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Gene: Pdxk (pyridoxal kinase) Chinchilla lanigera

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Symbol:

Pdxk

Name:

pyridoxal kinase

RGD ID:

8918779

Description:

ENCODES a protein that exhibits phosphotransferase activity, alcohol group as acceptor (ortholog); pyridoxal binding (ortholog); pyridoxal kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); pyridoxal metabolic process (ortholog); pyridoxal phosphate biosynthetic process (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

pyridoxal (pyridoxine, vitamin B6) kinase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PDXK (pyridoxal kinase)	NCBI	Ortholog
Mus musculus (house mouse):	Pdxk (pyridoxal (pyridoxine, vitamin B6) kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Pdxk (pyridoxal kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PDXK (pyridoxal kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pdxk (pyridoxal kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PDXK (pyridoxal kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pdxk (pyridoxal kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PDXK (pyridoxal kinase)	NCBI	Ortholog

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	41,482,216 - 41,494,177 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955407	41,482,216 - 41,494,174 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of apoptotic process (ISO)

pyridoxal metabolic process (ISO)

pyridoxal phosphate biosynthetic process (ISO)

pyridoxal phosphate metabolic process (ISO)

pyridoxamine metabolic process (ISO)

response to amine (ISO)

response to food (ISO)

response to insecticide (ISO)

response to progesterone (ISO)

response to toxic substance (ISO)

response to X-ray (ISO)

response to xenobiotic stimulus (ISO)

Cellular Component

cytosol (ISO)

Molecular Function

phosphotransferase activity, alcohol group as acceptor (ISO)

pyridoxal binding (ISO)

pyridoxal kinase activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

hypophosphatasia pathway (ISO)

vitamin B6 metabolic pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Pdxk
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	41,482,216 - 41,494,177 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955407	41,482,216 - 41,494,174 (-)	NCBI	ChiLan1.0	ChiLan1.0

PDXK
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	43,737,000 - 43,738,097 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	43,719,094 - 43,762,307 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	45,138,978 - 45,182,188 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	43,963,406 - 44,006,616 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	21	43,963,405 - 44,006,608	NCBI
Celera	21	30,244,819 - 30,287,780 (+)	NCBI		Celera
Cytogenetic Map	21	q22.3	NCBI
HuRef	21	30,506,765 - 30,550,585 (+)	NCBI		HuRef
CHM1_1	21	44,717,696 - 44,718,791 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	21	42,092,543 - 42,093,640 (+)	NCBI		T2T-CHM13v2.0

Pdxk
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	78,272,581 - 78,300,782 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	78,272,578 - 78,300,809 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	78,436,747 - 78,464,948 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	78,436,744 - 78,464,975 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	77,899,492 - 77,927,693 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	77,842,099 - 77,868,104 (-)	NCBI		MGSCv36	mm8
Celera	10	79,458,844 - 79,487,046 (-)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	39.72	NCBI

Pdxk
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	10,209,975 - 10,232,012 (+)	NCBI		GRCr8
mRatBN7.2	20	10,210,276 - 10,232,314 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	10,210,289 - 10,232,110 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	10,909,956 - 10,931,608 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	10,270,865 - 10,292,517 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	10,742,295 - 10,763,997 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	10,930,651 - 10,952,194 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	10,930,518 - 10,952,391 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	13,102,429 - 13,123,972 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	10,541,656 - 10,563,199 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	10,541,882 - 10,563,426 (+)	NCBI
Celera	20	11,721,159 - 11,742,702 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

PDXK
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	39,727,200 - 39,771,206 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	34,577,814 - 34,621,766 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	29,977,286 - 30,021,266 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	43,276,660 - 43,319,866 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	43,273,237 - 43,313,637 (+)	Ensembl	panpan1.1		panPan2

Pdxk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	36,928,712 - 36,956,834 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	509,510 - 529,455 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	510,977 - 539,166 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PDXK
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	87,489,249 - 87,534,376 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	87,489,315 - 87,531,621 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	15,561,891 - 15,606,396 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pdxk
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624745	30,157,446 - 30,175,803 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624745	30,157,446 - 30,175,905 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013505430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01007869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01073643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01008497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000007196 ⟹ ENSCLAP00000007084

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955407	41,482,216 - 41,494,177 (-)	Ensembl

RefSeq Acc Id:

XM_013505430 ⟹ XP_013360884

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955407	41,482,216 - 41,494,174 (-)	NCBI

Sequence:

show sequence

CCCTCCGCGGCGCGCGCTGAGGTCAGAGGCGGCGGCGGATCCCCGAGCGCCTGCGCGCCGCAGC
CGCAGCCGAGCCCGAGCGGAGCCGCCGCGCAGCCCGCCGCCCGGCATGGAGGGGGACTGCCGCG
TGCTGTCCATCCAGAGCCACGTCGTCCGCGGCTACGTGGGCAACCGGGCGGCCACGTTCCCGCT
GCAGGTCCTCGGGTTTGAGATCGACGCAGTGAACTCCGTCCAGTTTTCCAACCACACAGGCTAC
GCGCACTGGAGCGGCCAGGTGCTGAACTCCAGTGAGCTCCAGGAGCTGTACGAAGGCCTGAAGC
TCAACGGCGTGAACAAGTATGACTACGTGCTCACGGGGTACACGAGGGACGCATCCTTCCTGTC
CATGGTGGTGGACATCGTGCAGGAGCTGAAGCAGCAGAACTCACGGCTCGTGTACGTGTGCGAT
CCCGTGATGGGCGACAAGTGGGACGGCGAGGGCCGCATGTACGTCCCCGAGGACCTCCTTCCCG
TGTACCGAGAAAAGGTGGTGCCGGTGGCGGACATCATAACCCCCAACCAGTTCGAAGCCGAGTT
GCTGAGCGGCAGGAAGATCCGCAGCCAGGAGGAGGCGCTGGCGGTGATGGACGTGCTGCACTCC
ATGGGCCCTGACACTGTGGTCATCACCAGCTCCGACCTGCCCTCCCCTAGGGGCAGCGACTACC
TGATTGCGCTGGGCAGCCAGAGGACACGGAGGCCTGACGGCTCCACGGTGACACAGCGTATCCG
CATGGAGATGCGCAAGGTGGACGCCGTCTTCGTGGGCACCGGGGACCTCTTCGCCGCCATGCTG
CTCGCGTGGACACACAAGCACCCCGACAATCTCAAGGTGGCCTGTGAGAAGACTGTGTCAGCCA
TGCACCACGTTCTGCAGAGGACCATCCGGTGTGCCCAAGCCCAGGCTGGGGAAGGACGGAAGCC
CAGCCCGGCCCAGCTAGAGCTGAGGATGGTCCAGAGCAAGAAGGACATTGAGGACCCCGAGATC
GTCGTCCAGGCCACCGTGCTGTGAGGGCTGTGCGTGCGCACGCCTGCCCGACACCCACAGCCTG
GTGTCTCCGTCTCGTCCCTGTGAAACCTGTAACGTCTGCCTTAGAGCCTGACCGAAGCCCAACA
TTCGTCCCCTCGTGAGTGCCGGGTGTCGCCCGTCTCTGTCGTGAAAACGTGCCAGTCGTCCCTG
CTACAGAAGCACAAGGCAGCCTGGAACGTGGTGACGTGACGCGGGCCCTCCCCAGGCCCCAGGC
TCAGGTGTCCTGCGTGGGTGGTGGCCCCTGGTGGCAGTGGCTGGCCCGCTGCCCTGCAGACCCT
GGCATGGGGCCACTGGCTGCCGTGGCCGCACAGAGCCCTCCCACACAGGCTGCCGGGTGACCTC
TGATGTCAAGCGGCGTCTGGAAGGATCACGCCAACCCCTGTGCTGTCGCCCTGGTCTCCGCCTC
TGTGTTCCTGCGTTAGAGTCCGTGTCGTCATCTGCTGCCCCTTGGGTGTTGGAGGTCCCCCAGT
ATGCAGCCGCTGGACCATGCAGGAGCTTCCGGTCTGCACGCTCAGGTGCACCAAGGTGTGATCA
CCACCATGGGGCCTTTCTGGAGCCCCGCGTCCCATCGGTCTGCAGACCTCACAGGATGCAGCGG
GACTTCGTGTGACTGGGGAGCAACTTGTAGGGACCTGCCTGCACCGAGAGGGACGTGCTGATGT
GATGAGGGCAGCCGGGGAGGCCCCCACACTGGGCTGCCTGGGGGAACTTGGGTGCAGGCCGGCG
GGCACCGTGCCTGTCACACACTGCTGGTGACAGAGCACTGAGCAGGATGGAGTGTGCACCGGCA
GGGACGGGACAGGTGGCACCTGCTCCCGATGACTGCTGAGACCTTGCCCTGTCTCCCTCCCGCG
CTGGAGCCAGCTCCAGCCGTGTCCCTGTCCCAGTCGCAGTCACCAGGGCACGGCTGTGTGTGAG
GTGCAAAGGTTGCTCTCCTGGGAGCGCCCACCTGCAGAGCAGTGGGGCCAGTGGGGCCAGCAGG
TGCCCAGGTCCCTGCTCCGCGTCCTGGGCCTCCCTTGCTGGGGATGGGGCTCTGGAGCTTGCCG
CACGCCAGTCAGGGCCACAGCAGTGCTCCCTGGCCAGGCCCTCGGCCCCAGCGTGCACAGGTGA
TTCCCTCTGAGCCTGGGACGGAGGAGCAGCTGGGGAGGGGAAGGCGGGCCGGGTGCCGGGCAGG
GCGGGGCAGCAGCGCCCCTCTGTCCCTCTTGTTCTTTCTGCTATCTGTCGTCCTCCCTCTTCCT
CTTTTCCTCTCTTTGCGCACAGAGAGTGACTGTGGCACCGTCCTGGGGGCACACAGTAGGTGTG
GGGACAGGCGCGATGTACTGGTCCCTGAGGGCAGGGCCCTGTCTGATGCCAGGTCTCTTAAGCC
TTGTTCCCATGTCACACACAGAGGACAAGTTCCCCTCTCGAGAGCTTCAGGTGGAGCCGTGAAC
TCGGGCTCTGCCGGAAGCTGCTGATTTCCTTGGCTGTGTGTCCTGGAAGACGGAGCAGGAGGGA
CTCAGGCCTCAGAGGACAGCTTGGGTCTCCGAGCCTCTGAGAGCCAGGGACCTGGGCAGGAACA
GTGTTAGGGACGGGAGTGCAGCCCCATGGGCAGCCCTGCCCAGCACCACACCCAGAAGATGGGC
GGAACTCAGGCGTGCACTCCCTTAGAAGCGGCGTCCACCTGTCCCCGTCCCGCTCTGCCTGTGG
GCTCTTTCACATGGCAGCGCTGAGGTCCCGGCTCCCCTGGACTCCCTCGGGCTTGTTTCCACAG
GACAGTGTGGGGTCCACACGCAGTTTGCCACCCAGGAGGCCGCGGGCGCTGATAGTGGTTGTGG
ACACAGCTTGGATCCAGATCAGAATCATCCTTTGCTTTTACTGTCCATGGTGACACACAAAAGA
GTATAACTTATCTTGAAATGAGAGCTCTCTCAGCCCCTGTTGCCTGCTTATTCTTAGGAGACAG
GATTTTAATACTTTCTTAATCCAGACCGTAGGAAGGAACTAATGAATATGGTCTTTTTTAATCA
ATTTTAAATCATCGCCTCATCCTGCCCAGGTAACTGCGCCTCAACCGATGCTTTTCCACTTTTA
GTCTCGGTCAGTGATTGCAAGCAGGACGCTTCGTTTCCTGTCCTGTTCTTAAAGTTGTTGGAAC
CAGTTTTCAAAACACTTAACTGTACAGTGGACCAAGCAGGCTCAGCCTTGTGCACTGCCCGGTG
AAAGAGGCTGCTTTGCAGCGGAGGGCGGCCTGCAGTGCCGGGCACCCCGCCCCGTCCCGTCAGT
GCCCGTGTCGGAGCTCGGGTCTCGCTGTCACTGAGGGAGGCCGGCCTCGGGAGGGAGGCTGCTT
GGTTGCCGGCTCTGGGCAGCTCCTGACGCCTTGGGTCAGCCTTGTGTCCTCTCTTCCTGGACAA
AGCACAGGATCAGGAGGTGACAGCACTCTGGCTCCTGGAACCCTTCCCCGTGTCCTCCCTGCCC
TTTCACAGGGTTACCTGCTTGGGGACATTGGGTCCCCATCCATGCTGCTCTGAGGTATCCCGGG
ACCAGCTGCTCCCCTGGGCCTCTGTCCTGTCCCTGTCCTTGGGGCCAGAAAAAGGGGCTGGCGC
TTGAGGCGGAGAGCACAGAGCGCTGGTGTGGCTTCTTGGGGCTCCCTCTGCCCCCGGGGTGTCG
TCCCGGAGGTCCTTGGCACCTCCCACTGCCACGCAGAAGAGCCCCCGAGTTCGGCACAGAGCTG
CATGGGAAGACCCCGGGAAAGCGGGCGGGGGGGTGGGTCGGCCTCCAGGAGGCCGGGCCCTCGG
TGTGCAGGTCCCGCGTGAGCTCCTGGCCAGGGAAACCTTGAACTTGGGCATGAGGGGTGCAGGA
TCGTGGGTCTTTCCCTAACTCTGGTTTCTCTTGCTGTGCACTTCCGGCCCCACCAGCGGGGGCG
CCATGAGCCCAGAGGTGGGTGAGGCGGAGCTGGGTCCCTGGCCCACCTGGTAGATTTGCCCTCT
GCTGCCCTTCTTGGGGACTTTGGAAATGTTTGTTGTTTTTGTTTTGCCTTTTGCAGTACCAAGG
GTGAACCGAGGGAGCACAGAGCTACACCCTAGCACCCACTGAATGTTTTGCTGGGACCCCCAGG
CTGGCCTTGAACTTGCGGACCTCCTGAGTGTGCCTGTGGCCATGTGTGTGCGGGAGACTGTCTA
GGTTTTTAGTGTGAATTCTTCTGTGTCCCCAAGCTGCACTCTGAGCCGGCGCGTGCTCCCCTCA
CCCCCTTGGTGTGTCCCCTCGGCCCCGGAGGCCCTGCCTGCTCACCACCGGGGCCCCTTGCCCA
CCGGGCTCTGTTCGTGGCACTGCTCTCTGCTCTCCATGCACAAAGCCTGGCGACAGCGGGTCTC
ACACCCCAGTCGCCGTGTGGTGCAGCCGCTGCGCTCTCTGCTCGGGAGGTGGGGCTGACAGTGA
AACTGAAATCTCCGGTGAATGAAAGTTGTAGGGCCTAGAGGTGTTTTTATTTTTTAATTGTCTG
AAGATACAAAGTGTTTAAAAAGATCCCAGCTGCCTGACCCAAGCGGGCCGTCTTCGCGCAGGAC
CCCAGGCCGTGTGGTGACCGGGCCTCTCCCCTCCCCCAGCTCCCTACGGCTGTTTCTCGTCTTC
TTGCAACTGGACAGCACCTTGGGTGGGAAAGGCCTTCCCTAGCCAGGGGCATGCACCTGGCCAG
TGGCACGGCTCTGCAGCAGCCATGCGGAAGCTGGTCCGGGGCAGAGGTGAGCGGCAGCACCCGT
CCCTGCCTGGATCCGTGGCTCCTGAGGCCCTGCGCTGTGTTGTCACATGGGACTCAGCTCGGCC
GAGGAGCTTGTGTGCTGGGGCTTCCGGACAGGAAGTGGAGTCTGCCGGTGTGCCAGATCCTGCT
GGTGTGTCCCGGGGGCACAGCCGGGGCGGGCGAGTTCCACAGCACACCTGGGCCCAGCGTCTGA
GTGTGGGCTTGGGGAACGGAGGGGGCTCACTCACCCCCGCAAGCTGCACAGCCTGGGTGGGGCT
TAGCTGTTTCCATCCCATCCCTGCAACACTGGACCAACGGGACGGAGGCTGGTCCTTTAGGAGG
CCCCTCCACCTTCTAGCAAAGCACACGTGGCCGCAGGCCCTGCTGCGGCAGTCAGGCTCGGGGT
CAGGGGTCAGGGAGCCTCCGCGCCTGCCCTCCCCGCCTCCCACCCCACGCCCGCGTCTGTAAGT
GTGACTCCTCCCGCGCTGCTGTGTAGCCTTCTCTGTGTTGTGCTGGTCCCGTTGACTTCTGTGA
TTATCCACAAATAAATATTTTCATGCAGCCGTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_013360884	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000007084
	ENSCLAP00000007084.1

RefSeq Acc Id:

XP_013360884 ⟸ XM_013505430

- UniProtKB:

A0A8C2V0S0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEGDCRVLSIQSHVVRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWSGQVLNSSELQE
LYEGLKLNGVNKYDYVLTGYTRDASFLSMVVDIVQELKQQNSRLVYVCDPVMGDKWDGEGRMYV
PEDLLPVYREKVVPVADIITPNQFEAELLSGRKIRSQEEALAVMDVLHSMGPDTVVITSSDLPS
PRGSDYLIALGSQRTRRPDGSTVTQRIRMEMRKVDAVFVGTGDLFAAMLLAWTHKHPDNLKVAC
EKTVSAMHHVLQRTIRCAQAQAGEGRKPSPAQLELRMVQSKKDIEDPEIVVQATVL

hide sequence

Ensembl Acc Id:

ENSCLAP00000007084 ⟸ ENSCLAT00000007196

Protein Domains

Pyridoxamine kinase/Phosphomethylpyrimidine kinase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000004982	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000007196	ENTREZGENE
	ENSCLAT00000007196.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.1190.20	UniProtKB/TrEMBL
InterPro	PM/HMP-P_kinase-1	UniProtKB/TrEMBL
	PyrdxlKinase	UniProtKB/TrEMBL
	Ribokinase-like	UniProtKB/TrEMBL
NCBI Gene	Pdxk	ENTREZGENE
PANTHER	PTHR10534	UniProtKB/TrEMBL
	PYRIDOXAL KINASE	UniProtKB/TrEMBL
Pfam	Phos_pyr_kin	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53613	UniProtKB/TrEMBL
UniProt	A0A8C2V0S0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-01-17	Pdxk	pyridoxal kinase		pyridoxal (pyridoxine, vitamin B6) kinase	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Annotations - SMPDB