAGTGAAGAGCTAGAAGCA
AGATTTGCAGACTTGAGTCACAACAGTCCAACCGGCGGAAGAAGCGTGCTTTGGATGCGGCCTA
TTGTTTTAGAAATGTGCAGGATAATTGCTGCCTACGTCCACTTTACATTGATTTCAAGAGGGAT
CTTGGGTGGAAATGGATACATGAACCTAAAGGGTACAATGCCAACTTCTGTGCTGGAGCGTGCC
CATATTTATGGAGTTCAGATACTCAGCACAGCAGGGTTCTCAGTTTATATAACACCATAAATCC
AGAAGCATCTGCTTCTCCTTGCTGTGTGTCCCAAGATTTGGAACCGCTAACCATTCTCTACTAC
ATCGGCAAGACACCCAAGATCGAACAGCTTTCCAATATGATTGTAAAGTCTTGCAAATGCAGCT
AAACTTCTTGGAAAAATGACAAGGCAGAAATCATGATAACAACAGCAACGACCATGATGATGCT
TGTAACAAGAAAACATAGAGAGCCTTGTTTCATCAGTGTTAACAGATTTTGAAAAAGCGGTACT
AGTTCAAATACTTTGGAAGTTTGCGTTCTGTTTGTTAAAACTGGCATCTGAAATGAAAAAAGTG
AAAGGCCTTATTCTACATTTCACCTACTTTGTAAGTGAGAGAGAAGAAGCAAAATCTTCTTTTT
TTTTTTTAAGAAAAAAATAAACACTGGAAGAATTTGTTAGTGTTAATTATGTGAAAGAAAAAAA
AAACCAAAAAACAGGAAAATCCCATTAAGTGGAGTTGCTGTACGTACCGTTCCTATCCCACGCC
TCACTTGATTTTTCTGTATTGCTATGCAATAGGCACCCCTCCCGTTCTTACTCTTAGAGTTAAC
AGTGAGTTATTTATTGTGTGTTACTATATAATGAACGTTTCATTGCCCTTGGAAAATAAAACAG
GTGTATAAAGTGGAGACCAAATGCTTTGCCAGAAACTCATGGATGGCTTAAAGAACTTGAATTC
AAACGAGCCAGAAAAAAATAAGAGGTCATATTAACGGGATGAAAACCCAAGTGAGTTATTACAT
GACCAAGCGAGTCTGCATTAAGATAAAGACCCTGAGAACACATGCCGTGTACCAACTGCCAAAG
GAAGCTTCGTGTAAGGTTCAAACACTAAAAATCCTGTTAATAAGAACAGAATGAGTCTGTAAGA
TTTTTTTTTTTAATTTTCCTTTTAATTGTAAATGGTTCTTTGTCAGTTTGGCATACCAGTGAAA
TGTTGAAATGTTTTGACATGTACTGATCAAACTTAGGACCTTCGAGTATTGCTGTATAGCTATG
CTACAGTTTTTATTTTTTCTTTGTTTTGGTATATGTAACCAGTCCTGTATTATTAAAATAGATG
GGCATAGAAGCCAGCATAATTGAAAACACATCTGCGGATCTCGTTTGCAAACTATTAAATCAAA
ACATTAACTACTTTACGTGTAATGTGTAAATTCTTACCATATTTTTTATATTCTGTAATAATGT
CAACTATGATTTAGATTGGACTTAATTTGGGCTCTTTTTAATGATCATTCACAATTGTATGTTT
CCTTTAGCCGGCCAGTACTTTTGAGTAAAACCCCTAGATTTTGACTTGCACTATAAATACATTT
TTAAAATAGTATTTGCTCTACTTGTGCTTTGTGTATTGTTCATTTTTATGACATAAGCTACCTG
GATCTACTTGTCCTTTTTTTTTCTTTTATGAAAAGAATAGATTTGAGTTCAAGTGGTCTTCCTT
CATCTTCTAAGCATAATTCATAACCAAGTCAGTTAGGAAGCTTCTACTTTAGGAAAATGGGGAT
ATAGTGAACACATAGATAAGTGAGGGAAATGTTTTAGTTTTAATGAGGGTTTAAAGATCTGAAC
TCAGAATCTTGGACTGAGTTAAGAAAGGGTTCTCTAATTTGACTTAATTAGTGTTTTCACAGAA
TTTTATTATTACTTTAAAGAGGGCAATTCGAAGAGAACTTCTTTTCCTTTAAAGTGAGATTTTT
AGTGTTAACGGGAAATTGAAAAAAATAGACATTTTATTTGGTTTTTCAAAAGAGGGAAGAGTCC
AGGTCAGCATTAGTCATTTCATTCATTTCACTGAAGTTAAGACTTTTATAGATGTTCTTTGAAG
GTTAGAAAGGCACAAGCCAGTGCCTCCCCTGATCAAAACATTCTTTCCTTCCTCTGAATAAGAG
TCACCTAGAGCTGAGGCTAACACTTACTTTGCTTTAATAACTGAGTTGCATCATTGCAGAGGAG
GTACCTCGTGTTAGGTTTGTAGGATATATTTGTCACTTATTCAGGTTTAAGATAAAAATGTACA
GGTAAAACAATGGAATACTTTCAGTTTCACCTAAAGGGCAGCAGAGTGAGGCATGAATCCAAAG
AGAAGTTGATTGGTATGGTGTGCTTCTTTTTTGGAATTTCTCACCATGAATTCAAATGAAGAAT
TGGATTTTGCAAGTTTGAAAACTGGAAAAGCAAGAGATGGGATGCCGCAAATAGTGAACAATCC
TTGTATTGGGTGGAACCCAATCCCAGATTTGACTGTGTGTAATTTTTTTTCCTCTTCCACTTTT
CTATTAATTCTGTGTAAATCACTTTTATTTCTGCAGGTATCTTCCTCTCAGATAAAACAACATT
TTGTTTTGTATTATTTTGTCTTTCCTTATGAATGCACTGATAATATTTTAAATGCTCTATTTTA
AGATCTCTTGAATCTTTTTTTTTTTAATTTGGGGGTTCTATAAGGTCTTGATTTCCCATAAGTA
AATATTGCCGTGGGAGGGGAGGGTGGTGGGAGGGAGTCGTCGGGGAAGTGTTAGTACGTGGGTG
GGGACAGCAGTTTGTATGTGTTAAGCAGCAGTACAATTTTATGGTTGGCATGGTTAAAAAGATG
GAATATAAGAATAGCTGTTTTGTATTTTGATGACCAATTATGCTGTATTTTAACACAATGTATG
TCTGTTCTTTTGTGGTGCTCTAGTGGTAAATAAATTATTTCAATTATA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013218146	(Get FASTA)	NCBI Sequence Viewer
	XP_021588660	(Get FASTA)	NCBI Sequence Viewer
	XP_021588661	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000001118.3
	ENSSTOP00000017667.1
GenBank Protein	KAG3258074	(Get FASTA)	NCBI Sequence Viewer
	KAG3258075	(Get FASTA)	NCBI Sequence Viewer
	KAG3258076	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013218146 ⟸ XM_013362692
- Peptide Label:	isoform X2
- UniProtKB:	I3MZX1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHYCLLSAFLILHLVTVALSLSTCSTLDMDQFMRKRIEAIRGQILSKLKLTSPPEDYPEPEEVP PEVISIYNSTRDLLQEKASRRAAACERERSDEEYYAKEVYKIDMPSFFPSENAIPPTFYRPYFR IVRFDVSTLEKNASNLVKAEFRVFRLQNPKARVPEQRIELYQILKSKDLTSPTQRYIDSKVVKT RAEGEWLSFDVTDAVHEWLHHKDRNLGFKISLHCPCCTFVPSNNYIIPNKSEELEARFAGIDGT STYTSGDQKTIKSTRKKNSGKTPHLLLMLLPSYRLESQQSNRRKKRALDAAYCFRNVQDNCCLR PLYIDFKRDLGWKWIHEPKGYNANFCAGACPYLWSSDTQHSRVLSLYNTINPEASASPCCVSQD LEPLTILYYIGKTPKIEQLSNMIVKSCKCS hide sequence

RefSeq Acc Id:	XP_021588660 ⟸ XM_021732985
- Peptide Label:	isoform X1
- UniProtKB:	I3LY90 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHYCLLSAFLILHLVTVALSLSTCSTLDMDQFMRKRIEAIRGQILSKLKLTSPPEDYPEPEEVP PEVISIYNSTRDLLQEKASRRAAACERERSDEEYYAKEVYKIDMPSFFPSETVCPVVTTPSGSV GSLCARQSQVLCGYLDAIPPTFYRPYFRIVRFDVSTLEKNASNLVKAEFRVFRLQNPKARVPEQ RIELYQILKSKDLTSPTQRYIDSKVVKTRAEGEWLSFDVTDAVHEWLHHKDRNLGFKISLHCPC CTFVPSNNYIIPNKSEELEARFAGIDGTSTYTSGDQKTIKSTRKKNSGKTPHLLLMLLPSYRLE SQQSNRRKKRALDAAYCFRNVQDNCCLRPLYIDFKRDLGWKWIHEPKGYNANFCAGACPYLWSS DTQHSRVLSLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS hide sequence

RefSeq Acc Id:

XP_021588661 ⟸ XM_021732986

- Peptide Label:

isoform X3

- Sequence:

show sequence

MHYCLLSAFLILHLVTVALSLSTCSTLDMDQFMRKRIEAIRGQILSKLKLTSPPEDYPEPEEVP
PEVISIYNSTRDLLQEKASRRAAACERERSDEEYYAKEVYKIDMPSFFPSETVCPVVTTPSGSV
GSLCARQSQVLCGYLDAIPPTFYRPYFRIVRFDVSTLEKNASNLVKAEFRVFRLQNPKARVPEQ
RIELYQILKSKDLTSPTQRYIDSKVVKTRAEGEWLSFDVTDAVHEWLHHKDRNLGFKISLHCPC
CTFVPSNNYIIPNKSEELEARFADLSHNSPTGGRSVLWMRPIVLEMCRIIAAYVHFTLISRGIL
GGNGYMNLKGTMPTSVLERAHIYGVQILSTAGFSVYITP

hide sequence

RefSeq Acc Id:

ENSSTOP00000017667 ⟸ ENSSTOT00000020710

RefSeq Acc Id:

ENSSTOP00000001118 ⟸ ENSSTOT00000001247

Protein Domains

TGF-beta family profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000001250	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000001247.3	UniProtKB/TrEMBL
	ENSSTOT00000020710.2	UniProtKB/TrEMBL
Gene3D-CATH	2.10.90.10	UniProtKB/TrEMBL
	2.60.120.970	UniProtKB/TrEMBL
InterPro	Cystine-knot_cytokine	UniProtKB/TrEMBL
	TGF-b_C	UniProtKB/TrEMBL
	TGF-b_propeptide	UniProtKB/TrEMBL
	TGF-beta	UniProtKB/TrEMBL
	TGF-beta-rel	UniProtKB/TrEMBL
	TGFb2	UniProtKB/TrEMBL
	TGFb_CS	UniProtKB/TrEMBL
NCBI Gene	Tgfb2	ENTREZGENE
PANTHER	PTHR11848	UniProtKB/TrEMBL
	TRANSFORMING GROWTH FACTOR BETA-2 PROPROTEIN	UniProtKB/TrEMBL
Pfam	TGF_beta	UniProtKB/TrEMBL
	TGFb_propeptide	UniProtKB/TrEMBL
PIRSF	TGF-beta	UniProtKB/TrEMBL
PRINTS	TGFBETA	UniProtKB/TrEMBL
	TGFBETA2	UniProtKB/TrEMBL
PROSITE	TGF_BETA_1	UniProtKB/TrEMBL
	TGF_BETA_2	UniProtKB/TrEMBL
SMART	TGFB	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57501	UniProtKB/TrEMBL
UniProt	I3LY90	ENTREZGENE, UniProtKB/TrEMBL
	I3MZX1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)