Gars1 (glycyl-tRNA synthetase 1) - Rat Genome Database
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Gene: Gars1 (glycyl-tRNA synthetase 1) Chinchilla lanigera
Analyze
Symbol: Gars1
Name: glycyl-tRNA synthetase 1
RGD ID: 8959500
Description: ENCODES a protein that exhibits bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (ortholog); glycine-tRNA ligase activity (ortholog); identical protein binding (ortholog); INVOLVED IN diadenosine tetraphosphate biosynthetic process (ortholog); glycyl-tRNA aminoacylation (ortholog); tRNA aminoacylation for protein translation (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy (ortholog); axonal neuropathy (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); extracellular exosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: Gars; glycine--tRNA ligase; glycyl-tRNA synthetase
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541031,779,543 - 31,819,113 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541031,778,654 - 31,819,287 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References


Genomics

Comparative Map Data
Gars1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541031,779,543 - 31,819,113 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541031,778,654 - 31,819,287 (+)NCBIChiLan1.0ChiLan1.0
GARS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl730,594,838 - 30,634,033 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl730,580,533 - 30,634,033 (+)EnsemblGRCh38hg38GRCh38
GRCh38730,594,735 - 30,634,033 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37730,634,351 - 30,673,649 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36730,600,706 - 30,640,174 (+)NCBINCBI36hg18NCBI36
Build 34730,407,420 - 30,446,884NCBI
Celera730,623,360 - 30,662,827 (+)NCBI
Cytogenetic Map7p14.3NCBI
HuRef730,516,030 - 30,555,489 (+)NCBIHuRef
CHM1_1730,634,608 - 30,673,905 (+)NCBICHM1_1
CRA_TCAGchr7v2730,683,834 - 30,723,301 (+)NCBI
Gars
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39655,014,986 - 55,056,489 (+)NCBIGRCm39mm39
GRCm39 Ensembl655,014,992 - 55,056,485 (+)Ensembl
GRCm38655,038,001 - 55,079,504 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl655,038,007 - 55,079,500 (+)EnsemblGRCm38mm10GRCm38
MGSCv37654,987,995 - 55,029,498 (+)NCBIGRCm37mm9NCBIm37
MGSCv36654,967,598 - 55,009,078 (+)NCBImm8
Celera655,573,683 - 55,614,743 (+)NCBICelera
Cytogenetic Map6B3NCBI
cM Map627.29NCBI
Gars
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2484,171,596 - 84,212,609 (+)NCBI
Rnor_6.0 Ensembl485,235,172 - 85,276,044 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0485,235,122 - 85,276,085 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04149,884,600 - 149,933,329 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4483,718,584 - 83,759,591 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1484,123,817 - 84,165,539 (-)NCBI
Celera479,038,903 - 79,079,749 (+)NCBICelera
Cytogenetic Map4q24NCBI
GARS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1731,329,572 - 31,368,719 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl731,329,456 - 31,368,582 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0731,208,351 - 31,247,841 (+)NCBIMhudiblu_PPA_v0panPan3
GARS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1443,308,152 - 43,396,487 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11443,308,274 - 43,351,999 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Gars1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364786,848,448 - 6,889,103 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GARS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1842,311,576 - 42,352,162 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11842,311,711 - 42,352,201 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21846,675,442 - 46,768,505 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GARS1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12127,750,532 - 27,791,143 (-)NCBI
ChlSab1.1 Ensembl2127,749,514 - 27,790,881 (-)Ensembl
Gars1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624739172,111 - 211,229 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000011724   ⟹   ENSCLAP00000011587
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541031,779,543 - 31,819,113 (+)Ensembl
RefSeq Acc Id: XM_005377501   ⟹   XP_005377558
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541031,778,654 - 31,819,287 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005377558 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005377558   ⟸   XM_005377501
- Sequence:
RefSeq Acc Id: ENSCLAP00000011587   ⟸   ENSCLAT00000011724


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000007985 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000011587 ENTREZGENE
Ensembl Transcript ENSCLAT00000011724 ENTREZGENE
NCBI Gene Gars ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-07-23 Gars1  glycyl-tRNA synthetase 1  Gars  glycyl-tRNA synthetase  Symbol and/or name change 5135510 APPROVED