Pgm3 (phosphoglucomutase 3) - Rat Genome Database

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Gene: Pgm3 (phosphoglucomutase 3) Chinchilla lanigera
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Symbol: Pgm3
Name: phosphoglucomutase 3
RGD ID: 8728347
Description: ENCODES a protein that exhibits phosphoacetylglucosamine mutase activity (ortholog); phosphoglucomutase activity (ortholog); INVOLVED IN glucose 1-phosphate metabolic process (ortholog); hemopoiesis (ortholog); protein N-linked glycosylation (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; glycogen biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); hyper IgE syndrome (ortholog); immunodeficiency 23 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: phosphoacetylglucosamine mutase
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541110,904,022 - 10,924,216 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541110,904,022 - 10,925,613 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References


Genomics

Comparative Map Data
Pgm3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541110,904,022 - 10,924,216 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541110,904,022 - 10,925,613 (-)NCBIChiLan1.0ChiLan1.0
PGM3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl683,161,150 - 83,193,936 (-)EnsemblGRCh38hg38GRCh38
GRCh38683,150,728 - 83,193,900 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37683,860,447 - 83,903,619 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36683,935,347 - 83,959,654 (-)NCBINCBI36hg18NCBI36
Celera684,311,934 - 84,336,241 (-)NCBI
Cytogenetic Map6q14.1NCBI
HuRef681,102,841 - 81,131,905 (-)NCBIHuRef
CHM1_1683,972,285 - 84,001,348 (-)NCBICHM1_1
Pgm3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39986,423,997 - 86,453,927 (-)NCBIGRCm39mm39
GRCm39 Ensembl986,436,430 - 86,453,895 (-)Ensembl
GRCm38986,552,476 - 86,571,878 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl986,554,377 - 86,571,842 (-)EnsemblGRCm38mm10GRCm38
MGSCv37986,446,083 - 86,465,449 (-)NCBIGRCm37mm9NCBIm37
MGSCv36986,349,194 - 86,368,545 (-)NCBImm8
Celera983,629,204 - 83,648,570 (-)NCBICelera
Cytogenetic Map9E3.1NCBI
cM Map946.58NCBI
Pgm3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2887,517,931 - 87,536,034 (-)NCBI
Rnor_6.0 Ensembl894,225,515 - 94,243,215 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0894,225,513 - 94,243,230 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0893,738,656 - 93,756,367 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4891,810,223 - 91,827,293 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1891,828,427 - 91,845,308 (-)NCBI
Celera887,122,461 - 87,139,531 (-)NCBICelera
Cytogenetic Map8q31NCBI
PGM3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1684,336,092 - 84,364,515 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl684,336,092 - 84,364,515 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0681,062,356 - 81,090,215 (-)NCBIMhudiblu_PPA_v0panPan3
PGM3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11243,582,472 - 43,611,583 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1243,584,940 - 43,611,777 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1243,398,757 - 43,424,981 (-)NCBI
ROS_Cfam_1.01244,352,674 - 44,378,899 (-)NCBI
UMICH_Zoey_3.11243,692,121 - 43,718,325 (-)NCBI
UNSW_CanFamBas_1.01243,640,874 - 43,667,265 (-)NCBI
UU_Cfam_GSD_1.01243,801,971 - 43,828,223 (-)NCBI
Pgm3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494678,848,275 - 78,884,092 (-)NCBI
SpeTri2.0NW_0049365107,586,817 - 7,622,586 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PGM3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl183,003,655 - 83,029,899 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1183,003,622 - 83,029,392 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2193,255,151 - 93,280,921 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PGM3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1137,841,724 - 7,871,013 (-)NCBI
ChlSab1.1 Ensembl137,844,765 - 7,871,002 (-)Ensembl
Pgm3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479911,395,465 - 11,423,878 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000016459   ⟹   ENSCLAP00000016295
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541110,904,022 - 10,924,216 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000016460   ⟹   ENSCLAP00000016296
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541110,904,308 - 10,923,815 (-)Ensembl
RefSeq Acc Id: XM_013510758   ⟹   XP_013366212
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541110,904,022 - 10,925,613 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013366212 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013366212   ⟸   XM_013510758
- Sequence:
RefSeq Acc Id: ENSCLAP00000016296   ⟸   ENSCLAT00000016460
RefSeq Acc Id: ENSCLAP00000016295   ⟸   ENSCLAT00000016459


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011213 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000016295 ENTREZGENE
Ensembl Transcript ENSCLAT00000016459 ENTREZGENE
NCBI Gene Pgm3 ENTREZGENE