Acacb (acetyl-CoA carboxylase beta) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Acacb (acetyl-CoA carboxylase beta) Chinchilla lanigera
Analyze
Symbol: Acacb
Name: acetyl-CoA carboxylase beta
RGD ID: 8981436
Description: ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); energy homeostasis (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); fatty liver disease (ortholog); immunodeficiency with hyper IgM type 5 (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: acetyl-CoA carboxylase 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545510,308,192 - 10,426,076 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545510,282,308 - 10,427,439 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Acacb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545510,308,192 - 10,426,076 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545510,282,308 - 10,427,439 (+)NCBIChiLan1.0ChiLan1.0
ACACB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl12109,116,595 - 109,268,226 (+)EnsemblGRCh38hg38GRCh38
GRCh3812109,112,666 - 109,268,226 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3712109,554,392 - 109,706,031 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612108,061,585 - 108,190,414 (+)NCBINCBI36hg18NCBI36
Build 3412108,039,930 - 108,166,887NCBI
Celera12109,201,352 - 109,330,479 (+)NCBI
Cytogenetic Map12q24.11NCBI
HuRef12106,595,722 - 106,724,234 (+)NCBIHuRef
CHM1_112109,544,852 - 109,673,937 (+)NCBICHM1_1
Acacb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395114,284,378 - 114,388,822 (+)NCBIGRCm39mm39
GRCm39 Ensembl5114,284,596 - 114,388,822 (+)Ensembl
GRCm385114,146,321 - 114,250,761 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5114,146,535 - 114,250,761 (+)EnsemblGRCm38mm10GRCm38
MGSCv375114,615,527 - 114,700,767 (+)NCBIGRCm37mm9NCBIm37
MGSCv365114,426,517 - 114,510,733 (+)NCBImm8
Celera5111,267,324 - 111,357,484 (+)NCBICelera
Cytogenetic Map5FNCBI
Acacb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21242,365,800 - 42,477,651 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1242,366,548 - 42,457,655 (-)Ensembl
Rnor_6.01248,127,149 - 48,238,969 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1248,127,149 - 48,238,887 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01249,914,427 - 50,000,957 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41243,388,679 - 43,492,993 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11243,252,066 - 43,356,381 (-)NCBI
Celera1243,976,897 - 44,062,163 (-)NCBICelera
Cytogenetic Map12q16NCBI
ACACB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.112110,086,374 - 110,239,847 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12110,086,374 - 110,239,847 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v012106,692,668 - 106,845,490 (+)NCBIMhudiblu_PPA_v0panPan3
ACACB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12617,763,531 - 17,895,319 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2617,747,362 - 17,894,400 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2617,906,250 - 18,037,960 (+)NCBI
ROS_Cfam_1.02618,106,936 - 18,239,349 (-)NCBI
UMICH_Zoey_3.12618,115,480 - 18,247,107 (+)NCBI
UNSW_CanFamBas_1.02618,097,758 - 18,229,980 (-)NCBI
UU_Cfam_GSD_1.02618,116,847 - 18,248,772 (-)NCBI
Acacb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118144,422,223 - 144,525,063 (-)NCBI
SpeTri2.0NW_004936769950,970 - 1,053,671 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACACB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11441,621,574 - 41,739,916 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21444,153,373 - 44,271,216 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACACB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111104,325,250 - 104,488,567 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl11104,349,573 - 104,488,003 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037140,614,337 - 140,773,620 (-)NCBIVero_WHO_p1.0
Acacb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474712,287,817 - 12,426,340 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000013665   ⟹   ENSCLAP00000013511
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545510,308,192 - 10,426,076 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000013666   ⟹   ENSCLAP00000013512
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545510,320,433 - 10,364,301 (+)Ensembl
RefSeq Acc Id: XM_005396484   ⟹   XP_005396541
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545510,298,917 - 10,427,439 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013520458   ⟹   XP_013375912
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545510,288,115 - 10,427,439 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013520459   ⟹   XP_013375913
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545510,282,308 - 10,427,439 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013520460   ⟹   XP_013375914
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545510,320,456 - 10,427,439 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013520461   ⟹   XP_013375915
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545510,323,599 - 10,427,439 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005396541   ⟸   XM_005396484
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013375913   ⟸   XM_013520459
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013375912   ⟸   XM_013520458
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013375914   ⟸   XM_013520460
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013375915   ⟸   XM_013520461
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCLAP00000013511   ⟸   ENSCLAT00000013665
RefSeq Acc Id: ENSCLAP00000013512   ⟸   ENSCLAT00000013666


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000009339 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000013511 ENTREZGENE
Ensembl Transcript ENSCLAT00000013665 ENTREZGENE
NCBI Gene Acacb ENTREZGENE