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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to decreased oxygen levels
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Accession:GO:0036294 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.
Comment:This term should be used when a decrease in oxygen levels is not considered a stress response. For a hypoxic stress response, consider instead 'cellular response to hypoxia ; GO:0071456'.
Synonyms:exact_synonym: cellular response to lowered oxygen levels

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cellular response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24875179) Ensembl
MGI		 PMID:24875179 GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in ISO PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chrNW_004936609:1,793,027...1,858,586
Ensembl chrNW_004936609:1,793,027...1,858,597 		JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in ISO PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chrNW_004936492:3,098,196...3,115,921
Ensembl chrNW_004936492:3,097,629...3,116,526 		JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:24875179) MGI PMID:24875179 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chrNW_004936487:19,331,183...19,386,841
Ensembl chrNW_004936487:19,331,194...19,386,892 		JBrowse link
cellular response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator ISO RGD PMID:14975182 RGD:1599599 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:12194824 RGD:8553742 NCBI chrNW_004936501:7,160,134...7,205,231
Ensembl chrNW_004936501:7,160,134...7,207,377 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:18614764 RGD:2301848 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G Pdcd10 programmed cell death 10 ISO RGD PMID:22482882 RGD:401827112 NCBI chrNW_004936593:4,650,624...4,693,387
Ensembl chrNW_004936593:4,651,114...4,692,534 		JBrowse link
cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa2 acetyl-CoA acyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:13,242,644...13,269,007
Ensembl chrNW_004936497:13,242,644...13,269,532 		JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,389,925...19,403,577
Ensembl chrNW_004936486:19,391,324...19,402,332 		JBrowse link
G Ado 2-aminoethanethiol dioxygenase involved_in ISO (PMID:31273118) UniProt PMID:31273118 NCBI chrNW_004936753:1,965,840...1,969,554 JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:19098126 RGD:8548506 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210 		JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO oxygen-glucose deprivation RGD PMID:14526224 RGD:10047409 NCBI chrNW_004936479:1,441,508...1,477,133
Ensembl chrNW_004936479:1,441,437...1,478,107 		JBrowse link
G Ak4 adenylate kinase 4 involved_in
acts_upstream_of		 ISO (PMID:30696468)
(PMID:19130895), (PMID:23474458), (PMID:26980435)		 UniProt PMID:19130895 PMID:23474458 PMID:26980435 PMID:30696468 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:20515660 RGD:5509097 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
G Angpt4 angiopoietin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:17,675,948...17,710,512
Ensembl chrNW_004936485:17,675,948...17,710,272 		JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO RGD PMID:19299913 RGD:5133278 NCBI chrNW_004936601:3,502,844...3,510,919
Ensembl chrNW_004936601:3,502,844...3,511,003 		JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:7,146,997...7,160,369
Ensembl chrNW_004936478:7,147,027...7,160,401 		JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24462679) MGI
Ensembl		 PMID:24462679 GO_REF:0000107 NCBI chrNW_004936524:1,963,427...1,969,977
Ensembl chrNW_004936524:1,963,247...1,969,998 		JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:11097477 RGD:1599264 NCBI chrNW_004936543:7,688,788...7,699,842
Ensembl chrNW_004936543:7,688,741...7,699,851 		JBrowse link
G Atf4 activating transcription factor 4 ISO oxygen-glucose deprivation RGD PMID:20444431 RGD:13464322 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO RGD PMID:29300489 RGD:13792656 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:21346155 RGD:11341705 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 ISO RGD PMID:21400481 RGD:14390075 NCBI chrNW_004936684:1,252,874...1,275,469
Ensembl chrNW_004936684:1,265,502...1,273,953 		JBrowse link
G Bad BCL2 associated agonist of cell death involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:4,924,349...4,933,683
Ensembl chrNW_004936599:4,924,789...4,933,368 		JBrowse link
G Bbc3 BCL2 binding component 3 involved_in ISO (PMID:20810912) UniProt PMID:20810912 NCBI chrNW_004936664:962,115...966,797 JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 with serum deprivation
(PMID:7595537)		 RGD
MGI
Ensembl		 PMID:7595537 PMID:20669351 GO_REF:0000107 RGD:11353793 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921 		JBrowse link
G Bcl2l1 BCL2 like 1 ISO with serum deprivation RGD PMID:20669351 RGD:11353793 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Bdkrb2 bradykinin receptor B2 ISO RGD PMID:19565561 RGD:4891057 NCBI chrNW_004936604:548,844...551,031
Ensembl chrNW_004936604:548,847...549,956 		JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19273585) RGD
Ensembl
MGI		 PMID:17379825 PMID:19273585 GO_REF:0000107 RGD:9685412 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927 		JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19273585) MGI
Ensembl		 PMID:19273585 GO_REF:0000107 NCBI chrNW_004936757:499,485...523,494
Ensembl chrNW_004936757:499,147...523,541 		JBrowse link
G Brip1 BRCA1 interacting helicase 1 ISO RGD PMID:12511571 RGD:11251702 NCBI chrNW_004936490:3,001,445...3,139,538
Ensembl chrNW_004936490:3,003,484...3,137,479 		JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ISO oxygen-glucose deprivation RGD PMID:23421680 RGD:13514095 NCBI chrNW_004936512:6,652,836...6,666,171
Ensembl chrNW_004936512:6,653,777...6,666,758 		JBrowse link
G Casr calcium sensing receptor ISO RGD PMID:21073657 RGD:7206834 NCBI chrNW_004936536:8,574,064...8,599,446
Ensembl chrNW_004936536:8,574,064...8,599,454 		JBrowse link
G Cav1 caveolin 1 ISO RGD PMID:29069575 RGD:151347449 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G Cbl Cbl proto-oncogene ISO oxygen-glucose deprivation RGD PMID:24229686 RGD:11038824 NCBI chrNW_004936542:4,136,389...4,235,746
Ensembl chrNW_004936542:4,136,511...4,228,288 		JBrowse link
G Cbs cystathionine beta-synthase involved_in ISO PMID:20149843 UniProt PMID:20149843 RGD:8554341 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388 		JBrowse link
G Ccn1 cellular communication network factor 1 ISO RGD PMID:30371213 RGD:329845516 NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358 		JBrowse link
G Ccna2 cyclin A2 ISO RGD PMID:25289051 RGD:10054493 NCBI chrNW_004936662:1,073,460...1,079,136
Ensembl chrNW_004936662:1,073,920...1,079,136 		JBrowse link
G Ccnb1 cyclin B1 ISO RGD PMID:12374461 RGD:2316579 NCBI chrNW_004936480:400,287...407,677
Ensembl chrNW_004936480:399,224...407,704 		JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO RGD PMID:28854428 RGD:152025191 NCBI chrNW_004936587:4,573,166...4,578,480
Ensembl chrNW_004936587:4,572,728...4,578,461 		JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:12031707 RGD:8663470 NCBI chrNW_004936726:381,888...425,565
Ensembl chrNW_004936726:381,835...423,311 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735 		JBrowse link
G Clca1 chloride channel accessory 1 ISO RGD PMID:18616988 RGD:4188872 NCBI chrNW_004936865:155,284...188,988 JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (PMID:18752464)
(MGI:5543770|PMID:18752464)		 UniProt PMID:18752464 MGI:5543770 NCBI chrNW_004936483:17,216,288...17,296,430
Ensembl chrNW_004936483:17,216,213...17,294,534 		JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISO (PMID:18752464)
(MGI:5543770|PMID:18752464)		 UniProt PMID:18752464 MGI:5543770 NCBI chrNW_004936477:12,727,325...12,798,733 JBrowse link
G Cysltr1 cysteinyl leukotriene receptor 1 ISO oxygen-glucose deprivation RGD PMID:17910051 RGD:5144007 NCBI chrNW_004936547:479,261...504,757 JBrowse link
G Cysltr2 cysteinyl leukotriene receptor 2 ISO oxygen-glucose deprivation RGD PMID:17910051 RGD:5144007 NCBI chrNW_004936565:1,917,970...1,919,027 JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO RGD PMID:18664364 RGD:150429768 NCBI chrNW_004936831:799,948...946,139
Ensembl chrNW_004936831:865,965...946,139 		JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO oxygen-glucose deprivation RGD PMID:26294080 RGD:11553310 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO oxygen-glucose deprivation RGD PMID:30653356 RGD:155663383 NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253 		JBrowse link
G Dnm1l dynamin 1 like ISO oxygen-glucose deprivation RGD PMID:23658809 RGD:12738215 NCBI chrNW_004936607:3,576,357...3,632,423
Ensembl chrNW_004936607:3,576,392...3,632,554 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:24282625 RGD:9589039 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610 		JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:20969567 RGD:7248614 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613 		JBrowse link
G E2f1 E2F transcription factor 1 ISO RGD PMID:19088195 RGD:2316261 NCBI chrNW_004936561:6,894,827...6,901,058
Ensembl chrNW_004936561:6,896,063...6,900,026 		JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:9551744 RGD:8662285 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772 		JBrowse link
G Egln1 egl-9 family hypoxia inducible factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:19,343,770...19,386,087 JBrowse link
G Egln2 egl-9 family hypoxia inducible factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:3,061,391...3,070,219
Ensembl chrNW_004936661:3,061,308...3,070,192 		JBrowse link
G Egln3 egl-9 family hypoxia inducible factor 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936494:8,240,272...8,267,487
Ensembl chrNW_004936494:8,238,858...8,267,606 		JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21220915 RGD:5131857 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749 		JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ISO RGD PMID:10100614 RGD:10401146 NCBI chrNW_004936710:1,446,030...1,461,945 JBrowse link
G Eln elastin ISO RGD PMID:16055482 RGD:9585727 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G Endog endonuclease G ISO RGD PMID:17379825 RGD:9685412 NCBI chrNW_004936487:16,282,115...16,285,486
Ensembl chrNW_004936487:16,282,398...16,285,418 		JBrowse link
G Eno1 enolase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936623:3,115,357...3,130,289
Ensembl chrNW_004936623:3,115,081...3,128,183 		JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:12099714 GO_REF:0000107 GO_REF:0000118 RGD:11041576 NCBI chrNW_004936508:5,855,748...5,938,879
Ensembl chrNW_004936508:5,855,732...5,938,856 		JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha ISO RGD PMID:12752442 RGD:10401130 NCBI chrNW_004936697:2,154,517...2,199,913
Ensembl chrNW_004936697:2,154,065...2,199,926 		JBrowse link
G Fabp1 fatty acid binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:738,361...743,073
Ensembl chrNW_004936712:738,348...743,955 		JBrowse link
G Fam162a family with sequence similarity 162 member A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936536:8,697,631...8,725,667
Ensembl chrNW_004936536:8,697,595...8,730,329 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:12031707 RGD:8663470 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:31093967 RGD:155882597 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019 		JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO RGD PMID:11981751 RGD:634296 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041 		JBrowse link
G Fmn2 formin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:9,832,790...10,169,488
Ensembl chrNW_004936526:9,833,128...10,169,267 		JBrowse link
G Fndc1 fibronectin type III domain containing 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004936489:10,760,209...10,820,377
Ensembl chrNW_004936489:10,736,182...10,819,754 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122 		JBrowse link
G Foxo3 forkhead box O3 ISO RGD PMID:24278276 RGD:10402204 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837 		JBrowse link
G Fxn frataxin ISO RGD PMID:26071548 RGD:401793712 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G Gad1 glutamate decarboxylase 1 ISO RGD PMID:11259512 RGD:401900595 NCBI chrNW_004936509:1,160,559...1,201,037
Ensembl chrNW_004936509:1,161,094...1,201,576 		JBrowse link
G Gad2 glutamate decarboxylase 2 ISO RGD PMID:11259512 RGD:401900595 NCBI chrNW_004936484:1,737,806...1,810,378
Ensembl chrNW_004936484:1,737,520...1,810,398 		JBrowse link
G Gata6 GATA binding protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399 		JBrowse link
G Gnb1 G protein subunit beta 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004936737:1,518,855...1,554,926
Ensembl chrNW_004936737:1,524,325...1,555,102 		JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004936803:67,933...71,508
Ensembl chrNW_004936803:67,608...71,541 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24011070) RGD
MGI
TreeGrafter
Ensembl		 PMID:18248612 PMID:19220706 PMID:24011070 GO_REF:0000107 GO_REF:0000118 RGD:9068456 RGD:9068884 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha NOT|involved_in ISO
IEA		 (PMID:11573933) UniProt
TreeGrafter		 PMID:11573933 GO_REF:0000118 NCBI chrNW_004936664:296,288...323,143
Ensembl chrNW_004936664:294,975...323,149 		JBrowse link
G Higd1a HIG1 hypoxia inducible domain family member 1A acts_upstream_of_or_within ISO (PMID:25683712)
(PMID:16815968), (PMID:21856340)		 MGI PMID:16815968 PMID:21856340 PMID:25683712 NCBI chrNW_004936695:2,330,939...2,341,387
Ensembl chrNW_004936695:2,330,465...2,341,681 		JBrowse link
G Hilpda hypoxia inducible lipid droplet associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,582,260...15,583,213
Ensembl chrNW_004936479:15,582,260...15,607,428 		JBrowse link
G Hmox1 heme oxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:24177414 RGD:10445837 NCBI chrNW_004936530:2,401,053...2,425,989
Ensembl chrNW_004936530:2,401,043...2,454,466 		JBrowse link
G Hp1bp3 heterochromatin protein 1 binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,665,989...6,699,722
Ensembl chrNW_004936474:6,665,507...6,700,152 		JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,005,616...4,018,135
Ensembl chrNW_004936542:4,005,610...4,018,135 		JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20631551 RGD:8662392 NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174 		JBrowse link
G Il7 interleukin 7 ISO RGD PMID:19055876 RGD:10402937 NCBI chrNW_004936702:110,625...162,957
Ensembl chrNW_004936702:111,211...162,322 		JBrowse link
G Inhba inhibin subunit beta A ISO RGD PMID:30765322 RGD:329849112 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chrNW_004936809:891,407...900,311
Ensembl chrNW_004936809:890,717...900,326 		JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO oxygen-glucose deprivation RGD PMID:16135072 PMID:22159112 RGD:12904046 RGD:6893269 NCBI chrNW_004936471:36,547,552...36,601,327
Ensembl chrNW_004936471:36,547,500...36,600,636 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:17285299 RGD:6482794 NCBI chrNW_004936577:3,896,455...4,198,396
Ensembl chrNW_004936577:3,896,390...4,198,411 		JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 ISO RGD PMID:17285299 RGD:6482794 NCBI chrNW_004936548:646,019...1,120,426
Ensembl chrNW_004936548:645,925...1,121,888 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004936659:1,890,786...1,892,619
Ensembl chrNW_004936659:1,891,080...1,892,123 		JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in ISO PMID:25352783 UniProt PMID:25352783 RGD:10047379 NCBI chrNW_004936605:4,370,222...4,828,972
Ensembl chrNW_004936605:4,372,671...4,825,423 		JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chrNW_004936628:3,155,261...3,284,375
Ensembl chrNW_004936628:3,154,109...3,345,660 		JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 ISO RGD PMID:12215606 RGD:2316539 NCBI chrNW_004936493:5,767,779...5,772,043
Ensembl chrNW_004936493:5,770,103...5,772,326 		JBrowse link
G Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 ISO RGD PMID:19461047 RGD:10412041 NCBI chrNW_004936609:4,451,526...4,458,665
Ensembl chrNW_004936609:4,451,492...4,458,712 		JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:26439051 RGD:401794572 NCBI chrNW_004936706:940,585...952,484 JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:30887465 RGD:151665136 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163 		JBrowse link
G Lcn2 lipocalin 2 ISO oxygen-glucose deprivation RGD PMID:24916903 RGD:126790489 NCBI chrNW_004936487:15,721,752...15,725,396
Ensembl chrNW_004936487:15,721,684...15,728,221 		JBrowse link
G Lmna lamin A/C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,374,208...5,395,442
Ensembl chrNW_004936580:5,373,974...5,395,468 		JBrowse link
G LOC101956526 cytochrome c oxidase subunit 4 isoform 2, mitochondrial ISO RGD PMID:23303788 RGD:11344908 NCBI chrNW_004936485:18,631,826...18,637,675 JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:21302291 RGD:11040609 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO oxygen-glucose deprivation RGD PMID:32734729 RGD:155804275 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:20810912) UniProt PMID:20810912 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:268,151...299,494
Ensembl chrNW_004936567:268,151...299,494 		JBrowse link
G Mfn1 mitofusin 1 ISO oxygen-glucose deprivation RGD PMID:23658809 PMID:27833818 RGD:12738215 RGD:12910766 NCBI chrNW_004936566:3,737,315...3,775,894
Ensembl chrNW_004936566:3,737,315...3,775,693 		JBrowse link
G Mfn2 mitofusin 2 ISO oxygen-glucose deprivation RGD PMID:23658809 PMID:28478070 RGD:12738215 RGD:12910733 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556 		JBrowse link
G Mgarp mitochondria localized glutamic acid rich protein involved_in ISO (MGI:3850758|PMID:19528298) UniProt PMID:19528298 MGI:3850758 NCBI chrNW_004936535:8,321,443...8,336,773
Ensembl chrNW_004936535:8,320,874...8,336,752 		JBrowse link
G Mief1 mitochondrial elongation factor 1 ISO RGD PMID:25911325 RGD:12880381 NCBI chrNW_004936492:2,118,565...2,132,181
Ensembl chrNW_004936492:2,117,790...2,131,220 		JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:19462902 RGD:4890975 NCBI chrNW_004936619:1,207,058...1,208,010
Ensembl chrNW_004936619:1,203,746...1,208,442 		JBrowse link
G Mpl MPL proto-oncogene, thrombopoietin receptor ISO RGD PMID:15642952 RGD:10449018 NCBI chrNW_004936474:24,744,673...24,757,189
Ensembl chrNW_004936474:24,744,673...24,757,085 		JBrowse link
G Mst1 macrophage stimulating 1 ISO RGD PMID:23647599 RGD:10448278 NCBI chrNW_004936529:1,298,853...1,306,088
Ensembl chrNW_004936529:1,299,300...1,303,959 		JBrowse link
G Mstn myostatin ISO RGD PMID:30765322 RGD:329849112 NCBI chrNW_004936506:7,988,879...7,996,260
Ensembl chrNW_004936506:7,988,718...7,996,971 		JBrowse link
G Mt3 metallothionein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:8,864,512...8,866,516
Ensembl chrNW_004936475:8,864,675...8,866,506 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965 		JBrowse link
G Myocd myocardin ISO RGD PMID:20621093 RGD:5132874 NCBI chrNW_004936595:5,256,615...5,356,563
Ensembl chrNW_004936595:5,256,785...5,351,723 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO oxygen-glucose deprivation RGD PMID:28528966 RGD:13781879 NCBI chrNW_004936479:17,682,070...17,716,713
Ensembl chrNW_004936479:17,682,201...17,716,661 		JBrowse link
G Ndnf neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:593,848...624,974
Ensembl chrNW_004936662:594,331...624,980 		JBrowse link
G Ndp norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30988181) Ensembl
MGI		 PMID:30988181 GO_REF:0000107 NCBI chrNW_004936502:10,080,169...10,105,155
Ensembl chrNW_004936502:10,080,145...10,105,328 		JBrowse link
G Ndrg1 N-myc downstream regulated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:16,051,291...16,102,563
Ensembl chrNW_004936470:16,051,015...16,102,585 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:23904790 GO_REF:0000107 RGD:10412703 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
G Ngb neuroglobin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:6,094,089...6,098,876
Ensembl chrNW_004936488:6,095,016...6,098,543 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:7,087,677...7,091,334
Ensembl chrNW_004936555:7,088,577...7,091,334 		JBrowse link
G Nog noggin ISO RGD PMID:25740156 RGD:12801489 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO PMID:22082675 UniProt PMID:22082675 RGD:10047303 NCBI chrNW_004936475:17,644,299...17,648,213
Ensembl chrNW_004936475:17,644,653...17,648,211 		JBrowse link
G Nono non-POU domain containing octamer binding ISO oxygen-glucose deprivation RGD PMID:32424772 RGD:155882459 NCBI chrNW_004936762:322,413...343,126
Ensembl chrNW_004936762:321,280...341,537 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,334,487...1,343,867
Ensembl chrNW_004936664:1,334,510...1,342,321 		JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Npepps aminopeptidase puromycin sensitive involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,659,729...13,737,510
Ensembl chrNW_004936490:13,659,721...13,737,526 		JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:21444791 RGD:11535018 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:27833818 RGD:12910766 NCBI chrNW_004936711:1,027,531...1,113,796
Ensembl chrNW_004936711:1,032,935...1,106,847 		JBrowse link
G Oprd1 opioid receptor delta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,860,293...12,902,389
Ensembl chrNW_004936474:12,860,293...12,903,466 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,368,199...5,379,215
Ensembl chrNW_004936594:5,367,816...5,379,252 		JBrowse link
G Palld palladin, cytoskeletal associated protein ISO RGD PMID:16481593 RGD:2325785 NCBI chrNW_004936516:786,358...1,151,910
Ensembl chrNW_004936516:802,484...1,151,801 		JBrowse link
G Park7 Parkinsonism associated deglycase ISO RGD PMID:29069575 RGD:151347449 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ISO RGD PMID:24177414 RGD:10445837 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:23647599 RGD:10448278 NCBI chrNW_004936489:2,677,740...2,720,387
Ensembl chrNW_004936489:2,677,484...2,722,263 		JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936547:286,267...310,062
Ensembl chrNW_004936547:286,267...310,062 		JBrowse link
G Phb2 prohibitin 2 ISO RGD PMID:25031298 RGD:12903263 NCBI chrNW_004936709:854,493...859,182
Ensembl chrNW_004936709:854,698...858,851 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,574,471...6,589,478
Ensembl chrNW_004936474:6,573,623...6,589,478 		JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:19490965 RGD:7241802 NCBI chrNW_004936521:5,238,128...5,243,829
Ensembl chrNW_004936521:5,238,093...5,243,877 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:14699081), (PMID:20810912) UniProt PMID:14699081 PMID:20810912 NCBI chrNW_004936497:4,985,995...4,986,720 JBrowse link
G Ppard peroxisome proliferator activated receptor delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,799,285...23,886,606
Ensembl chrNW_004936476:23,811,641...23,828,176 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22527940 RGD:7242177 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO oxygen-glucose deprivation RGD PMID:21525936 RGD:10054236 NCBI chrNW_004936664:2,910,609...2,914,205 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:17720864 RGD:2316813 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380 		JBrowse link
G Prkce protein kinase C epsilon involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18070622) Ensembl
MGI		 PMID:18070622 GO_REF:0000107 NCBI chrNW_004936508:6,018,374...6,495,216
Ensembl chrNW_004936508:6,017,551...6,494,427 		JBrowse link
G Prl prolactin involved_in ISO (PMID:24530842) AgBase PMID:24530842 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:24875179) MGI PMID:24875179 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Ptgis prostaglandin I2 synthase involved_in IEA
ISO		 Ensembl
RGD		 PMID:19344900 GO_REF:0000107 RGD:401960096 NCBI chrNW_004936514:4,775,884...4,814,574
Ensembl chrNW_004936514:4,791,031...4,812,027 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO (PMID:21296955) UniProt PMID:21296955 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptn pleiotrophin ISO RGD PMID:16226713 PMID:17925408 RGD:10044023 RGD:9834996 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617 		JBrowse link
G Ptpn1 protein tyrosine phosphatase non-receptor type 1 ISO RGD PMID:18278556 RGD:401965430 NCBI chrNW_004936514:4,065,455...4,083,847
Ensembl chrNW_004936514:4,068,238...4,084,009 		JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D ISO RGD PMID:35848503 RGD:401976433 NCBI chrNW_004936539:2,564,815...3,369,975
Ensembl chrNW_004936539:2,564,793...2,945,293 		JBrowse link
G Rgcc regulator of cell cycle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936667:232,807...245,131
Ensembl chrNW_004936667:232,782...245,131 		JBrowse link
G Rnf146 ring finger protein 146 ISO RGD PMID:26218637 RGD:13524866 NCBI chrNW_004936639:2,394,566...2,417,452
Ensembl chrNW_004936639:2,393,150...2,417,982 		JBrowse link
G Robo1 roundabout guidance receptor 1 ISO oxygen-glucose deprivation RGD PMID:23994690 RGD:243048442 NCBI chrNW_004936505:4,329,428...4,711,310
Ensembl chrNW_004936505:4,330,303...4,709,655 		JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643 		JBrowse link
G Rtn4 reticulon 4 involved_in ISO (MGI:6274961|PMID:27763637) UniProt PMID:27763637 MGI:6274961 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360 		JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 involved_in ISO PMID:28029095 UniProt PMID:28029095 RGD:14390052 NCBI chrNW_004936469:13,872,701...14,019,170
Ensembl chrNW_004936469:13,872,701...13,971,005 		JBrowse link
G Sdhd succinate dehydrogenase complex subunit D acts_upstream_of_or_within ISO (PMID:15572694) MGI PMID:15572694 NCBI chrNW_004936612:2,357,336...2,369,204 JBrowse link
G Serpine1 serpin family E member 1 ISO RGD PMID:10590062 RGD:8547811 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215 		JBrowse link
G Sirt2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
G Sirt4 sirtuin 4 ISO RGD PMID:24029877 RGD:9586053 NCBI chrNW_004936668:628,875...633,425
Ensembl chrNW_004936668:626,938...633,466 		JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:21325818 RGD:5688411 NCBI chrNW_004936512:8,590,302...8,622,121
Ensembl chrNW_004936512:8,586,262...8,623,597 		JBrowse link
G Slc29a1 solute carrier family 29 member 1 (Augustine blood group) ISO RGD PMID:10646513 RGD:1598899 NCBI chrNW_004936476:15,849,054...15,862,486
Ensembl chrNW_004936476:15,846,606...15,862,548 		JBrowse link
G Slc2a4 solute carrier family 2 member 4 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004936595:567,267...574,051
Ensembl chrNW_004936595:567,219...574,059 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO RGD PMID:17394575 RGD:1642726 NCBI chrNW_004936508:10,894,918...11,256,084
Ensembl chrNW_004936508:10,968,656...11,253,070 		JBrowse link
G Slc8a3 solute carrier family 8 member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:13,236,480...13,370,973
Ensembl chrNW_004936495:13,236,470...13,371,011 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004936474:11,460,266...11,517,420
Ensembl chrNW_004936474:11,459,929...11,517,478 		JBrowse link
G Slit2 slit guidance ligand 2 ISO oxygen-glucose deprivation RGD PMID:26764532 RGD:11573340 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20380727 RGD:2324980 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
G Stc1 stanniocalcin 1 ISO RGD PMID:15485913 RGD:2324700 NCBI chrNW_004936555:7,240,649...7,251,668
Ensembl chrNW_004936555:7,239,198...7,251,670 		JBrowse link
G Stc2 stanniocalcin 2 ISO RGD PMID:15485913 RGD:2324700 NCBI chrNW_004936609:2,319,546...2,331,049
Ensembl chrNW_004936609:2,319,111...2,332,988 		JBrowse link
G Sumo1 small ubiquitin like modifier 1 ISO RGD PMID:17289031 RGD:9587773 NCBI chrNW_004936726:1,402,977...1,413,974
Ensembl chrNW_004936726:1,399,050...1,429,205 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21402781) MGI
Ensembl		 PMID:21402781 GO_REF:0000107 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21402781) MGI
Ensembl		 PMID:21402781 GO_REF:0000107 NCBI chrNW_004936613:1,443,663...1,467,776
Ensembl chrNW_004936613:1,443,629...1,467,229 		JBrowse link
G Tbl2 transducin beta like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,825,990...2,833,908
Ensembl chrNW_004936543:2,824,770...2,833,922 		JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO
IEA		 RGD
Ensembl		 PMID:24376652 GO_REF:0000107 RGD:11038675 NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:4,518,525...4,540,109
Ensembl chrNW_004936606:4,518,584...4,540,114 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:28854428 RGD:152025191 NCBI chrNW_004936492:6,996,627...7,046,137
Ensembl chrNW_004936492:6,996,613...7,046,190 		JBrowse link
G Tp53 tumor protein p53 involved_in IEA
ISO		 Ensembl
RGD		 PMID:17289031 GO_REF:0000107 RGD:9587773 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO PMID:31900229 ARUK-UCL PMID:31900229 RGD:126781734 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Trpc1 transient receptor potential cation channel subfamily C member 1 ISO RGD PMID:19889962 RGD:7247600 NCBI chrNW_004936540:4,340,672...4,417,655
Ensembl chrNW_004936540:4,323,528...4,418,685 		JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 ISO RGD PMID:19889962 RGD:7247600 NCBI chrNW_004936551:6,173,588...6,282,971
Ensembl chrNW_004936551:6,174,122...6,282,925 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936828:543,651...588,673
Ensembl chrNW_004936828:542,407...588,679 		JBrowse link
G Ucn2 urocortin 2 ISO RGD PMID:14519439 RGD:2306174 NCBI chrNW_004936529:347,411...348,040 JBrowse link
G Vasn vasorin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21658601) Ensembl
MGI		 PMID:21658601 GO_REF:0000107 NCBI chrNW_004936694:128,398...138,954
Ensembl chrNW_004936694:128,273...138,954 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10575000) MGI
Ensembl		 PMID:10575000 GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673 		JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:19233325 RGD:2324641 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:12,045,679...12,050,737
Ensembl chrNW_004936495:12,045,377...12,051,536 		JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A ISO RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196 		JBrowse link
G Becn1 beclin 1 ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151 		JBrowse link
G Inhba inhibin subunit beta A ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907 		JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:19531214 RGD:401851038 NCBI chrNW_004936588:1,356,769...1,361,037
Ensembl chrNW_004936588:1,356,769...1,361,037 		JBrowse link
hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8470821) Ensembl
MGI		 PMID:8470821 GO_REF:0000107 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:21302291 RGD:11040609 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904 		JBrowse link
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:2,597,593...2,633,780
Ensembl chrNW_004936509:2,597,452...2,633,780 		JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:141,745...213,495
Ensembl chrNW_004936624:142,402...213,528 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:25186293) Ensembl
MGI		 PMID:25186293 GO_REF:0000107 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
intrinsic apoptotic signaling pathway in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443 		JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20935145) Ensembl
MGI		 PMID:20935145 GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daxx death domain associated protein ISO cell death RGD PMID:17289031 RGD:9587773 NCBI chrNW_004936476:25,546,091...25,550,390
Ensembl chrNW_004936476:25,546,036...25,550,392 		JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:262,653...397,753
Ensembl chrNW_004936608:262,445...397,762 		JBrowse link
G Drd1 dopamine receptor D1 ISO cell death RGD PMID:27638511 RGD:13506952 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613 		JBrowse link
G Drd2 dopamine receptor D2 ISO cell death RGD PMID:27638511 RGD:13506952 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798 		JBrowse link
G Epha4 EPH receptor A4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31150684) ARUK-UCL
Ensembl		 PMID:31150684 GO_REF:0000107 NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO cell death RGD PMID:24048861 RGD:10412727 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO cell death RGD PMID:18539296 RGD:9590185 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874 		JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,115,357...3,130,289
Ensembl chrNW_004936623:3,115,081...3,128,183 		JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936542:4,005,616...4,018,135
Ensembl chrNW_004936542:4,005,610...4,018,135 		JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:30887465 RGD:151665136 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302 		JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO PMID:10590251 UniProt PMID:10590251 RGD:10047155 NCBI chrNW_004936475:17,644,299...17,648,213
Ensembl chrNW_004936475:17,644,653...17,648,211 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:907,118...1,041,814
Ensembl chrNW_004936540:907,112...1,041,848 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,574,471...6,589,478
Ensembl chrNW_004936474:6,573,623...6,589,478 		JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:7,427,926...7,448,700
Ensembl chrNW_004936512:7,427,729...7,449,078 		JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO (PMID:17371845) MGI PMID:17371845 NCBI chrNW_004936491:7,247,160...7,421,039
Ensembl chrNW_004936491:7,247,140...7,420,921 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25186293) Ensembl
MGI		 PMID:25186293 GO_REF:0000107 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3a DNA methyltransferase 3 alpha ISO oxygen-glucose deprivation-induced cell death RGD PMID:23516428 RGD:9589049 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610 		JBrowse link
G Ep300 E1A binding protein p300 ISO reduced metabolism in hypoxia-treated PC12 cells
reduced metabolism in hypoxia mimic CoCl2-treated PC12 cells		 RGD PMID:18586071 PMID:19103185 RGD:2311713 RGD:2311718 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chrNW_004936628:3,155,261...3,284,375
Ensembl chrNW_004936628:3,154,109...3,345,660 		JBrowse link
positive regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rwdd3 RWD domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22009797) Ensembl
MGI
TreeGrafter
InterPro		 PMID:22009797 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936537:4,019,337...4,031,951
Ensembl chrNW_004936537:4,017,661...4,031,981 		JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:26,026,878...26,032,098
Ensembl chrNW_004936474:26,026,842...26,032,218 		JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:1,331,568...1,341,854
Ensembl chrNW_004936722:1,331,566...1,341,863 		JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,860,432...7,864,050
Ensembl chrNW_004936543:7,860,448...7,863,983 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:18054269 RGD:9068899 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chrNW_004936532:7,142,580...7,284,722
Ensembl chrNW_004936532:7,145,882...7,286,244 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:19450559 RGD:7242910 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:814,649...826,008
Ensembl chrNW_004936529:813,951...826,014 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:10205047) DisProt PMID:10205047 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15871
    response to stimulus 8520
      response to abiotic stimulus 1450
        response to oxygen levels 526
          response to decreased oxygen levels 480
            cellular response to decreased oxygen levels 227
              cellular response to anoxia 4
              cellular response to hypoxia + 216
              cellular response to oxygen-glucose deprivation 6
              positive regulation of SREBP signaling pathway in response to decreased oxygen levels 0
paths to the root