ONTOLOGY REPORT - ANNOTATIONS
Term: artery development
Accession: GO:0060840
browse the term
Definition: The progression of the artery over time, from its initial formation to the mature structure. An artery is a blood vessel that carries blood away from the heart to a capillary bed.
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Acvr2b
activin A receptor type 2B
involved_in
IEA ISO
GO_REF:0000107 (PMID:19903896)
Ensembl RGD
PMID:19903896
GO_REF:0000107
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
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Acvrl1
activin A receptor like type 1
involved_in
ISO
(PMID:19903896)
RGD
PMID:19903896
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
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Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:19903896)
RGD
PMID:19903896
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
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Comt
catechol-O-methyltransferase
acts_upstream_of_or_within
ISO
(PMID:30237900)
RGD
PMID:30237900
NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642
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Ddit3
DNA-damage inducible transcript 3
involved_in
ISO
MGI:2385534 (PMID:24530784)
RGD
PMID:24530784
NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
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Efemp2
EGF containing fibulin extracellular matrix protein 2
acts_upstream_of_or_within
ISO
MGI:4410301 (PMID:19855011)
RGD
PMID:19855011
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
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Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:1857079|MGI:2385534 (PMID:24530784), (PMID:28798354)
RGD
PMID:24530784 PMID:28798354
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:98297 (PMID:16968815)
RGD
PMID:16968815
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1341884 (PMID:15680351)
RGD
PMID:15680351
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO
MGI:1341800 (PMID:15680351)
RGD
PMID:15680351
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Hoxa1
homeobox A1
involved_in
ISO
(PMID:16155570)
RGD
PMID:16155570
NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504
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Luzp1
leucine zipper protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3818454 (PMID:18801334)
Ensembl RGD
PMID:18801334
GO_REF:0000107
NCBI chr 5:148,706,094...148,781,616
Ensembl chr 5:148,706,138...148,781,609
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Rapgef3
Rap guanine nucleotide exchange factor 3
IEP
RGD
PMID:18697745
RGD:2314761
NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
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Scn11a
sodium voltage-gated channel alpha subunit 11
involved_in
IEA ISO
GO_REF:0000107 MGI:5608917 (PMID:31534133)
Ensembl RGD
PMID:31534133
GO_REF:0000107
NCBI chr 8:119,495,550...119,567,044
Ensembl chr 8:119,496,769...119,567,044
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861186|MGI:95729 (PMID:16968815)
Ensembl RGD
PMID:16968815
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Slc2a10
solute carrier family 2 member 10
acts_upstream_of_or_within
ISO
(PMID:16550171), (PMID:18565096)
RGD
PMID:16550171 PMID:18565096
NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690
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Adamts6
ADAM metallopeptidase with thrombospondin type 1 motif, 6
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 2:35,421,483...35,633,305
Ensembl chr 2:35,421,510...35,633,298
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Ap2b1
adaptor related protein complex 2 subunit beta 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
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Aplnr
apelin receptor
involved_in
ISO
(PMID:23603510)
RGD
PMID:23603510
NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
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Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO
MGI:2176467|MGI:4433295 (PMID:26102480)
RGD
PMID:26102480
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
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Cntrl
centriolin
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 3:18,428,147...18,500,362
Ensembl chr 3:18,428,103...18,500,380
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Col3a1
collagen type III alpha 1 chain
involved_in
ISO
MGI:1857431|MGI:5306912 (PMID:20587693), (PMID:21071432), (PMID:23630948)
RGD
PMID:20587693 PMID:21071432 PMID:23630948
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
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Cxcr4
C-X-C motif chemokine receptor 4
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
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Dctn5
dynactin subunit 5
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:176,689,176...176,705,907
Ensembl chr 1:176,689,156...176,705,906
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Dnm2
dynamin 2
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
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Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857473|MGI:2687362 (PMID:14585980), (PMID:31219639)
Ensembl RGD
PMID:14585980 PMID:31219639
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
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Efemp2
EGF containing fibulin extracellular matrix protein 2
involved_in
ISO
(PMID:20019329)
RGD
PMID:20019329
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
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Egr2
early growth response 2
involved_in
ISO
(PMID:25344368)
RGD
PMID:25344368
NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
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Eln
elastin
IEP
RGD
PMID:18803461
RGD:7394730
NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
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Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:1857079|MGI:3785162 (PMID:22359666), (PMID:26624227), (PMID:28798354)
RGD
PMID:22359666 PMID:26624227 PMID:28798354
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Fam3d
FAM3 metabolism regulating signaling molecule D
acts_upstream_of_or_within
ISO
(PMID:29853563)
RGD
PMID:29853563
NCBI chr15:16,538,881...16,574,468
Ensembl chr15:16,539,489...16,573,034
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Fuz
fuzzy planar cell polarity protein
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530
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Gaa
alpha glucosidase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179955 (PMID:32428018)
Ensembl RGD
PMID:32428018
GO_REF:0000107
NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
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Gla
galactosidase, alpha
acts_upstream_of_or_within
ISO
MGI:1861794 (PMID:32428018)
RGD
PMID:32428018
NCBI chr X:97,769,227...97,780,646
Ensembl chr X:97,768,996...97,780,664
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Hectd1
HECT domain E3 ubiquitin protein ligase 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 6:69,181,429...69,268,045
Ensembl chr 6:69,181,436...69,268,053
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Kif7
kinesin family member 7
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:133,639,487...133,658,539
Ensembl chr 1:133,640,065...133,658,576
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Lep
leptin
acts_upstream_of_or_within
ISO
MGI:1856424 (PMID:23413430)
RGD
PMID:23413430
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
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Lox
lysyl oxidase
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
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Loxl1
lysyl oxidase-like 1
IEP
RGD
PMID:18803461
RGD:7394730
NCBI chr 8:58,691,763...58,716,365
Ensembl chr 8:58,692,593...58,716,356
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Lrp2
LDL receptor related protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:25807483)
Ensembl RGD
PMID:25807483
GO_REF:0000107
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
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Ltbp1
latent transforming growth factor beta binding protein 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
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Megf8
multiple EGF-like-domains 8
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:32203821) GO_REF:0000107
RGD Ensembl
PMID:32203821
GO_REF:0000107
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
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Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
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Naglu
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within
ISO
MGI:1934018 (PMID:32428018)
RGD
PMID:32428018
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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Ndst1
N-deacetylase and N-sulfotransferase 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191
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Pcdha10
protocadherin alpha 10
acts_upstream_of_or_within
ISO
(PMID:34888534)
RGD
PMID:34888534
Ensembl chr18:28,581,225...28,846,211
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Pde2a
phosphodiesterase 2A
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
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Pkd2
polycystin 2, transient receptor potential cation channel
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
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Plxnd1
plexin D1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
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Prdm1
PR/SET domain 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
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Prickle1
prickle planar cell polarity protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:25807483)
Ensembl RGD
PMID:25807483
GO_REF:0000107
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
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Smad6
SMAD family member 6
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763
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Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
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Snx17
sorting nexin 17
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:25807483)
Ensembl RGD
PMID:25807483
GO_REF:0000107
NCBI chr 6:25,177,528...25,183,001
Ensembl chr 6:25,177,391...25,183,030
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Sufu
SUFU negative regulator of hedgehog signaling
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
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Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 7:111,675,829...111,707,058
Ensembl chr 7:111,686,371...111,707,058
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Adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9
involved_in
ISO
(PMID:20096780)
RGD
PMID:20096780
NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
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Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO
MGI:2176467|MGI:4433295 (PMID:26102480)
RGD
PMID:26102480
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
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Eya1
EYA transcriptional coactivator and phosphatase 1
acts_upstream_of_or_within
ISO
MGI:102780|MGI:98493|MGI:99604 (PMID:21364285)
RGD
PMID:21364285
NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
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Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:102780|MGI:109344|MGI:98493 (PMID:21364285)
RGD
PMID:21364285
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
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Fkbp10
FKBP prolyl isomerase 10
acts_upstream_of_or_within
ISO
MGI:5432211 (PMID:24777781)
RGD
PMID:24777781
NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
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Foxh1
forkhead box H1
involved_in
ISO
(PMID:15363409)
RGD
PMID:15363409
NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
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Hes1
hes family bHLH transcription factor 1
involved_in
ISO
(PMID:20122914)
RGD
PMID:20122914
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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Kat6a
lysine acetyltransferase 6A
acts_upstream_of_or_within
ISO
MGI:4418468|MGI:98493 (PMID:22921202)
RGD
PMID:22921202
NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606
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Lrp1
LDL receptor related protein 1
involved_in
ISO
(PMID:19742316)
RGD
PMID:19742316
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
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Naglu
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within
ISO
MGI:1934018 (PMID:26147524)
RGD
PMID:26147524
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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Nprl3
NPR3-like, GATOR1 complex subunit
acts_upstream_of_or_within
ISO
MGI:5426855 (PMID:22538705)
RGD
PMID:22538705
NCBI chr10:15,355,361...15,395,812
Ensembl chr10:15,355,355...15,395,810
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Pdgfrb
platelet derived growth factor receptor beta
involved_in
ISO
UniProtKB:Q91ZX7 (PMID:19742316)
RGD
PMID:19742316
NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843
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Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:4440621 (PMID:20215345)
RGD
PMID:20215345
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
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Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO
MGI:109344|MGI:98493|MGI:99604 (PMID:21364285)
RGD
PMID:21364285
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
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Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:102780|MGI:109344|MGI:3664784|MGI:99604 (PMID:17916582), (PMID:21364285)
UniProt RGD
PMID:17916582 PMID:21364285
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
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Tbx2
T-box transcription factor 2
involved_in
ISO
(PMID:15459098)
RGD
PMID:15459098
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
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Tfap2b
transcription factor AP-2 beta
involved_in
ISS ISO
GO_REF:0000024 (PMID:21829553)
UniProt RGD
PMID:21829553
GO_REF:0000024
NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520
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Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:20101701) GO_REF:0000107
RGD Ensembl
PMID:20101701
GO_REF:0000107
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Col3a1
collagen type III alpha 1 chain
involved_in
ISO
(PMID:21071432)
RGD
PMID:21071432
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
G
Efemp2
EGF containing fibulin extracellular matrix protein 2
involved_in
ISO
(PMID:26178373), (PMID:26711913)
RGD
PMID:26178373 PMID:26711913
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
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Mir143
microRNA 143
acts_upstream_of_or_within
ISO
MGI:2676830 (PMID:19816508)
RGD
PMID:19816508
NCBI chr18:55,101,006...55,101,110
Ensembl chr18:55,101,006...55,101,110
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Mir145
microRNA 145
acts_upstream_of_or_within
ISO
MGI:2676828 (PMID:19816508)
RGD
PMID:19816508
NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
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Mylk
myosin light chain kinase
involved_in
ISO
(PMID:21055718)
RGD
PMID:21055718
NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
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Prox1
prospero homeobox 1
involved_in
ISO
(PMID:19091769)
RGD
PMID:19091769
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Angptl3
angiopoietin-like 3
involved_in
ISO
(PMID:12671033)
RGD
PMID:12671033
NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957
G
Apob
apolipoprotein B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:88057 (PMID:16230502)
Ensembl RGD
PMID:16230502
GO_REF:0000107
NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
G
Apoe
apolipoprotein E
acts_upstream_of_or_within
ISO
MGI:88052 (PMID:16230502)
RGD
PMID:16230502
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
G
Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO
MGI:98493 (PMID:19855134)
RGD
PMID:19855134
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
G
Chrd
chordin
involved_in
ISO
MGI:2157350 (PMID:17685487)
RGD
PMID:17685487
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Comp
cartilage oligomeric matrix protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:27151399)
Ensembl RGD
PMID:27151399
GO_REF:0000107
NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
G
Eng
endoglin
involved_in
ISO
(PMID:10348742)
RGD
PMID:10348742
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO
MGI:1857869 (PMID:10479458)
RGD
PMID:10479458
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1857740|MGI:1857865 (PMID:10479458), (PMID:9409679)
RGD
PMID:9409679 PMID:10479458
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
G
Gja5
gap junction protein, alpha 5
involved_in
ISO
(PMID:20530546)
RGD
PMID:20530546
NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
G
Hes1
hes family bHLH transcription factor 1
involved_in
ISO
(PMID:20122914)
RGD
PMID:20122914
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hoxa1
homeobox A1
involved_in
ISO
(PMID:16155570)
RGD
PMID:16155570
NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504
G
Hoxa13
homeo box A13
acts_upstream_of_or_within
ISO
MGI:2152356 (PMID:18483557)
RGD
PMID:18483557
NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
G
Ldlr
low density lipoprotein receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:22927332)
Ensembl RGD
PMID:22927332
GO_REF:0000107
NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1857444 (PMID:7926784) GO_REF:0000024
Ensembl RGD HGNC-UCL
PMID:7926784
GO_REF:0000024 GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Notch3
notch receptor 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2687010 (PMID:23117660)
Ensembl RGD
PMID:23117660
GO_REF:0000107
NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:23639442), (PMID:24401374)
RGD
PMID:23639442 PMID:24401374
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Prdm1
PR/SET domain 1
acts_upstream_of_or_within
ISO
MGI:3605483|MGI:3605621|MGI:98493 (PMID:24821700)
RGD
PMID:24821700
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
G
Prrx1
paired related homeobox 1
acts_upstream_of_or_within
ISO
MGI:1857640|MGI:98218 (PMID:10664157)
RGD
PMID:10664157
NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866
G
Prrx2
paired related homeobox 2
acts_upstream_of_or_within
ISO
MGI:97712 (PMID:10664157)
RGD
PMID:10664157
NCBI chr 3:14,132,574...14,168,533
Ensembl chr 3:14,094,004...14,168,535
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:3583755 (PMID:23117660)
RGD
PMID:23117660
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:18952608)
Ensembl RGD
PMID:18952608
GO_REF:0000107
NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO
(PMID:17273977)
RGD
PMID:17273977
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179190|MGI:2444748|MGI:95668|MGI:99655 (PMID:11242110), (PMID:19700621), (PMID:19855134), (PMID:24821700)
UniProt RGD
PMID:11242110 PMID:19700621 PMID:19855134 PMID:24821700
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Tgfbr1
transforming growth factor, beta receptor 1
acts_upstream_of_or_within
ISO
MGI:2386570|MGI:2388050 (PMID:17078885)
RGD
PMID:17078885
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(PMID:20101701)
RGD
PMID:20101701
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
MGI:1931047 (PMID:10229225)
RGD
PMID:10229225
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO
MGI:2665014 (PMID:17767158)
RGD
PMID:17767158
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
G
Zmiz1
zinc finger, MIZ-type containing 1
acts_upstream_of_or_within
ISO
MGI:3769389 (PMID:17967885)
RGD
PMID:17967885
NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
G
Lox
lysyl oxidase
acts_upstream_of_or_within
ISO
MGI:2657016 (PMID:28550176)
RGD
PMID:28550176
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19609448)
Ensembl RGD
PMID:19609448
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(PMID:12372254)
RGD
PMID:12372254
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:16109771)
RGD
PMID:16109771
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(PMID:9217007)
RGD
PMID:9217007
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Arid2
AT-rich interaction domain 2
acts_upstream_of_or_within
ISO
MGI:4433303 (PMID:25299188)
RGD
PMID:25299188
NCBI chr 7:127,447,192...127,565,987
Ensembl chr 7:127,447,278...127,563,512
G
Hand2
heart and neural crest derivatives expressed 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3715149|MGI:4838016 (PMID:21350214)
Ensembl RGD
PMID:21350214
GO_REF:0000107
NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
G
Lrp2
LDL receptor related protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26822476) GO_REF:0000107
UniProt RGD Ensembl
PMID:26822476
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:21311046)
RGD
PMID:21311046
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:23639442)
RGD
PMID:23639442
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:4440621 (PMID:20215345)
RGD
PMID:20215345
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179190 (PMID:18583714)
UniProt RGD
PMID:18583714
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(PMID:18093989)
RGD
PMID:18093989
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Chrd
chordin
involved_in
ISO
MGI:2157350 (PMID:17685487)
RGD
PMID:17685487
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Lox
lysyl oxidase
acts_upstream_of_or_within
ISO
MGI:2657016 (PMID:28550176)
RGD
PMID:28550176
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
G
Ngfr
nerve growth factor receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:11559852)
Ensembl RGD
PMID:11559852
GO_REF:0000107
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
G
Nkx3-1
NK3 homeobox 1
involved_in
ISO
(PMID:9142502)
RGD
PMID:9142502
NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441
G
Acvrl1
activin A receptor like type 1
involved_in
ISO
(PMID:12941632)
RGD
PMID:12941632
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(PMID:18667463)
RGD
PMID:18667463
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Dll4
delta like canonical Notch ligand 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15466159), (PMID:15466160)
Ensembl RGD
PMID:15466159 PMID:15466160
GO_REF:0000107
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
G
Eng
endoglin
involved_in
ISO
(PMID:12941632)
RGD
PMID:12941632
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9QUS4 (PMID:15107403)
RGD
PMID:15107403
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
UniProtKB:Q9WV93 (PMID:15107403)
RGD
PMID:15107403
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:15466160)
RGD
PMID:15466160
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
MGI:3522206|MGI:3522214 (PMID:15569937)
RGD
PMID:15569937
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Foxf1
forkhead box F1
involved_in
ISO
(PMID:19500772)
RGD
PMID:19500772
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Hpgd
15-hydroxyprostaglandin dehydrogenase
involved_in
ISS ISO
GO_REF:0000024 (PMID:11821873)
UniProt RGD
PMID:11821873
GO_REF:0000024
NCBI chr16:33,986,265...34,024,228
Ensembl chr16:33,986,266...34,024,228
G
Myocd
myocardin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3773718 (PMID:18188448)
Ensembl RGD
PMID:18188448
GO_REF:0000107
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Ptger4
prostaglandin E receptor 4
IMP
RGD
PMID:16303610
RGD:10003042
NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO IEA
(PMID:19500772) GO_REF:0000107
RGD Ensembl
PMID:19500772
GO_REF:0000107
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Tfap2b
transcription factor AP-2 beta
involved_in
ISS ISO
GO_REF:0000024 (PMID:18635823), (PMID:21829553)
UniProt RGD
PMID:18635823 PMID:21829553
GO_REF:0000024
NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520
G
Ptger4
prostaglandin E receptor 4
IMP
RGD
PMID:16303610
RGD:10003042
NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
G
Adgrf4
adhesion G protein-coupled receptor F4
acts_upstream_of_or_within
ISO
MGI:2182928 (PMID:28806758)
RGD
PMID:28806758
NCBI chr 9:18,272,050...18,303,219
Ensembl chr 9:18,272,050...18,303,217
G
Adgrf5
adhesion G protein-coupled receptor F5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1925499 (PMID:28806758)
Ensembl RGD
PMID:28806758
GO_REF:0000107
NCBI chr 9:17,517,596...17,624,107
Ensembl chr 9:17,520,009...17,623,968
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15070745)
Ensembl RGD
PMID:15070745
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(PMID:15073157)
RGD
PMID:15073157
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in NOT|involved_in
ISO
(PMID:12441304) (PMID:19409885)
RGD
PMID:12441304 PMID:19409885
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637|MGI:3773698|MGI:4867385 (PMID:23933587)
RGD
PMID:23933587
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857473|MGI:1857637|MGI:2687362|MGI:3773698|MGI:4867385 (PMID:23933587), (PMID:31219639)
Ensembl RGD
PMID:23933587 PMID:31219639
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Folr1
folate receptor alpha
involved_in
ISO
(PMID:17286298)
RGD
PMID:17286298
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20122914)
Ensembl RGD
PMID:20122914
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Megf8
multiple EGF-like-domains 8
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:32203821) GO_REF:0000107
RGD Ensembl
PMID:32203821
GO_REF:0000107
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
MGI:3605892 (PMID:23319608)
RGD
PMID:23319608
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(PMID:11390347)
RGD
PMID:11390347
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Efnb2
ephrin B2
acts_upstream_of_or_within
ISO
MGI:2176476|MGI:3526818 (PMID:18952909)
RGD
PMID:18952909
NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
G
Ephb4
EPH receptor B4
acts_upstream_of_or_within
ISO
MGI:2183162 (PMID:18952909)
RGD
PMID:18952909
NCBI chr12:19,326,411...19,351,667
Ensembl chr12:19,326,427...19,351,314
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
(PMID:18952909)
RGD
PMID:18952909
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Notch4
notch receptor 4
acts_upstream_of_or_within
ISO
(PMID:18952909)
RGD
PMID:18952909
NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
G
Akt3
AKT serine/threonine kinase 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:28254819)
Ensembl RGD
PMID:28254819
GO_REF:0000107
NCBI chr13:88,943,708...89,225,831
Ensembl chr13:88,946,091...89,225,708
G
Edn1
endothelin 1
involved_in
ISO
(PMID:20495147)
RGD
PMID:20495147
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Mdk
midkine
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:29233575)
UniProt Ensembl RGD
PMID:29233575
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Nfatc3
nuclear factor of activated T-cells 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:20495147)
UniProt RGD
PMID:20495147
GO_REF:0000024
NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
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Rtn4
reticulon 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:19805174)
UniProt RGD
PMID:19805174
GO_REF:0000024
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2385355 (PMID:12149478)
RGD
PMID:12149478
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(PMID:12372254)
RGD
PMID:12372254
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Jag1
jagged canonical Notch ligand 1
involved_in
ISO IEA
(PMID:9207787) GO_REF:0000107
RGD Ensembl
PMID:9207787
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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Lrp2
LDL receptor related protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26822476) GO_REF:0000107
UniProt RGD Ensembl
PMID:26822476
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
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Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:4440621 (PMID:20215345)
RGD
PMID:20215345
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
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Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO IEA
(PMID:17273977) GO_REF:0000107
RGD Ensembl
PMID:17273977
GO_REF:0000107
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
G
Nrp1
neuropilin 1
involved_in
ISO
(PMID:23639442)
RGD
PMID:23639442
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Pkd2
polycystin 2, transient receptor potential cation channel
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
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