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organophosphate biosynthetic process - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS


Term:organophosphate biosynthetic process
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Accession:GO:0090407 term browser browse the term
Definition:The chemical reactions and pathways resulting in the biosynthesis of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.


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'de novo' AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:6480832)
(PMID:5891253)
MGI PMID:5891253 PMID:6480832 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527
JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in ISO (PMID:27590927)
(PMID:6480832)
MGI PMID:6480832 PMID:27590927 NCBI chrNW_004955406:7,684,979...7,715,179
Ensembl chrNW_004955406:7,683,596...7,715,616
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (PMID:26588576)
(PMID:26144885)
MGI PMID:26144885 PMID:26588576 NCBI chrNW_004955457:704,213...729,702
Ensembl chrNW_004955457:704,213...730,134
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (PMID:2183217)
(PMID:8299947)
MGI PMID:2183217 PMID:8299947 NCBI chrNW_004955407:32,944,638...32,975,142
Ensembl chrNW_004955407:32,944,164...32,973,863
JBrowse link
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chrNW_004955447:14,558,468...14,571,081
Ensembl chrNW_004955447:14,558,468...14,574,052
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chrNW_004955467:8,640,044...8,660,950
Ensembl chrNW_004955467:8,640,044...8,660,979
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (PMID:6327016) MGI PMID:6327016 NCBI chrNW_004955447:14,552,846...14,607,416
Ensembl chrNW_004955447:14,574,407...14,607,416
JBrowse link
'de novo' GDP-L-fucose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfus GDP-L-fucose synthase involved_in ISO (PMID:9525924)
(PMID:12186857)
UniProt
MGI
PMID:9525924 PMID:12186857 NCBI chrNW_004955454:2,313,172...2,317,829
Ensembl chrNW_004955454:2,313,172...2,317,829
JBrowse link
G Gmds GDP-mannose 4,6-dehydratase involved_in ISO (PMID:9525924) UniProt PMID:9525924 NCBI chrNW_004955465:11,133,513...11,562,562
Ensembl chrNW_004955465:11,145,837...11,563,352
JBrowse link
G Slc35c1 solute carrier family 35 member C1 involved_in ISO (PMID:17276979) MGI PMID:17276979 NCBI chrNW_004955422:2,130,561...2,139,145
Ensembl chrNW_004955422:2,130,453...2,139,145
JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:6480832) MGI PMID:6480832 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (PMID:26144885)
(PMID:26588576)
RGD
MGI
PMID:9332377 PMID:26144885 PMID:26588576 RGD:70804 NCBI chrNW_004955457:704,213...729,702
Ensembl chrNW_004955457:704,213...730,134
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (PMID:2183217)
(PMID:8299947)
MGI PMID:2183217 PMID:8299947 NCBI chrNW_004955407:32,944,638...32,975,142
Ensembl chrNW_004955407:32,944,164...32,973,863
JBrowse link
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chrNW_004955447:14,558,468...14,571,081
Ensembl chrNW_004955447:14,558,468...14,574,052
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chrNW_004955467:8,640,044...8,660,950
Ensembl chrNW_004955467:8,640,044...8,660,979
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (PMID:6327016) MGI PMID:6327016 NCBI chrNW_004955447:14,552,846...14,607,416
Ensembl chrNW_004955447:14,574,407...14,607,416
JBrowse link
'de novo' NAD biosynthetic process from L-tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nadsyn1 NAD synthetase 1 involved_in ISO (PMID:31883644) UniProt PMID:31883644 NCBI chrNW_004955422:15,067,711...15,113,942
Ensembl chrNW_004955422:15,066,708...15,114,049
JBrowse link
'de novo' UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO (PMID:25678555)
(PMID:33771897)
MGI PMID:25678555 PMID:33771897 NCBI chrNW_004955469:9,203,433...9,227,526
Ensembl chrNW_004955469:9,203,434...9,227,865
JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in ISO (PMID:30449682), (PMID:6249586) MGI PMID:6249586 PMID:30449682 NCBI chrNW_004955484:4,699,743...4,713,466
Ensembl chrNW_004955484:4,699,722...4,713,466
JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO (PMID:2419341)
(PMID:6154574)
MGI PMID:2419341 PMID:6154574 NCBI chrNW_004955427:23,825,529...23,841,427
Ensembl chrNW_004955427:23,825,523...23,841,152
JBrowse link
'de novo' XMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:6480832) MGI PMID:6480832 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (PMID:26588576)
(PMID:26144885)
MGI PMID:26144885 PMID:26588576 NCBI chrNW_004955457:704,213...729,702
Ensembl chrNW_004955457:704,213...730,134
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (PMID:8299947)
(PMID:2183217)
MGI PMID:2183217 PMID:8299947 NCBI chrNW_004955407:32,944,638...32,975,142
Ensembl chrNW_004955407:32,944,164...32,973,863
JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 involved_in ISO (PMID:12944494) MGI PMID:12944494 NCBI chrNW_004955479:9,388,241...9,406,717
Ensembl chrNW_004955479:9,388,108...9,406,764
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (PMID:12944494) MGI PMID:12944494 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chrNW_004955447:14,558,468...14,571,081
Ensembl chrNW_004955447:14,558,468...14,574,052
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chrNW_004955467:8,640,044...8,660,950
Ensembl chrNW_004955467:8,640,044...8,660,979
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (PMID:6327016) MGI PMID:6327016 NCBI chrNW_004955447:14,552,846...14,607,416
Ensembl chrNW_004955447:14,574,407...14,607,416
JBrowse link
1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004955429:6,231,135...6,399,672
Ensembl chrNW_004955429:6,336,355...6,399,672
JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004955451:13,842,814...13,856,301
Ensembl chrNW_004955451:13,842,814...13,856,302
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004955458:5,315,083...5,327,617
Ensembl chrNW_004955458:5,315,376...5,327,617
JBrowse link
2'-deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (PMID:12578384)
(PMID:16376858)
ComplexPortal PMID:12578384 PMID:16376858 NCBI chrNW_004955414:19,850,523...19,904,879
Ensembl chrNW_004955414:19,850,530...19,905,266
JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in ISO (PMID:12578384)
(PMID:16376858)
ComplexPortal PMID:12578384 PMID:16376858 NCBI chrNW_004955487:5,477,097...5,481,422
Ensembl chrNW_004955487:5,476,954...5,483,049
JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in ISO (PMID:16376858) ComplexPortal PMID:16376858 NCBI chrNW_004955417:26,949,686...26,976,976
Ensembl chrNW_004955417:26,949,686...26,976,726
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14747722), (PMID:23207770)
(PMID:12414806)
(PMID:7493984), (PMID:9545271)
UniProt
MGI
PMID:7493984 PMID:9545271 PMID:12414806 PMID:14747722 PMID:23207770 NCBI chrNW_004955496:1,993,423...2,057,384
Ensembl chrNW_004955496:1,993,172...2,059,174
JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 involved_in ISO (PMID:23824674)
(PMID:10559207)
(PMID:9671738)
UniProt
MGI
PMID:9671738 PMID:10559207 PMID:23824674 NCBI chrNW_004955425:5,186,232...5,259,080
Ensembl chrNW_004955425:5,187,952...5,258,955
JBrowse link
5-phosphoribose 1-diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prps1 phosphoribosyl pyrophosphate synthetase 1 involved_in ISO (PMID:26175007) RGD
MGI
PMID:9366267 PMID:26175007 RGD:5134981 NCBI chrNW_004955490:8,303,775...8,330,713
Ensembl chrNW_004955490:8,303,775...8,330,713
JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 involved_in ISO (PMID:26175007)
(PMID:24855946)
RGD
MGI
PMID:9366267 PMID:24855946 PMID:26175007 RGD:5134981 NCBI chrNW_004955544:480,587...512,019
Ensembl chrNW_004955544:478,954...512,614
JBrowse link
G Pygl glycogen phosphorylase L ISO RGD PMID:15571236 RGD:1599376 NCBI chrNW_004955409:11,970,112...12,007,102
Ensembl chrNW_004955409:11,970,112...12,007,102
JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
G Acly ATP citrate lyase involved_in ISO (PMID:1371749)
(PMID:39881208)
BHF-UCL
UniProt
PMID:1371749 PMID:39881208 NCBI chrNW_004955451:16,058,916...16,091,831
Ensembl chrNW_004955451:16,058,727...16,092,589
JBrowse link
G Acss1 acyl-CoA synthetase short chain family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16788062)
(PMID:11150295)
UniProt
MGI
PMID:11150295 PMID:16788062 NCBI chrNW_004955415:31,117,542...31,154,654
Ensembl chrNW_004955415:31,117,303...31,154,654
JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 acts_upstream_of_or_within ISO (PMID:11150295) MGI PMID:11150295 NCBI chrNW_004955422:26,450,899...26,500,336
Ensembl chrNW_004955422:26,451,598...26,500,546
JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO (PMID:30672040) UniProt PMID:30672040 NCBI chrNW_004955407:42,857,297...42,961,831
Ensembl chrNW_004955407:42,857,344...42,959,265
JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:29754768) UniProt PMID:29754768 NCBI chrNW_004955537:2,080,865...2,084,199
Ensembl chrNW_004955537:2,080,865...2,085,003
JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004955419:799,415...807,138
Ensembl chrNW_004955419:799,410...811,029
JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chrNW_004955452:11,254,853...11,275,587 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295 PMID:5123889 RGD:5490208 RGD:5490216 NCBI chrNW_004955434:8,998,357...9,010,468
Ensembl chrNW_004955434:9,000,158...9,011,250
JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:11428554) UniProt
RGD
PMID:3759987 PMID:11428554 RGD:5135303 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527
JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) UniProt PMID:15786719 NCBI chrNW_004955538:3,179,299...3,196,251
Ensembl chrNW_004955538:3,179,299...3,196,251
JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:2004783)
(PMID:8308018)
UniProt
MGI
PMID:2004783 PMID:8308018 NCBI chrNW_004955406:7,684,979...7,715,179
Ensembl chrNW_004955406:7,683,596...7,715,616
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004955490:8,303,775...8,330,713
Ensembl chrNW_004955490:8,303,775...8,330,713
JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004955544:480,587...512,019
Ensembl chrNW_004955544:478,954...512,614
JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chrNW_004955434:8,998,357...9,010,468
Ensembl chrNW_004955434:9,000,158...9,011,250
JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (PMID:8064675) MGI PMID:8064675 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Adk adenosine kinase involved_in ISO (PMID:6978152), (PMID:819300) MGI PMID:819300 PMID:6978152 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079
JBrowse link
G Adsl adenylosuccinate lyase involved_in ISO (PMID:25681585) MGI PMID:25681585 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527
JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (PMID:25681585) MGI PMID:25681585 NCBI chrNW_004955538:3,179,299...3,196,251
Ensembl chrNW_004955538:3,179,299...3,196,251
JBrowse link
G Aprt adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within
ISO (PMID:718989)
(PMID:8864750)
(PMID:9776749)
MGI PMID:718989 PMID:8864750 PMID:9776749 NCBI chrNW_004955541:2,687,938...2,690,906
Ensembl chrNW_004955541:2,687,938...2,690,906
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:10037486), (PMID:25681585), (PMID:8064675) MGI PMID:8064675 PMID:10037486 PMID:25681585 NCBI chrNW_004955473:462,940...510,006 JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004955402:31,652,226...31,662,114
Ensembl chrNW_004955402:31,651,960...31,662,762
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:17510399), (PMID:21106936) UniProt PMID:17510399 PMID:21106936 NCBI chrNW_004955458:4,188,167...4,195,575
Ensembl chrNW_004955458:4,186,461...4,195,494
JBrowse link
G Fam3a FAM3 metabolism regulating signaling molecule A acts_upstream_of_or_within ISO (PMID:31944392) MGI PMID:31944392 NCBI chrNW_004955580:1,025,481...1,036,752
Ensembl chrNW_004955580:1,029,553...1,036,849
JBrowse link
G Letmd1 LETM1 domain containing 1 acts_upstream_of_or_within ISO (PMID:31980577) MGI PMID:31980577 NCBI chrNW_004955547:1,574,210...1,586,432
Ensembl chrNW_004955547:1,574,265...1,582,786
JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:24287405) MGI PMID:24287405 NCBI chrNW_004955425:3,718,291...3,755,942
Ensembl chrNW_004955425:3,718,206...3,756,142
JBrowse link
G LOC102019456 cytochrome c oxidase assembly protein COX11, mitochondrial involved_in ISO (PMID:36030551) UniProt PMID:36030551 NCBI chrNW_004955451:7,635,704...7,642,724
Ensembl chrNW_004955451:7,635,704...7,642,724
JBrowse link
G LOC102020557 L-lactate dehydrogenase C chain acts_upstream_of_or_within ISO (PMID:18367675) MGI PMID:18367675 NCBI chrNW_004955414:33,109,535...33,138,756
Ensembl chrNW_004955414:33,110,120...33,138,756
JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chrNW_004955432:12,685,253...12,788,307
Ensembl chrNW_004955432:12,684,596...12,826,667
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO RGD PMID:14985420 RGD:2312640 NCBI chrNW_004955456:6,833,992...6,930,990
Ensembl chrNW_004955456:6,841,637...6,930,990
JBrowse link
G Adcy10 adenylate cyclase 10 involved_in ISO (PMID:12609998), (PMID:15659711) RGD
UniProt
PMID:7225326 PMID:9874775 PMID:12609998 PMID:15659711 PMID:16627466 More... RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chrNW_004955462:9,196,984...9,278,850
Ensembl chrNW_004955462:9,207,314...9,278,621
JBrowse link
G Adcy2 adenylate cyclase 2 involved_in ISO PMID:10427002
PMID:18164588
RGD
UniProt
BHF-UCL
PMID:10427002 PMID:11738086 PMID:12711600 PMID:18164588 RGD:10400857 RGD:2312641 RGD:2312674 RGD:8553431 NCBI chrNW_004955504:4,990,634...5,376,990
Ensembl chrNW_004955504:5,004,903...5,376,328
JBrowse link
G Adcy3 adenylate cyclase 3 involved_in ISO (PMID:11055432)
PMID:24363043
RGD
UniProt
PMID:11055432 PMID:12711600 PMID:24363043 RGD:10400870 RGD:2312674 NCBI chrNW_004955469:6,933,208...7,026,179
Ensembl chrNW_004955469:6,929,092...7,026,758
JBrowse link
G Adcy4 adenylate cyclase 4 involved_in ISO PMID:8900209 RGD
BHF-UCL
PMID:8900209 PMID:11738086 PMID:12711600 RGD:2312641 RGD:2312674 RGD:8554340 NCBI chrNW_004955409:35,966,529...35,982,839
Ensembl chrNW_004955409:35,966,332...35,982,218
JBrowse link
G Adcy6 adenylate cyclase 6 involved_in ISO (PMID:20466003)
(PMID:8119955)
(PMID:17916776), (PMID:18403039)
RGD
UniProt
PMID:8119955 PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 More... RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chrNW_004955500:7,635,946...7,655,579
Ensembl chrNW_004955500:7,637,089...7,651,162
JBrowse link
G Adcy7 adenylate cyclase 7 involved_in ISO (PMID:11113152), (PMID:17760784) RGD
UniProt
PMID:11113152 PMID:12711600 PMID:17760784 RGD:2312674 NCBI chrNW_004955433:8,362,957...8,428,773
Ensembl chrNW_004955433:8,362,756...8,426,997
JBrowse link
G Adcy8 adenylate cyclase 8 ISO RGD PMID:16741924 PMID:19305019 PMID:19444869 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chrNW_004955461:5,497,708...5,725,574
Ensembl chrNW_004955461:5,497,628...5,725,574
JBrowse link
G Adcy9 adenylate cyclase 9 involved_in
acts_upstream_of_or_within
ISO (PMID:10987815), (PMID:9628827)
(PMID:7575502), (PMID:8662814)
UniProt
MGI
RGD
PMID:7575502 PMID:8662814 PMID:9628827 PMID:10987815 PMID:19444869 RGD:2312785 NCBI chrNW_004955442:13,310,289...13,433,816
Ensembl chrNW_004955442:13,310,289...13,434,971
JBrowse link
G Cartpt CART prepropeptide ISO RGD PMID:23250745 RGD:597830034 NCBI chrNW_004955575:551,991...555,118
Ensembl chrNW_004955575:551,991...555,149
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:12869647 RGD:596992334 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:11278900 RGD:10003101 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:11278900 RGD:10003101 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822
JBrowse link
carbamoyl phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cps1 carbamoyl-phosphate synthase 1 involved_in ISO (PMID:21120950), (PMID:7416778) BHF-UCL PMID:7416778 PMID:21120950 NCBI chrNW_004955457:4,848,116...4,961,384
Ensembl chrNW_004955457:4,844,152...4,961,246
JBrowse link
cardiolipin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crls1 cardiolipin synthase 1 involved_in ISO (PMID:35147173)
(PMID:16678169), (PMID:16716149)
UniProt PMID:16678169 PMID:16716149 PMID:35147173 NCBI chrNW_004955415:16,389,379...16,410,486
Ensembl chrNW_004955415:16,389,389...16,411,238
JBrowse link
G Ptpmt1 protein tyrosine phosphatase mitochondrial 1 involved_in ISO (PMID:21641550) UniProt PMID:21641550 NCBI chrNW_004955422:723,236...724,761 JBrowse link
CDP-choline pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in ISO (PMID:12842190)
PMID:19783652
PMID:8381041
PMID:8185307
(PMID:10480912)
UniProt PMID:8185307 PMID:8381041 PMID:10480912 PMID:12842190 PMID:19783652 RGD:39458015 RGD:729578 RGD:8553740 NCBI chrNW_004955420:12,464,857...12,513,017
Ensembl chrNW_004955420:12,464,857...12,500,574
JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in ISO (PMID:10480912)
(PMID:12842190)
UniProt PMID:10480912 PMID:12842190 NCBI chrNW_004955509:4,896,208...4,990,101
Ensembl chrNW_004955509:4,896,190...4,990,149
JBrowse link
CDP-diacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cds1 CDP-diacylglycerol synthase 1 acts_upstream_of_or_within
involved_in
ISO (PMID:8863531)
(PMID:25375833), (PMID:9407135)
MGI
UniProt
PMID:8863531 PMID:9407135 PMID:25375833 NCBI chrNW_004955474:5,057,833...5,104,235
Ensembl chrNW_004955474:5,057,833...5,104,235
JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISO (PMID:25375833) UniProt PMID:25375833 NCBI chrNW_004955415:15,762,672...15,806,454
Ensembl chrNW_004955415:15,792,239...15,806,454
JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (PMID:25667419) MGI PMID:25667419 NCBI chrNW_004955437:16,900,756...16,969,042
Ensembl chrNW_004955437:16,900,688...16,969,042
JBrowse link
G Sgms2 sphingomyelin synthase 2 acts_upstream_of_or_within ISO (PMID:25667419) MGI PMID:25667419 NCBI chrNW_004955496:1,909,347...1,955,004
Ensembl chrNW_004955496:1,905,517...1,947,009
JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23505436)
(PMID:16614755)
UniProt
MGI
PMID:16614755 PMID:23505436 NCBI chrNW_004955471:11,367,318...11,422,199
Ensembl chrNW_004955471:11,367,282...11,424,273
JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 involved_in ISO (PMID:23505436) UniProt PMID:23505436 NCBI chrNW_004955471:11,303,478...11,349,512
Ensembl chrNW_004955471:11,303,242...11,351,190
JBrowse link
G Gucy2d guanylate cyclase 2D, retinal involved_in ISO (PMID:21598940) UniProt PMID:21598940 NCBI chrNW_004955467:8,938,057...8,949,684
Ensembl chrNW_004955467:8,938,057...8,949,684
JBrowse link
G Nppa natriuretic peptide A acts_upstream_of ISO (PMID:1672777) RGD
GO_Central
PMID:1672777 PMID:10559136 RGD:619660 NCBI chrNW_004955486:2,061,196...2,062,805
Ensembl chrNW_004955486:2,060,735...2,063,003
JBrowse link
G Nppb natriuretic peptide B acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004955486:2,054,775...2,056,130 JBrowse link
G Nppc natriuretic peptide C acts_upstream_of ISO (PMID:1672777)
(PMID:11259675)
GO_Central PMID:1672777 PMID:11259675 NCBI chrNW_004955453:3,884,580...3,888,494
Ensembl chrNW_004955453:3,884,560...3,888,850
JBrowse link
G Npr1 natriuretic peptide receptor 1 involved_in ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004955545:323,386...338,654
Ensembl chrNW_004955545:323,956...338,097
JBrowse link
G Npr2 natriuretic peptide receptor 2 acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004955472:506,351...523,647
Ensembl chrNW_004955472:506,351...523,316
JBrowse link
CMP-N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmas cytidine monophosphate N-acetylneuraminic acid synthetase involved_in ISO (PMID:31121216)
(PMID:30382946)
FlyBase
MGI
PMID:30382946 PMID:31121216 NCBI chrNW_004955413:17,575,469...17,596,379
Ensembl chrNW_004955413:17,575,469...17,599,859
JBrowse link
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in ISO (PMID:11929971)
(PMID:31121216)
MGI
FlyBase
PMID:11929971 PMID:31121216 NCBI chrNW_004955472:56,623...92,553
Ensembl chrNW_004955472:45,926...97,082
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in ISO (PMID:11929971)
(PMID:31121216)
MGI
FlyBase
PMID:11929971 PMID:31121216 NCBI chrNW_004955415:31,453,393...31,460,147
Ensembl chrNW_004955415:31,453,393...31,460,386
JBrowse link
G Nans N-acetylneuraminate synthase involved_in ISO (PMID:11929971)
(PMID:31121216)
MGI
FlyBase
PMID:11929971 PMID:31121216 NCBI chrNW_004955419:27,424,648...27,449,058
Ensembl chrNW_004955419:27,424,674...27,448,952
JBrowse link
G Slc35a1 solute carrier family 35 member A1 involved_in ISO (PMID:32303557) MGI PMID:32303557 NCBI chrNW_004955411:14,443,957...14,469,590
Ensembl chrNW_004955411:14,443,839...14,468,246
JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004955486:6,188,102...6,258,230
Ensembl chrNW_004955486:6,188,102...6,259,110
JBrowse link
G Coasy Coenzyme A synthase involved_in
acts_upstream_of_or_within
ISO (PMID:11923312)
(PMID:11980892)
UniProt
MGI
PMID:11923312 PMID:11980892 NCBI chrNW_004955451:16,457,707...16,460,631
Ensembl chrNW_004955451:16,457,707...16,460,631
JBrowse link
G Pank1 pantothenate kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10625688)
(PMID:22815849)
(PMID:20559429), (PMID:22815849)
MGI PMID:10625688 PMID:20559429 PMID:22815849 NCBI chrNW_004955425:3,384,023...3,433,808
Ensembl chrNW_004955425:3,384,200...3,432,431
JBrowse link
G Pank2 pantothenate kinase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:24316510)
(PMID:22815849)
MGI PMID:22815849 PMID:24316510 NCBI chrNW_004955415:14,722,951...14,752,493
Ensembl chrNW_004955415:14,723,087...14,751,423
JBrowse link
G Pank3 pantothenate kinase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:20797618)
(PMID:16040613)
(PMID:30927326)
UniProt
MGI
PMID:16040613 PMID:20797618 PMID:30927326 NCBI chrNW_004955408:21,630,849...21,643,432
Ensembl chrNW_004955408:21,630,849...21,652,999
JBrowse link
G Ppcdc phosphopantothenoylcysteine decarboxylase involved_in ISO (PMID:11923312) UniProt PMID:11923312 NCBI chrNW_004955450:2,971,874...2,985,034
Ensembl chrNW_004955450:2,971,874...2,985,191
JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:11923312)
(PMID:29754768)
UniProt PMID:11923312 PMID:29754768 NCBI chrNW_004955537:2,080,865...2,084,199
Ensembl chrNW_004955537:2,080,865...2,085,003
JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in ISO (PMID:16179339)
(PMID:24870241)
UniProt PMID:16179339 PMID:24870241 NCBI chrNW_004955537:773,664...811,084
Ensembl chrNW_004955537:774,002...813,254
JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uck1 uridine-cytidine kinase 1 involved_in ISO (PMID:11306702) UniProt PMID:11306702 NCBI chrNW_004955513:1,203,934...1,208,720
Ensembl chrNW_004955513:1,203,934...1,208,724
JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in ISO (PMID:11306702) UniProt PMID:11306702 NCBI chrNW_004955462:10,815,496...10,925,364
Ensembl chrNW_004955462:10,815,389...10,886,227
JBrowse link
D-glucuronate catabolic process to D-xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in ISO (PMID:38160) MGI PMID:38160 NCBI chrNW_004955464:12,715,238...12,729,034
Ensembl chrNW_004955464:12,714,717...12,729,662
JBrowse link
G Cryl1 crystallin lambda 1 involved_in ISO (PMID:38160) MGI PMID:38160 NCBI chrNW_004955497:1,183,707...1,316,720
Ensembl chrNW_004955497:1,182,115...1,292,721
JBrowse link
G Sord sorbitol dehydrogenase involved_in ISO (PMID:38160) MGI PMID:38160 NCBI chrNW_004955409:8,305,819...8,333,733
Ensembl chrNW_004955409:8,303,602...8,333,869
JBrowse link
dAMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in ISO (PMID:2835956) MGI PMID:2835956 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079
JBrowse link
G Dck deoxycytidine kinase involved_in ISO (PMID:8748457) MGI PMID:8748457 NCBI chrNW_004955447:2,031,851...2,067,005
Ensembl chrNW_004955447:2,031,258...2,067,210
JBrowse link
G Dguok deoxyguanosine kinase involved_in ISO (PMID:19221117) MGI PMID:19221117 NCBI chrNW_004955424:11,739,904...11,773,884
Ensembl chrNW_004955424:11,738,859...11,773,902
JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase acts_upstream_of_or_within ISO (PMID:12163459) MGI PMID:12163459 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079
JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (PMID:19176520) UniProt PMID:19176520 NCBI chrNW_004955414:19,850,523...19,904,879
Ensembl chrNW_004955414:19,850,530...19,905,266
JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in ISO (PMID:19176520) UniProt PMID:19176520 NCBI chrNW_004955487:5,477,097...5,481,422
Ensembl chrNW_004955487:5,476,954...5,483,049
JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B acts_upstream_of_or_within ISO (PMID:11517226) MGI PMID:11517226 NCBI chrNW_004955417:26,949,686...26,976,976
Ensembl chrNW_004955417:26,949,686...26,976,726
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in ISO (PMID:31201273) UniProt
RGD
PMID:4307347 PMID:31201273 RGD:5147877 NCBI chrNW_004955581:299,010...305,032
Ensembl chrNW_004955581:299,280...305,032
JBrowse link
diadenosine tetraphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gars1 glycyl-tRNA synthetase 1 involved_in ISO (PMID:19710017) UniProt PMID:19710017 NCBI chrNW_004955410:31,778,654...31,819,287
Ensembl chrNW_004955410:31,779,543...31,819,113
JBrowse link
G Kars1 lysyl-tRNA synthetase 1 involved_in ISO (PMID:19524539)
(PMID:23159739)
CAFA
UniProt
RGD
PMID:3988754 PMID:6626505 PMID:19524539 PMID:23159739 RGD:12793003 RGD:2303395 RGD:2303396 NCBI chrNW_004955484:1,924,523...1,939,777
Ensembl chrNW_004955484:1,924,523...1,940,552
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO PMID:19524539 CAFA PMID:19524539 RGD:12793003 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490), (PMID:32817466), (PMID:33077723) UniProt PMID:28842490 PMID:32817466 PMID:33077723 NCBI chrNW_004955452:5,811,053...5,844,992
Ensembl chrNW_004955452:5,811,053...5,845,580
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490), (PMID:32817466) ComplexPortal PMID:28842490 PMID:32817466 NCBI chrNW_004955436:825,387...850,558
Ensembl chrNW_004955436:825,387...850,558
JBrowse link
dolichyl monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in ISO (PMID:22242004)
(PMID:12213788), (PMID:16923818)
UniProt PMID:12213788 PMID:16923818 PMID:22242004 NCBI chrNW_004955570:1,310,894...1,312,952
Ensembl chrNW_004955570:1,311,056...1,312,672
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004955487:2,010,126...2,024,804
Ensembl chrNW_004955487:2,010,228...2,029,175
JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within
involved_in
ISO (PMID:8845311)
(PMID:12614151)
RGD
MGI
UniProt
PMID:220041 PMID:8845311 PMID:12614151 RGD:5133687 NCBI chrNW_004955542:155,741...163,759
Ensembl chrNW_004955542:155,742...163,759
JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase involved_in ISO (PMID:10952785), (PMID:15322254) MGI PMID:10952785 PMID:15322254 NCBI chrNW_004955409:5,574,810...5,584,135
Ensembl chrNW_004955409:5,574,694...5,584,134
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:19513116) BHF-UCL PMID:19513116 NCBI chrNW_004955478:10,972,791...11,001,535
Ensembl chrNW_004955478:10,978,139...11,001,202
JBrowse link
G Tyms thymidylate synthetase involved_in ISO (PMID:11278511), (PMID:15093541), (PMID:8845352)
(PMID:22057276)
CAFA
MGI
RGD
PMID:8845352 PMID:9894005 PMID:11278511 PMID:15093541 PMID:22057276 RGD:1545055 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631
JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtymk deoxythymidylate kinase ISO RGD PMID:220041 RGD:5133687 NCBI chrNW_004955542:155,741...163,759
Ensembl chrNW_004955542:155,742...163,759
JBrowse link
G Tbpl1 TATA-box binding protein like 1 acts_upstream_of_or_within ISO (PMID:11861477) MGI PMID:11861477 NCBI chrNW_004955439:2,539,465...2,548,351
Ensembl chrNW_004955439:2,539,486...2,563,720
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004955487:2,010,126...2,024,804
Ensembl chrNW_004955487:2,010,228...2,029,175
JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase ISO RGD PMID:1315924 PMID:3032103 RGD:2300191 RGD:2301218 NCBI chrNW_004955409:5,574,810...5,584,135
Ensembl chrNW_004955409:5,574,694...5,584,134
JBrowse link
FAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flad1 flavin adenine dinucleotide synthetase 1 involved_in ISO (PMID:20060505) FlyBase PMID:20060505 NCBI chrNW_004955545:1,487,929...1,495,808
Ensembl chrNW_004955545:1,487,818...1,497,839
JBrowse link
farnesyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase ISO RGD PMID:8188698 RGD:2316305 NCBI chrNW_004955545:1,757,090...1,765,028
Ensembl chrNW_004955545:1,757,418...1,765,028
JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004955415:31,952,400...31,958,067
Ensembl chrNW_004955415:31,952,580...31,961,615
JBrowse link
flavin adenine dinucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flad1 flavin adenine dinucleotide synthetase 1 involved_in ISO (PMID:28402850) MGI PMID:28402850 NCBI chrNW_004955545:1,487,929...1,495,808
Ensembl chrNW_004955545:1,487,818...1,497,839
JBrowse link
G Rfk riboflavin kinase involved_in ISO (PMID:24272050) MGI PMID:24272050 NCBI chrNW_004955512:2,889,265...2,898,195
Ensembl chrNW_004955512:2,890,106...2,898,195
JBrowse link
G Slc52a2 solute carrier family 52 member 2 involved_in ISO (PMID:23911957)
(PMID:26791833)
MGI PMID:23911957 PMID:26791833 NCBI chrNW_004955454:2,944,169...2,982,203
Ensembl chrNW_004955454:2,979,889...2,982,203
JBrowse link
G Slc52a3 solute carrier family 52 member 3 involved_in ISO (PMID:33116204) MGI PMID:33116204 NCBI chrNW_004955596:48,463...60,239
Ensembl chrNW_004955596:47,108...60,239
JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004955581:299,010...305,032
Ensembl chrNW_004955581:299,280...305,032
JBrowse link
GDP-D-mannose biosynthetic process from fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpi mannose phosphate isomerase involved_in ISO (PMID:9525984) FlyBase PMID:9525984 NCBI chrNW_004955450:3,061,079...3,071,202
Ensembl chrNW_004955450:3,061,079...3,067,585
JBrowse link
G Pmm2 phosphomannomutase 2 involved_in ISO (PMID:9525984) FlyBase PMID:9525984 NCBI chrNW_004955442:9,390,789...9,411,722
Ensembl chrNW_004955442:9,389,443...9,411,719
JBrowse link
GDP-L-fucose salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcsk fucose kinase involved_in ISO (PMID:30503518)
(PMID:14686921)
UniProt
MGI
PMID:14686921 PMID:30503518 NCBI chrNW_004955484:3,259,165...3,278,621
Ensembl chrNW_004955484:3,263,795...3,278,078
JBrowse link
G Fpgt fucose-1-phosphate guanylyltransferase involved_in ISO (PMID:14686921) MGI PMID:14686921 NCBI chrNW_004955423:18,430,520...18,438,760
Ensembl chrNW_004955423:18,431,717...18,439,673
JBrowse link
G Fuom fucose mutarotase involved_in ISO (PMID:17602138) MGI PMID:17602138 NCBI chrNW_004955477:11,004,871...11,008,479
Ensembl chrNW_004955477:11,002,591...11,008,478
JBrowse link
G Slc35c1 solute carrier family 35 member C1 involved_in ISO (PMID:17276979) MGI PMID:17276979 NCBI chrNW_004955422:2,130,561...2,139,145
Ensembl chrNW_004955422:2,130,453...2,139,145
JBrowse link
GDP-mannose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmppa GDP-mannose pyrophosphorylase A acts_upstream_of_or_within ISO (PMID:33755596) MGI PMID:33755596 NCBI chrNW_004955453:13,967,118...13,974,351
Ensembl chrNW_004955453:13,965,174...13,974,789
JBrowse link
G Gmppb GDP-mannose pyrophosphorylase B involved_in ISO (PMID:38419795)
(PMID:26310427)
MGI
UniProt
PMID:26310427 PMID:38419795 NCBI chrNW_004955532:1,622,605...1,624,900
Ensembl chrNW_004955532:1,622,605...1,624,900
JBrowse link
G Mpi mannose phosphate isomerase involved_in ISO (PMID:24218558) MGI PMID:24218558 NCBI chrNW_004955450:3,061,079...3,071,202
Ensembl chrNW_004955450:3,061,079...3,067,585
JBrowse link
G Pmm2 phosphomannomutase 2 involved_in ISO (PMID:27053713) MGI PMID:27053713 NCBI chrNW_004955442:9,390,789...9,411,722
Ensembl chrNW_004955442:9,389,443...9,411,719
JBrowse link
GDP-mannose biosynthetic process from mannose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmppb GDP-mannose pyrophosphorylase B involved_in ISO (PMID:38419795) MGI PMID:38419795 NCBI chrNW_004955532:1,622,605...1,624,900
Ensembl chrNW_004955532:1,622,605...1,624,900
JBrowse link
G Hk1 hexokinase 1 involved_in ISO (PMID:21273394) MGI PMID:21273394 NCBI chrNW_004955437:21,733,314...21,824,303
Ensembl chrNW_004955437:21,731,584...21,816,324
JBrowse link
G Pmm2 phosphomannomutase 2 involved_in ISO (PMID:27053713)
(PMID:9525984)
MGI
FlyBase
PMID:9525984 PMID:27053713 NCBI chrNW_004955442:9,390,789...9,411,722
Ensembl chrNW_004955442:9,389,443...9,411,719
JBrowse link
glyceraldehyde-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in ISO (PMID:11792850) MGI PMID:11792850 NCBI chrNW_004955445:1,909,012...1,914,032
Ensembl chrNW_004955445:1,908,946...1,915,002
JBrowse link
G Slc25a10 solute carrier family 25 member 10 involved_in ISO (PMID:19825180) MGI PMID:19825180 NCBI chrNW_004955506:1,389,798...1,396,670
Ensembl chrNW_004955506:1,385,788...1,397,015
JBrowse link
G Tkt transketolase involved_in ISO (PMID:9611778) UniProt PMID:9611778 NCBI chrNW_004955430:3,178,830...3,193,241
Ensembl chrNW_004955430:3,178,830...3,193,345
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in ISO (PMID:18562316) UniProt PMID:18562316 NCBI chrNW_004955413:4,467,615...4,471,594
Ensembl chrNW_004955413:4,467,566...4,471,177
JBrowse link
glycerol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gk glycerol kinase involved_in ISO (PMID:8651297)
(PMID:15845384), (PMID:37021775)
BHF-UCL
UniProt
PMID:8651297 PMID:15845384 PMID:37021775 NCBI chrNW_004955531:106,761...183,347 JBrowse link
G Gk5 glycerol kinase 5 involved_in ISO (PMID:28607088) UniProt PMID:28607088 NCBI chrNW_004955508:3,596,482...3,637,582
Ensembl chrNW_004955508:3,596,480...3,637,576
JBrowse link
glycerophospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO (PMID:15870270) MGI PMID:15870270 NCBI chrNW_004955409:37,318,597...37,329,068
Ensembl chrNW_004955409:37,318,597...37,329,155
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:17482562) UniProt PMID:17482562 NCBI chrNW_004955493:6,696,520...6,707,849
Ensembl chrNW_004955493:6,696,241...6,707,849
JBrowse link
G Far1 fatty acyl-CoA reductase 1 involved_in ISO (PMID:20071337) UniProt PMID:20071337 NCBI chrNW_004955414:28,938,535...28,996,622 JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:6480832) MGI PMID:6480832 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (PMID:26588576)
(PMID:26144885)
MGI PMID:26144885 PMID:26588576 NCBI chrNW_004955457:704,213...729,702
Ensembl chrNW_004955457:704,213...730,134
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (PMID:8299947)
(PMID:2183217)
MGI PMID:2183217 PMID:8299947 NCBI chrNW_004955407:32,944,638...32,975,142
Ensembl chrNW_004955407:32,944,164...32,973,863
JBrowse link
G Gmps guanine monophosphate synthase acts_upstream_of_or_within
involved_in
ISO (PMID:8089153)
(PMID:240826)
MGI
RGD
PMID:240826 PMID:3436958 PMID:8089153 RGD:1599004 NCBI chrNW_004955448:6,931,891...6,984,662
Ensembl chrNW_004955448:6,932,926...6,984,662
JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 involved_in ISO (PMID:12944494) MGI PMID:12944494 NCBI chrNW_004955479:9,388,241...9,406,717
Ensembl chrNW_004955479:9,388,108...9,406,764
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (PMID:12944494)
(PMID:1671845)
MGI PMID:1671845 PMID:12944494 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chrNW_004955447:14,558,468...14,571,081
Ensembl chrNW_004955447:14,558,468...14,574,052
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chrNW_004955467:8,640,044...8,660,950
Ensembl chrNW_004955467:8,640,044...8,660,979
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (PMID:6327016) MGI PMID:6327016 NCBI chrNW_004955447:14,552,846...14,607,416
Ensembl chrNW_004955447:14,574,407...14,607,416
JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (PMID:718989) MGI PMID:718989 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Adk adenosine kinase involved_in ISO (PMID:4348168), (PMID:718989) MGI PMID:718989 PMID:4348168 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079
JBrowse link
G Ampd1 adenosine monophosphate deaminase 1 involved_in ISO (PMID:29079593) MGI PMID:29079593 NCBI chrNW_004955435:17,962,487...17,991,625
Ensembl chrNW_004955435:17,962,514...17,991,556
JBrowse link
G Aprt adenine phosphoribosyltransferase involved_in ISO (PMID:718989) MGI PMID:718989 NCBI chrNW_004955541:2,687,938...2,690,906
Ensembl chrNW_004955541:2,687,938...2,690,906
JBrowse link
G Gmps guanine monophosphate synthase involved_in ISO PMID:6180773 MGI PMID:6180773 RGD:150521637 NCBI chrNW_004955448:6,931,891...6,984,662
Ensembl chrNW_004955448:6,932,926...6,984,662
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:4208686)
(PMID:718989)
(PMID:10037486)
MGI PMID:718989 PMID:4208686 PMID:10037486 NCBI chrNW_004955473:462,940...510,006 JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in
ISO (PMID:9535917), (PMID:9724629)
(PMID:16280320)
MGI
HGNC-UCL
PMID:9535917 PMID:9724629 PMID:16280320 NCBI chrNW_004955445:7,472,579...7,492,632
Ensembl chrNW_004955445:7,472,562...7,495,774
JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in
acts_upstream_of_or_within
ISO (PMID:16162815)
PMID:9724629
UniProt
MGI
PMID:9724629 PMID:16162815 RGD:69827 NCBI chrNW_004955419:740,815...743,036
Ensembl chrNW_004955419:740,815...743,036
JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004955402:1,167,711...1,182,410
Ensembl chrNW_004955402:1,172,704...1,181,908
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 ISO RGD PMID:14734546 RGD:1303970 NCBI chrNW_004955403:3,527,398...3,582,004
Ensembl chrNW_004955403:3,527,138...3,582,004
JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in ISO (PMID:29374258)
(PMID:23561846)
PMID:16407401
UniProt PMID:16407401 PMID:23561846 PMID:29374258 RGD:596936197 RGD:8553507 NCBI chrNW_004955414:19,607,180...19,630,010
Ensembl chrNW_004955414:19,607,180...19,630,010
JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004955451:14,418,923...14,428,032
Ensembl chrNW_004955451:14,418,923...14,428,039
JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004955419:24,334,402...24,344,390
Ensembl chrNW_004955419:24,334,402...24,344,390
JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis class A acts_upstream_of_or_within ISO (PMID:8611683) MGI PMID:8611683 NCBI chrNW_004955519:2,852,605...2,865,848
Ensembl chrNW_004955519:2,852,555...2,867,600
JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis class B involved_in ISO (PMID:8861954) UniProt PMID:8861954 NCBI chrNW_004955409:562,575...577,082
Ensembl chrNW_004955409:562,688...577,082
JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis class C involved_in ISO (PMID:16162815)
(PMID:27694521)
UniProt PMID:16162815 PMID:27694521 NCBI chrNW_004955406:12,891,187...12,893,935
Ensembl chrNW_004955406:12,891,187...12,893,935
JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis class F involved_in ISO (PMID:10781593)
(PMID:33386993)
UniProt PMID:10781593 PMID:33386993 NCBI chrNW_004955441:13,492,334...13,525,581 JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) acts_upstream_of_or_within ISO (PMID:15632136) MGI PMID:15632136 NCBI chrNW_004955514:119,804...152,603
Ensembl chrNW_004955514:120,287...151,827
JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis class H involved_in ISO (PMID:16162815) UniProt PMID:16162815 NCBI chrNW_004955466:2,601,368...2,616,255
Ensembl chrNW_004955466:2,601,394...2,616,255
JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis class L involved_in ISO (PMID:10085243) RGD
UniProt
PMID:9188481 PMID:10085243 RGD:401901217 RGD:729509 NCBI chrNW_004955467:1,566,494...1,645,158 JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis class M involved_in ISO PMID:15635094
(PMID:11226175)
RGD
UniProt
PMID:11226175 PMID:15635094 RGD:597976622 RGD:70624 NCBI chrNW_004955468:11,817,647...11,820,456
Ensembl chrNW_004955468:11,818,604...11,819,872
JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis class N involved_in ISO (PMID:10574991) MGI PMID:10574991 NCBI chrNW_004955402:45,979,577...46,114,634
Ensembl chrNW_004955402:45,983,826...46,114,752
JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis class O involved_in ISO (PMID:24049131), (PMID:24417746), (PMID:28337824)
(PMID:10781593)
UniProt PMID:10781593 PMID:24049131 PMID:24417746 PMID:28337824 NCBI chrNW_004955472:1,084,932...1,094,243
Ensembl chrNW_004955472:1,084,932...1,094,243
JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis class P involved_in
acts_upstream_of_or_within
ISO (PMID:16162815)
(PMID:10944123)
(PMID:28334793)
UniProt
MGI
PMID:10944123 PMID:16162815 PMID:28334793 NCBI chrNW_004955407:36,178,323...36,185,317 JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis class Q acts_upstream_of_or_within
involved_in
ISO (PMID:9729469)
(PMID:10373468)
(PMID:16162815)
MGI
UniProt
PMID:9729469 PMID:10373468 PMID:16162815 NCBI chrNW_004955442:16,620,009...16,635,308
Ensembl chrNW_004955442:16,620,009...16,631,343
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis class U involved_in ISO (PMID:15034568) HGNC-UCL PMID:15034568 NCBI chrNW_004955422:26,685,060...26,774,261
Ensembl chrNW_004955422:26,685,060...26,775,416
JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis class V involved_in ISO (PMID:15623507)
(PMID:15623507), (PMID:15720390)
UniProt PMID:15623507 PMID:15720390 NCBI chrNW_004955452:6,128,262...6,139,204
Ensembl chrNW_004955452:6,128,262...6,139,204
JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis class W involved_in ISO PMID:14517336 UniProt PMID:14517336 RGD:1299613 NCBI chrNW_004955451:1,388,474...1,391,671
Ensembl chrNW_004955451:1,388,474...1,391,559
JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis class X involved_in ISO PMID:15635094 UniProt PMID:15635094 RGD:597976622 NCBI chrNW_004955420:12,825,438...12,853,658 JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis class Y acts_upstream_of_or_within ISO (PMID:16162815) MGI PMID:16162815 NCBI chrNW_004955474:11,945,871...11,946,419
Ensembl chrNW_004955474:11,944,302...11,947,092
JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis class Z involved_in ISO (PMID:15208306) UniProt PMID:15208306 NCBI chrNW_004955420:12,994,892...13,003,170 JBrowse link
G Slc30a5 solute carrier family 30 member 5 acts_upstream_of_positive_effect ISO (PMID:35525268) UniProt PMID:35525268 NCBI chrNW_004955446:158,843...196,275
Ensembl chrNW_004955446:156,541...196,275
JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (PMID:7903306) UniProt PMID:7903306 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO (PMID:23911318) MGI PMID:23911318 NCBI chrNW_004955435:13,029,377...13,040,972
Ensembl chrNW_004955435:13,028,916...13,043,928
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 acts_upstream_of_or_within ISO (PMID:9133604)
(PMID:23078545), (PMID:23542464), (PMID:23911318)
MGI PMID:9133604 PMID:23078545 PMID:23542464 PMID:23911318 NCBI chrNW_004955414:26,073,192...26,116,448
Ensembl chrNW_004955414:26,072,855...26,116,448
JBrowse link
IMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd1 adenosine monophosphate deaminase 1 involved_in ISO (PMID:27896074) MGI PMID:27896074 NCBI chrNW_004955435:17,962,487...17,991,625
Ensembl chrNW_004955435:17,962,514...17,991,556
JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (PMID:22212473) MGI PMID:22212473 NCBI chrNW_004955435:13,029,377...13,040,972
Ensembl chrNW_004955435:13,028,916...13,043,928
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (PMID:24940686) MGI PMID:24940686 NCBI chrNW_004955414:26,073,192...26,116,448
Ensembl chrNW_004955414:26,072,855...26,116,448
JBrowse link
G Aprt adenine phosphoribosyltransferase involved_in ISO (PMID:9776749) MGI PMID:9776749 NCBI chrNW_004955541:2,687,938...2,690,906
Ensembl chrNW_004955541:2,687,938...2,690,906
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:8878108)
(PMID:10037486)
MGI PMID:8878108 PMID:10037486 NCBI chrNW_004955473:462,940...510,006 JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO (PMID:24657168) MGI PMID:24657168 NCBI chrNW_004955532:766,577...794,461
Ensembl chrNW_004955532:766,577...794,409
JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within ISO (PMID:11502751) MGI PMID:11502751 NCBI chrNW_004955437:2,128,337...2,150,714
Ensembl chrNW_004955437:2,125,222...2,149,242
JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within ISO (PMID:15939867) MGI PMID:15939867 NCBI chrNW_004955425:11,949,849...12,000,610
Ensembl chrNW_004955425:11,945,858...11,985,023
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004955445:15,787,496...15,823,859
Ensembl chrNW_004955445:15,787,496...15,823,859
JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (PMID:9013981) MGI PMID:9013981 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
G Ptafr platelet activating factor receptor acts_upstream_of_or_within ISO (PMID:9013981) MGI PMID:9013981 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004955541:2,578,584...2,581,823
Ensembl chrNW_004955541:2,579,074...2,581,821
JBrowse link
G Mvk mevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004955455:8,933,250...8,953,883
Ensembl chrNW_004955455:8,930,125...8,953,894
JBrowse link
G Pmvk phosphomevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004955545:1,421,562...1,440,038
Ensembl chrNW_004955545:1,421,562...1,440,038
JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long chain family member 1 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004955403:24,190,674...24,235,354
Ensembl chrNW_004955403:24,190,674...24,236,780
JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004955490:6,143,833...6,228,395
Ensembl chrNW_004955490:6,143,833...6,228,452
JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004955431:17,477,113...17,524,539
Ensembl chrNW_004955431:17,477,086...17,524,539
JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004955408:3,336,214...3,391,117
Ensembl chrNW_004955408:3,333,392...3,392,141
JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (PMID:18487439) UniProt PMID:18487439 NCBI chrNW_004955455:10,282,308...10,427,439
Ensembl chrNW_004955455:10,308,192...10,426,076
JBrowse link
Mo-molybdopterin cofactor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin acts_upstream_of_or_within ISO PMID:23163752
(PMID:9812897)
MGI PMID:9812897 PMID:23163752 RGD:8554131 NCBI chrNW_004955466:3,017,474...3,526,375
Ensembl chrNW_004955466:3,016,479...3,526,231
JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 involved_in ISO (PMID:15180982)
(PMID:16021469), (PMID:9731530), (PMID:9921896)
UniProt PMID:9731530 PMID:9921896 PMID:15180982 PMID:16021469 NCBI chrNW_004955437:6,840,451...6,870,685
Ensembl chrNW_004955437:6,840,451...6,870,685
JBrowse link
G Mocs2 molybdenum cofactor synthesis 2 involved_in ISO (PMID:10053004)
(PMID:12732628), (PMID:15073332), (PMID:16021469), (PMID:25709896)
UniProt PMID:10053004 PMID:12732628 PMID:15073332 PMID:16021469 PMID:25709896 NCBI chrNW_004955446:14,295,737...14,305,735
Ensembl chrNW_004955446:14,295,737...14,307,838
JBrowse link
G Mocs3 molybdenum cofactor synthesis 3 involved_in ISO (PMID:15073332)
(PMID:30817134)
UniProt PMID:15073332 PMID:30817134 NCBI chrNW_004955445:7,470,030...7,472,323
Ensembl chrNW_004955445:7,470,888...7,472,267
JBrowse link
molybdopterin cofactor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin involved_in ISO (PMID:9990024)
(PMID:12565882)
(PMID:18411266)
(PMID:26613940)
CAFA
MGI
UniProt
PMID:9990024 PMID:12565882 PMID:18411266 PMID:26613940 NCBI chrNW_004955466:3,017,474...3,526,375
Ensembl chrNW_004955466:3,016,479...3,526,231
JBrowse link
G Mocos molybdenum cofactor sulfurase involved_in ISO (PMID:35372998) MGI PMID:35372998 NCBI chrNW_004955402:22,754,034...22,808,428
Ensembl chrNW_004955402:22,754,064...22,808,167
JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 involved_in
acts_upstream_of_or_within
ISO (PMID:17236133)
(PMID:12471057), (PMID:15862276), (PMID:17236133)
MGI PMID:12471057 PMID:15862276 PMID:17236133 NCBI chrNW_004955437:6,840,451...6,870,685
Ensembl chrNW_004955437:6,840,451...6,870,685
JBrowse link
G Mocs2 molybdenum cofactor synthesis 2 involved_in ISO (PMID:27138983) MGI PMID:27138983 NCBI chrNW_004955446:14,295,737...14,305,735
Ensembl chrNW_004955446:14,295,737...14,307,838
JBrowse link
NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in ISO (PMID:28792876) UniProt PMID:28792876 NCBI chrNW_004955441:10,114,863...10,128,948
Ensembl chrNW_004955441:10,110,380...10,129,015
JBrowse link
G Kynu kynureninase involved_in ISO (PMID:28792876) UniProt PMID:28792876 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase acts_upstream_of_or_within ISO (PMID:15381699) MGI PMID:15381699 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Naprt nicotinate phosphoribosyltransferase ISO RGD PMID:8694849 RGD:2289495 NCBI chrNW_004955454:2,280,223...2,283,613
Ensembl chrNW_004955454:2,280,223...2,283,613
JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 acts_upstream_of_or_within
involved_in
ISO (PMID:15381699), (PMID:16914673)
(PMID:27735788)
MGI
UniProt
PMID:15381699 PMID:16914673 PMID:27735788 NCBI chrNW_004955486:3,637,794...3,655,744
Ensembl chrNW_004955486:3,637,794...3,655,598
JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 ISO RGD PMID:22449973 RGD:13782043 NCBI chrNW_004955406:22,077,247...22,274,668
Ensembl chrNW_004955406:22,076,343...22,227,200
JBrowse link
G Nmnat3 nicotinamide nucleotide adenylyltransferase 3 acts_upstream_of_or_within ISO (PMID:16914673) MGI PMID:16914673 NCBI chrNW_004955508:5,909,808...6,024,301
Ensembl chrNW_004955508:5,913,898...6,022,128
JBrowse link
G Qprt quinolinate phosphoribosyltransferase ISO RGD PMID:8694849 RGD:2289495 NCBI chrNW_004955493:7,225,472...7,243,078
Ensembl chrNW_004955493:7,224,983...7,242,852
JBrowse link
NAD biosynthetic process via the salvage pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naprt nicotinate phosphoribosyltransferase involved_in ISO (PMID:17604275) FlyBase PMID:17604275 NCBI chrNW_004955454:2,280,223...2,283,613
Ensembl chrNW_004955454:2,280,223...2,283,613
JBrowse link
NADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase acts_upstream_of_or_within ISO (PMID:7439685), (PMID:9169132), (PMID:9330624), (PMID:9539108), (PMID:9627357)
(PMID:15271799)
(PMID:10627286), (PMID:14757696), (PMID:15998684), (PMID:1953691), (PMID:3377761), (PMID:9067418)
MGI PMID:1953691 PMID:3377761 PMID:7439685 PMID:9067418 PMID:9169132 More... NCBI chrNW_004955580:1,045,294...1,058,129
Ensembl chrNW_004955580:1,045,294...1,057,083
JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 ISO RGD PMID:21641335 RGD:11522736 NCBI chrNW_004955416:15,197,611...15,212,919
Ensembl chrNW_004955416:15,197,366...15,223,363
JBrowse link
G Nadk NAD kinase ISO RGD PMID:22550069 RGD:13703105 NCBI chrNW_004955486:9,191,923...9,217,547
Ensembl chrNW_004955486:9,191,923...9,217,538
JBrowse link
negative regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgk1 phosphoglycerate kinase 1 involved_in ISO (PMID:26942675) UniProt PMID:26942675 NCBI chrNW_004955557:1,566,534...1,584,799 JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:21325440 RGD:9685453 NCBI chrNW_004955507:2,035,918...2,141,327
Ensembl chrNW_004955507:2,036,050...2,137,377
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (PMID:20165904) BHF-UCL PMID:20165904 NCBI chrNW_004955453:5,680,418...5,913,236
Ensembl chrNW_004955453:5,680,211...5,911,589
JBrowse link
negative regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpca hippocalcin ISO RGD PMID:15336960 RGD:9686438 NCBI chrNW_004955452:11,142,282...11,150,798
Ensembl chrNW_004955452:11,140,373...11,154,261
JBrowse link
G Rd3 RD3 regulator of GUCY2D involved_in ISO (PMID:21928830), (PMID:30559291)
(PMID:27471269)
UniProt PMID:21928830 PMID:27471269 PMID:30559291 NCBI chrNW_004955489:896,964...903,855 JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in ISO (PMID:7782310) BHF-UCL PMID:7782310 NCBI chrNW_004955424:16,494,052...16,524,790
Ensembl chrNW_004955424:16,493,960...16,524,998
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
negative regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpin1 lipin 1 ISO RGD PMID:21715287 RGD:38599010 NCBI chrNW_004955487:6,139,188...6,207,316
Ensembl chrNW_004955487:6,138,926...6,210,012
JBrowse link
negative regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of_or_within ISO (PMID:20018880) MGI PMID:20018880 NCBI chrNW_004955504:760,941...791,996
Ensembl chrNW_004955504:758,881...791,996
JBrowse link
negative regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chrNW_004955460:8,328,400...8,346,755
Ensembl chrNW_004955460:8,326,891...8,346,550
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
negative regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:24201375) ARUK-UCL PMID:24201375 RGD:14697729 NCBI chrNW_004955513:5,035,879...5,051,140
Ensembl chrNW_004955513:5,033,771...5,051,200
JBrowse link
negative regulation of UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 involved_in ISO (PMID:35229715) FlyBase PMID:35229715 NCBI chrNW_004955442:14,775,528...14,791,650
Ensembl chrNW_004955442:14,782,755...14,791,649
JBrowse link
nucleoside diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 acts_upstream_of_or_within ISO (PMID:15122917) MGI PMID:15122917 NCBI chrNW_004955513:5,352,843...5,357,671
Ensembl chrNW_004955513:5,353,229...5,356,019
JBrowse link
nucleoside monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 acts_upstream_of_or_within ISO (PMID:15122917) MGI PMID:15122917 NCBI chrNW_004955513:5,352,843...5,357,671
Ensembl chrNW_004955513:5,353,229...5,356,019
JBrowse link
nucleoside phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase involved_in ISO (PMID:34768989) FlyBase PMID:34768989 NCBI chrNW_004955447:2,031,851...2,067,005
Ensembl chrNW_004955447:2,031,258...2,067,210
JBrowse link
nucleoside triphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in ISO (PMID:30587587) UniProt PMID:30587587 NCBI chrNW_004955442:15,497,779...15,498,873
Ensembl chrNW_004955442:15,497,779...15,498,873
JBrowse link
nucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within ISO (PMID:8845311) MGI PMID:8845311 NCBI chrNW_004955542:155,741...163,759
Ensembl chrNW_004955542:155,742...163,759
JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chrNW_004955550:1,290,816...1,299,553
Ensembl chrNW_004955550:1,290,244...1,298,068
JBrowse link
phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase involved_in ISO (PMID:18606822) UniProt PMID:18606822 NCBI chrNW_004955420:27,484,500...27,508,360
Ensembl chrNW_004955420:27,482,709...27,508,360
JBrowse link
G Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:9212163)
(PMID:9299423)
BHF-UCL
MGI
PMID:9212163 PMID:9299423 NCBI chrNW_004955437:633,522...642,659 JBrowse link
G Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 involved_in ISO (PMID:9212163) BHF-UCL PMID:9212163 NCBI chrNW_004955513:4,142,074...4,145,097
Ensembl chrNW_004955513:4,135,460...4,149,677
JBrowse link
G Dgka diacylglycerol kinase alpha involved_in ISO (PMID:15544348), (PMID:2175712), (PMID:22627129)
(PMID:23949095)
UniProt PMID:2175712 PMID:15544348 PMID:22627129 PMID:23949095 NCBI chrNW_004955458:3,517,519...3,544,651
Ensembl chrNW_004955458:3,524,542...3,544,374
JBrowse link
G Dgkb diacylglycerol kinase beta involved_in ISO PMID:23949095 UniProt PMID:23949095 RGD:30309912 NCBI chrNW_004955410:17,677,375...18,304,409
Ensembl chrNW_004955410:17,676,930...18,243,869
JBrowse link
G Dgkd diacylglycerol kinase delta involved_in ISO (PMID:17880279), (PMID:23949095) UniProt PMID:17880279 PMID:23949095 NCBI chrNW_004955453:2,740,922...2,802,669
Ensembl chrNW_004955453:2,742,842...2,835,811
JBrowse link
G Dgke diacylglycerol kinase epsilon involved_in ISO (PMID:15544348), (PMID:19744926), (PMID:22108654) UniProt PMID:15544348 PMID:19744926 PMID:22108654 NCBI chrNW_004955451:5,966,773...5,988,004
Ensembl chrNW_004955451:5,969,070...5,988,004
JBrowse link
G Dgkg diacylglycerol kinase gamma involved_in ISO (PMID:32033984)
(PMID:8034597)
UniProt PMID:8034597 PMID:32033984 NCBI chrNW_004955420:21,296,515...21,481,651
Ensembl chrNW_004955420:21,296,515...21,481,679
JBrowse link
G Dgkh diacylglycerol kinase eta involved_in ISO (PMID:27643686) UniProt PMID:27643686 NCBI chrNW_004955518:4,104,700...4,263,657
Ensembl chrNW_004955518:4,113,265...4,208,449
JBrowse link
G Dgki diacylglycerol kinase iota involved_in ISO PMID:15024004 UniProt PMID:15024004 RGD:1302915 NCBI chrNW_004955494:5,119,419...5,541,058
Ensembl chrNW_004955494:5,264,414...5,539,540
JBrowse link
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:23610160), (PMID:23767959)
(PMID:22732145), (PMID:23949095), (PMID:9099683)
ParkinsonsUK-UCL PMID:9099683 PMID:22732145 PMID:23610160 PMID:23767959 PMID:23949095 NCBI chrNW_004955514:452,548...475,240
Ensembl chrNW_004955514:453,886...464,978
JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISO (PMID:15544348), (PMID:19744926)
(PMID:12883552), (PMID:27739494)
UniProt PMID:12883552 PMID:15544348 PMID:19744926 PMID:27739494 NCBI chrNW_004955422:1,658,237...1,687,000
Ensembl chrNW_004955422:1,657,926...1,695,404
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in ISO PMID:22905194 UniProt PMID:22905194 RGD:30309909 NCBI chrNW_004955431:17,291,890...17,363,611
Ensembl chrNW_004955431:17,291,270...17,363,714
JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in ISO (PMID:22905194) UniProt PMID:22905194 NCBI chrNW_004955470:3,633,076...3,643,635
Ensembl chrNW_004955470:3,632,869...3,643,642
JBrowse link
G Pld1 phospholipase D1 acts_upstream_of_or_within ISO PMID:18519738 MGI PMID:18519738 RGD:8554572 NCBI chrNW_004955420:1,697,716...1,892,741
Ensembl chrNW_004955420:1,696,751...1,892,741
JBrowse link
G Pnpla3 patatin like domain 3, 1-acylglycerol-3-phosphate O-acyltransferase involved_in ISO (PMID:22560221) BHF-UCL PMID:22560221 NCBI chrNW_004955413:28,879,646...28,896,224
Ensembl chrNW_004955413:28,879,748...28,893,938
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 acts_upstream_of_or_within ISO (PMID:12456676) MGI PMID:12456676 NCBI chrNW_004955423:7,393,186...7,414,199
Ensembl chrNW_004955423:7,393,186...7,423,903
JBrowse link
phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in ISO (PMID:4335615) BHF-UCL PMID:4335615 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298
JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chrNW_004955468:12,977,956...12,979,282
Ensembl chrNW_004955468:12,977,956...12,979,753
JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 acts_upstream_of_or_within
involved_in
ISO (PMID:20018880)
(PMID:10191259), (PMID:37137909)
MGI
UniProt
PMID:10191259 PMID:20018880 PMID:37137909 NCBI chrNW_004955435:14,704,269...14,743,765
Ensembl chrNW_004955435:14,704,269...14,743,765
JBrowse link
G Chka choline kinase alpha acts_upstream_of_or_within
involved_in
ISO (PMID:16371353)
(PMID:19915674), (PMID:23416529), (PMID:34077757)
MGI
UniProt
PMID:16371353 PMID:19915674 PMID:23416529 PMID:34077757 NCBI chrNW_004955422:17,710,981...17,766,256
Ensembl chrNW_004955422:17,710,434...17,766,256
JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10893425)
(PMID:20018880)
UniProt
MGI
PMID:10893425 PMID:20018880 NCBI chrNW_004955405:37,081,024...37,093,798 JBrowse link
G Dhrs7b dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (PMID:28930673) MGI PMID:28930673 NCBI chrNW_004955577:1,071,904...1,122,204
Ensembl chrNW_004955577:1,071,775...1,121,940
JBrowse link
G Fabp5 fatty acid binding protein 5 acts_upstream_of_or_within ISO (PMID:15164767) MGI PMID:15164767 NCBI chrNW_004955444:325,515...329,248
Ensembl chrNW_004955444:325,515...331,516
JBrowse link
G Fgf7 fibroblast growth factor 7 ISO surfactant disaturated phosphatidylcholine (DSPC) synthesis RGD PMID:11316745 RGD:68696 NCBI chrNW_004955409:4,633,542...4,686,768
Ensembl chrNW_004955409:4,632,858...4,686,860
JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 involved_in ISO (PMID:18238778) UniProt PMID:18238778 NCBI chrNW_004955536:1,266,920...1,313,765
Ensembl chrNW_004955536:1,265,409...1,313,326
JBrowse link
G Lcat lecithin-cholesterol acyltransferase involved_in ISO (PMID:11966470)
(PMID:12354767)
BHF-UCL
UniProt
PMID:11966470 PMID:12354767 NCBI chrNW_004955484:8,772,692...8,776,122
Ensembl chrNW_004955484:8,772,692...8,776,122
JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of ISO (PMID:20018880) MGI PMID:20018880 NCBI chrNW_004955504:760,941...791,996
Ensembl chrNW_004955504:758,881...791,996
JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline acts_upstream_of_or_within
involved_in
ISO (PMID:15798219)
(PMID:11829742)
(PMID:10480912)
(PMID:12842190)
PMID:8185307
PMID:8381041
PMID:24275660
MGI
UniProt
RGD
PMID:8185307 PMID:8381041 PMID:10480912 PMID:11829742 PMID:12718547 More... RGD:39458015 RGD:405866193 RGD:729578 RGD:729598 NCBI chrNW_004955420:12,464,857...12,513,017
Ensembl chrNW_004955420:12,464,857...12,500,574
JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in ISO (PMID:10480912)
(PMID:12842190)
UniProt PMID:10480912 PMID:12842190 NCBI chrNW_004955509:4,896,208...4,990,101
Ensembl chrNW_004955509:4,896,190...4,990,149
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chrNW_004955577:365,031...443,138
Ensembl chrNW_004955577:367,288...443,138
JBrowse link
phosphatidylethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in ISO (PMID:22503541) UniProt PMID:22503541 NCBI chrNW_004955467:10,032,792...10,039,789 JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 involved_in ISO (PMID:10191259) UniProt PMID:10191259 NCBI chrNW_004955435:14,704,269...14,743,765
Ensembl chrNW_004955435:14,704,269...14,743,765
JBrowse link
G Chka choline kinase alpha involved_in ISO (PMID:19915674) UniProt PMID:19915674 NCBI chrNW_004955422:17,710,981...17,766,256
Ensembl chrNW_004955422:17,710,434...17,766,256
JBrowse link
G Chkb choline kinase beta involved_in ISO (PMID:19915674) UniProt PMID:19915674 NCBI chrNW_004955413:33,588,375...33,592,054
Ensembl chrNW_004955413:33,588,600...33,591,758
JBrowse link
G Etnk1 ethanolamine kinase 1 involved_in ISO (PMID:11044454) UniProt PMID:11044454 NCBI chrNW_004955413:18,036,646...18,094,875
Ensembl chrNW_004955413:18,036,646...18,089,370
JBrowse link
G Etnk2 ethanolamine kinase 2 acts_upstream_of_or_within ISO (PMID:16861741) MGI PMID:16861741 NCBI chrNW_004955406:39,996,850...40,013,753
Ensembl chrNW_004955406:39,996,850...40,013,753
JBrowse link
G Pcyt2 phosphate cytidylyltransferase 2, ethanolamine involved_in ISO (PMID:31637422)
(PMID:17325045)
UniProt PMID:17325045 PMID:31637422 NCBI chrNW_004955506:1,258,993...1,266,108
Ensembl chrNW_004955506:1,256,770...1,266,762
JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO (PMID:30488656), (PMID:30858161) UniProt PMID:30488656 PMID:30858161 NCBI chrNW_004955455:5,744,816...5,789,408
Ensembl chrNW_004955455:5,744,816...5,789,534
JBrowse link
G Selenoi selenoprotein I involved_in ISO (PMID:17132865)
(PMID:28052917), (PMID:29500230)
HGNC
UniProt
PMID:17132865 PMID:28052917 PMID:29500230 NCBI chrNW_004955469:8,369,499...8,410,628
Ensembl chrNW_004955469:8,369,479...8,408,659
JBrowse link
phosphatidylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in ISO (PMID:19075029) UniProt PMID:19075029 NCBI chrNW_004955431:17,291,890...17,363,611
Ensembl chrNW_004955431:17,291,270...17,363,714
JBrowse link
phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase involved_in ISO (PMID:8110188), (PMID:9407135) RGD
UniProt
PMID:7998949 PMID:8110188 PMID:8804431 PMID:9407135 RGD:1626301 RGD:724663 NCBI chrNW_004955493:7,087,491...7,091,306
Ensembl chrNW_004955493:7,087,491...7,092,809
JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISO (PMID:9407135) UniProt PMID:9407135 NCBI chrNW_004955474:5,057,833...5,104,235
Ensembl chrNW_004955474:5,057,833...5,104,235
JBrowse link
G Dgke diacylglycerol kinase epsilon involved_in ISO (PMID:19744926) UniProt PMID:19744926 NCBI chrNW_004955451:5,966,773...5,988,004
Ensembl chrNW_004955451:5,969,070...5,988,004
JBrowse link
G Impa1 inositol monophosphatase 1 involved_in ISO (PMID:1377913) RGD
UniProt
PMID:1377913 PMID:11853098 RGD:2302239 NCBI chrNW_004955417:14,114...40,128
Ensembl chrNW_004955417:12,504...40,902
JBrowse link
G Inppl1 inositol polyphosphate phosphatase like 1 acts_upstream_of_or_within ISO (PMID:21624956) MGI PMID:21624956 NCBI chrNW_004955414:19,146,304...19,163,923
Ensembl chrNW_004955414:19,145,432...19,163,923
JBrowse link
G Mboat7 membrane bound acylglycerophosphatidylinositol O-acyltransferase MBOAT7 involved_in ISO (PMID:18094042) UniProt PMID:18094042 NCBI chrNW_004955604:90,683...99,067
Ensembl chrNW_004955604:90,362...99,986
JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO (PMID:11279162) UniProt PMID:11279162 NCBI chrNW_004955507:3,729,947...3,761,703
Ensembl chrNW_004955507:3,730,071...3,756,880
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha acts_upstream_of_or_within ISO (PMID:20622009) MGI PMID:20622009 NCBI chrNW_004955588:555,818...605,459
Ensembl chrNW_004955588:555,821...605,723
JBrowse link
G Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta acts_upstream_of_or_within ISO (PMID:20622009) MGI PMID:20622009 NCBI chrNW_004955434:4,020,219...4,315,072
Ensembl chrNW_004955434:4,019,847...4,315,072
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma acts_upstream_of_or_within ISO (PMID:20622009) MGI PMID:20622009 NCBI chrNW_004955495:5,573,549...5,616,957
Ensembl chrNW_004955495:5,573,549...5,617,847
JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:11606584), (PMID:12181444) UniProt PMID:11606584 PMID:12181444 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Sh3yl1 SH3 and SYLF domain containing 1 acts_upstream_of_or_within ISO (PMID:21624956) MGI PMID:21624956 NCBI chrNW_004955487:258,116...290,377
Ensembl chrNW_004955487:257,869...289,832
JBrowse link
phosphatidylinositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efr3b EFR3 homolog B involved_in ISO (PMID:23229899) UniProt PMID:23229899 NCBI chrNW_004955469:7,159,087...7,215,234
Ensembl chrNW_004955469:7,159,087...7,215,627
JBrowse link
G Hycc1 hyccin PI4KA lipid kinase complex subunit 1 involved_in ISO (PMID:26571211) UniProt PMID:26571211 NCBI chrNW_004955410:25,274,360...25,342,112
Ensembl chrNW_004955410:25,227,280...25,342,106
JBrowse link
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in ISO (PMID:10574768) UniProt PMID:10574768 NCBI chrNW_004955532:1,625,298...1,644,973
Ensembl chrNW_004955532:1,625,298...1,644,973
JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO (PMID:10574768) UniProt PMID:10574768 NCBI chrNW_004955532:766,577...794,461
Ensembl chrNW_004955532:766,577...794,409
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in ISO (PMID:12747803), (PMID:1847047) UniProt PMID:1847047 PMID:12747803 NCBI chrNW_004955416:8,300,059...8,310,225
Ensembl chrNW_004955416:8,299,318...8,309,865
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in ISO (PMID:12747803) UniProt PMID:12747803 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180
JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in ISO (PMID:11085927), (PMID:12747803) UniProt PMID:11085927 PMID:12747803 NCBI chrNW_004955578:597,105...614,081
Ensembl chrNW_004955578:598,351...614,081
JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO (PMID:11923287), (PMID:12324459), (PMID:25168678) UniProt PMID:11923287 PMID:12324459 PMID:25168678 NCBI chrNW_004955507:3,729,947...3,761,703
Ensembl chrNW_004955507:3,730,071...3,756,880
JBrowse link
G Pi4k2b phosphatidylinositol 4-kinase type 2 beta involved_in ISO (PMID:11923287), (PMID:12324459) UniProt PMID:11923287 PMID:12324459 NCBI chrNW_004955443:19,728,997...19,760,569
Ensembl chrNW_004955443:19,730,459...19,760,177
JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO (PMID:23229899) UniProt PMID:23229899 NCBI chrNW_004955442:19,446,955...19,594,790
Ensembl chrNW_004955442:19,446,955...19,598,725
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in ISO (PMID:7628435) UniProt PMID:7628435 NCBI chrNW_004955402:28,081,150...28,195,305
Ensembl chrNW_004955402:28,081,098...28,196,252
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO RGD PMID:12882977 RGD:4144086 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta involved_in ISO (PMID:12502714) RGD
UniProt
PMID:12502714 PMID:12882977 RGD:4144086 NCBI chrNW_004955501:251,829...381,255
Ensembl chrNW_004955501:259,645...379,909
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma involved_in ISO (PMID:12502714) RGD
UniProt
PMID:12502714 PMID:12882977 RGD:4144086 NCBI chrNW_004955410:11,402,476...11,433,335
Ensembl chrNW_004955410:11,402,520...11,437,422
JBrowse link
G Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:11331269) UniProt PMID:11331269 NCBI chrNW_004955442:2,553,135...2,651,772
Ensembl chrNW_004955442:2,553,143...2,651,772
JBrowse link
G Tmem150a transmembrane protein 150A involved_in ISO (PMID:25608530) UniProt PMID:25608530 NCBI chrNW_004955424:1,903,065...1,907,046
Ensembl chrNW_004955424:1,903,065...1,907,046
JBrowse link
G Ttc7b tetratricopeptide repeat domain 7B involved_in ISO (PMID:23229899), (PMID:26571211) UniProt PMID:23229899 PMID:26571211 NCBI chrNW_004955438:12,946,594...13,165,239
Ensembl chrNW_004955438:12,946,549...13,187,375
JBrowse link
phosphatidylinositol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 involved_in ISO (PMID:8999962) ComplexPortal PMID:8999962 NCBI chrNW_004955466:13,898,311...13,972,506
Ensembl chrNW_004955466:13,898,298...13,972,506
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:8999962) ComplexPortal PMID:8999962 NCBI chrNW_004955451:16,616,595...16,625,731
Ensembl chrNW_004955451:16,616,595...16,625,730
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha acts_upstream_of_or_within ISO (PMID:24098492) MGI PMID:24098492 NCBI chrNW_004955414:31,896,161...31,999,730
Ensembl chrNW_004955414:31,896,161...31,999,730
JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta acts_upstream_of_or_within ISO (PMID:24098492) MGI PMID:24098492 NCBI chrNW_004955406:40,247,690...40,317,556
Ensembl chrNW_004955406:40,247,382...40,317,556
JBrowse link
G Pik3c2g phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma involved_in ISO (PMID:9514948)
PMID:9516481
UniProt PMID:9514948 PMID:9516481 RGD:729517 NCBI chrNW_004955413:14,454,376...14,764,323
Ensembl chrNW_004955413:14,454,377...14,764,558
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in
acts_upstream_of_or_within
ISO (PMID:8999962)
(PMID:24098492)
ComplexPortal
MGI
PMID:8999962 PMID:24098492 NCBI chrNW_004955402:28,081,150...28,195,305
Ensembl chrNW_004955402:28,081,098...28,196,252
JBrowse link
G Pik3r4 phosphoinositide-3-kinase regulatory subunit 4 involved_in ISO (PMID:8999962) ComplexPortal PMID:8999962 NCBI chrNW_004955501:7,604,934...7,681,947
Ensembl chrNW_004955501:7,604,501...7,681,947
JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:8999962) ComplexPortal PMID:8999962 NCBI chrNW_004955414:15,733,116...16,043,555
Ensembl chrNW_004955414:15,731,519...16,043,555
JBrowse link
phosphatidylserine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plscr1 phospholipid scramblase 1 involved_in ISO (PMID:12509439) UniProt PMID:12509439 NCBI chrNW_004955474:10,953,381...10,989,100 JBrowse link
G Ptdss1 phosphatidylserine synthase 1 involved_in ISO (PMID:19014349) FlyBase PMID:19014349 NCBI chrNW_004955417:12,268,908...12,327,127
Ensembl chrNW_004955417:12,268,107...12,327,127
JBrowse link
G Ptdss2 phosphatidylserine synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:19014349)
(PMID:12361952)
FlyBase
MGI
PMID:12361952 PMID:19014349 NCBI chrNW_004955476:11,554,962...11,585,574
Ensembl chrNW_004955476:11,554,962...11,581,906
JBrowse link
phosphocreatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ckb creatine kinase B involved_in ISO (PMID:8186255) UniProt PMID:8186255 NCBI chrNW_004955538:2,379,868...2,380,771 JBrowse link
G Ckm creatine kinase, M-type acts_upstream_of_or_within ISO (PMID:15601660) RGD
MGI
PMID:12069495 PMID:15601660 RGD:1359082 NCBI chrNW_004955555:2,318,072...2,330,733
Ensembl chrNW_004955555:2,318,072...2,336,811
JBrowse link
phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chrNW_004955431:17,477,113...17,524,539
Ensembl chrNW_004955431:17,477,086...17,524,539
JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:15655248 RGD:2312811 NCBI chrNW_004955408:3,336,214...3,391,117
Ensembl chrNW_004955408:3,333,392...3,392,141
JBrowse link
G Adgrf5 adhesion G protein-coupled receptor F5 acts_upstream_of ISO (PMID:23590306) MGI PMID:23590306 NCBI chrNW_004955437:11,639,555...11,710,362
Ensembl chrNW_004955437:11,639,891...11,688,257
JBrowse link
G Fgf7 fibroblast growth factor 7 ISO RGD PMID:11316745 RGD:68696 NCBI chrNW_004955409:4,633,542...4,686,768
Ensembl chrNW_004955409:4,632,858...4,686,860
JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 involved_in ISO (PMID:38693265) UniProt PMID:38693265 NCBI chrNW_004955406:4,673,797...4,702,858
Ensembl chrNW_004955406:4,674,140...4,702,763
JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 involved_in ISO (PMID:11003606) UniProt PMID:11003606 NCBI chrNW_004955474:6,119,516...6,192,784
Ensembl chrNW_004955474:6,118,437...6,193,847
JBrowse link
G Hexb hexosaminidase subunit beta acts_upstream_of_or_within ISO (PMID:15198669) MGI PMID:15198669 NCBI chrNW_004955425:25,942,341...25,961,312
Ensembl chrNW_004955425:25,942,278...25,961,312
JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 involved_in ISO (PMID:16704971) UniProt PMID:16704971 NCBI chrNW_004955504:760,941...791,996
Ensembl chrNW_004955504:758,881...791,996
JBrowse link
G Mboat1 membrane bound glycerophospholipid O-acyltransferase 1 involved_in ISO (PMID:18287005) UniProt PMID:18287005 NCBI chrNW_004955483:6,273,729...6,379,844
Ensembl chrNW_004955483:6,273,729...6,381,559
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha involved_in ISO (PMID:15157668) UniProt PMID:15157668 NCBI chrNW_004955588:555,818...605,459
Ensembl chrNW_004955588:555,821...605,723
JBrowse link
G Pld1 phospholipase D1 acts_upstream_of_or_within ISO PMID:18519738 MGI PMID:18519738 RGD:8554572 NCBI chrNW_004955420:1,697,716...1,892,741
Ensembl chrNW_004955420:1,696,751...1,892,741
JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:17148578 RGD:2324892 NCBI chrNW_004955437:3,285,281...3,354,099
Ensembl chrNW_004955437:3,288,830...3,357,048
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 acts_upstream_of_or_within ISO (PMID:12456676) MGI PMID:12456676 NCBI chrNW_004955423:7,393,186...7,414,199
Ensembl chrNW_004955423:7,393,186...7,423,903
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (PMID:19515693) MGI PMID:19515693 NCBI chrNW_004955419:20,811,931...20,844,420
Ensembl chrNW_004955419:20,812,702...20,878,599
JBrowse link
platelet activating factor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chpt1 choline phosphotransferase 1 involved_in ISO (PMID:10893425) UniProt PMID:10893425 NCBI chrNW_004955405:37,081,024...37,093,798 JBrowse link
G Lpcat2 lysophosphatidylcholine acyltransferase 2 involved_in ISO (PMID:17182612) UniProt PMID:17182612 NCBI chrNW_004955433:13,052,480...13,120,197
Ensembl chrNW_004955433:13,052,605...13,119,775
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO (PMID:9403692) UniProt PMID:9403692 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO (PMID:19501189) UniProt PMID:19501189 NCBI chrNW_004955609:182,706...212,102 JBrowse link
G Pla2g5 phospholipase A2 group V ISO RGD PMID:11106649 RGD:2303037 NCBI chrNW_004955452:662,281...721,507
Ensembl chrNW_004955452:710,271...723,142
JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 ISO RGD PMID:31172217 RGD:329403053 NCBI chrNW_004955462:9,196,984...9,278,850
Ensembl chrNW_004955462:9,207,314...9,278,621
JBrowse link
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004955486:4,275,371...4,287,152
Ensembl chrNW_004955486:4,274,238...4,289,809
JBrowse link
G Hnf1a HNF1 homeobox A ISO RGD PMID:20841353 RGD:150540305 NCBI chrNW_004955455:10,694,102...10,717,613
Ensembl chrNW_004955455:10,694,102...10,717,613
JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chrNW_004955414:13,867,880...13,878,040
Ensembl chrNW_004955414:13,867,880...13,878,040
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (PMID:21080215) BHF-UCL PMID:21080215 NCBI chrNW_004955453:5,680,418...5,913,236
Ensembl chrNW_004955453:5,680,211...5,911,589
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) AgBase PMID:24747689 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004955449:3,093,603...3,182,513
Ensembl chrNW_004955449:3,093,603...3,186,737
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:20348225 RGD:13432160 NCBI chrNW_004955580:915,668...921,703
Ensembl chrNW_004955580:915,188...922,791
JBrowse link
G Tmsb4x thymosin beta 4 X-linked involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004955544:266,397...268,447
Ensembl chrNW_004955544:266,397...268,447
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:28802038) ARUK-UCL PMID:28802038 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2b receptor acts_upstream_of_or_within ISO (PMID:18340377) MGI PMID:18340377 NCBI chrNW_004955467:1,342,271...1,363,149
Ensembl chrNW_004955467:1,342,271...1,363,138
JBrowse link
G Guca1a guanylate cyclase activator 1A ISO RGD PMID:12545196 RGD:1599357 NCBI chrNW_004955437:8,370,553...8,382,640
Ensembl chrNW_004955437:8,376,091...8,382,640
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8396727 PMID:8943280 RGD:2315982 RGD:631732 NCBI chrNW_004955410:32,176,683...32,229,187
Ensembl chrNW_004955410:32,176,536...32,229,431
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:9322919) ARUK-UCL PMID:9322919 NCBI chrNW_004955406:41,706,088...41,716,173
Ensembl chrNW_004955406:41,705,305...41,716,173
JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004955468:12,532,937...12,559,859
Ensembl chrNW_004955468:12,534,064...12,559,434
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1332507 RGD:2316794 NCBI chrNW_004955439:20,956,862...20,957,839
Ensembl chrNW_004955439:20,956,862...20,957,839
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:11604398) CAFA PMID:11604398 NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117
JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004955420:25,274,269...25,291,984
Ensembl chrNW_004955420:25,273,431...25,296,471
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:15641770) UniProt PMID:15641770 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:15705806) UniProt PMID:15705806 NCBI chrNW_004955460:8,790,798...8,794,902
Ensembl chrNW_004955460:8,790,798...8,794,902
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in ISO (PMID:10493819) BHF-UCL PMID:10493819 NCBI chrNW_004955441:15,205,883...15,263,617
Ensembl chrNW_004955441:15,207,252...15,242,914
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450
JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004955448:4,366,706...4,372,626
Ensembl chrNW_004955448:4,366,706...4,372,626
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO (PMID:8670200) ARUK-UCL PMID:8670200 NCBI chrNW_004955414:18,177,406...18,215,428
Ensembl chrNW_004955414:18,177,406...18,215,428
JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004955421:4,856,366...4,880,309
Ensembl chrNW_004955421:4,856,366...4,880,309
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
positive regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:23767959) ParkinsonsUK-UCL PMID:23767959 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
positive regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long chain family member 3 involved_in ISO (PMID:18003621) UniProt PMID:18003621 NCBI chrNW_004955453:10,916,423...10,963,986
Ensembl chrNW_004955453:10,913,786...10,947,963
JBrowse link
G Capn2 calpain 2 ISO RGD PMID:9481489 RGD:13792658 NCBI chrNW_004955520:1,287,829...1,315,318
Ensembl chrNW_004955520:1,286,356...1,315,328
JBrowse link
G Rab38 RAB38, member RAS oncogene family ISO RGD PMID:28438206 RGD:13524861 NCBI chrNW_004955414:5,158,860...5,214,108
Ensembl chrNW_004955414:5,158,261...5,215,698
JBrowse link
positive regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr2a 5-hydroxytryptamine receptor 2A involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004955431:583,165...646,991
Ensembl chrNW_004955431:580,713...647,345
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004955453:4,352,278...4,367,807
Ensembl chrNW_004955453:4,351,668...4,367,807
JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004955490:912,615...1,126,347
Ensembl chrNW_004955490:910,415...1,126,373
JBrowse link
positive regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrf5 adhesion G protein-coupled receptor F5 acts_upstream_of_or_within ISO (PMID:23590306) MGI PMID:23590306 NCBI chrNW_004955437:11,639,555...11,710,362
Ensembl chrNW_004955437:11,639,891...11,688,257
JBrowse link
G Chp1 calcineurin like EF-hand protein 1 involved_in ISO (PMID:30846317) FlyBase PMID:30846317 NCBI chrNW_004955416:8,090,034...8,131,605
Ensembl chrNW_004955416:8,090,034...8,132,870
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:19191103 RGD:126790485 NCBI chrNW_004955457:3,177,905...4,236,152
Ensembl chrNW_004955457:3,177,991...4,228,558
JBrowse link
G Pc pyruvate carboxylase involved_in ISO PMID:23357280 CACAO PMID:23357280 RGD:10047307 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
proton motive force-driven ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:37244256) UniProt PMID:37244256 NCBI chrNW_004955402:31,652,226...31,662,114
Ensembl chrNW_004955402:31,651,960...31,662,762
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:25168243), (PMID:36239646), (PMID:37244256) UniProt PMID:25168243 PMID:36239646 PMID:37244256 NCBI chrNW_004955458:4,188,167...4,195,575
Ensembl chrNW_004955458:4,186,461...4,195,494
JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 involved_in ISO (PMID:37244256) UniProt PMID:37244256 NCBI chrNW_004955451:12,426,309...12,429,460
Ensembl chrNW_004955451:12,426,309...12,429,395
JBrowse link
proton motive force-driven mitochondrial ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955402:31,652,226...31,662,114
Ensembl chrNW_004955402:31,651,960...31,662,762
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955458:4,188,167...4,195,575
Ensembl chrNW_004955458:4,186,461...4,195,494
JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955421:24,234,473...24,253,640
Ensembl chrNW_004955421:24,234,413...24,253,640
JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955495:6,664,394...6,666,693
Ensembl chrNW_004955495:6,664,394...6,666,693
JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955445:563,642...567,865
Ensembl chrNW_004955445:563,315...567,865
JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955404:11,420,964...11,421,171 JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955460:15,129,651...15,136,722
Ensembl chrNW_004955460:15,129,651...15,136,722
JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955412:19,555,736...19,563,094 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955435:14,940,502...14,952,423
Ensembl chrNW_004955435:14,940,434...14,954,310
JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955553:1,893,767...1,897,175
Ensembl chrNW_004955553:1,892,670...1,897,175
JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955407:25,601,253...25,609,933
Ensembl chrNW_004955407:25,601,083...25,609,888
JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in ISO (PMID:15850986) UniProt PMID:15850986 NCBI chrNW_004955407:33,288,194...33,298,817
Ensembl chrNW_004955407:33,286,178...33,299,420
JBrowse link
G Stoml2 stomatin like 2 involved_in ISO (PMID:23028053) UniProt PMID:23028053 NCBI chrNW_004955472:1,079,261...1,082,632
Ensembl chrNW_004955472:1,079,578...1,082,486
JBrowse link
purine nucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss2 adenylosuccinate synthase 2 acts_upstream_of_or_within ISO (PMID:12482871) MGI PMID:12482871 NCBI chrNW_004955406:7,684,979...7,715,179
Ensembl chrNW_004955406:7,683,596...7,715,616
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:9824441) UniProt PMID:9824441 NCBI chrNW_004955473:462,940...510,006 JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 acts_upstream_of_or_within ISO (PMID:12944494) MGI PMID:12944494 NCBI chrNW_004955479:9,388,241...9,406,717
Ensembl chrNW_004955479:9,388,108...9,406,764
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 acts_upstream_of_or_within ISO (PMID:12944494) MGI PMID:12944494 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in
acts_upstream_of
ISO (PMID:23704330)
(PMID:18767138)
BHF-UCL
UniProt
PMID:18767138 PMID:23704330 NCBI chrNW_004955466:5,422,141...5,485,773
Ensembl chrNW_004955466:5,420,702...5,485,773
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 involved_in ISO (PMID:12847698) UniProt PMID:12847698 NCBI chrNW_004955490:8,303,775...8,330,713
Ensembl chrNW_004955490:8,303,775...8,330,713
JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:35772404) UniProt PMID:35772404 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754
JBrowse link
purine nucleotide salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (PMID:9361033) UniProt PMID:9361033 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
purine ribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 acts_upstream_of ISO (PMID:15611115) UniProt PMID:15611115 NCBI chrNW_004955466:5,422,141...5,485,773
Ensembl chrNW_004955466:5,420,702...5,485,773
JBrowse link
pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal kinase ISO RGD PMID:2988502 RGD:2303018 NCBI chrNW_004955407:41,482,216...41,494,174
Ensembl chrNW_004955407:41,482,216...41,494,177
JBrowse link
G Pnpo pyridoxamine 5'-phosphate oxidase involved_in ISO (PMID:12824491) CAFA PMID:12824491 NCBI chrNW_004955451:13,184,861...13,190,933
Ensembl chrNW_004955451:13,183,826...13,191,707
JBrowse link
pyrimidine nucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:35772404) UniProt PMID:35772404 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754
JBrowse link
pyruvate decarboxylation to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase involved_in ISO (PMID:17314311)
(PMID:27621431)
(PMID:24534072)
MGI
ComplexPortal
RGD
PMID:7487891 PMID:17314311 PMID:24534072 PMID:27621431 RGD:1599112 NCBI chrNW_004955412:13,718,091...13,746,220
Ensembl chrNW_004955412:13,718,067...13,744,239
JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in ISO (PMID:27621431)
(PMID:17314311)
(PMID:24534072)
RGD
MGI
ComplexPortal
PMID:7487891 PMID:17314311 PMID:24534072 PMID:27621431 RGD:1599112 NCBI chrNW_004955410:12,212,981...12,238,561
Ensembl chrNW_004955410:12,212,963...12,238,561
JBrowse link
G Mpc1 mitochondrial pyruvate carrier 1 involved_in
acts_upstream_of_or_within
ISO (PMID:22628558) MGI PMID:22628558 NCBI chrNW_004955439:15,515,966...15,531,618
Ensembl chrNW_004955439:15,516,090...15,531,116
JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 acts_upstream_of_or_within
involved_in
ISO (PMID:24910426)
(PMID:22628558)
MGI PMID:22628558 PMID:24910426 NCBI chrNW_004955462:9,177,484...9,193,646 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 acts_upstream_of_or_within
involved_in
ISO (PMID:18586888)
(PMID:19081061), (PMID:24534072)
MGI
ComplexPortal
RGD
PMID:7487891 PMID:18586888 PMID:19081061 PMID:24534072 RGD:1599112 NCBI chrNW_004955586:98,492...114,927
Ensembl chrNW_004955586:97,172...114,928
JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004955405:6,383,088...6,383,946 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in ISO (PMID:19081061), (PMID:24534072) RGD
UniProt
PMID:7487891 PMID:19081061 PMID:24534072 RGD:1599112 NCBI chrNW_004955430:1,707,615...1,713,541
Ensembl chrNW_004955430:1,707,615...1,713,541
JBrowse link
G Pdhx pyruvate dehydrogenase complex component X involved_in ISO (PMID:27621431)
(PMID:24534072)
(PMID:17314311)
MGI
ComplexPortal
PMID:17314311 PMID:24534072 PMID:27621431 NCBI chrNW_004955422:11,335,766...11,405,565
Ensembl chrNW_004955422:11,335,766...11,405,565
JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in ISO (PMID:22195962) UniProt PMID:22195962 NCBI chrNW_004955449:2,546,790...2,582,402
Ensembl chrNW_004955449:2,549,139...2,582,243
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (PMID:22360721) UniProt PMID:22360721 NCBI chrNW_004955451:11,547,660...11,559,266
Ensembl chrNW_004955451:11,547,660...11,559,403
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:22865452) UniProt PMID:22865452 NCBI chrNW_004955509:4,809,422...4,888,802
Ensembl chrNW_004955509:4,809,399...4,878,976
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO (PMID:16606348)
(PMID:21852536)
UniProt PMID:16606348 PMID:21852536 NCBI chrNW_004955432:12,169,548...12,182,064
Ensembl chrNW_004955432:12,169,435...12,182,409
JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 involved_in ISO (PMID:38547260) UniProt PMID:38547260 NCBI chrNW_004955491:621,941...968,570
Ensembl chrNW_004955491:623,530...968,253
JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha acts_upstream_of_or_within ISO (PMID:16636270)
(PMID:16734431)
MGI PMID:16636270 PMID:16734431 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:25637806) UniProt PMID:25637806 NCBI chrNW_004955559:1,921,479...1,929,450
Ensembl chrNW_004955559:1,917,301...1,928,493
JBrowse link
regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guca1a guanylate cyclase activator 1A acts_upstream_of_or_within ISO (PMID:15336959) MGI PMID:15336959 NCBI chrNW_004955437:8,370,553...8,382,640
Ensembl chrNW_004955437:8,376,091...8,382,640
JBrowse link
G Guca1b guanylate cyclase activator 1B acts_upstream_of_or_within ISO (PMID:15336959) MGI PMID:15336959 NCBI chrNW_004955437:8,384,692...8,390,946
Ensembl chrNW_004955437:8,382,299...8,390,946
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin beta 1 ISO RGD PMID:20705669 RGD:5509896 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:20705669 RGD:5509896 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:12869647 RGD:596992334 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in ISO (PMID:30530489) UniProt PMID:30530489 NCBI chrNW_004955426:116,223...131,798
Ensembl chrNW_004955426:116,514...126,244
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (PMID:30318146) UniProt PMID:30318146 NCBI chrNW_004955456:14,057,517...14,058,729
Ensembl chrNW_004955456:14,057,620...14,058,303
JBrowse link
regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (PMID:27806294) MGI PMID:27806294 NCBI chrNW_004955599:505,725...514,225
Ensembl chrNW_004955599:507,501...514,151
JBrowse link
regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 acts_upstream_of_or_within ISO (PMID:15164767) MGI PMID:15164767 NCBI chrNW_004955452:9,851,182...9,858,735
Ensembl chrNW_004955452:9,846,689...9,861,971
JBrowse link
regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 acts_upstream_of_or_within ISO (PMID:25218477) MGI PMID:25218477 NCBI chrNW_004955457:6,851,542...6,869,452
Ensembl chrNW_004955457:6,851,517...6,872,367
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:11003606) UniProt PMID:11003606 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
ribonucleoside diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak4 adenylate kinase 4 involved_in ISO (PMID:24767988) UniProt PMID:24767988 NCBI chrNW_004955423:25,395,086...25,402,324
Ensembl chrNW_004955423:25,395,836...25,427,474
JBrowse link
ribose phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:2420826) BHF-UCL PMID:2420826 NCBI chrNW_004955580:1,045,294...1,058,129
Ensembl chrNW_004955580:1,045,294...1,057,083
JBrowse link
sphinganine-1-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:10751414), (PMID:19729656) UniProt PMID:10751414 PMID:19729656 NCBI chrNW_004955559:1,921,479...1,929,450
Ensembl chrNW_004955559:1,917,301...1,928,493
JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of ISO (PMID:31880535) MGI PMID:31880535 NCBI chrNW_004955403:9,100,516...9,113,230
Ensembl chrNW_004955403:9,100,516...9,113,223
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of ISO (PMID:31880535) MGI PMID:31880535 NCBI chrNW_004955451:14,621,565...14,627,556
Ensembl chrNW_004955451:14,621,399...14,642,763
JBrowse link
G Osbp oxysterol binding protein involved_in ISO (PMID:12023275) ComplexPortal PMID:12023275 NCBI chrNW_004955511:4,057,514...4,076,039
Ensembl chrNW_004955511:4,057,514...4,076,046
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (PMID:25667419) MGI PMID:25667419 NCBI chrNW_004955577:365,031...443,138
Ensembl chrNW_004955577:367,288...443,138
JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in ISO (PMID:14685263), (PMID:14976195), (PMID:17982138)
(PMID:27892528)
HGNC-UCL
UniProt
PMID:14685263 PMID:14976195 PMID:17982138 PMID:27892528 NCBI chrNW_004955425:5,507,905...5,819,357
Ensembl chrNW_004955425:5,784,751...5,822,488
JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:14685263), (PMID:17982138)
(PMID:25667419)
(PMID:27892528)
UniProt
MGI
PMID:14685263 PMID:17982138 PMID:25667419 PMID:27892528 NCBI chrNW_004955496:1,909,347...1,955,004
Ensembl chrNW_004955496:1,905,517...1,947,009
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within
ISO (PMID:26301690)
(PMID:16216550)
UniProt
MGI
PMID:16216550 PMID:26301690 NCBI chrNW_004955515:57,711...161,012
Ensembl chrNW_004955515:57,711...161,611
JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (PMID:16216550) MGI PMID:16216550 NCBI chrNW_004955438:1,385,431...1,491,534
Ensembl chrNW_004955438:1,385,431...1,491,578
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:12023275) ComplexPortal PMID:12023275 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
succinyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmut methylmalonyl-CoA mutase involved_in ISO (PMID:7904153) MGI PMID:7904153 NCBI chrNW_004955411:8,363,142...8,397,839
Ensembl chrNW_004955411:8,363,142...8,399,216
JBrowse link
thiamine diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc19a2 solute carrier family 19 member 2 involved_in ISO (PMID:8186267) MGI PMID:8186267 NCBI chrNW_004955462:7,786,920...7,804,828
Ensembl chrNW_004955462:7,786,913...7,805,792
JBrowse link
G Slc19a3 solute carrier family 19 member 3 involved_in ISO (PMID:28665968)
(PMID:8186267)
MGI PMID:8186267 PMID:28665968 NCBI chrNW_004955453:6,935,372...6,957,808
Ensembl chrNW_004955453:6,935,371...6,958,103
JBrowse link
G Slc25a19 solute carrier family 25 member 19 involved_in ISO (PMID:17035501)
(PMID:17035501), (PMID:8186267)
MGI PMID:8186267 PMID:17035501 NCBI chrNW_004955553:2,134,715...2,160,777 JBrowse link
G Thtpa thiamine triphosphatase involved_in ISO (PMID:18276586) MGI PMID:18276586 NCBI chrNW_004955409:36,803,721...36,808,094
Ensembl chrNW_004955409:36,804,258...36,808,091
JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 involved_in ISO (PMID:11342111), (PMID:38547260)
(PMID:10567383)
(PMID:38547260)
UniProt
MGI
PMID:10567383 PMID:11342111 PMID:38547260 NCBI chrNW_004955491:621,941...968,570
Ensembl chrNW_004955491:623,530...968,253
JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO (PMID:25678555) MGI PMID:25678555 NCBI chrNW_004955469:9,203,433...9,227,526
Ensembl chrNW_004955469:9,203,434...9,227,865
JBrowse link
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in ISO (PMID:11912132) RGD
MGI
PMID:3010881 PMID:11912132 RGD:5133253 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in ISO (PMID:30449682), (PMID:6249586) MGI PMID:6249586 PMID:30449682 NCBI chrNW_004955484:4,699,743...4,713,466
Ensembl chrNW_004955484:4,699,722...4,713,466
JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO (PMID:2419341)
(PMID:6154574)
MGI PMID:2419341 PMID:6154574 NCBI chrNW_004955427:23,825,529...23,841,427
Ensembl chrNW_004955427:23,825,523...23,841,152
JBrowse link
UDP-D-xylose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uxs1 UDP-glucuronate decarboxylase 1 involved_in ISO (PMID:22810237), (PMID:25521717) UniProt PMID:22810237 PMID:25521717 NCBI chrNW_004955470:10,661,210...10,706,504
Ensembl chrNW_004955470:10,659,520...10,706,269
JBrowse link
UDP-glucuronate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugdh UDP-glucose 6-dehydrogenase involved_in ISO (PMID:32768525)
(PMID:27966912)
MGI
UniProt
PMID:27966912 PMID:32768525 NCBI chrNW_004955443:7,868,893...7,882,136
Ensembl chrNW_004955443:7,868,893...7,882,129
JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in ISO (PMID:32286295) MGI PMID:32286295 NCBI chrNW_004955424:20,444,974...20,490,016
Ensembl chrNW_004955424:20,444,405...20,490,379
JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 involved_in ISO (PMID:35229715)
(PMID:26887390)
FlyBase
UniProt
PMID:26887390 PMID:35229715 NCBI chrNW_004955424:15,692,088...15,739,894
Ensembl chrNW_004955424:15,692,088...15,739,894
JBrowse link
G Gfpt2 glutamine-fructose-6-phosphate transaminase 2 involved_in ISO (PMID:35229715) FlyBase PMID:35229715 NCBI chrNW_004955408:330,112...372,413
Ensembl chrNW_004955408:330,112...372,413
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 involved_in ISO (PMID:26887390) UniProt PMID:26887390 NCBI chrNW_004955415:11,770,111...11,783,430
Ensembl chrNW_004955415:11,770,063...11,784,188
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 involved_in ISO (PMID:26887390) UniProt PMID:26887390 NCBI chrNW_004955443:3,338,300...3,360,561
Ensembl chrNW_004955443:3,338,300...3,360,561
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 involved_in ISO (PMID:11013212) FlyBase PMID:11013212 NCBI chrNW_004955409:10,406,248...10,424,431
Ensembl chrNW_004955409:10,406,723...10,424,431
JBrowse link
G Nagk N-acetylglucosamine kinase involved_in ISO (PMID:34844667) FlyBase PMID:34844667 NCBI chrNW_004955424:14,205,689...14,215,201
Ensembl chrNW_004955424:14,205,813...14,215,156
JBrowse link
G Pgm3 phosphoglucomutase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:24589341)
(PMID:17548465)
UniProt
MGI
PMID:17548465 PMID:24589341 NCBI chrNW_004955411:10,904,022...10,925,613
Ensembl chrNW_004955411:10,904,022...10,924,216
JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umps uridine monophosphate synthetase involved_in ISO (PMID:11730338), (PMID:18184586), (PMID:6893554), (PMID:9042911) RGD
UniProt
PMID:6134725 PMID:6893554 PMID:9042911 PMID:11730338 PMID:18184586 RGD:5132277 NCBI chrNW_004955427:23,825,529...23,841,427
Ensembl chrNW_004955427:23,825,523...23,841,152
JBrowse link
G Uprt uracil phosphoribosyltransferase homolog ISO RGD PMID:1476792 RGD:5132591 NCBI chrNW_004955562:1,385,617...1,415,277
Ensembl chrNW_004955562:1,385,611...1,415,336
JBrowse link
UMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase involved_in ISO (PMID:6498945) MGI PMID:6498945 NCBI chrNW_004955452:1,131,968...1,156,777
Ensembl chrNW_004955452:1,132,049...1,156,565
JBrowse link
G Uck1 uridine-cytidine kinase 1 involved_in ISO (PMID:11306702)
(PMID:8951040)
UniProt
MGI
PMID:8951040 PMID:11306702 NCBI chrNW_004955513:1,203,934...1,208,720
Ensembl chrNW_004955513:1,203,934...1,208,724
JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in ISO (PMID:11306702), (PMID:27239701) MGI PMID:11306702 PMID:27239701 NCBI chrNW_004955462:10,815,496...10,925,364
Ensembl chrNW_004955462:10,815,389...10,886,227
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (PMID:11956089) MGI PMID:11956089 NCBI chrNW_004955456:5,365,912...5,385,336
Ensembl chrNW_004955456:5,365,877...5,385,336
JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chrNW_004955469:9,203,433...9,227,526
Ensembl chrNW_004955469:9,203,434...9,227,865
JBrowse link
xylulose 5-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tkt transketolase involved_in ISO (PMID:5360673) MGI PMID:5360673 NCBI chrNW_004955430:3,178,830...3,193,241
Ensembl chrNW_004955430:3,178,830...3,193,345
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12619
    cellular process 12054
      metabolic process 7963
        biosynthetic process 5539
          organophosphate biosynthetic process 402
            1-deoxy-D-xylulose 5-phosphate biosynthetic process 0
            D-glycero-D-manno-heptose 7-phosphate biosynthetic process 0
            carbamoyl phosphate biosynthetic process 1
            coenzyme gamma-F420-2 biosynthetic process 0
            cyclic 2,3-bisphospho-D-glycerate biosynthetic process 0
            deoxyribose phosphate biosynthetic process + 14
            glyceraldehyde-3-phosphate biosynthetic process 4
            glycerol-3-phosphate biosynthetic process 2
            inositol phosphate biosynthetic process + 26
            methanopterin-containing compound biosynthetic process + 0
            molybdopterin cofactor biosynthetic process + 5
            nucleoside phosphate biosynthetic process + 202
            phosphagen biosynthetic process + 2
            phospholipid biosynthetic process + 158
            psilocybin biosynthetic process 0
            pyridoxal phosphate biosynthetic process + 2
            ribose phosphate biosynthetic process + 103
            thiamine diphosphate biosynthetic process + 5
            xylulose 5-phosphate biosynthetic process + 4
Path 2
Term Annotations click to browse term
  biological_process 12619
    cellular process 12054
      metabolic process 7963
        phosphorus metabolic process 1923
          organophosphate metabolic process 782
            organophosphate biosynthetic process 402
              1-deoxy-D-xylulose 5-phosphate biosynthetic process 0
              D-glycero-D-manno-heptose 7-phosphate biosynthetic process 0
              carbamoyl phosphate biosynthetic process 1
              coenzyme gamma-F420-2 biosynthetic process 0
              cyclic 2,3-bisphospho-D-glycerate biosynthetic process 0
              deoxyribose phosphate biosynthetic process + 14
              glyceraldehyde-3-phosphate biosynthetic process 4
              glycerol-3-phosphate biosynthetic process 2
              inositol phosphate biosynthetic process + 26
              methanopterin-containing compound biosynthetic process + 0
              molybdopterin cofactor biosynthetic process + 5
              nucleoside phosphate biosynthetic process + 202
              phosphagen biosynthetic process + 2
              phospholipid biosynthetic process + 158
              psilocybin biosynthetic process 0
              pyridoxal phosphate biosynthetic process + 2
              ribose phosphate biosynthetic process + 103
              thiamine diphosphate biosynthetic process + 5
              xylulose 5-phosphate biosynthetic process + 4
paths to the root