Entpd1 (ectonucleoside triphosphate diphosphohydrolase 1) - Rat Genome Database

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Gene: Entpd1 (ectonucleoside triphosphate diphosphohydrolase 1) Chinchilla lanigera
Analyze
Symbol: Entpd1
Name: ectonucleoside triphosphate diphosphohydrolase 1
RGD ID: 8718430
Description: ENCODES a protein that exhibits ADP phosphatase activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN ADP catabolic process (ortholog); cellular response to aluminum ion (ortholog); cellular response to interferon-alpha (ortholog); ASSOCIATED WITH agammaglobulinemia 4 (ortholog); autosomal dominant cutis laxa 3 (ortholog); demyelinating disease (ortholog); FOUND IN basement membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555072,036,050 - 2,137,377 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555072,035,918 - 2,141,327 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Entpd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555072,036,050 - 2,137,377 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555072,035,918 - 2,141,327 (+)NCBIChiLan1.0ChiLan1.0
ENTPD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381095,694,186 - 95,877,266 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1095,711,779 - 95,877,266 (+)EnsemblGRCh38hg38GRCh38
GRCh371097,471,521 - 97,637,023 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361097,461,526 - 97,627,013 (+)NCBINCBI36Build 36hg18NCBI36
Build 341097,505,905 - 97,616,454NCBI
Celera1091,256,620 - 91,378,232 (+)NCBICelera
Cytogenetic Map10q24.1NCBI
HuRef1091,099,222 - 91,264,599 (+)NCBIHuRef
CHM1_11097,753,378 - 97,918,865 (+)NCBICHM1_1
T2T-CHM13v2.01096,573,293 - 96,756,364 (+)NCBIT2T-CHM13v2.0
Entpd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391940,600,810 - 40,730,046 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1940,600,810 - 40,730,046 (+)EnsemblGRCm39 Ensembl
GRCm381940,612,366 - 40,741,602 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1940,612,366 - 40,741,602 (+)EnsemblGRCm38mm10GRCm38
MGSCv371940,734,284 - 40,816,092 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361940,751,297 - 40,794,913 (+)NCBIMGSCv36mm8
Celera1941,460,982 - 41,543,158 (+)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1934.25NCBI
Entpd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81249,374,810 - 249,502,310 (+)NCBIGRCr8
mRatBN7.21239,425,515 - 239,552,323 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1239,425,430 - 239,552,317 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1247,609,333 - 247,694,716 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01254,313,067 - 254,391,812 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01246,966,100 - 247,044,845 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01259,692,020 - 259,818,922 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1259,739,955 - 259,819,494 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01267,183,177 - 267,259,665 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01267,401,518 - 267,432,848 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41245,783,750 - 245,887,419 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11245,894,247 - 246,001,894 (+)NCBI
Celera1235,318,582 - 235,397,159 (+)NCBICelera
Cytogenetic Map1q54NCBI
ENTPD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28107,597,147 - 107,804,840 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110107,602,465 - 107,811,326 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01092,365,267 - 92,511,852 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11095,871,671 - 95,983,257 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1095,828,094 - 95,983,257 (+)Ensemblpanpan1.1panPan2
ENTPD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1289,181,851 - 9,311,835 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl289,211,050 - 9,323,939 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha289,357,708 - 9,489,400 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0289,444,087 - 9,575,820 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl289,475,293 - 9,595,910 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1289,160,534 - 9,292,221 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0289,220,048 - 9,351,993 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0289,363,303 - 9,495,027 (+)NCBIUU_Cfam_GSD_1.0
ENTPD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14107,263,449 - 107,389,010 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114107,263,546 - 107,390,923 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214116,897,330 - 117,022,541 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ENTPD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1988,921,826 - 89,034,418 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl988,922,007 - 89,032,880 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604849,731,265 - 49,906,385 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Entpd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247377,084,818 - 7,191,918 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247377,011,792 - 7,193,903 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Ensembl Acc Id: ENSCLAT00000003859   ⟹   ENSCLAP00000003783
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555072,036,050 - 2,137,377 (+)Ensembl
RefSeq Acc Id: XM_005407549   ⟹   XP_005407606
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555072,036,367 - 2,141,327 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005407551   ⟹   XP_005407608
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555072,087,037 - 2,141,327 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005407553   ⟹   XP_005407610
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555072,035,918 - 2,141,327 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013506151   ⟹   XP_013361605
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555072,035,918 - 2,141,327 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013506153   ⟹   XP_013361607
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555072,036,579 - 2,141,327 (+)NCBI
Sequence:
RefSeq Acc Id: XP_005407610   ⟸   XM_005407553
- Peptide Label: isoform X4
- UniProtKB: A0A8C2USU2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005407606   ⟸   XM_005407549
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005407608   ⟸   XM_005407551
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013361605   ⟸   XM_013506151
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013361607   ⟸   XM_013506153
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSCLAP00000003783   ⟸   ENSCLAT00000003859


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000002693 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000003859 ENTREZGENE
  ENSCLAT00000003859.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.40 UniProtKB/TrEMBL
  Exopolyphosphatase. Domain 2 UniProtKB/TrEMBL
InterPro GDA1_CD39_NTPase UniProtKB/TrEMBL
NCBI Gene Entpd1 ENTREZGENE
PANTHER ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1 UniProtKB/TrEMBL
  PTHR11782 UniProtKB/TrEMBL
Pfam GDA1_CD39 UniProtKB/TrEMBL
PROSITE GDA1_CD39_NTPASE UniProtKB/TrEMBL
UniProt A0A8C2USU2 ENTREZGENE, UniProtKB/TrEMBL