Avpr1b (arginine vasopressin receptor 1B) - Rat Genome Database

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Gene: Avpr1b (arginine vasopressin receptor 1B) Chinchilla lanigera
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Symbol: Avpr1b
Name: arginine vasopressin receptor 1B
RGD ID: 9007267
Description: ENCODES a protein that exhibits identical protein binding (ortholog); peptide hormone binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN activation of phospholipase C activity (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: vasopressin V1b receptor
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540641,705,305 - 41,716,173 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540641,706,088 - 41,716,173 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Avpr1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540641,705,305 - 41,716,173 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540641,706,088 - 41,716,173 (-)NCBIChiLan1.0ChiLan1.0
AVPR1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1206,106,936 - 206,117,699 (-)EnsemblGRCh38hg38GRCh38
GRCh381206,106,936 - 206,117,388 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371206,223,943 - 206,234,395 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361204,390,567 - 204,398,262 (+)NCBINCBI36hg18NCBI36
Build 341202,767,010 - 202,774,698NCBI
Celera1179,215,868 - 179,223,067 (-)NCBI
Cytogenetic Map1q32.1NCBI
HuRef1177,157,341 - 177,164,470 (+)NCBIHuRef
CHM1_11207,555,388 - 207,562,587 (-)NCBICHM1_1
Avpr1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391131,526,852 - 131,539,738 (+)NCBIGRCm39mm39
GRCm39 Ensembl1131,526,977 - 131,539,738 (+)Ensembl
GRCm381131,599,114 - 131,612,000 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1131,599,239 - 131,612,000 (+)EnsemblGRCm38mm10GRCm38
MGSCv371133,495,691 - 133,508,577 (+)NCBIGRCm37mm9NCBIm37
MGSCv361133,426,660 - 133,439,546 (+)NCBImm8
Celera1134,211,156 - 134,224,033 (+)NCBICelera
Cytogenetic Map1E4NCBI
Avpr1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21343,046,960 - 43,057,110 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1343,046,267 - 43,057,792 (+)Ensembl
Rnor_6.01348,390,434 - 48,400,583 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1348,367,307 - 48,378,831 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1348,390,417 - 48,400,632 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01353,465,718 - 53,475,867 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map13q13NCBI
AVPR1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11185,996,869 - 186,007,043 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1185,999,627 - 186,007,043 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01181,713,548 - 181,723,645 (-)NCBIMhudiblu_PPA_v0panPan3
AVPR1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1382,440,574 - 2,446,037 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl382,440,615 - 2,446,037 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha382,527,072 - 2,539,143 (-)NCBI
ROS_Cfam_1.0382,432,354 - 2,444,078 (-)NCBI
UMICH_Zoey_3.1382,426,053 - 2,437,770 (-)NCBI
UNSW_CanFamBas_1.0382,818,206 - 2,830,306 (-)NCBI
UU_Cfam_GSD_1.0383,018,527 - 3,030,626 (-)NCBI
Avpr1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934469,175,333 - 69,183,581 (+)NCBI
SpeTri2.0NW_0049365576,415,544 - 6,423,863 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AVPR1B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl966,772,591 - 66,776,931 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1966,769,472 - 66,776,916 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2973,019,057 - 73,024,469 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AVPR1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12523,234,651 - 23,244,403 (+)NCBI
ChlSab1.1 Ensembl2523,234,823 - 23,241,159 (+)Ensembl
Vero_WHO_p1.0NW_02366605523,931,432 - 23,942,062 (+)NCBI
Avpr1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248075,237,036 - 5,247,383 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000020429   ⟹   ENSCLAP00000020233
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540641,705,305 - 41,716,173 (-)Ensembl
RefSeq Acc Id: XM_005375385   ⟹   XP_005375442
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540641,706,088 - 41,716,173 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013523068   ⟹   XP_013378522
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540641,709,433 - 41,716,173 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005375442 (Get FASTA)   NCBI Sequence Viewer  
  XP_013378522 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005375442   ⟸   XM_005375385
- Sequence:
RefSeq Acc Id: XP_013378522   ⟸   XM_013523068
- Sequence:
RefSeq Acc Id: ENSCLAP00000020233   ⟸   ENSCLAT00000020429


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000013862 Ensembl
NCBI Gene Avpr1b ENTREZGENE