Pik3c2g (phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma) - Rat Genome Database

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Gene: Pik3c2g (phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma) Chinchilla lanigera
Analyze
Symbol: Pik3c2g
Name: phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
RGD ID: 8772562
Description: ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); INVOLVED IN chemotaxis (ortholog); phosphatidylinositol-3-phosphate biosynthetic process (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); genetic disease (ortholog); spermatogenic failure 17 (ortholog); FOUND IN membrane (ortholog); nuclear envelope (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit gamma; phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541314,454,377 - 14,764,558 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541314,454,376 - 14,764,323 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Pik3c2g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541314,454,377 - 14,764,558 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541314,454,376 - 14,764,323 (+)NCBIChiLan1.0ChiLan1.0
PIK3C2G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381218,242,961 - 18,726,817 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1218,242,961 - 18,648,416 (+)EnsemblGRCh38hg38GRCh38
GRCh371218,414,452 - 18,801,350 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361218,305,741 - 18,692,617 (+)NCBINCBI36Build 36hg18NCBI36
Build 341218,305,740 - 18,692,615NCBI
Celera1223,559,670 - 23,946,872 (+)NCBICelera
Cytogenetic Map12p12.3NCBI
HuRef1218,182,567 - 18,569,771 (+)NCBIHuRef
CHM1_11218,379,684 - 18,766,393 (+)NCBICHM1_1
T2T-CHM13v2.01218,118,895 - 18,602,723 (+)NCBIT2T-CHM13v2.0
Pik3c2g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396139,591,070 - 139,915,010 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6139,564,219 - 139,915,010 (+)EnsemblGRCm39 Ensembl
GRCm386139,614,072 - 139,969,284 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6139,587,221 - 139,969,284 (+)EnsemblGRCm38mm10GRCm38
MGSCv376139,664,380 - 139,917,805 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv376139,562,593 - 139,605,759 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366139,678,267 - 139,931,692 (+)NCBIMGSCv36mm8
Celera6142,714,228 - 143,033,452 (+)NCBICelera
Cytogenetic Map6G2NCBI
cM Map669.7NCBI
Pik3c2g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84174,215,527 - 174,583,378 (+)NCBIGRCr8
mRatBN7.24172,483,752 - 172,851,623 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4172,484,345 - 172,850,544 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4178,779,339 - 179,145,536 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04174,563,498 - 174,929,713 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04173,184,038 - 173,550,261 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04173,732,196 - 174,102,502 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4173,732,248 - 174,102,496 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04237,973,381 - 238,271,814 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.04238,344,297 - 238,356,116 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44176,712,201 - 177,074,095 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14176,957,324 - 177,319,218 (+)NCBI
Celera4161,042,817 - 161,401,470 (+)NCBICelera
Cytogenetic Map4q44NCBI
PIK3C2G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21023,702,676 - 24,088,671 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11223,699,436 - 24,085,421 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01218,258,487 - 18,644,464 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11218,664,539 - 19,030,778 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1218,664,631 - 19,030,493 (+)Ensemblpanpan1.1panPan2
PIK3C2G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12728,446,629 - 28,818,198 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2728,424,899 - 28,796,902 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2717,634,256 - 18,004,900 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02728,777,707 - 29,148,879 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2728,777,942 - 29,120,607 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12728,624,760 - 28,982,990 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02728,617,093 - 28,982,011 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02717,346,838 - 17,712,725 (+)NCBIUU_Cfam_GSD_1.0
Pik3c2g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494589,681,373 - 90,001,143 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365487,604,404 - 7,856,872 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365487,604,272 - 7,923,984 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIK3C2G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl554,474,622 - 54,849,512 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1554,474,623 - 54,849,520 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2557,747,735 - 58,146,257 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIK3C2G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11118,099,328 - 18,500,030 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1118,118,717 - 18,499,985 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606916,715,340 - 17,100,145 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pik3c2g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475219,876,933 - 20,212,907 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475219,878,095 - 20,212,872 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023673   ⟹   ENSCLAP00000023452
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541314,454,377 - 14,764,558 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000023674   ⟹   ENSCLAP00000023453
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541314,454,377 - 14,764,558 (+)Ensembl
RefSeq Acc Id: XM_005379037   ⟹   XP_005379094
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541314,454,376 - 14,764,323 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005379038   ⟹   XP_005379095
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541314,454,376 - 14,764,323 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005379039   ⟹   XP_005379096
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541314,454,376 - 14,747,353 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005379094 (Get FASTA)   NCBI Sequence Viewer  
  XP_005379095 (Get FASTA)   NCBI Sequence Viewer  
  XP_005379096 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000023452
  ENSCLAP00000023452.1
  ENSCLAP00000023453
  ENSCLAP00000023453.1
Reference Protein Sequences
RefSeq Acc Id: XP_005379094   ⟸   XM_005379037
- Peptide Label: isoform X1
- UniProtKB: A0A8C2W0M8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005379095   ⟸   XM_005379038
- Peptide Label: isoform X2
- UniProtKB: A0A8C2W0P8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005379096   ⟸   XM_005379039
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCLAP00000023452   ⟸   ENSCLAT00000023673
RefSeq Acc Id: ENSCLAP00000023453   ⟸   ENSCLAT00000023674
Protein Domains
C2   C2 PI3K-type   PI3K-RBD   PI3K/PI4K catalytic   PIK helical   PX


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016083 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000023673 ENTREZGENE
  ENSCLAT00000023673.1 UniProtKB/TrEMBL
  ENSCLAT00000023674 ENTREZGENE
  ENSCLAT00000023674.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1070.11 UniProtKB/TrEMBL
  1.25.40.70 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
  3.30.1520.10 UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/TrEMBL
  C2_dom UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  PI3/4_kinase_cat_dom UniProtKB/TrEMBL
  PI3/4_kinase_cat_sf UniProtKB/TrEMBL
  PI3/4_kinase_CS UniProtKB/TrEMBL
  PI3K-C2-gamma_dom UniProtKB/TrEMBL
  PI3K-type_C2_dom UniProtKB/TrEMBL
  PI3K_accessory_dom UniProtKB/TrEMBL
  PI3K_accessory_sf UniProtKB/TrEMBL
  PI3K_Ras-bd_dom UniProtKB/TrEMBL
  PI_Kinase UniProtKB/TrEMBL
  PX_dom UniProtKB/TrEMBL
  PX_dom_sf UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/TrEMBL
NCBI Gene Pik3c2g ENTREZGENE
PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 3-KINASE C2 DOMAIN-CONTAINING SUBUNIT GAMMA UniProtKB/TrEMBL
  PTHR10048 UniProtKB/TrEMBL
Pfam PF00168 UniProtKB/TrEMBL
  PF00787 UniProtKB/TrEMBL
  PI3_PI4_kinase UniProtKB/TrEMBL
  PI3K_C2 UniProtKB/TrEMBL
  PI3K_rbd UniProtKB/TrEMBL
  PI3Ka UniProtKB/TrEMBL
PROSITE C2_PI3K UniProtKB/TrEMBL
  PI3_4_KINASE_1 UniProtKB/TrEMBL
  PI3_4_KINASE_2 UniProtKB/TrEMBL
  PI3_4_KINASE_3 UniProtKB/TrEMBL
  PI3K_RBD UniProtKB/TrEMBL
  PIK_HELICAL UniProtKB/TrEMBL
  PS50004 UniProtKB/TrEMBL
  PS50195 UniProtKB/TrEMBL
SMART PI3K_C2 UniProtKB/TrEMBL
  PI3Ka UniProtKB/TrEMBL
  PI3Kc UniProtKB/TrEMBL
  SM00239 UniProtKB/TrEMBL
  SM00312 UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
  SSF49562 UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
  SSF64268 UniProtKB/TrEMBL
UniProt A0A8C2W0M8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2W0P8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Pik3c2g  phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma    phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma  Symbol and/or name change 5135510 APPROVED