Dgkz (diacylglycerol kinase zeta) - Rat Genome Database

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Gene: Dgkz (diacylglycerol kinase zeta) Chinchilla lanigera
Analyze
Symbol: Dgkz
Name: diacylglycerol kinase zeta
RGD ID: 8700387
Description: ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); enzyme inhibitor activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIc (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: diacylglycerol kinase, zeta
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554221,657,926 - 1,695,404 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554221,658,237 - 1,687,000 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Dgkz
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554221,657,926 - 1,695,404 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554221,658,237 - 1,687,000 (-)NCBIChiLan1.0ChiLan1.0
DGKZ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381146,332,926 - 46,380,554 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1146,332,905 - 46,380,554 (+)EnsemblGRCh38hg38GRCh38
GRCh371146,354,476 - 46,402,104 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361146,311,315 - 46,358,680 (+)NCBINCBI36Build 36hg18NCBI36
Build 341146,323,562 - 46,358,680NCBI
Celera1146,502,317 - 46,549,682 (+)NCBICelera
Cytogenetic Map11p11.2NCBI
HuRef1146,061,412 - 46,109,062 (+)NCBIHuRef
CHM1_11146,352,750 - 46,400,540 (+)NCBICHM1_1
T2T-CHM13v2.01146,489,001 - 46,536,630 (+)NCBIT2T-CHM13v2.0
Dgkz
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39291,763,167 - 91,806,788 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl291,763,169 - 91,806,209 (-)EnsemblGRCm39 Ensembl
GRCm38291,932,822 - 91,976,443 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl291,932,824 - 91,975,864 (-)EnsemblGRCm38mm10GRCm38
MGSCv37291,772,979 - 91,803,720 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36291,733,665 - 91,764,438 (-)NCBIMGSCv36mm8
Celera293,323,226 - 93,354,092 (-)NCBICelera
Cytogenetic Map2E1NCBI
cM Map250.63NCBI
Dgkz
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8398,359,804 - 98,401,847 (-)NCBIGRCr8
mRatBN7.2377,904,149 - 77,946,114 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl377,904,150 - 77,946,099 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx381,379,328 - 81,409,244 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0389,978,358 - 90,008,274 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0387,829,580 - 87,859,521 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0380,844,002 - 80,886,487 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl380,844,005 - 80,875,817 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0387,542,666 - 87,584,698 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4376,312,721 - 76,342,603 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1376,209,092 - 76,238,975 (-)NCBI
Celera377,106,807 - 77,136,681 (-)NCBICelera
Cytogenetic Map3q24NCBI
DGKZ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2948,546,486 - 48,593,658 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11148,553,316 - 48,600,485 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01146,291,592 - 46,339,127 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11146,841,605 - 46,889,763 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1146,841,605 - 46,889,763 (+)Ensemblpanpan1.1panPan2
DGKZ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11843,088,169 - 43,103,820 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1843,088,525 - 43,129,294 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1841,816,433 - 41,857,562 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01843,743,999 - 43,785,151 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1843,744,000 - 43,785,151 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11843,228,986 - 43,270,069 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01842,780,862 - 42,821,933 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01843,514,095 - 43,555,174 (-)NCBIUU_Cfam_GSD_1.0
Dgkz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494720,579,265 - 20,621,717 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365622,690,858 - 2,733,620 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365622,690,907 - 2,733,455 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DGKZ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl216,134,048 - 16,176,238 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1216,134,046 - 16,176,043 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2217,480,094 - 17,495,716 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DGKZ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1118,949,360 - 18,997,957 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl118,948,425 - 18,982,354 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038116,234,046 - 116,283,086 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dgkz
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247672,173,272 - 2,210,279 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247672,173,774 - 2,210,304 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023636   ⟹   ENSCLAP00000023415
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554221,657,926 - 1,672,797 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000023637   ⟹   ENSCLAP00000023416
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554221,658,013 - 1,686,459 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000023638   ⟹   ENSCLAP00000023417
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554221,658,832 - 1,695,404 (-)Ensembl
RefSeq Acc Id: XM_005384031   ⟹   XP_005384088
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554221,658,237 - 1,672,916 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005384033   ⟹   XP_005384090
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554221,658,237 - 1,672,797 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005384035   ⟹   XP_005384092
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554221,658,237 - 1,686,474 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005384038   ⟹   XP_005384095
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554221,658,237 - 1,687,000 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514024   ⟹   XP_013369478
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554221,658,237 - 1,672,797 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_005384095   ⟸   XM_005384038
- Peptide Label: isoform X4
- UniProtKB: A0A8C2W0L8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005384092   ⟸   XM_005384035
- Peptide Label: isoform X3
- UniProtKB: A0A8C2W0J8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005384090   ⟸   XM_005384033
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005384088   ⟸   XM_005384031
- Peptide Label: isoform X1
- UniProtKB: A0A8C2W5F8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013369478   ⟸   XM_013514024
- Peptide Label: isoform X1
- UniProtKB: A0A8C2W5F8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000023415   ⟸   ENSCLAT00000023636
RefSeq Acc Id: ENSCLAP00000023416   ⟸   ENSCLAT00000023637
RefSeq Acc Id: ENSCLAP00000023417   ⟸   ENSCLAT00000023638
Protein Domains
DAGKc


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016057 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000023636 ENTREZGENE
  ENSCLAT00000023636.1 UniProtKB/TrEMBL
  ENSCLAT00000023637 ENTREZGENE
  ENSCLAT00000023637.1 UniProtKB/TrEMBL
  ENSCLAT00000023638 ENTREZGENE
  ENSCLAT00000023638.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
  2.60.200.40 UniProtKB/TrEMBL
  3.30.60.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  ATP-NAD_kinase_N UniProtKB/TrEMBL
  C1_DGKzeta_rpt1 UniProtKB/TrEMBL
  C1_DGKzeta_rpt2 UniProtKB/TrEMBL
  DGK UniProtKB/TrEMBL
  Diacylglycerol_kin_accessory UniProtKB/TrEMBL
  Diacylglycerol_kinase_cat_dom UniProtKB/TrEMBL
  NAD/diacylglycerol_kinase_sf UniProtKB/TrEMBL
  PE/DAG-bd UniProtKB/TrEMBL
NCBI Gene Dgkz ENTREZGENE
PANTHER DIACYLGLYCEROL KINASE ZETA UniProtKB/TrEMBL
  PTHR11255 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  C1_1 UniProtKB/TrEMBL
  DAGK_acc UniProtKB/TrEMBL
  DAGK_cat UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  DAGK UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
  DAGKa UniProtKB/TrEMBL
  DAGKc UniProtKB/TrEMBL
  SM00109 UniProtKB/TrEMBL
Superfamily-SCOP SSF111331 UniProtKB/TrEMBL
  SSF48403 UniProtKB/TrEMBL
UniProt A0A8C2W0J8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2W0L8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2W5F8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Dgkz  diacylglycerol kinase zeta    diacylglycerol kinase, zeta  Symbol and/or name change 5135510 APPROVED