Fuom (fucose mutarotase) - Rat Genome Database

Name: Fuom
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Fuom (fucose mutarotase) Chinchilla lanigera

Analyze

Symbol:

Fuom

Name:

fucose mutarotase

RGD ID:

8922751

Description:

ENCODES a protein that exhibits fucose binding (ortholog); L-fucose mutarotase activity (ortholog); racemase and epimerase activity, acting on carbohydrates and derivatives (ortholog); INVOLVED IN female mating behavior (ortholog); fucose metabolic process (ortholog); fucosylation (ortholog); ASSOCIATED WITH distal 10q deletion syndrome (ortholog); genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FUOM (fucose mutarotase)	NCBI	Ortholog
Mus musculus (house mouse):	Fuom (fucose mutarotase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Fuom (fucose mutarotase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FUOM (fucose mutarotase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FUOM (fucose mutarotase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FUOM (fucose mutarotase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FUOM (fucose mutarotase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fuom (fucose mutarotase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955477	11,002,591 - 11,008,478 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955477	11,004,871 - 11,008,479 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

distal 10q deletion syndrome (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

female mating behavior (ISO)

fucose metabolic process (ISO)

fucosylation (ISO)

negative regulation of neuron differentiation (ISO)

neuron differentiation (ISO)

Molecular Function

fucose binding (ISO)

L-fucose mutarotase activity (ISO)

racemase and epimerase activity, acting on carbohydrates and derivatives (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Fuom
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955477	11,002,591 - 11,008,478 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955477	11,004,871 - 11,008,479 (-)	NCBI	ChiLan1.0	ChiLan1.0

FUOM
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	133,352,773 - 133,358,019 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	133,355,158 - 133,358,025 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	135,168,662 - 135,171,523 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	135,018,648 - 135,021,519 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	135,057,544 - 135,060,410	NCBI
Celera	10	128,345,999 - 128,348,870 (+)	NCBI		Celera
Cytogenetic Map	10	q26.3	NCBI
HuRef	10	128,712,773 - 128,715,644 (-)	NCBI		HuRef
CHM1_1	10	135,450,598 - 135,453,469 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	134,310,274 - 134,313,135 (-)	NCBI		T2T-CHM13v2.0

Fuom
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	139,677,724 - 139,684,745 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	139,676,683 - 139,682,354 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	140,097,811 - 140,104,832 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	140,096,770 - 140,102,441 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	147,285,369 - 147,288,305 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	139,950,790 - 139,953,639 (-)	NCBI		MGSCv36	mm8
Celera	7	139,897,533 - 139,900,469 (-)	NCBI		Celera
Cytogenetic Map	7	F4	NCBI
cM Map	7	85.11	NCBI

Fuom
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	204,318,180 - 204,322,690 (-)	NCBI		GRCr8
mRatBN7.2	1	194,888,535 - 194,893,046 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	194,886,709 - 194,893,046 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	203,249,400 - 203,253,911 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	210,384,437 - 210,388,964 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	203,058,268 - 203,062,792 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	212,563,714 - 212,568,224 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	212,563,714 - 212,568,224 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	1	141,832,774 - 141,836,250 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	219,478,363 - 219,482,873 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	199,895,086 - 199,899,596 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	200,046,108 - 200,049,153 (-)	NCBI
Celera	1	192,565,599 - 192,570,109 (-)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

FUOM
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	145,483,786 - 145,486,677 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	145,489,143 - 145,492,034 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	10	134,270,956 - 134,273,834 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	134,267,265 - 134,274,665 (-)	Ensembl	panpan1.1		panPan2

FUOM
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	40,933,140 - 40,936,722 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	40,988,233 - 40,991,798 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	41,568,107 - 41,571,678 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	28	41,052,196 - 41,055,766 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	41,041,790 - 41,045,361 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	41,444,691 - 41,448,263 (-)	NCBI		UU_Cfam_GSD_1.0

FUOM
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	141,331,810 - 141,336,633 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	141,331,801 - 141,336,628 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	153,788,697 - 153,792,961 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FUOM
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	53,204,739 - 53,209,037 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666054	41,341,450 - 41,345,715 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fuom
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	13,338,974 - 13,346,986 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	13,341,094 - 13,343,834 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005402064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013503055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013503056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013503057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013503058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01055713	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01092192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000004163 ⟹ ENSCLAP00000004082

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955477	11,002,591 - 11,008,438 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000004164 ⟹ ENSCLAP00000004083

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955477	11,004,871 - 11,008,478 (-)	Ensembl

RefSeq Acc Id:

XM_005402064 ⟹ XP_005402121

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955477	11,004,871 - 11,008,478 (-)	NCBI

Sequence:

show sequence

CCCAGGCCCCGTTTCCAGAGGCCCCGCCCAGGCCGCAGACATGGTGGTGCTGAAGGGCGTCCCG
GCACTGCTGTCTCCGGAGCTGCTGTATGCGTTGGCGCGCATGGGGCACGGAGACGAAATAGTTC
TTGCAGATGCTAACTTCCCCTCCTCCTCTATCTGTCGGTGTGGGCCTGTGGAGATCCGTGCAGA
TGGCCTGGGCATCCCGAAACTCCTGGAAGCTGTGTTGAAGCTGCTGCCCCTGGACACCTATGTG
GAGAGCCCGGCTGCTGTCATGGAGCTGGTGCCTGATGACAAGGAGAGGGGCCTGCAGACCCCAG
TGTGGAAAGATTATGAGATCCTCCTGCTCCAGGTTGGCTGCAGGAGCGCGCTGGCAAAGATAGA
AAGATTTGAGTTTTATGAACGAGCCAAGAAGGCTTTTGCTGTTGTTGCAACTGGGGAGACAGCA
CTCTATGGAAACATCATCCTCAAGAAAGGGACAATTGCCCTTGGCTCCCAGTTCGAGGCCTGGT
GAAGACTACTCTGAGGGCAGAAGAATTGACCGTGCCACTGGCCTACCTACAGCCACACCCAGAC
CTGGGCCTCAGCCAGGGTCTGTGGGAGCCAGTGAGTTTTGAGGGACGCTGCCAACTGAGACGGG
GATTACCCTGATTTTCTAAATGATGGAAAAACACAGTTACTATCAATCTTCAATCTAAAAGACT
GTTCTCCCTCCCAGGTTTGTTTGGAACTGGGCTTAGGAAAGCTACTGGCTCCTCAGAGAGTAGC
CACAACCCACCTGATGAATGAATGCTCAGGTGGGAAATCCTTGTGGGAAATGAGGCCTGCGGCC
GGGCAGAGTGCATGGCAGGGAAACCAGAGGTGGGTGCAGTGGCTGCCTGGCAGCTCAAGGAGAA
TGCGGACTTTCGCACAACTGCTCAGGATTCAGATACAAGGTGGCGCCTGATCAGGGCCACTCCC
TCTGCCTCAAGCAGGACAGGAGTGAGAGCTGGCCTAACACTTTGGAAGGAAAAAAAATGCAGGT
GTAGGGTGGAGGAGGGTGCATCCAGTACCAGTGAGGATGGTGTCAGCAACCTTGGTACAGGCCT
AGAGAGACCTGGGTGTGGGCTGGGCCTGTGTTCAGTAAATGGAGCACCCACTCCATAGGCCTGG
TGAAGACTACTCTGAGGGCAGAAGCAGCAGCTAGCCGCTTTGTACCTGGGGATGAAACCAGATA
GCACCTGCCTGCTTCCTGCTTAAAGCCGGGGTTGTCTTGGGAGGTAAAGGACACACAGTCATGT
AGTACCCAGTACTGGGCAGAGGGGCAGCAAGATATAGTAGTGGCCTGAAGGGGGTTGGTGCCTA
GAGGATTAGTGATGAGTTACCCTTGCAGTGCTTGGATTGAGTCACTGTCCAGACTGGAGGTCCT
CCCCTTAGGCCATTGGTGGCAAATCTGTGGCACACAGGCCACAGCGGGCACACACAACTCTCTC
TGTTGGCATGAAAGCCAAGTTACCCCAGCATCCAAGCATTGGATATAGTTGTTTTCTTCCTAAC
TAAAAGCTCTGAATTCAGATTTATTTAATTGCGGTGTTGAGACTGGTAAAAAGCGGATTTGAGA
TTGCA

hide sequence

RefSeq Acc Id:

XM_013503055 ⟹ XP_013358509

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955477	11,004,871 - 11,008,479 (-)	NCBI

Sequence:

show sequence

CCCCAGGCCCCGTTTCCAGAGGCCCCGCCCAGGCCGCAGACATGGTGGTGCTGAAGGGCGTCCC
GGCACTGCTGTCTCCGGAGCTGCTGTATGCGTTGGCGCGCATGGGGCACGGAGACGAAATAGTT
CTTGCAGATGCTAACTTCCCCTCCTCCTCTATCTGTCGGTGTGGGCCTGTGGAGATCCGTGCAG
ATGGCCTGGGCATCCCGAAACTCCTGGAAGCTGTGTTGAAGCTGCTGCCCCTGGACACCTATGT
GGAGAGCCCGGCTGCTGTCATGGAGCTGGTGCCTGATGACAAGGAGAGGGGCCTGCAGACCCCA
GTGTGGAAAGATTATGAGATCCTCCTGCTCCAGAGCGCGCTGGCAAAGATAGAAAGATTTGAGT
TTTATGAACGAGCCAAGAAGGCTTTTGCTGTTGTTGCAACTGGGGAGACAGCACTCTATGGAAA
CATCATCCTCAAGAAAGGGACAATTGCCCTTGGCTCCCAGTTCGAGGCCTGGTGAAGACTACTC
TGAGGGCAGAAGAATTGACCGTGCCACTGGCCTACCTACAGCCACACCCAGACCTGGGCCTCAG
CCAGGGTCTGTGGGAGCCAGTGAGTTTTGAGGGACGCTGCCAACTGAGACGGGGATTACCCTGA
TTTTCTAAATGATGGAAAAACACAGTTACTATCAATCTTCAATCTAAAAGACTGTTCTCCCTCC
CAGGTTTGTTTGGAACTGGGCTTAGGAAAGCTACTGGCTCCTCAGAGAGTAGCCACAACCCACC
TGATGAATGAATGCTCAGGTGGGAAATCCTTGTGGGAAATGAGGCCTGCGGCCGGGCAGAGTGC
ATGGCAGGGAAACCAGAGGTGGGTGCAGTGGCTGCCTGGCAGCTCAAGGAGAATGCGGACTTTC
GCACAACTGCTCAGGATTCAGATACAAGGTGGCGCCTGATCAGGGCCACTCCCTCTGCCTCAAG
CAGGACAGGAGTGAGAGCTGGCCTAACACTTTGGAAGGAAAAAAAATGCAGGTGTAGGGTGGAG
GAGGGTGCATCCAGTACCAGTGAGGATGGTGTCAGCAACCTTGGTACAGGCCTAGAGAGACCTG
GGTGTGGGCTGGGCCTGTGTTCAGTAAATGGAGCACCCACTCCATAGGCCTGGTGAAGACTACT
CTGAGGGCAGAAGCAGCAGCTAGCCGCTTTGTACCTGGGGATGAAACCAGATAGCACCTGCCTG
CTTCCTGCTTAAAGCCGGGGTTGTCTTGGGAGGTAAAGGACACACAGTCATGTAGTACCCAGTA
CTGGGCAGAGGGGCAGCAAGATATAGTAGTGGCCTGAAGGGGGTTGGTGCCTAGAGGATTAGTG
ATGAGTTACCCTTGCAGTGCTTGGATTGAGTCACTGTCCAGACTGGAGGTCCTCCCCTTAGGCC
ATTGGTGGCAAATCTGTGGCACACAGGCCACAGCGGGCACACACAACTCTCTCTGTTGGCATGA
AAGCCAAGTTACCCCAGCATCCAAGCATTGGATATAGTTGTTTTCTTCCTAACTAAAAGCTCTG
AATTCAGATTTATTTAATTGCGGTGTTGAGACTGGTAAAAAGCGGATTTGAGATTGCA

hide sequence

RefSeq Acc Id:

XM_013503056 ⟹ XP_013358510

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955477	11,004,871 - 11,008,479 (-)	NCBI

Sequence:

show sequence

CCCCAGGCCCCGTTTCCAGAGGCCCCGCCCAGGCCGCAGACATGGTGGTGCTGAAGGGCGTCCC
GGCACTGCTGTCTCCGGAGCTGCTGTATGCGTTGGCGCGCATGGGGCACGGAGACGAAATAGAT
GGCCTGGGCATCCCGAAACTCCTGGAAGCTGTGTTGAAGCTGCTGCCCCTGGACACCTATGTGG
AGAGCCCGGCTGCTGTCATGGAGCTGGTGCCTGATGACAAGGAGAGGGGCCTGCAGACCCCAGT
GTGGAAAGATTATGAGATCCTCCTGCTCCAGGTTGGCTGCAGGAGCGCGCTGGCAAAGATAGAA
AGATTTGAGTTTTATGAACGAGCCAAGAAGGCTTTTGCTGTTGTTGCAACTGGGGAGACAGCAC
TCTATGGAAACATCATCCTCAAGAAAGGGACAATTGCCCTTGGCTCCCAGTTCGAGGCCTGGTG
AAGACTACTCTGAGGGCAGAAGAATTGACCGTGCCACTGGCCTACCTACAGCCACACCCAGACC
TGGGCCTCAGCCAGGGTCTGTGGGAGCCAGTGAGTTTTGAGGGACGCTGCCAACTGAGACGGGG
ATTACCCTGATTTTCTAAATGATGGAAAAACACAGTTACTATCAATCTTCAATCTAAAAGACTG
TTCTCCCTCCCAGGTTTGTTTGGAACTGGGCTTAGGAAAGCTACTGGCTCCTCAGAGAGTAGCC
ACAACCCACCTGATGAATGAATGCTCAGGTGGGAAATCCTTGTGGGAAATGAGGCCTGCGGCCG
GGCAGAGTGCATGGCAGGGAAACCAGAGGTGGGTGCAGTGGCTGCCTGGCAGCTCAAGGAGAAT
GCGGACTTTCGCACAACTGCTCAGGATTCAGATACAAGGTGGCGCCTGATCAGGGCCACTCCCT
CTGCCTCAAGCAGGACAGGAGTGAGAGCTGGCCTAACACTTTGGAAGGAAAAAAAATGCAGGTG
TAGGGTGGAGGAGGGTGCATCCAGTACCAGTGAGGATGGTGTCAGCAACCTTGGTACAGGCCTA
GAGAGACCTGGGTGTGGGCTGGGCCTGTGTTCAGTAAATGGAGCACCCACTCCATAGGCCTGGT
GAAGACTACTCTGAGGGCAGAAGCAGCAGCTAGCCGCTTTGTACCTGGGGATGAAACCAGATAG
CACCTGCCTGCTTCCTGCTTAAAGCCGGGGTTGTCTTGGGAGGTAAAGGACACACAGTCATGTA
GTACCCAGTACTGGGCAGAGGGGCAGCAAGATATAGTAGTGGCCTGAAGGGGGTTGGTGCCTAG
AGGATTAGTGATGAGTTACCCTTGCAGTGCTTGGATTGAGTCACTGTCCAGACTGGAGGTCCTC
CCCTTAGGCCATTGGTGGCAAATCTGTGGCACACAGGCCACAGCGGGCACACACAACTCTCTCT
GTTGGCATGAAAGCCAAGTTACCCCAGCATCCAAGCATTGGATATAGTTGTTTTCTTCCTAACT
AAAAGCTCTGAATTCAGATTTATTTAATTGCGGTGTTGAGACTGGTAAAAAGCGGATTTGAGAT
TGCA

hide sequence

RefSeq Acc Id:

XM_013503057 ⟹ XP_013358511

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955477	11,004,871 - 11,008,479 (-)	NCBI

Sequence:

show sequence

CCCCAGGCCCCGTTTCCAGAGGCCCCGCCCAGGCCGCAGACATGGTGGTGCTGAAGGGCGTCCC
GGCACTGCTGTCTCCGGAGCTGCTGTATGCGTTGGCGCGCATGGGGCACGGAGACGAAATAGGC
CTGGGCATCCCGAAACTCCTGGAAGCTGTGTTGAAGCTGCTGCCCCTGGACACCTATGTGGAGA
GCCCGGCTGCTGTCATGGAGCTGGTGCCTGATGACAAGGAGAGGGGCCTGCAGACCCCAGTGTG
GAAAGATTATGAGATCCTCCTGCTCCAGGTTGGCTGCAGGAGCGCGCTGGCAAAGATAGAAAGA
TTTGAGTTTTATGAACGAGCCAAGAAGGCTTTTGCTGTTGTTGCAACTGGGGAGACAGCACTCT
ATGGAAACATCATCCTCAAGAAAGGGACAATTGCCCTTGGCTCCCAGTTCGAGGCCTGGTGAAG
ACTACTCTGAGGGCAGAAGAATTGACCGTGCCACTGGCCTACCTACAGCCACACCCAGACCTGG
GCCTCAGCCAGGGTCTGTGGGAGCCAGTGAGTTTTGAGGGACGCTGCCAACTGAGACGGGGATT
ACCCTGATTTTCTAAATGATGGAAAAACACAGTTACTATCAATCTTCAATCTAAAAGACTGTTC
TCCCTCCCAGGTTTGTTTGGAACTGGGCTTAGGAAAGCTACTGGCTCCTCAGAGAGTAGCCACA
ACCCACCTGATGAATGAATGCTCAGGTGGGAAATCCTTGTGGGAAATGAGGCCTGCGGCCGGGC
AGAGTGCATGGCAGGGAAACCAGAGGTGGGTGCAGTGGCTGCCTGGCAGCTCAAGGAGAATGCG
GACTTTCGCACAACTGCTCAGGATTCAGATACAAGGTGGCGCCTGATCAGGGCCACTCCCTCTG
CCTCAAGCAGGACAGGAGTGAGAGCTGGCCTAACACTTTGGAAGGAAAAAAAATGCAGGTGTAG
GGTGGAGGAGGGTGCATCCAGTACCAGTGAGGATGGTGTCAGCAACCTTGGTACAGGCCTAGAG
AGACCTGGGTGTGGGCTGGGCCTGTGTTCAGTAAATGGAGCACCCACTCCATAGGCCTGGTGAA
GACTACTCTGAGGGCAGAAGCAGCAGCTAGCCGCTTTGTACCTGGGGATGAAACCAGATAGCAC
CTGCCTGCTTCCTGCTTAAAGCCGGGGTTGTCTTGGGAGGTAAAGGACACACAGTCATGTAGTA
CCCAGTACTGGGCAGAGGGGCAGCAAGATATAGTAGTGGCCTGAAGGGGGTTGGTGCCTAGAGG
ATTAGTGATGAGTTACCCTTGCAGTGCTTGGATTGAGTCACTGTCCAGACTGGAGGTCCTCCCC
TTAGGCCATTGGTGGCAAATCTGTGGCACACAGGCCACAGCGGGCACACACAACTCTCTCTGTT
GGCATGAAAGCCAAGTTACCCCAGCATCCAAGCATTGGATATAGTTGTTTTCTTCCTAACTAAA
AGCTCTGAATTCAGATTTATTTAATTGCGGTGTTGAGACTGGTAAAAAGCGGATTTGAGATTGC
A

hide sequence

RefSeq Acc Id:

XM_013503058 ⟹ XP_013358512

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955477	11,004,871 - 11,008,161 (-)	NCBI

Sequence:

show sequence

TTGGCCTGGATGCAAATGTACCGGGGCAGATCTAACCCCTCCGCAGGGTGTCCTGGGCTAACCG
AGCGGGATTCCTTTTCTAGCCTAGATGGCCTGGGCATCCCGAAACTCCTGGAAGCTGTGTTGAA
GCTGCTGCCCCTGGACACCTATGTGGAGAGCCCGGCTGCTGTCATGGAGCTGGTGCCTGATGAC
AAGGAGAGGGGCCTGCAGACCCCAGTGTGGAAAGATTATGAGATCCTCCTGCTCCAGGTTGGCT
GCAGGAGCGCGCTGGCAAAGATAGAAAGATTTGAGTTTTATGAACGAGCCAAGAAGGCTTTTGC
TGTTGTTGCAACTGGGGAGACAGCACTCTATGGAAACATCATCCTCAAGAAAGGGACAATTGCC
CTTGGCTCCCAGTTCGAGGCCTGGTGAAGACTACTCTGAGGGCAGAAGAATTGACCGTGCCACT
GGCCTACCTACAGCCACACCCAGACCTGGGCCTCAGCCAGGGTCTGTGGGAGCCAGTGAGTTTT
GAGGGACGCTGCCAACTGAGACGGGGATTACCCTGATTTTCTAAATGATGGAAAAACACAGTTA
CTATCAATCTTCAATCTAAAAGACTGTTCTCCCTCCCAGGTTTGTTTGGAACTGGGCTTAGGAA
AGCTACTGGCTCCTCAGAGAGTAGCCACAACCCACCTGATGAATGAATGCTCAGGTGGGAAATC
CTTGTGGGAAATGAGGCCTGCGGCCGGGCAGAGTGCATGGCAGGGAAACCAGAGGTGGGTGCAG
TGGCTGCCTGGCAGCTCAAGGAGAATGCGGACTTTCGCACAACTGCTCAGGATTCAGATACAAG
GTGGCGCCTGATCAGGGCCACTCCCTCTGCCTCAAGCAGGACAGGAGTGAGAGCTGGCCTAACA
CTTTGGAAGGAAAAAAAATGCAGGTGTAGGGTGGAGGAGGGTGCATCCAGTACCAGTGAGGATG
GTGTCAGCAACCTTGGTACAGGCCTAGAGAGACCTGGGTGTGGGCTGGGCCTGTGTTCAGTAAA
TGGAGCACCCACTCCATAGGCCTGGTGAAGACTACTCTGAGGGCAGAAGCAGCAGCTAGCCGCT
TTGTACCTGGGGATGAAACCAGATAGCACCTGCCTGCTTCCTGCTTAAAGCCGGGGTTGTCTTG
GGAGGTAAAGGACACACAGTCATGTAGTACCCAGTACTGGGCAGAGGGGCAGCAAGATATAGTA
GTGGCCTGAAGGGGGTTGGTGCCTAGAGGATTAGTGATGAGTTACCCTTGCAGTGCTTGGATTG
AGTCACTGTCCAGACTGGAGGTCCTCCCCTTAGGCCATTGGTGGCAAATCTGTGGCACACAGGC
CACAGCGGGCACACACAACTCTCTCTGTTGGCATGAAAGCCAAGTTACCCCAGCATCCAAGCAT
TGGATATAGTTGTTTTCTTCCTAACTAAAAGCTCTGAATTCAGATTTATTTAATTGCGGTGTTG
AGACTGGTAAAAAGCGGATTTGAGATTGCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005402121	(Get FASTA)	NCBI Sequence Viewer
	XP_013358509	(Get FASTA)	NCBI Sequence Viewer
	XP_013358510	(Get FASTA)	NCBI Sequence Viewer
	XP_013358511	(Get FASTA)	NCBI Sequence Viewer
	XP_013358512	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000004082.1
	ENSCLAP00000004083
	ENSCLAP00000004083.1

RefSeq Acc Id:	XP_005402121 ⟸ XM_005402064
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UTI9 (UniProtKB/TrEMBL), A0A8C2UQM5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVVLKGVPALLSPELLYALARMGHGDEIVLADANFPSSSICRCGPVEIRADGLGIPKLLEAVLK LLPLDTYVESPAAVMELVPDDKERGLQTPVWKDYEILLLQVGCRSALAKIERFEFYERAKKAFA VVATGETALYGNIILKKGTIALGSQFEAW hide sequence

RefSeq Acc Id:	XP_013358511 ⟸ XM_013503057
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C2UQM5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVVLKGVPALLSPELLYALARMGHGDEIGLGIPKLLEAVLKLLPLDTYVESPAAVMELVPDDKE RGLQTPVWKDYEILLLQVGCRSALAKIERFEFYERAKKAFAVVATGETALYGNIILKKGTIALG SQFEAW hide sequence

RefSeq Acc Id:	XP_013358510 ⟸ XM_013503056
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2UQM5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVVLKGVPALLSPELLYALARMGHGDEIDGLGIPKLLEAVLKLLPLDTYVESPAAVMELVPDDK ERGLQTPVWKDYEILLLQVGCRSALAKIERFEFYERAKKAFAVVATGETALYGNIILKKGTIAL GSQFEAW hide sequence

RefSeq Acc Id:	XP_013358509 ⟸ XM_013503055
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UQM5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVVLKGVPALLSPELLYALARMGHGDEIVLADANFPSSSICRCGPVEIRADGLGIPKLLEAVLK LLPLDTYVESPAAVMELVPDDKERGLQTPVWKDYEILLLQSALAKIERFEFYERAKKAFAVVAT GETALYGNIILKKGTIALGSQFEAW hide sequence

RefSeq Acc Id:	XP_013358512 ⟸ XM_013503058
- Peptide Label:	isoform X5
- Sequence:	show sequence MQMYRGRSNPSAGCPGLTERDSFSSLDGLGIPKLLEAVLKLLPLDTYVESPAAVMELVPDDKER GLQTPVWKDYEILLLQVGCRSALAKIERFEFYERAKKAFAVVATGETALYGNIILKKGTIALGS QFEAW hide sequence

RefSeq Acc Id:

ENSCLAP00000004082 ⟸ ENSCLAT00000004163

RefSeq Acc Id:

ENSCLAP00000004083 ⟸ ENSCLAT00000004164

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000002915	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004163.1	UniProtKB/TrEMBL
	ENSCLAT00000004164	ENTREZGENE
	ENSCLAT00000004164.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.1650.10	UniProtKB/TrEMBL
InterPro	RbsD-like_sf	UniProtKB/TrEMBL
	RbsD_FucU	UniProtKB/TrEMBL
NCBI Gene	Fuom	ENTREZGENE
PANTHER	FUCOSE MUTAROTASE	UniProtKB/TrEMBL
	FUCOSE MUTAROTASE	UniProtKB/TrEMBL
Pfam	RbsD_FucU	UniProtKB/TrEMBL
Superfamily-SCOP	SSF102546	UniProtKB/TrEMBL
UniProt	A0A8C2UQM5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2UTI9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar