Gnpnat1 (glucosamine-phosphate N-acetyltransferase 1) - Rat Genome Database

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Gene: Gnpnat1 (glucosamine-phosphate N-acetyltransferase 1) Chinchilla lanigera
Analyze
Symbol: Gnpnat1
Name: glucosamine-phosphate N-acetyltransferase 1
RGD ID: 8811176
Description: ENCODES a protein that exhibits glucosamine 6-phosphate N-acetyltransferase activity (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glucosamine metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); RHIZOMELIC DYSPLASIA, AIN-NAZ TYPE (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); late endosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: glucosamine 6-phosphate N-acetyltransferase
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540910,406,723 - 10,424,431 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540910,406,248 - 10,424,431 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations

Genomics

Comparative Map Data
Gnpnat1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540910,406,723 - 10,424,431 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540910,406,248 - 10,424,431 (+)NCBIChiLan1.0ChiLan1.0
GNPNAT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381452,775,193 - 52,791,607 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1452,775,193 - 52,791,668 (-)EnsemblGRCh38hg38GRCh38
GRCh371453,241,911 - 53,258,325 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361452,311,661 - 52,328,133 (-)NCBINCBI36hg18NCBI36
Build 341452,311,661 - 52,328,133NCBI
Celera1433,291,588 - 33,308,063 (-)NCBI
Cytogenetic Map14q22.1NCBI
HuRef1433,402,899 - 33,420,411 (-)NCBIHuRef
CHM1_11453,180,808 - 53,197,284 (-)NCBICHM1_1
T2T-CHM13v2.01446,982,987 - 46,999,402 (-)NCBI
Gnpnat1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391445,613,878 - 45,626,444 (-)NCBIGRCm39mm39
GRCm39 Ensembl1445,613,791 - 45,642,370 (-)Ensembl
GRCm381445,376,421 - 45,388,987 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1445,376,334 - 45,404,913 (-)EnsemblGRCm38mm10GRCm38
MGSCv371445,996,096 - 46,008,471 (-)NCBIGRCm37mm9NCBIm37
MGSCv361444,298,298 - 44,310,673 (-)NCBImm8
Celera1441,556,350 - 41,568,784 (-)NCBICelera
Cytogenetic Map14C1NCBI
Gnpnat1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21518,596,180 - 18,608,854 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1518,596,442 - 18,608,739 (-)Ensembl
Rnor_6.01519,721,292 - 19,734,032 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,721,293 - 19,733,967 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,685,448 - 23,698,244 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41521,272,165 - 21,284,459 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1519,024,815 - 19,037,109 (-)NCBICelera
Cytogenetic Map15p14NCBI
GNPNAT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11451,655,182 - 51,671,617 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1451,655,182 - 51,671,619 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01433,371,603 - 33,388,098 (-)NCBIMhudiblu_PPA_v0panPan3
GNPNAT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1828,992,173 - 29,005,511 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl828,993,227 - 29,005,435 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha828,736,462 - 28,749,813 (-)NCBI
ROS_Cfam_1.0829,158,602 - 29,171,970 (-)NCBI
ROS_Cfam_1.0 Ensembl829,158,609 - 29,171,982 (-)Ensembl
UMICH_Zoey_3.1828,832,502 - 28,845,853 (-)NCBI
UNSW_CanFamBas_1.0828,904,894 - 28,918,244 (-)NCBI
UU_Cfam_GSD_1.0829,233,507 - 29,247,101 (-)NCBI
Gnpnat1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864076,301,693 - 76,312,369 (+)NCBI
SpeTri2.0NW_0049366972,079,396 - 2,087,602 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GNPNAT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1182,407,229 - 182,423,441 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11182,404,460 - 182,423,453 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21202,680,394 - 202,694,010 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GNPNAT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12429,862,903 - 29,878,050 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2429,863,956 - 29,878,135 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605318,134,030 - 18,149,747 (-)NCBIVero_WHO_p1.0
Gnpnat1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,334,344 - 16,346,107 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462473116,334,347 - 16,346,107 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000013014   ⟹   ENSCLAP00000012865
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540910,406,723 - 10,424,431 (+)Ensembl
RefSeq Acc Id: XM_005376776   ⟹   XP_005376833
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540910,406,248 - 10,424,431 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005376777   ⟹   XP_005376834
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540910,407,046 - 10,424,418 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005376833 (Get FASTA)   NCBI Sequence Viewer  
  XP_005376834 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005376833   ⟸   XM_005376776
- Sequence:
RefSeq Acc Id: XP_005376834   ⟸   XM_005376777
- Sequence:
RefSeq Acc Id: ENSCLAP00000012865   ⟸   ENSCLAT00000013014
Protein Domains
N-acetyltransferase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008884 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000012865 ENTREZGENE
  ENSCLAP00000012865.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000013014 ENTREZGENE
  ENSCLAT00000013014.1 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GNAT_dom UniProtKB/TrEMBL
  GNPNAT1 UniProtKB/TrEMBL
NCBI Gene Gnpnat1 ENTREZGENE
PANTHER PTHR13355 UniProtKB/TrEMBL
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PROSITE GNAT UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/TrEMBL
UniProt A0A8C2YP31_CHILA UniProtKB/TrEMBL