Nampt (nicotinamide phosphoribosyltransferase) - Rat Genome Database

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Gene: Nampt (nicotinamide phosphoribosyltransferase) Chinchilla lanigera
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Symbol: Nampt
Name: nicotinamide phosphoribosyltransferase
RGD ID: 8995866
Description: ENCODES a protein that exhibits cytokine activity (ortholog); heterocyclic compound binding (ortholog); identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); aging (ortholog); cellular response to amyloid-beta (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); carotid artery disease (ortholog); colitis (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); nuclear speck (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541010,717,664 - 10,751,177 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541010,717,664 - 10,742,109 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Nampt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541010,717,664 - 10,751,177 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541010,717,664 - 10,742,109 (-)NCBIChiLan1.0ChiLan1.0
NAMPT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387106,248,298 - 106,285,888 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl7106,248,298 - 106,285,966 (-)EnsemblGRCh38hg38GRCh38
GRCh377105,888,744 - 105,925,429 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367105,675,967 - 105,712,874 (-)NCBINCBI36hg18NCBI36
Build 347105,495,899 - 105,519,318NCBI
Celera7100,694,260 - 100,731,169 (-)NCBI
Cytogenetic Map7q22.3NCBI
HuRef7100,248,062 - 100,285,253 (-)NCBIHuRef
CHM1_17105,822,212 - 105,859,137 (-)NCBICHM1_1
CRA_TCAGchr7v27105,249,752 - 105,286,646 (-)NCBI
Nampt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391232,870,334 - 32,903,368 (+)NCBIGRCm39mm39
GRCm39 Ensembl1232,869,544 - 32,903,348 (+)Ensembl
GRCm381232,820,335 - 32,853,369 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1232,819,545 - 32,853,349 (+)EnsemblGRCm38mm10GRCm38
MGSCv371233,505,200 - 33,538,234 (+)NCBIGRCm37mm9NCBIm37
MGSCv361233,405,722 - 33,436,855 (+)NCBImm8
Celera1234,264,778 - 34,297,952 (+)NCBICelera
Cytogenetic Map12A3NCBI
Nampt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2649,425,316 - 49,462,109 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl649,424,332 - 49,462,100 (+)Ensembl
Rnor_6.0652,122,085 - 52,156,473 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl652,122,085 - 52,156,472 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0661,753,125 - 61,787,575 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4651,129,160 - 51,166,514 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1651,132,285 - 51,169,639 (+)NCBI
Celera648,619,485 - 48,654,540 (+)NCBICelera
Cytogenetic Map6q16NCBI
NAMPT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.17110,952,876 - 110,989,233 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0798,227,071 - 98,262,254 (-)NCBIMhudiblu_PPA_v0panPan3
NAMPT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11814,110,045 - 14,211,268 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1813,993,022 - 14,208,657 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1813,815,825 - 13,860,578 (+)NCBI
ROS_Cfam_1.01814,441,923 - 14,486,695 (+)NCBI
ROS_Cfam_1.0 Ensembl1814,441,184 - 14,486,688 (+)Ensembl
UMICH_Zoey_3.11814,254,107 - 14,298,642 (+)NCBI
UNSW_CanFamBas_1.01814,175,231 - 14,219,981 (+)NCBI
UU_Cfam_GSD_1.01814,455,285 - 14,500,038 (+)NCBI
Nampt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511856,558,385 - 56,593,898 (+)NCBI
SpeTri2.0NW_00493647917,682,070 - 17,716,713 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAMPT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9106,119,899 - 106,294,587 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19106,119,896 - 106,162,126 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29116,889,082 - 116,932,047 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NAMPT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12175,160,748 - 75,195,781 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2175,158,596 - 75,196,025 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604228,713,073 - 28,750,454 (+)NCBIVero_WHO_p1.0
Nampt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473923,411,478 - 23,444,590 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000007194   ⟹   ENSCLAP00000007082
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541010,717,664 - 10,742,113 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000007195   ⟹   ENSCLAP00000007083
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541010,720,305 - 10,751,177 (-)Ensembl
RefSeq Acc Id: XM_013510535   ⟹   XP_013365989
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541010,717,664 - 10,742,109 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013365989 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013365989   ⟸   XM_013510535
- Sequence:
RefSeq Acc Id: ENSCLAP00000007082   ⟸   ENSCLAT00000007194
RefSeq Acc Id: ENSCLAP00000007083   ⟸   ENSCLAT00000007195


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000004981 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000007082 ENTREZGENE, UniProtKB/TrEMBL
  ENSCLAP00000007083 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000007194 ENTREZGENE, UniProtKB/TrEMBL
  ENSCLAT00000007195 UniProtKB/TrEMBL
NCBI Gene Nampt ENTREZGENE
UniProt A0A8C2UY20_CHILA UniProtKB/TrEMBL
  A0A8C2V3I9_CHILA UniProtKB/TrEMBL