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Gene: Ntsr1 (neurotensin receptor 1) Chinchilla lanigera

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Symbol:

Ntsr1

Name:

neurotensin receptor 1

RGD ID:

8800944

Description:

ENCODES a protein that exhibits G protein-coupled neurotensin receptor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

neurotensin receptor 1 (high affinity); neurotensin receptor type 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NTSR1 (neurotensin receptor 1)	NCBI	Ortholog
Mus musculus (house mouse):	Ntsr1 (neurotensin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ntsr1 (neurotensin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NTSR1 (neurotensin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NTSR1 (neurotensin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ntsr1 (neurotensin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NTSR1 (neurotensin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NTSR1 (neurotensin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ntsr1 (neurotensin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955528	1,348,555 - 1,394,868 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955528	1,348,616 - 1,394,798 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ntsr1	Chinchilla	alcohol dependence	susceptibility	ISO	NTSR1 (Homo sapiens)	9068941	DNA:SNPs more ...	RGD	PMID:23743782 and REF_RGD_ID:596948429
Ntsr1	Chinchilla	COVID-19		ISO	NTSR1 (Homo sapiens)	9068941	mRNA:increased expression:peripheral blood mononuclear cell (human)	RGD	PMID:32228226 and REF_RGD_ID:28912744
Ntsr1	Chinchilla	Hyperalgesia		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:22396077 and REF_RGD_ID:9743902
Ntsr1	Chinchilla	opiate dependence	susceptibility	ISO	NTSR1 (Homo sapiens)	9068941	DNA:SNP:intron:rs3915568(human)	RGD	PMID:26384852 and REF_RGD_ID:11522680
Ntsr1	Chinchilla	Parkinson's disease		ISO	NTSR1 (Homo sapiens)	9068941		RGD	PMID:7700529 and REF_RGD_ID:9743906
Ntsr1	Chinchilla	schizophrenia		ISO	NTSR1 (Homo sapiens)	9068941	DNA:repeat:enhancer:	RGD

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ntsr1	Chinchilla	developmental and epileptic encephalopathy		ISO	NTSR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy	ClinVar	PMID:24811917 more ...
Ntsr1	Chinchilla	developmental and epileptic encephalopathy 33		ISO	NTSR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Epileptic encephalopathy more ...	ClinVar	PMID:24811917 more ...
Ntsr1	Chinchilla	early infantile epileptic encephalopathy		ISO	NTSR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Early infantile epileptic encephalopathy	ClinVar	PMID:24811917 more ...
Ntsr1	Chinchilla	epilepsy		ISO	NTSR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Epilepsy	ClinVar	PMID:25741868
Ntsr1	Chinchilla	neuronal ceroid lipofuscinosis		ISO	NTSR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Ceroid storage disease	ClinVar	PMID:25921748 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ntsr1	Chinchilla	autism spectrum disorder		ISO	NTSR1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:24781735
Ntsr1	Chinchilla	Pain		ISO	NTSR1 (Homo sapiens)	9068941	CTD Direct Evidence: therapeutic	CTD	PMID:20727387
Ntsr1	Chinchilla	schizophrenia		ISO	NTSR1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:20659557

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ntsr1	Chinchilla	adult locomotory behavior	acts_upstream_of_or_within	ISO	MGI:98735	9068941	PMID:15353215	MGI	PMID:15353215
Ntsr1	Chinchilla	associative learning		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:24831231 and REF_RGD_ID:596948424
Ntsr1	Chinchilla	cAMP biosynthetic process		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:12869647 and REF_RGD_ID:596992334
Ntsr1	Chinchilla	conditioned place preference		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:17356568 and REF_RGD_ID:597000687
Ntsr1	Chinchilla	D-aspartate import across plasma membrane		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:12123836 and REF_RGD_ID:1566569
Ntsr1	Chinchilla	detection of temperature stimulus involved in sensory perception of pain		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:15733655 and REF_RGD_ID:9743979
Ntsr1	Chinchilla	inositol phosphate catabolic process		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:15707678 and REF_RGD_ID:9743914
Ntsr1	Chinchilla	L-glutamate import across plasma membrane		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:12123836 and REF_RGD_ID:1566569
Ntsr1	Chinchilla	learning		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:21946307 and REF_RGD_ID:9743852
Ntsr1	Chinchilla	negative regulation of apoptotic process	involved_in	ISO	NTSR1 (Homo sapiens)	9068941	PMID:21725197	UniProt	PMID:21725197
Ntsr1	Chinchilla	negative regulation of release of sequestered calcium ion into cytosol		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:12084713 and REF_RGD_ID:727385
Ntsr1	Chinchilla	negative regulation of systemic arterial blood pressure		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:22211865 and REF_RGD_ID:9727449
Ntsr1	Chinchilla	neuropeptide signaling pathway	involved_in	ISO	NTSR1 (Homo sapiens)	9068941	PMID:21725197	UniProt	PMID:21725197
Ntsr1	Chinchilla	neuropeptide signaling pathway	involved_in	ISO	UniProtKB:P30990	9068941	PMID:21806946	ARUK-UCL	PMID:21806946
Ntsr1	Chinchilla	positive regulation of apoptotic process		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:18063561 and REF_RGD_ID:9743970
Ntsr1	Chinchilla	positive regulation of arachidonate secretion		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:11852105 and REF_RGD_ID:9743869
Ntsr1	Chinchilla	positive regulation of cation channel activity		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:19359367 and REF_RGD_ID:9743912
Ntsr1	Chinchilla	positive regulation of gamma-aminobutyric acid secretion		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:15716398 and REF_RGD_ID:9743972
Ntsr1	Chinchilla	positive regulation of gene expression	acts_upstream_of	ISO	UniProtKB:P30990	9068941	PMID:21806946	ARUK-UCL	PMID:21806946
Ntsr1	Chinchilla	positive regulation of glutamate secretion		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:18063561 and REF_RGD_ID:9743970
Ntsr1	Chinchilla	positive regulation of inhibitory postsynaptic potential		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:15664687 and REF_RGD_ID:9831120
Ntsr1	Chinchilla	positive regulation of inositol phosphate biosynthetic process		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:11861328 and REF_RGD_ID:9743897
Ntsr1	Chinchilla	positive regulation of locomotion		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:17356568 and REF_RGD_ID:597000687
Ntsr1	Chinchilla	positive regulation of release of sequestered calcium ion into cytosol		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:10799761 and REF_RGD_ID:9743926
Ntsr1	Chinchilla	regulation of behavioral fear response		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:24831231 and REF_RGD_ID:596948424
Ntsr1	Chinchilla	regulation of inositol trisphosphate biosynthetic process		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:12869647 and REF_RGD_ID:596992334
Ntsr1	Chinchilla	regulation of membrane depolarization		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:15120846 and REF_RGD_ID:9743930
Ntsr1	Chinchilla	regulation of respiratory gaseous exchange		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:22211865 and REF_RGD_ID:9727449
Ntsr1	Chinchilla	response to food		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:27765644 and REF_RGD_ID:597000689
Ntsr1	Chinchilla	response to lipid		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:22306739 and REF_RGD_ID:9743853
Ntsr1	Chinchilla	response to stress		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:24831231 and REF_RGD_ID:596948424
Ntsr1	Chinchilla	temperature homeostasis		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:7620825 and REF_RGD_ID:9698456
Ntsr1	Chinchilla	vocalization behavior		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:24275076 and REF_RGD_ID:596992332

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ntsr1	Chinchilla	axon		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:8876464 and REF_RGD_ID:9743919
Ntsr1	Chinchilla	axon terminus		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:8876464 and REF_RGD_ID:9743919
Ntsr1	Chinchilla	cell surface		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:17188644 and REF_RGD_ID:9743899
Ntsr1	Chinchilla	cytoplasmic side of plasma membrane		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:9763490 and REF_RGD_ID:9831116
Ntsr1	Chinchilla	dendrite		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:10818259 and REF_RGD_ID:9743847
Ntsr1	Chinchilla	dendritic shaft		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:9763490 and REF_RGD_ID:9831116
Ntsr1	Chinchilla	dendritic spine		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:9763490 and REF_RGD_ID:9831116
Ntsr1	Chinchilla	membrane raft	located_in	ISO	NTSR1 (Homo sapiens)	9068941	PMID:21725197	UniProt	PMID:21725197
Ntsr1	Chinchilla	neuron spine		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:10818259 and REF_RGD_ID:9743847
Ntsr1	Chinchilla	neuronal cell body		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:9763490 and REF_RGD_ID:9831116
Ntsr1	Chinchilla	perikaryon		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:10818259 more ...
Ntsr1	Chinchilla	plasma membrane	located_in	ISO	NTSR1 (Homo sapiens)	9068941	PMID:8381365	UniProt	PMID:8381365
Ntsr1	Chinchilla	symmetric synapse		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:10818259 and REF_RGD_ID:9743847
Ntsr1	Chinchilla	terminal bouton		ISO	Ntsr1 (Rattus norvegicus)	9068941		RGD	PMID:10818259 and REF_RGD_ID:9743847

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Ntsr1	Chinchilla	G protein-coupled neurotensin receptor activity	enables	ISO	NTSR1 (Homo sapiens)	9068941	PMID:21725197	UniProt	PMID:21725197
Ntsr1	Chinchilla	G protein-coupled neurotensin receptor activity	enables	ISO	NTSR1 (Homo sapiens)	9068941	PMID:8381365	UniProt	PMID:8381365
Ntsr1	Chinchilla	identical protein binding		ISO	Ntsr1 (Rattus norvegicus)	9068941	homodimerization	RGD	PMID:17188644 and REF_RGD_ID:9743899
Ntsr1	Chinchilla	identical protein binding	enables	ISO	UniProtKB:P30989	9068941	PMID:17620610	IntAct	PMID:17620610
Ntsr1	Chinchilla	protein binding	enables	ISO	UniProtKB:P30990	9068941	PMID:17620610	IntAct	PMID:17620610
Ntsr1	Chinchilla	protein binding	enables	ISO	UniProtKB:P30990-PRO_0000019524	9068941	PMID:23597562	IntAct	PMID:23597562
Ntsr1	Chinchilla	protein binding		ISO	Nts (Rattus norvegicus)	9068941		RGD	PMID:16708210 and REF_RGD_ID:9727456
Ntsr1	Chinchilla	protein-containing complex binding		ISO	Ntsr2 (Rattus norvegicus)	9068941	heterodimerization	RGD	PMID:17188644 and REF_RGD_ID:9743899

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

PMID:22301074	PMID:30032202

Ntsr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955528	1,348,555 - 1,394,868 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955528	1,348,616 - 1,394,798 (-)	NCBI	ChiLan1.0	ChiLan1.0

NTSR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	62,708,836 - 62,762,771 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	62,708,836 - 62,762,771 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	61,340,188 - 61,394,123 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	60,810,634 - 60,864,568 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	60,810,633 - 60,864,567	NCBI
Celera	20	58,015,902 - 58,069,780 (+)	NCBI		Celera
Cytogenetic Map	20	q13.33	NCBI
HuRef	20	58,057,195 - 58,112,133 (+)	NCBI		HuRef
CHM1_1	20	61,240,216 - 61,294,517 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	64,507,559 - 64,561,762 (+)	NCBI		T2T-CHM13v2.0

Ntsr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	180,141,769 - 180,186,772 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	180,141,769 - 180,186,773 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	180,499,976 - 180,544,979 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	180,499,976 - 180,544,980 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	180,234,681 - 180,279,684 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	180,429,384 - 180,474,387 (+)	NCBI		MGSCv36	mm8
Celera	2	184,584,976 - 184,630,855 (+)	NCBI		Celera
Cytogenetic Map	2	H4	NCBI
cM Map	2	103.04	NCBI

Ntsr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	187,983,778 - 188,033,934 (+)	NCBI		GRCr8
mRatBN7.2	3	167,606,215 - 167,656,371 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	167,606,215 - 167,656,377 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	171,986,455 - 172,036,627 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	180,945,543 - 180,995,717 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	177,607,136 - 177,657,300 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	175,982,313 - 176,046,345 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	175,885,894 - 176,046,345 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	179,681,394 - 179,747,034 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	169,567,488 - 169,633,121 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	169,473,987 - 169,536,964 (+)	NCBI
Celera	3	164,925,618 - 164,973,840 (-)	NCBI		Celera
Cytogenetic Map	3	q43	NCBI

NTSR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	68,500,208 - 68,551,762 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	68,493,332 - 68,544,871 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	59,100,110 - 59,151,563 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	60,392,736 - 60,446,056 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	60,392,736 - 60,446,056 (+)	Ensembl	panpan1.1		panPan2

NTSR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	46,576,690 - 46,615,192 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	46,576,501 - 46,615,206 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	45,761,069 - 45,799,295 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	47,445,631 - 47,483,515 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	47,445,292 - 47,483,519 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	46,546,845 - 46,585,056 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	46,670,214 - 46,708,469 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	47,425,128 - 47,463,367 (+)	NCBI		UU_Cfam_GSD_1.0

Ntsr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	194,786,843 - 194,821,269 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936514	10,241,020 - 10,272,816 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936514	10,240,990 - 10,272,859 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NTSR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	61,989,402 - 62,033,548 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	61,989,601 - 62,038,299 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

NTSR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	1,466,965 - 1,521,681 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	1,469,378 - 1,521,323 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	49,354,595 - 49,410,303 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ntsr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	28,505,037 - 28,544,122 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	28,504,814 - 28,543,592 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005410013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01069561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01069562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01263293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000003785 ⟹ ENSCLAP00000003709

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955528	1,348,555 - 1,394,868 (-)	Ensembl

RefSeq Acc Id:

XM_005410013 ⟹ XP_005410070

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955528	1,348,616 - 1,394,798 (-)	NCBI

Sequence:

show sequence

GTCTGGAGATCGCGGGCAGCGCGGAGCCAGAGGAAGCGAGCAGCCGCCGGGTCTGAAGCCCGGAACCCACAGCCGGGAACCCGCAGCCGGGAGTCCAGAGGCGAGCAGCGCCCAGAGCCCCGGGCGGG
CGGCGCAGCCCGGTCCGGTCCGGTCCCGGTCCAGCGCTCCCCGGCTGGACGGCGCGCCCCTCAGCTCGGCACCCTCCCGGCCGGCTACTCTTCGTGTGTCGCCGCCGGAGGCGCTCCCGCCCTCAGCC
CGACTTCGCGCACCGGAGACCGAGACAAAGCCGGGACCCGGCTGCCCACCATGCGCCTCAACAGCTCCGCGCCTGGCACCCCCGGAGCGCAGGGCGCCCAGCCCTTCCCGCCGCCGCAGACCGGGCTG
GAGGAGGCGCTCCTGGCCCCGGGCTTCGCTAACGGCTCTGGCAACGCGTCGGAGCCCACCCTGGAAGCGCCCGGCAGCGAGCTGGACGTGAACACCGACATCTACTCCAAGGTGCTGGTGACCGCGGT
GTATCTGGCGCTCTTCGTGGTGGGCACGGTGGGCAACGCGGTGACTGCTTTCACACTGGCGCGCAAGAAGTCGCTGCAGAGCCTGCAGAGCACGGTGCACTACCACCTGGGCAGCCTGGCGCTGTCCG
ACCTGCTCATCCTGCTGCTCGCCATGCCGGTGGAGCTGTACAACTTCATTTGGGTGCACCACCCCTGGGCCTTCGGGGACGCGGGCTGCCGCGGCTACTACTTCCTGCGGGATGCCTGCACCTACGCC
ACGGCCCTCAACGTGGCCAGCCTGAGCGTGGAGCGCTACCTGGCCATCTGCCACCCCTTCAAGGCCAAGACGCTCATGTCCCGCAGCCGCACCAAGAAGTTCATCAGTGCCATCTGGCTGGCCTCGGG
GCTGCTGGCCGTGCCCATGCTCTTCACCATGGGCCAGCAGAACCGCAGCGCGGACGGCCAGCACCCCGGGGGTCTGGTGTGCACACCCACCGTGGACACGGCCACCGTCAAGGTCGTCATCCAGGTCA
ACACCTTCATGTCCTTCGTGTTCCCCATGGTGGTCATCTCCGTCCTGAACACCATCATTGCGAACAAGCTGACCGTCATGGTGCGCCAGGCTGCGGAGCAGGGGACGCAGCCCGGCACGTTCAGCATG
TCCATCGAGCCTGGCAGGATCCAGGCCCTGCGCCACGGCGTCCGCGTCCTCCGCGCCGTGGTCATTGCCTTCGTGGTCTGCTGGCTGCCCTACCACGTGCGCCGCCTCATGTTCTGCTACATCTCGGA
TGAGCAGTGGACACCGTTCCTCTACGACTTCTACCACTACTTCTACATGCTGACCAACACGCTCTTCTACGTCAGCTCCACCATCAACCCCGTGCTGTACAACCTCGTCTCCGCCAACTTCCGCCAGA
TCTTCCTGTCCACCCTGGCCTGCCTCTGTCCTGCCTGGCGGCGCCGGAGGAAGAGGCCGGTGTTCTCTCGGAAGACCAACAGCGTGTCCAGCAACCACGGCTTCTCCAGCAGCGCCACCCGGGAGACG
CTGTACTAAGACCCACGGGCCCGAGAGGCCACGGAGGCCACAGAGGCAACAGGGTGGCGGCTCAGCCTCCCAGGCCTGGCCCTCGCCTCAGCCAGAGGCCCTTTCTCCTCCACTTCTTCCCGCAGCCC
AGCCCTCTCCTCTCCTTCACCCCCCGCCCCCCTCCCGCTCAACACCGGAACGCAGAGCCTGTTCCTTTCCTGGATCCCAGGCGGCCTTGGATTCGGGCTCAGAGAACTGCGGCTTTCTCTGTTCCCAG
ACTAATGGACTTTTAGAGAGAAAAAGGAGGTGAAAGGAGTGTCCTGGGCTGGGTTCAGGGCAGCCCCTCCACAGCCCCCCTGGAGAATTCCGCTGTCCGCCCGCCCAGCTCCATTTTCGCCAGAGGCT
GCAGGCCCCACCCACCTCCCGCCCCTGGCCCAGCTCAGGCGAATCCAGCCCCAGGCCCGGGCACTGTGGTTCTGGGCCTCCTACCCAACTCTTCTATGCGGGCATCCCAGGAGCCCTGGAACTGCTCC
AGGCCTGGGCCCGTGCTGAGGGTGAGAGCACTCCTCCCCTGCCCTCGCCCTGGGGTGTCTGTGGCCCACAGAGGTGATCGAGGCTCCCACCCGCACAGAAAGGACAAAAGGCCCTGACCTGTGAGAGC
CTAGACCTGGGCCGCCCCCCAACCCGGCCTTGCCCAGGCCAAGACCCAAGACGCCCTGTGTGGACATGAGGCGGAAGGACACTGGAGCTGGGGCCCTGTGGAGCGGCAGAGCAGGGGAACCTCTTCCC
CAGCCCAGGCGGCCGTGGCCGGGCTGGCTGATCCCCCAGCACACAGTGGCAGCCAGCGGAGCCGAGCTGGCCTGGGGGTGGGGCTCTGACAAGGGGTCACATGGGCCGGCTGGCAGGACCCGGGCAGG
AGCAGGTAGAAAGCTGGGACCGAGTGTGCGGCACCCCAGCTGGCGGCCGCTCCAGGCCGGGACAGGTTCATTTGTCAGCAGCCGCCAGGCAGCTGCCCTGACCCCCAGCTCCAGACGCCGGGAAAGCA
GGCGCCTCCGCGGTCTCCGGGAGCTGTCTCCAAACAGGACGGGACCTGCCCAGGCGCCCTGCAGAGACAGGCAGGGGCTGCAGTAACAGAACAGACCCAGAAAGCACGACCTGGCCTTAAGAGGAGGT
TTTATGGTCTTAGGGCCCCACCTGCCCAGGAGGAAACCCAAGCACGGGCAGGCAGCCTGCAGAGACAGCACTGGCCTGGGAGGCAGAGCCAGTCCCGTCTGGGGCAGCCCTGTTCCCTCTGGACTGTG
AAATGCTGAGCTACAGACCAGGTTATGAGTGAGTGGCCACCCAGACCTGGCCACCCTGCCATGGGTGGGTGTGGTACTCAAAGCCACAAAATCCCTCTGAGAGCCACATGAACCTTCAGGTCACCAGG
GCGGGGCCAGTGCAAGCCAGGCCCATTTGCTGACCCCAAGGAGGACCTTCACCTTGACCTCCACAGGGCCTGCAGAGGTCAGTGTGGTGCCCCTGCTTGGGGCTGGGCTCAGAGTTCAGCAAATCCAA
AGGCCTGAGGCTGGGTGTGGGCATCAGAGTCTGAAGCAGCACTGAACTTGGAACCGGATGCTCCAGCCCCAGAGCCCTGCCTGCCTGGGCTCTCCAGACTGTGGGGCCATGATTCCGCCTAGCCTCAG
TGTCTCCATCTCAGACACAAGCACAGCCATTTTACTCTTGTCTGGTCGGGGCTGTCCTGGAGACTGTGGCCCGGAATGGAAGGAAGGGACAAACCCTGAGGGGCCTCCGATGCTGACGGCACAGGTCT
GCAGGGGGAGTGAGCTGCAGCCTGCGTTCTCGTCCTGCTGTCTTTACACTCGTGTCCTTGTGCGTGGTGTAGAAAGGGGCACATGGGCCCTCACTCTGGGCCTCACTCTTGGCCTGTCACAGTGGCGC
TCTGAGGGCTTAGCCCCGTGTGCCGAGAGTTCATGCCCCAGGGAGTGCAGAGTCCCAGGAGCCCAGATGTGGTGGCAACTCCCATCGTGTGCCTCAGACATCCCTCCGTGTGCACCCCGCTCCGTGCT
GCAACCAGAGTGCAAACCCCCCTATCTCTCAATAAAGGAGCCTGTGGACCCCCGGCTTGGACTCTTACGTAAGGGCCTAGGAGCAGCCATCTTTCCTCTCATTCATTCATTCATTCAGACAGGGCCTG
CAGCAGTGGACAGCTGTCCACTCACCTCTCTTGTCAAACCACACAGGCATGGGTCCCATCTCCCTAGGCCCCCGCCTCCCTCTGCTC

hide sequence


Protein RefSeqs	XP_005410070	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000003709
	ENSCLAP00000003709.1

RefSeq Acc Id:

XP_005410070 ⟸ XM_005410013

- UniProtKB:

A0A8C2UVE3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRLNSSAPGTPGAQGAQPFPPPQTGLEEALLAPGFANGSGNASEPTLEAPGSELDVNTDIYSKVLVTAVYLALFVVGTVGNAVTAFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFI
WVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASGLLAVPMLFTMGQQNRSADGQHPGGLVCTPTVDTATVKVVIQVNTFMSFVFPMVVISVLN
TIIANKLTVMVRQAAEQGTQPGTFSMSIEPGRIQALRHGVRVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTPFLYDFYHYFYMLTNTLFYVSSTINPVLYNLVSANFRQIFLSTLACLCPAWRRRR
KRPVFSRKTNSVSSNHGFSSSATRETLY

hide sequence

Ensembl Acc Id:

ENSCLAP00000003709 ⟸ ENSCLAT00000003785

Protein Domains

G-protein coupled receptors family 1 profile

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000002645	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000003785	ENTREZGENE
	ENSCLAT00000003785.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	NT1_rcpt	UniProtKB/TrEMBL
	NT_rcpt	UniProtKB/TrEMBL
NCBI Gene	Ntsr1	ENTREZGENE
PANTHER	G-PROTEIN COUPLED RECEPTOR	UniProtKB/TrEMBL
	NEUROTENSIN RECEPTOR TYPE 1	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	NEUROTENSINR	UniProtKB/TrEMBL
	NEUROTENSN1R	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A8C2UVE3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-09-13	Ntsr1	neurotensin receptor 1		neurotensin receptor 1 (high affinity)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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