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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA polymerase II transcription regulator complex
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Accession:GO:0090575 term browser browse the term
Definition:A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase II.
Synonyms:narrow_synonym: RNA polymerase II transcription factor complex


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RNA polymerase II transcription regulator complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADNP activity dependent neuroprotector homeobox part_of IDA (PMID:29795351) ARUK-UCL PMID:29795351 NCBI chr20:50,888,918...50,931,437
Ensembl chr20:50,888,916...50,931,437 		JBrowse link
G ANXA2 annexin A2 part_of
located_in		 IEA
EXP		 (PMID:23415230) Ensembl
ComplexPortal		 PMID:23415230 GO_REF:0000107 NCBI chr15:60,347,151...60,397,986
Ensembl chr15:60,347,134...60,402,883 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator part_of IDA (PMID:7539918), (PMID:8756616) BHF-UCL PMID:7539918 PMID:8756616 NCBI chr 1:150,809,713...150,876,599
Ensembl chr 1:150,809,713...150,876,708 		JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513 		JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr11:2,268,498...2,270,588
Ensembl chr11:2,268,498...2,270,588 		JBrowse link
G ASCL3 achaete-scute family bHLH transcription factor 3 part_of IBA GO_Central GO_REF:0000033 NCBI chr11:8,937,578...8,943,016
Ensembl chr11:8,937,578...8,943,016 		JBrowse link
G ASCL4 achaete-scute family bHLH transcription factor 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr12:107,774,704...107,776,644
Ensembl chr12:107,774,704...107,776,644 		JBrowse link
G ASCL5 achaete-scute family bHLH transcription factor 5 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:201,113,943...201,127,184
Ensembl chr 1:201,113,943...201,127,184 		JBrowse link
G ATF1 activating transcription factor 1 located_in
part_of		 IPI
ISO
IEA		 (PMID:20102225) ComplexPortal
Ensembl		 PMID:20102225 GO_REF:0000107 GO_REF:0000114 NCBI chr12:50,763,459...50,821,162
Ensembl chr12:50,763,710...50,821,162 		JBrowse link
G ATF2 activating transcription factor 2 located_in IPI
EXP		 (PMID:20102225), (PMID:23661758), (PMID:28186491)
(PMID:11231009)		 ComplexPortal PMID:11231009 PMID:20102225 PMID:23661758 PMID:28186491 NCBI chr 2:175,072,259...175,168,203
Ensembl chr 2:175,072,250...175,168,382 		JBrowse link
G ATF3 activating transcription factor 3 located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr 1:212,565,407...212,620,777
Ensembl chr 1:212,565,334...212,620,777 		JBrowse link
G ATF4 activating transcription factor 4 located_in
part_of		 IPI
ISO
IEA		 (PMID:20102225), (PMID:23661758) ComplexPortal
Ensembl		 PMID:20102225 PMID:23661758 GO_REF:0000107 GO_REF:0000114 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683 		JBrowse link
G ATF5 activating transcription factor 5 located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr19:49,928,906...49,933,935
Ensembl chr19:49,928,702...49,933,935 		JBrowse link
G ATF6 activating transcription factor 6 located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr 1:161,766,320...161,964,070
Ensembl chr 1:161,766,298...161,977,574 		JBrowse link
G ATF6B activating transcription factor 6 beta part_of
located_in		 IDA
IPI		 (PMID:11256944)
(PMID:23661758)		 NTNU_SB
ComplexPortal		 PMID:11256944 PMID:23661758 NCBI chr 6:32,115,264...32,128,246
Ensembl chr 6:32,115,264...32,128,253 		JBrowse link
G ATF7 activating transcription factor 7 located_in IPI (PMID:20102225) ComplexPortal PMID:20102225 NCBI chr12:53,507,856...53,626,382
Ensembl chr12:53,507,856...53,626,410 		JBrowse link
G BACH1 BTB domain and CNC homolog 1 located_in IPI
ISS
NAS		 (PMID:20102225), (PMID:23661758)
(PMID:23661758)		 ComplexPortal PMID:20102225 PMID:23661758 GO_REF:0000114 NCBI chr21:29,298,922...29,361,894
Ensembl chr21:29,194,071...29,630,751 		JBrowse link
G BACH2 BTB domain and CNC homolog 2 located_in IPI
ISS		 (PMID:22194330), (PMID:23661758) ComplexPortal PMID:22194330 PMID:23661758 GO_REF:0000114 NCBI chr 6:89,926,528...90,296,843
Ensembl chr 6:89,926,528...90,296,843 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr14:75,522,469...75,546,992
Ensembl chr14:75,522,455...75,546,993 		JBrowse link
G BATF2 basic leucine zipper ATF-like transcription factor 2 located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr11:64,987,945...64,996,971
Ensembl chr11:64,987,945...64,997,018 		JBrowse link
G BATF3 basic leucine zipper ATF-like transcription factor 3 located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr 1:212,686,417...212,699,840
Ensembl chr 1:212,686,417...212,699,840 		JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 part_of ISO (PMID:22977234) MGI PMID:22977234 NCBI chr19:10,871,553...10,923,075
Ensembl chr19:10,871,553...10,923,075 		JBrowse link
G CBX3 chromobox 3 part_of IDA (PMID:29795351) ARUK-UCL PMID:29795351 NCBI chr 7:26,201,443...26,213,607
Ensembl chr 7:26,201,162...26,213,607 		JBrowse link
G CEBPA CCAAT enhancer binding protein alpha located_in
part_of		 IPI
IEA
IMP		 (PMID:20102225), (PMID:23661758)
(PMID:16946298)		 ComplexPortal
UniProt
BHF-UCL		 PMID:16946298 PMID:20102225 PMID:23661758 GO_REF:0000117 NCBI chr19:33,299,934...33,302,534
Ensembl chr19:33,299,934...33,302,534 		JBrowse link
G CEBPB CCAAT enhancer binding protein beta located_in
part_of		 IPI
IEA
EXP		 (PMID:20102225)
(PMID:11792321)		 ComplexPortal
UniProt
Ensembl		 PMID:11792321 PMID:20102225 GO_REF:0000107 GO_REF:0000117 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,830...50,192,668 		JBrowse link
G CEBPD CCAAT enhancer binding protein delta located_in
part_of		 IPI
IEA
NAS		 (PMID:20102225) ComplexPortal
UniProt		 PMID:20102225 GO_REF:0000117 NCBI chr 8:47,736,913...47,738,164
Ensembl chr 8:47,736,913...47,738,164 		JBrowse link
G CEBPE CCAAT enhancer binding protein epsilon located_in
part_of		 IPI
IEA		 (PMID:23661758), (PMID:28186491) ComplexPortal
UniProt		 PMID:23661758 PMID:28186491 GO_REF:0000117 NCBI chr14:23,117,306...23,119,255
Ensembl chr14:23,117,036...23,120,256 		JBrowse link
G CEBPG CCAAT enhancer binding protein gamma located_in
part_of		 IPI
IEA		 (PMID:20102225), (PMID:23661758) ComplexPortal
UniProt		 PMID:20102225 PMID:23661758 GO_REF:0000117 NCBI chr19:33,373,709...33,382,686
Ensembl chr19:33,373,685...33,382,686 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 part_of IDA (PMID:29795351) ARUK-UCL PMID:29795351 NCBI chr12:6,570,082...6,607,379
Ensembl chr12:6,570,082...6,614,524 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 located_in
part_of		 IPI
ISO
IEA		 (PMID:20102225) ComplexPortal
Ensembl		 PMID:20102225 GO_REF:0000107 GO_REF:0000114 NCBI chr 2:207,529,962...207,605,988
Ensembl chr 2:207,529,737...207,605,988 		JBrowse link
G CREB3 cAMP responsive element binding protein 3 located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr 9:35,732,666...35,736,999
Ensembl chr 9:35,732,598...35,736,999 		JBrowse link
G CREBBP CREB binding protein part_of ISO (PMID:22977234), (PMID:7913207) MGI PMID:7913207 PMID:22977234 NCBI chr16:3,725,054...3,880,713
Ensembl chr16:3,725,054...3,880,713 		JBrowse link
G CREBZF CREB/ATF bZIP transcription factor located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr11:85,657,990...85,682,863
Ensembl chr11:85,657,742...85,682,908 		JBrowse link
G CRX cone-rod homeobox part_of ISS ARUK-UCL GO_REF:0000024 NCBI chr19:47,821,937...47,843,324
Ensembl chr19:47,819,779...47,843,330 		JBrowse link
G CTNNB1 catenin beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G DBP D-box binding PAR bZIP transcription factor located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr19:48,630,030...48,637,379
Ensembl chr19:48,630,030...48,637,379 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 located_in
part_of		 IPI
IEA		 (PMID:20102225), (PMID:23661758) ComplexPortal
Ensembl		 PMID:20102225 PMID:23661758 GO_REF:0000107 NCBI chr12:57,516,588...57,520,517
Ensembl chr12:57,516,588...57,521,737 		JBrowse link
G DEAF1 DEAF1 transcription factor part_of ISO (PMID:9860983) MGI PMID:9860983 NCBI chr11:644,220...707,083
Ensembl chr11:644,233...707,118 		JBrowse link
G DR1 down-regulator of transcription 1 part_of IDA (PMID:8670811) ARUK-UCL PMID:8670811 NCBI chr 1:93,345,907...93,369,493
Ensembl chr 1:93,345,907...93,369,493 		JBrowse link
G DRAP1 DR1 associated protein 1 part_of IDA (PMID:8670811) ARUK-UCL PMID:8670811 NCBI chr11:65,919,426...65,921,563
Ensembl chr11:65,919,274...65,921,563 		JBrowse link
G E2F1 E2F transcription factor 1 located_in IPI (PMID:16360038) ComplexPortal PMID:16360038 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385 		JBrowse link
G E2F2 E2F transcription factor 2 part_of
located_in		 IDA
IBA
IEA
ISS		 (PMID:7739537) NTNU_SB
GO_Central
TreeGrafter
ComplexPortal		 PMID:7739537 GO_REF:0000033 GO_REF:0000114 GO_REF:0000118 NCBI chr 1:23,505,212...23,531,233
Ensembl chr 1:23,506,438...23,531,233 		JBrowse link
G E2F3 E2F transcription factor 3 part_of IDA
IEA
IBA		 (PMID:7739537) NTNU_SB
TreeGrafter
GO_Central		 PMID:7739537 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:20,401,879...20,493,714
Ensembl chr 6:20,401,879...20,493,714 		JBrowse link
G E2F4 E2F transcription factor 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr16:67,192,155...67,198,918
Ensembl chr16:67,192,155...67,198,918 		JBrowse link
G E2F5 E2F transcription factor 5 part_of IBA GO_Central GO_REF:0000033 NCBI chr 8:85,177,154...85,214,518
Ensembl chr 8:85,177,154...85,217,158 		JBrowse link
G E2F6 E2F transcription factor 6 part_of IDA
IEA
IBA		 (PMID:9501179) NTNU_SB
TreeGrafter
GO_Central		 PMID:9501179 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:11,444,375...11,466,161
Ensembl chr 2:11,444,375...11,466,177 		JBrowse link
G E2F7 E2F transcription factor 7 part_of IBA GO_Central GO_REF:0000033 NCBI chr12:77,021,251...77,065,569
Ensembl chr12:77,021,248...77,065,569 		JBrowse link
G E2F8 E2F transcription factor 8 part_of IBA GO_Central GO_REF:0000033 NCBI chr11:19,224,063...19,241,655
Ensembl chr11:19,224,063...19,241,620 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr14:75,278,828...75,282,230
Ensembl chr14:75,278,826...75,282,230 		JBrowse link
G FOSL1 FOS like 1, AP-1 transcription factor subunit located_in IPI (PMID:23661758), (PMID:28186491) ComplexPortal PMID:23661758 PMID:28186491 NCBI chr11:65,892,049...65,900,545
Ensembl chr11:65,892,049...65,900,573 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit located_in IPI (PMID:20102225) ComplexPortal PMID:20102225 NCBI chr 2:28,392,858...28,417,317
Ensembl chr 2:28,392,448...28,417,317 		JBrowse link
G GATA4 GATA binding protein 4 part_of IDA (PMID:9312027) BHF-UCL PMID:9312027 NCBI chr 8:11,676,935...11,760,002
Ensembl chr 8:11,676,959...11,760,002 		JBrowse link
G GTF2B general transcription factor IIB part_of IDA
IMP		 (PMID:1876184), (PMID:3029109)
(PMID:7601352)		 UniProt PMID:1876184 PMID:3029109 PMID:7601352 NCBI chr 1:88,852,633...88,891,567
Ensembl chr 1:88,852,633...88,891,944 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 part_of IDA (PMID:11802795) BHF-UCL PMID:11802795 NCBI chr 5:154,474,972...154,478,227
Ensembl chr 5:154,474,972...154,478,227 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha part_of IDA (PMID:7539918), (PMID:8756616) BHF-UCL PMID:7539918 PMID:8756616 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 part_of IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G HLF HLF transcription factor, PAR bZIP family member located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr17:55,264,960...55,325,187
Ensembl chr17:55,264,960...55,325,187 		JBrowse link
G HLTF helicase like transcription factor part_of
located_in		 IEA
EXP		 (PMID:23415230) Ensembl
ComplexPortal		 PMID:23415230 GO_REF:0000107 NCBI chr 3:149,030,063...149,086,533
Ensembl chr 3:149,030,127...149,086,554 		JBrowse link
G HMGA1 high mobility group AT-hook 1 part_of ISS BHF-UCL GO_REF:0000024 NCBI chr 6:34,236,873...34,246,231
Ensembl chr 6:34,236,873...34,246,231 		JBrowse link
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B part_of ISS BHF-UCL GO_REF:0000024 NCBI chr 5:178,204,533...178,211,163
Ensembl chr 5:178,204,533...178,211,163 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U located_in IDA (PMID:10490622) UniProt PMID:10490622 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560 		JBrowse link
G HOXB9 homeobox B9 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:48,621,156...48,626,358
Ensembl chr17:48,621,156...48,626,358 		JBrowse link
G HYAL2 hyaluronidase 2 part_of ISS
IEA		 (PMID:19366691) BHF-UCL
Ensembl		 PMID:19366691 GO_REF:0000107 NCBI chr 3:50,317,808...50,322,745
Ensembl chr 3:50,317,790...50,322,782 		JBrowse link
G JDP2 Jun dimerization protein 2 located_in EXP (PMID:11231009) ComplexPortal PMID:11231009 NCBI chr14:75,426,943...75,474,107
Ensembl chr14:75,427,716...75,474,111 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048 		JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr19:12,791,486...12,793,315
Ensembl chr19:12,791,486...12,793,315 		JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit located_in IPI (PMID:20102225) ComplexPortal PMID:20102225 NCBI chr19:18,279,694...18,281,622
Ensembl chr19:18,279,694...18,281,622 		JBrowse link
G LDB1 LIM domain binding 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr10:102,102,088...102,121,442
Ensembl chr10:102,106,489...102,120,368 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956 		JBrowse link
G LMO4 LIM domain only 4 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:87,328,880...87,348,923
Ensembl chr 1:87,328,880...87,348,923 		JBrowse link
G MAF MAF bZIP transcription factor located_in IPI
ISS		 (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 GO_REF:0000114 NCBI chr16:79,202,622...79,600,737
Ensembl chr16:79,585,843...79,600,737 		JBrowse link
G MAFB MAF bZIP transcription factor B located_in IPI
ISS		 (PMID:23661758) ComplexPortal PMID:23661758 GO_REF:0000114 NCBI chr20:40,685,848...40,689,236
Ensembl chr20:40,685,848...40,689,236 		JBrowse link
G MAFF MAF bZIP transcription factor F located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr22:38,201,994...38,216,511
Ensembl chr22:38,200,767...38,216,507 		JBrowse link
G MAFG MAF bZIP transcription factor G located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr17:81,918,270...81,931,244
Ensembl chr17:81,918,270...81,927,735 		JBrowse link
G MAFK MAF bZIP transcription factor K located_in ISS ComplexPortal GO_REF:0000114 NCBI chr 7:1,530,702...1,543,043
Ensembl chr 7:1,530,702...1,543,043 		JBrowse link
G MAX MYC associated factor X part_of IDA
IBA
IEA		 (PMID:8425219), (PMID:8521822) NTNU_SB
GO_Central
TreeGrafter		 PMID:8425219 PMID:8521822 GO_REF:0000033 GO_REF:0000118 NCBI chr14:65,006,101...65,102,695
Ensembl chr14:65,006,174...65,102,695 		JBrowse link
G MLXIPL MLX interacting protein like part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 7:73,593,202...73,647,907
Ensembl chr 7:73,593,194...73,624,543 		JBrowse link
G MXD3 MAX dimerization protein 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:177,305,499...177,312,752
Ensembl chr 5:177,301,461...177,312,757 		JBrowse link
G MXD4 MAX dimerization protein 4 part_of ISO (MGI:77472|PMID:8521822) NTNU_SB PMID:8521822 MGI:77472 NCBI chr 4:2,247,432...2,262,109
Ensembl chr 4:2,247,432...2,262,109 		JBrowse link
G MXI1 MAX interactor 1, dimerization protein part_of IDA (PMID:8425219) NTNU_SB PMID:8425219 NCBI chr10:110,207,605...110,287,365
Ensembl chr10:110,207,605...110,287,365 		JBrowse link
G MYB MYB proto-oncogene, transcription factor located_in
part_of		 EXP
ISO		 (PMID:11792321)
(MGI:2158117|PMID:11792321)		 ComplexPortal
ComplexPortal		 PMID:11792321 MGI:2158117 NCBI chr 6:135,181,308...135,219,172
Ensembl chr 6:135,181,308...135,219,173 		JBrowse link
G MYF5 myogenic factor 5 part_of ISS (PMID:8035824) BHF-UCL PMID:8035824 NCBI chr12:80,716,912...80,719,671
Ensembl chr12:80,716,912...80,719,671 		JBrowse link
G MYF6 myogenic factor 6 part_of ISS BHF-UCL GO_REF:0000024 NCBI chr12:80,707,634...80,709,474
Ensembl chr12:80,707,634...80,709,474 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 located_in IDA (PMID:16373399) ComplexPortal PMID:16373399 NCBI chr 2:24,491,254...24,770,702
Ensembl chr 2:24,491,254...24,770,702 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 located_in NAS
EXP		 (PMID:9430642)
(PMID:15258145)		 ComplexPortal PMID:9430642 PMID:15258145 NCBI chr 8:70,109,782...70,456,446
Ensembl chr 8:70,109,782...70,403,808 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 part_of ISO (PMID:22977234) MGI PMID:22977234 NCBI chr20:47,501,887...47,656,872
Ensembl chr20:47,501,887...47,656,877 		JBrowse link
G NEUROD1 neuronal differentiation 1 part_of IDA (PMID:10545951) BHF-UCL PMID:10545951 NCBI chr 2:181,668,295...181,680,517
Ensembl chr 2:181,668,295...181,680,827 		JBrowse link
G NFE2 nuclear factor, erythroid 2 located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr12:54,292,111...54,301,015
Ensembl chr12:54,292,111...54,301,015 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr 2:177,230,303...177,264,727
Ensembl chr 2:177,218,667...177,392,756 		JBrowse link
G NFE2L3 NFE2 like bZIP transcription factor 3 located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr 7:26,152,198...26,187,137
Ensembl chr 7:26,152,198...26,187,137 		JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated located_in IPI (PMID:20102225), (PMID:23661758) ComplexPortal PMID:20102225 PMID:23661758 NCBI chr 9:91,409,045...91,483,497
Ensembl chr 9:91,409,045...91,423,832 		JBrowse link
G NFYA nuclear transcription factor Y subunit alpha part_of IDA (PMID:11256944) NTNU_SB PMID:11256944 NCBI chr 6:41,072,974...41,102,403
Ensembl chr 6:41,072,974...41,102,403 		JBrowse link
G NFYB nuclear transcription factor Y subunit beta part_of IDA (PMID:11256944) NTNU_SB PMID:11256944 NCBI chr12:104,117,086...104,138,210
Ensembl chr12:104,117,086...104,138,241 		JBrowse link
G NFYC nuclear transcription factor Y subunit gamma part_of IDA (PMID:11256944) NTNU_SB PMID:11256944 NCBI chr 1:40,691,704...40,771,603
Ensembl chr 1:40,691,648...40,771,603 		JBrowse link
G NKX2-5 NK2 homeobox 5 part_of IDA (PMID:9312027) BHF-UCL PMID:9312027 NCBI chr 5:173,232,109...173,235,206
Ensembl chr 5:173,232,109...173,235,311 		JBrowse link
G NONO non-POU domain containing octamer binding part_of IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:71,283,635...71,301,168
Ensembl chr  X:71,254,814...71,301,522 		JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 located_in
part_of		 IPI
IBA
ISS		 (PMID:27011007) ComplexPortal
GO_Central		 PMID:27011007 GO_REF:0000033 GO_REF:0000114 NCBI chr19:50,376,457...50,383,388
Ensembl chr19:50,329,653...50,383,388 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 part_of
located_in		 IEA
IBA
EXP
IPI
IDA		 (PMID:19167885)
(PMID:25416956)
(PMID:18511497)		 Ensembl
GO_Central
ComplexPortal
BHF-UCL		 PMID:18511497 PMID:19167885 PMID:25416956 GO_REF:0000033 GO_REF:0000107 NCBI chr11:47,248,300...47,269,033
Ensembl chr11:47,248,300...47,269,033 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr12:100,473,866...100,564,414
Ensembl chr12:100,473,708...100,564,414 		JBrowse link
G NR5A1 nuclear receptor subfamily 5 group A member 1 part_of ISS
IEA
IBA		 BHF-UCL
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:124,481,236...124,507,399
Ensembl chr 9:124,481,236...124,507,420 		JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 part_of ISS
IBA
IEA		 BHF-UCL
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:200,027,710...200,177,415
Ensembl chr 1:200,027,614...200,177,420 		JBrowse link
G PBX1 PBX homeobox 1 part_of IDA (PMID:9079637) NTNU_SB PMID:9079637 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296 		JBrowse link
G POU2AF1 POU class 2 homeobox associating factor 1 part_of IMP
IBA
IDA		 (PMID:10329190)
(PMID:11380252)		 CAFA
GO_Central		 PMID:10329190 PMID:11380252 GO_REF:0000033 NCBI chr11:111,352,255...111,379,275
Ensembl chr11:111,352,255...111,455,630 		JBrowse link
G POU2F1 POU class 2 homeobox 1 part_of IMP (PMID:10329190), (PMID:11380252) CAFA PMID:10329190 PMID:11380252 NCBI chr 1:167,220,885...167,427,345
Ensembl chr 1:167,220,876...167,427,345 		JBrowse link
G POU4F1 POU class 4 homeobox 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr13:78,598,362...78,603,552
Ensembl chr13:78,598,362...78,603,552 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma part_of
located_in		 IDA
EXP		 (PMID:9568716)
(PMID:15258145)
(PMID:16373399)		 BHF-UCL
ComplexPortal		 PMID:9568716 PMID:15258145 PMID:16373399 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356 		JBrowse link
G RARA retinoic acid receptor alpha located_in IDA
NAS		 (PMID:1310351)
(PMID:9430642)		 ComplexPortal PMID:1310351 PMID:9430642 NCBI chr17:40,309,180...40,357,643
Ensembl chr17:40,309,180...40,357,643 		JBrowse link
G RFX5 regulatory factor X5 part_of
located_in		 IPI (PMID:9806546)
(PMID:10938133)		 ARUK-UCL
ComplexPortal		 PMID:9806546 PMID:10938133 NCBI chr 1:151,340,640...151,347,252
Ensembl chr 1:151,340,640...151,347,326 		JBrowse link
G RFXANK regulatory factor X associated ankyrin containing protein part_of
located_in		 IPI (PMID:9806546)
(PMID:10938133)		 ARUK-UCL
ComplexPortal		 PMID:9806546 PMID:10938133 NCBI chr19:19,192,258...19,201,866
Ensembl chr19:19,192,229...19,201,869 		JBrowse link
G RFXAP regulatory factor X associated protein part_of
located_in		 IPI (PMID:9806546)
(PMID:10938133)
(PMID:9118943)		 GO_Central
ComplexPortal		 PMID:9118943 PMID:9806546 PMID:10938133 NCBI chr13:36,819,222...36,829,104
Ensembl chr13:36,819,222...36,829,104 		JBrowse link
G RXRA retinoid X receptor alpha located_in
part_of		 IDA
IBA
EXP
NAS
ISS
IPI		 (PMID:1310351), (PMID:26289479)
(PMID:19167885), (PMID:22474364)
(PMID:9430642)
(PMID:17426122), (PMID:18511497)
(PMID:10669605), (PMID:22179700)		 ComplexPortal
GO_Central
BHF-UCL		 PMID:1310351 PMID:9430642 PMID:10669605 PMID:17426122 PMID:18511497 More... GO_REF:0000033 GO_REF:0000114 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585 		JBrowse link
G RXRB retinoid X receptor beta located_in
part_of		 IPI
IBA
ISS		 (PMID:25416956), (PMID:27011007) ComplexPortal
GO_Central		 PMID:25416956 PMID:27011007 GO_REF:0000033 GO_REF:0000114 NCBI chr 6:33,193,588...33,200,853
Ensembl chr 6:33,193,588...33,200,665 		JBrowse link
G RXRG retinoid X receptor gamma part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:165,400,922...165,445,126
Ensembl chr 1:165,400,922...165,445,355 		JBrowse link
G S100A10 S100 calcium binding protein A10 part_of
located_in		 IEA
EXP		 (PMID:23415230) Ensembl
ComplexPortal		 PMID:23415230 GO_REF:0000107 NCBI chr 1:151,982,915...151,993,859
Ensembl chr 1:151,982,915...151,993,859 		JBrowse link
G SFPQ splicing factor proline and glutamine rich part_of ISS BHF-UCL GO_REF:0000024 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446 		JBrowse link
G SMAD4 SMAD family member 4 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,528...51,085,045 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 located_in IPI
NAS		 (PMID:8662591), (PMID:9630226)
(PMID:24058793)		 ComplexPortal PMID:8662591 PMID:9630226 PMID:24058793 NCBI chr 2:190,969,149...191,014,171
Ensembl chr 2:190,908,460...191,020,960 		JBrowse link
G STAT2 signal transducer and activator of transcription 2 located_in NAS (PMID:24058793) ComplexPortal PMID:24058793 NCBI chr12:56,341,597...56,360,107
Ensembl chr12:56,341,597...56,360,203 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 part_of
located_in		 IMP
IBA
NAS
IPI
IC		 (PMID:16946298)
(PMID:24058793)
(PMID:17676033), (PMID:8662591)
(PMID:16835372)		 BHF-UCL
GO_Central
ComplexPortal		 PMID:8662591 PMID:16835372 PMID:16946298 PMID:17676033 PMID:24058793 GO_REF:0000033 NCBI chr17:42,313,324...42,388,442
Ensembl chr17:42,313,324...42,388,568 		JBrowse link
G STAT4 signal transducer and activator of transcription 4 located_in
part_of		 IPI
IBA
NAS		 (PMID:18591661)
(PMID:24058793)		 ComplexPortal
GO_Central		 PMID:18591661 PMID:24058793 GO_REF:0000033 NCBI chr 2:191,029,576...191,151,596
Ensembl chr 2:191,029,576...191,151,596 		JBrowse link
G STAT5A signal transducer and activator of transcription 5A located_in
part_of		 NAS
IBA		 (PMID:24058793) ComplexPortal
GO_Central		 PMID:24058793 GO_REF:0000033 NCBI chr17:42,287,439...42,311,943
Ensembl chr17:42,287,547...42,311,943 		JBrowse link
G STAT5B signal transducer and activator of transcription 5B located_in
part_of		 NAS
IBA		 (PMID:24058793) ComplexPortal
GO_Central		 PMID:24058793 GO_REF:0000033 NCBI chr17:42,199,177...42,288,370
Ensembl chr17:42,199,176...42,288,633 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 located_in
part_of		 IPI
IBA
NAS		 (PMID:22000020)
(PMID:24058793)		 ComplexPortal
GO_Central		 PMID:22000020 PMID:24058793 GO_REF:0000033 NCBI chr12:57,095,408...57,111,362
Ensembl chr12:57,095,408...57,132,139 		JBrowse link
G TCF12 transcription factor 12 part_of IDA (PMID:11802795) BHF-UCL PMID:11802795 NCBI chr15:56,918,090...57,291,310
Ensembl chr15:56,918,623...57,299,281 		JBrowse link
G TCF15 transcription factor 15 part_of IEA Ensembl GO_REF:0000107 NCBI chr20:604,257...610,309
Ensembl chr20:604,257...610,309 		JBrowse link
G TCF3 transcription factor 3 part_of IDA (PMID:10545951), (PMID:11802795) BHF-UCL PMID:10545951 PMID:11802795 NCBI chr19:1,609,292...1,652,615
Ensembl chr19:1,609,291...1,652,615 		JBrowse link
G TFDP1 transcription factor Dp-1 part_of
located_in		 IDA
ISS
IPI		 (PMID:7739537)
(PMID:16360038)		 NTNU_SB
ComplexPortal		 PMID:7739537 PMID:16360038 GO_REF:0000114 NCBI chr13:113,584,688...113,641,473
Ensembl chr13:113,584,721...113,641,473 		JBrowse link
G TFDP2 transcription factor Dp-2 part_of IDA (PMID:7739537), (PMID:9501179) NTNU_SB PMID:7739537 PMID:9501179 NCBI chr 3:141,944,428...142,149,544
Ensembl chr 3:141,944,428...142,149,544 		JBrowse link
G THRA thyroid hormone receptor alpha located_in
part_of		 EXP
IBA		 (PMID:22474364) ComplexPortal
GO_Central		 PMID:22474364 GO_REF:0000033 NCBI chr17:40,062,193...40,093,867
Ensembl chr17:40,058,290...40,093,867 		JBrowse link
G THRB thyroid hormone receptor beta located_in
part_of		 IDA
IBA		 (PMID:26289479) ComplexPortal
GO_Central		 PMID:26289479 GO_REF:0000033 NCBI chr 3:24,117,153...24,495,708
Ensembl chr 3:24,117,153...24,495,756 		JBrowse link
G TP53 tumor protein p53 part_of ISO PMID:10329733 ARUK-UCL PMID:10329733 RGD:14697712 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G TRIM28 tripartite motif containing 28 part_of IEA
IBA
ISS		 Ensembl
GO_Central
BHF-UCL		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:58,544,064...58,550,715
Ensembl chr19:58,544,064...58,550,722 		JBrowse link
G VDR vitamin D receptor located_in
part_of		 IPI
ISS
IDA		 (PMID:22179700)
(PMID:17426122)		 ComplexPortal
BHF-UCL		 PMID:17426122 PMID:22179700 GO_REF:0000114 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048 		JBrowse link
G WWOX WW domain containing oxidoreductase part_of ISS
IEA		 (PMID:19366691) BHF-UCL
Ensembl		 PMID:19366691 GO_REF:0000107 NCBI chr16:78,099,654...79,212,667
Ensembl chr16:78,099,400...79,212,667 		JBrowse link
G XBP1 X-box binding protein 1 located_in IPI (PMID:23661758) ComplexPortal PMID:23661758 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597 		JBrowse link
activating signal cointegrator 1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCC2 activating signal cointegrator 1 complex subunit 2 part_of IDA (PMID:12077347) UniProt PMID:12077347 NCBI chr22:29,788,611...29,838,274
Ensembl chr22:29,788,609...29,838,304 		JBrowse link
G ASCC3 activating signal cointegrator 1 complex subunit 3 part_of IDA (PMID:12077347) UniProt PMID:12077347 NCBI chr 6:100,508,194...100,881,329
Ensembl chr 6:100,508,194...100,881,372 		JBrowse link
G TRIP4 thyroid hormone receptor interactor 4 part_of IDA (PMID:12077347) UniProt PMID:12077347 NCBI chr15:64,387,836...64,455,303
Ensembl chr15:64,387,748...64,455,303 		JBrowse link
activin responsive factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXH1 forkhead box H1 part_of IDA
IEA
IBA		 (PMID:9389648) BHF-UCL
TreeGrafter
GO_Central
Ensembl		 PMID:9389648 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:144,473,412...144,475,849
Ensembl chr 8:144,473,412...144,475,849 		JBrowse link
G SMAD2 SMAD family member 2 part_of IDA (PMID:9389648) BHF-UCL PMID:9389648 NCBI chr18:47,808,957...47,930,872
Ensembl chr18:47,808,957...47,931,146 		JBrowse link
G SMAD4 SMAD family member 4 part_of IDA (PMID:9389648) BHF-UCL PMID:9389648 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,528...51,085,045 		JBrowse link
ATF1-ATF4 transcription factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF1 activating transcription factor 1 part_of IEA
IDA		 (PMID:12871976) Ensembl
ParkinsonsUK-UCL		 PMID:12871976 GO_REF:0000107 NCBI chr12:50,763,459...50,821,162
Ensembl chr12:50,763,710...50,821,162 		JBrowse link
G ATF4 activating transcription factor 4 part_of IEA
IBA
IDA		 (PMID:12871976) Ensembl
GO_Central
TreeGrafter
ParkinsonsUK-UCL		 PMID:12871976 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683 		JBrowse link
ATF4-CREB1 transcription factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF1 activating transcription factor 1 part_of IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:50,763,459...50,821,162
Ensembl chr12:50,763,710...50,821,162 		JBrowse link
G ATF4 activating transcription factor 4 part_of IEA
IBA
IDA		 (PMID:12871976) Ensembl
GO_Central
TreeGrafter
ParkinsonsUK-UCL		 PMID:12871976 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 part_of IEA
IBA
IDA		 (PMID:12871976) Ensembl
TreeGrafter
GO_Central
ParkinsonsUK-UCL		 PMID:12871976 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:207,529,962...207,605,988
Ensembl chr 2:207,529,737...207,605,988 		JBrowse link
G CREM cAMP responsive element modulator part_of IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:35,126,846...35,212,958
Ensembl chr10:35,126,791...35,212,958 		JBrowse link
beta-catenin-TCF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL9 BCL9 transcription coactivator part_of IPI
IEA
IBA
IDA		 (PMID:11955446)
(PMID:28296634)		 FlyBase
TreeGrafter
GO_Central		 PMID:11955446 PMID:28296634 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:147,541,501...147,626,216
Ensembl chr 1:147,541,501...147,626,216 		JBrowse link
G BCL9L BCL9 like part_of IDA
IBA		 (PMID:28296634) FlyBase
GO_Central		 PMID:28296634 GO_REF:0000033 NCBI chr11:118,896,136...118,925,926
Ensembl chr11:118,893,875...118,925,926 		JBrowse link
G CTNNB1 catenin beta 1 part_of
located_in		 IPI
IEA
IDA		 (PMID:18936100)
(PMID:20123964)
(PMID:11955446)
(PMID:28296634)		 ParkinsonsUK-UCL
Ensembl
ComplexPortal
FlyBase		 PMID:11955446 PMID:18936100 PMID:20123964 PMID:28296634 GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G LDB1 LIM domain binding 1 part_of IDA (PMID:28296634) FlyBase PMID:28296634 NCBI chr10:102,102,088...102,121,442
Ensembl chr10:102,106,489...102,120,368 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 part_of
located_in		 IPI
IEA
IBA		 (PMID:18936100)
(PMID:20123964)		 ParkinsonsUK-UCL
TreeGrafter
GO_Central
Ensembl
ComplexPortal		 PMID:18936100 PMID:20123964 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956 		JBrowse link
G PYGO2 pygopus family PHD finger 2 part_of IDA (PMID:28296634) FlyBase PMID:28296634 NCBI chr 1:154,957,026...154,961,782
Ensembl chr 1:154,957,026...154,963,853 		JBrowse link
G TCF4 transcription factor 4 part_of IPI (PMID:11955446) FlyBase PMID:11955446 NCBI chr18:55,222,185...55,635,957
Ensembl chr18:55,222,185...55,664,787 		JBrowse link
G TCF7 transcription factor 7 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:134,108,218...134,148,210
Ensembl chr 5:134,114,681...134,151,865 		JBrowse link
G TCF7L1 transcription factor 7 like 1 part_of IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:85,133,392...85,310,387
Ensembl chr 2:85,133,392...85,310,387 		JBrowse link
G TCF7L2 transcription factor 7 like 2 part_of IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:112,950,247...113,167,678
Ensembl chr10:112,950,247...113,167,678 		JBrowse link
G TLE1 TLE family member 1, transcriptional corepressor part_of IDA (PMID:28296634) FlyBase PMID:28296634 NCBI chr 9:81,583,683...81,689,547
Ensembl chr 9:81,583,683...81,689,547 		JBrowse link
G TLE3 TLE family member 3, transcriptional corepressor part_of IDA (PMID:28296634) FlyBase PMID:28296634 NCBI chr15:70,047,790...70,097,917
Ensembl chr15:70,047,790...70,098,176 		JBrowse link
G TLE4 TLE family member 4, transcriptional corepressor part_of IDA (PMID:28296634) FlyBase PMID:28296634 NCBI chr 9:79,571,965...79,726,882
Ensembl chr 9:79,571,773...79,726,882 		JBrowse link
beta-catenin-TCF7L2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 part_of IDA (PMID:12651860), (PMID:9065401), (PMID:9065402) BHF-UCL PMID:9065401 PMID:9065402 PMID:12651860 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G TCF4 transcription factor 4 part_of IDA (PMID:12651860) UniProt PMID:12651860 NCBI chr18:55,222,185...55,635,957
Ensembl chr18:55,222,185...55,664,787 		JBrowse link
G TCF7L2 transcription factor 7 like 2 part_of IDA (PMID:9065401), (PMID:9065402) BHF-UCL PMID:9065401 PMID:9065402 NCBI chr10:112,950,247...113,167,678
Ensembl chr10:112,950,247...113,167,678 		JBrowse link
C/EBP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEBPA CCAAT enhancer binding protein alpha located_in IPI (PMID:20102225) ComplexPortal PMID:20102225 NCBI chr19:33,299,934...33,302,534
Ensembl chr19:33,299,934...33,302,534 		JBrowse link
G CEBPB CCAAT enhancer binding protein beta part_of
located_in		 IEA
IPI		 (PMID:20102225) Ensembl
ComplexPortal		 PMID:20102225 GO_REF:0000107 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,830...50,192,668 		JBrowse link
CCAAT-binding factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 part_of ISO PMID:8703044 MGI PMID:8703044 RGD:150521642 NCBI chr 2:175,072,259...175,168,203
Ensembl chr 2:175,072,250...175,168,382 		JBrowse link
G CEBPZ CCAAT enhancer binding protein zeta part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:37,201,612...37,231,596
Ensembl chr 2:37,201,612...37,231,596 		JBrowse link
G ING2 inhibitor of growth family member 2 part_of IDA (PMID:15243141) UniProt PMID:15243141 NCBI chr 4:183,505,058...183,512,429
Ensembl chr 4:183,505,058...183,512,429 		JBrowse link
G NFYA nuclear transcription factor Y subunit alpha part_of
located_in		 ISO
IEA
IBA
IDA
IPI		 (PMID:15243141)
(PMID:23332751)		 RGD
TreeGrafter
GO_Central
UniProt
InterPro
ComplexPortal		 PMID:7878029 PMID:15243141 PMID:23332751 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 RGD:729287 NCBI chr 6:41,072,974...41,102,403
Ensembl chr 6:41,072,974...41,102,403 		JBrowse link
G NFYB nuclear transcription factor Y subunit beta part_of
located_in		 ISO
IBA
IEA
IPI
IDA		 (PMID:23332751)
(PMID:15243141)		 RGD
GO_Central
InterPro
ComplexPortal
UniProt		 PMID:7878029 PMID:15243141 PMID:23332751 GO_REF:0000002 GO_REF:0000033 RGD:729287 NCBI chr12:104,117,086...104,138,210
Ensembl chr12:104,117,086...104,138,241 		JBrowse link
G NFYC nuclear transcription factor Y subunit gamma part_of
located_in		 ISO
IBA
IEA
IDA
IPI		 (PMID:15243141)
(PMID:23332751)		 RGD
GO_Central
Ensembl
UniProt
ComplexPortal		 PMID:7878029 PMID:15243141 PMID:23332751 GO_REF:0000033 GO_REF:0000107 RGD:729287 NCBI chr 1:40,691,704...40,771,603
Ensembl chr 1:40,691,648...40,771,603 		JBrowse link
CHOP-ATF4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF4 activating transcription factor 4 part_of IDA
IPI
NAS		 (PMID:11478948)
(PMID:18940792)
(PMID:15775988)		 ParkinsonsUK-UCL PMID:11478948 PMID:15775988 PMID:18940792 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 part_of IDA
IBA
IEA
IPI		 (PMID:11478948)
(PMID:18940792)		 ParkinsonsUK-UCL
GO_Central
TreeGrafter		 PMID:11478948 PMID:18940792 GO_REF:0000033 GO_REF:0000118 NCBI chr12:57,516,588...57,520,517
Ensembl chr12:57,516,588...57,521,737 		JBrowse link
CHOP-C/EBP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEBPA CCAAT enhancer binding protein alpha part_of
located_in		 ISO
IPI		 PMID:8657121
(PMID:20102225)		 ParkinsonsUK-UCL
ComplexPortal		 PMID:8657121 PMID:20102225 RGD:1599740 NCBI chr19:33,299,934...33,302,534
Ensembl chr19:33,299,934...33,302,534 		JBrowse link
G CEBPB CCAAT enhancer binding protein beta located_in
part_of		 IPI
NAS		 (PMID:20102225)
(PMID:15775988)		 ComplexPortal
ParkinsonsUK-UCL		 PMID:15775988 PMID:20102225 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,830...50,192,668 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 part_of
located_in		 ISS
IEA
IBA
TAS
IPI		 (PMID:14685163)
(PMID:20102225)		 ParkinsonsUK-UCL
TreeGrafter
GO_Central
Ensembl
ComplexPortal		 PMID:14685163 PMID:20102225 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:57,516,588...57,520,517
Ensembl chr12:57,516,588...57,521,737 		JBrowse link
CLOCK-BMAL transcription complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMAL1 basic helix-loop-helix ARNT like 1 located_in
part_of		 IPI
ISO		 (PMID:23229515)
(MGI:5442460|PMID:22653727)		 ComplexPortal
ComplexPortal		 PMID:22653727 PMID:23229515 MGI:5442460 NCBI chr11:13,276,652...13,387,266
Ensembl chr11:13,276,652...13,387,266 		JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 part_of
located_in		 IEA
IPI		 (PMID:10864977) Ensembl
ComplexPortal		 PMID:10864977 GO_REF:0000107 NCBI chr12:27,332,836...27,425,286
Ensembl chr12:27,332,836...27,425,289 		JBrowse link
G CLOCK clock circadian regulator part_of
located_in		 IEA
IBA
IPI		 (PMID:10864977), (PMID:23229515) Ensembl
GO_Central
TreeGrafter
ComplexPortal		 PMID:10864977 PMID:23229515 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 part_of IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829 		JBrowse link
G PASD1 PAS domain containing repressor 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr  X:151,563,675...151,676,739
Ensembl chr  X:151,563,675...151,676,739 		JBrowse link
core mediator complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MED1 mediator complex subunit 1 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272 		JBrowse link
G MED10 mediator complex subunit 10 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr 5:6,371,874...6,378,547
Ensembl chr 5:6,371,874...6,378,571 		JBrowse link
G MED11 mediator complex subunit 11 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr17:4,731,428...4,733,607
Ensembl chr17:4,731,428...4,733,608 		JBrowse link
G MED14 mediator complex subunit 14 located_in
part_of		 IPI
IEA
IBA		 (PMID:24882805) ComplexPortal
TreeGrafter
GO_Central		 PMID:24882805 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:40,648,305...40,736,159
Ensembl chr  X:40,648,305...40,735,858 		JBrowse link
G MED15 mediator complex subunit 15 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr22:20,507,610...20,587,619
Ensembl chr22:20,495,913...20,587,632 		JBrowse link
G MED16 mediator complex subunit 16 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr19:867,963...893,187
Ensembl chr19:867,630...893,218 		JBrowse link
G MED17 mediator complex subunit 17 located_in
part_of		 IPI
IBA
IEA		 (PMID:24882805) ComplexPortal
GO_Central
TreeGrafter		 PMID:24882805 GO_REF:0000033 GO_REF:0000118 NCBI chr11:93,784,282...93,814,963
Ensembl chr11:93,784,227...93,814,963 		JBrowse link
G MED18 mediator complex subunit 18 located_in
part_of		 IPI
IBA
IEA		 (PMID:24882805) ComplexPortal
GO_Central
TreeGrafter		 PMID:24882805 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:28,329,040...28,335,965
Ensembl chr 1:28,329,002...28,335,965 		JBrowse link
G MED19 mediator complex subunit 19 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr11:57,703,709...57,712,215
Ensembl chr11:57,703,710...57,712,221 		JBrowse link
G MED20 mediator complex subunit 20 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr 6:41,905,354...41,921,139
Ensembl chr 6:41,905,354...41,921,139 		JBrowse link
G MED21 mediator complex subunit 21 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr12:27,022,558...27,038,951
Ensembl chr12:27,022,546...27,066,343 		JBrowse link
G MED22 mediator complex subunit 22 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr 9:133,338,312...133,348,131
Ensembl chr 9:133,338,312...133,348,131 		JBrowse link
G MED23 mediator complex subunit 23 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr 6:131,573,966...131,628,313
Ensembl chr 6:131,573,966...131,628,242 		JBrowse link
G MED24 mediator complex subunit 24 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr17:40,019,104...40,054,408
Ensembl chr17:40,019,097...40,061,215 		JBrowse link
G MED25 mediator complex subunit 25 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr19:49,818,289...49,840,384
Ensembl chr19:49,818,282...49,840,383 		JBrowse link
G MED26 mediator complex subunit 26 located_in
part_of		 IPI
IBA
IEA		 (PMID:24882805) ComplexPortal
GO_Central
TreeGrafter		 PMID:24882805 GO_REF:0000033 GO_REF:0000118 NCBI chr19:16,574,919...16,628,204
Ensembl chr19:16,574,907...16,629,062 		JBrowse link
G MED27 mediator complex subunit 27 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr 9:131,860,112...132,079,867
Ensembl chr 9:131,852,928...132,079,867 		JBrowse link
G MED28 mediator complex subunit 28 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr 4:17,614,641...17,634,105
Ensembl chr 4:17,614,641...17,634,105 		JBrowse link
G MED29 mediator complex subunit 29 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr19:39,391,378...39,400,641
Ensembl chr19:39,391,303...39,400,641 		JBrowse link
G MED30 mediator complex subunit 30 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr 8:117,520,713...117,540,262
Ensembl chr 8:117,520,713...117,540,262 		JBrowse link
G MED31 mediator complex subunit 31 located_in
part_of		 IPI
IBA		 (PMID:24882805) ComplexPortal
GO_Central		 PMID:24882805 GO_REF:0000033 NCBI chr17:6,643,311...6,651,605
Ensembl chr17:6,643,311...6,651,634 		JBrowse link
G MED4 mediator complex subunit 4 located_in
part_of		 IPI
IEA
IBA		 (PMID:24882805) ComplexPortal
TreeGrafter
GO_Central		 PMID:24882805 GO_REF:0000033 GO_REF:0000118 NCBI chr13:48,075,724...48,095,104
Ensembl chr13:48,053,323...48,095,131 		JBrowse link
G MED6 mediator complex subunit 6 located_in
part_of		 IPI
IBA
IEA		 (PMID:24882805) ComplexPortal
GO_Central
TreeGrafter		 PMID:24882805 GO_REF:0000033 GO_REF:0000118 NCBI chr14:70,583,221...70,600,655
Ensembl chr14:70,581,257...70,600,690 		JBrowse link
G MED7 mediator complex subunit 7 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr 5:157,137,424...157,142,865
Ensembl chr 5:157,137,424...157,159,019 		JBrowse link
G MED8 mediator complex subunit 8 located_in
part_of		 IPI
IBA		 (PMID:24882805) ComplexPortal
GO_Central		 PMID:24882805 GO_REF:0000033 NCBI chr 1:43,383,917...43,389,800
Ensembl chr 1:43,383,917...43,389,808 		JBrowse link
G MED9 mediator complex subunit 9 located_in IPI (PMID:24882805) ComplexPortal PMID:24882805 NCBI chr17:17,477,000...17,493,221
Ensembl chr17:17,476,994...17,493,221 		JBrowse link
core TFIIH complex portion of holo TFIIH complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GTF2H2 general transcription factor IIH subunit 2 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 5:71,035,347...71,067,676
Ensembl chr 5:71,035,016...71,067,689 		JBrowse link
G GTF2H2C GTF2H2 family member C part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221 		JBrowse link
G GTF2H3 general transcription factor IIH subunit 3 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr12:123,633,829...123,662,604
Ensembl chr12:123,633,739...123,662,604 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 6:30,908,207...30,914,106
Ensembl chr 6:30,908,207...30,914,106 		JBrowse link
core-binding factor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFB core-binding factor subunit beta part_of TAS
IBA
IEA		 (PMID:18258917) UniProt
GO_Central
TreeGrafter		 PMID:18258917 GO_REF:0000033 GO_REF:0000118 NCBI chr16:67,029,149...67,101,058
Ensembl chr16:67,028,984...67,101,058 		JBrowse link
G RUNX1 RUNX family transcription factor 1 part_of TAS (PMID:18258917) UniProt PMID:18258917 NCBI chr21:34,787,801...35,049,302
Ensembl chr21:34,787,801...36,004,667 		JBrowse link
G RUNX3 RUNX family transcription factor 3 part_of TAS (PMID:18258917) UniProt PMID:18258917 NCBI chr 1:24,899,511...24,965,138
Ensembl chr 1:24,899,511...24,965,121 		JBrowse link
heteromeric SMAD protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMAD1 SMAD family member 1 located_in
part_of		 IPI
IBA		 (PMID:11779505) ComplexPortal
GO_Central		 PMID:11779505 GO_REF:0000033 NCBI chr 4:145,480,770...145,559,176
Ensembl chr 4:145,481,194...145,559,176 		JBrowse link
G SMAD2 SMAD family member 2 part_of
located_in		 IDA
IBA
IEA
NAS
IPI		 (PMID:21828274)
(PMID:16322555)
(PMID:15350224)		 BHF-UCL
GO_Central
TreeGrafter
ComplexPortal		 PMID:15350224 PMID:16322555 PMID:21828274 GO_REF:0000033 GO_REF:0000118 NCBI chr18:47,808,957...47,930,872
Ensembl chr18:47,808,957...47,931,146 		JBrowse link
G SMAD3 SMAD family member 3 part_of
located_in		 IDA
IEA
IBA
NAS		 (PMID:21828274)
(PMID:16322555)		 BHF-UCL
TreeGrafter
GO_Central
ComplexPortal		 PMID:16322555 PMID:21828274 GO_REF:0000033 GO_REF:0000118 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173 		JBrowse link
G SMAD4 SMAD family member 4 located_in
part_of		 IPI
IBA
IEA
NAS		 (PMID:11779505), (PMID:15350224)
(PMID:16322555)		 ComplexPortal
GO_Central
TreeGrafter		 PMID:11779505 PMID:15350224 PMID:16322555 GO_REF:0000033 GO_REF:0000118 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,528...51,085,045 		JBrowse link
G SMAD5 SMAD family member 5 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:136,132,845...136,182,733
Ensembl chr 5:136,132,845...136,188,747 		JBrowse link
G SMAD6 SMAD family member 6 part_of IBA GO_Central GO_REF:0000033 NCBI chr15:66,702,236...66,782,849
Ensembl chr15:66,702,236...66,782,849 		JBrowse link
G SMAD7 SMAD family member 7 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr18:48,919,853...48,950,965
Ensembl chr18:48,919,853...48,950,965 		JBrowse link
G SMAD9 SMAD family member 9 part_of IBA GO_Central GO_REF:0000033 NCBI chr13:36,844,831...36,920,854
Ensembl chr13:36,844,831...36,920,887 		JBrowse link
ISGF3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRF9 interferon regulatory factor 9 located_in IPI (PMID:24065129) ComplexPortal PMID:24065129 NCBI chr14:24,161,265...24,166,565
Ensembl chr14:24,161,234...24,168,043 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 located_in
part_of		 IPI
IBA		 (PMID:24065129) ComplexPortal
GO_Central		 PMID:24065129 GO_REF:0000033 NCBI chr 2:190,969,149...191,014,171
Ensembl chr 2:190,908,460...191,020,960 		JBrowse link
G STAT2 signal transducer and activator of transcription 2 located_in
part_of		 IPI
IBA		 (PMID:24065129) ComplexPortal
GO_Central		 PMID:24065129 GO_REF:0000033 NCBI chr12:56,341,597...56,360,107
Ensembl chr12:56,341,597...56,360,203 		JBrowse link
Myc-Max complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAX MYC associated factor X located_in
part_of		 IPI
IEA		 (PMID:12553908) ComplexPortal
Ensembl		 PMID:12553908 GO_REF:0000107 NCBI chr14:65,006,101...65,102,695
Ensembl chr14:65,006,174...65,102,695 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor located_in
part_of		 IPI
ISO		 (PMID:12553908)
(MGI:4839428|PMID:20434984)		 ComplexPortal
ComplexPortal		 PMID:12553908 PMID:20434984 MGI:4839428 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951 		JBrowse link
Nkx-2.5 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-5 NK2 homeobox 5 located_in IPI (PMID:22849347) ComplexPortal PMID:22849347 NCBI chr 5:173,232,109...173,235,206
Ensembl chr 5:173,232,109...173,235,311 		JBrowse link
Rb-E2F complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEBPA CCAAT enhancer binding protein alpha ISO RGD PMID:16172914 RGD:1625368 NCBI chr19:33,299,934...33,302,534
Ensembl chr19:33,299,934...33,302,534 		JBrowse link
G E2F1 E2F transcription factor 1 located_in
part_of		 IPI
IBA
IDA		 (PMID:16360038)
(PMID:20224733)		 ComplexPortal
GO_Central
BHF-UCL		 PMID:16360038 PMID:20224733 GO_REF:0000033 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385 		JBrowse link
G E2F2 E2F transcription factor 2 located_in ISS ComplexPortal GO_REF:0000114 NCBI chr 1:23,505,212...23,531,233
Ensembl chr 1:23,506,438...23,531,233 		JBrowse link
G RB1 RB transcriptional corepressor 1 part_of
located_in		 TAS
IBA
IEA
ISS
IPI
IDA		 (PMID:19149898)
(PMID:16360038)
(PMID:8245034)		 BHF-UCL
GO_Central
TreeGrafter
ComplexPortal
Ensembl
CAFA		 PMID:8245034 PMID:16360038 PMID:19149898 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114 GO_REF:0000118 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436 		JBrowse link
G TFDP1 transcription factor Dp-1 located_in IPI
ISS		 (PMID:16360038) ComplexPortal PMID:16360038 GO_REF:0000114 NCBI chr13:113,584,688...113,641,473
Ensembl chr13:113,584,721...113,641,473 		JBrowse link
SMN-Gemin2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GEMIN5 gem nuclear organelle associated protein 5 part_of IDA (PMID:19377484) UniProt PMID:19377484 NCBI chr 5:154,887,411...154,938,211
Ensembl chr 5:154,887,411...154,938,211 		JBrowse link
TEAD-YAP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TEAD1 TEA domain transcription factor 1 located_in
part_of		 IPI
IDA		 (PMID:25384421)
(PMID:20123905)		 ComplexPortal
CAFA		 PMID:20123905 PMID:25384421 NCBI chr11:12,674,421...12,944,737
Ensembl chr11:12,674,421...12,944,737 		JBrowse link
G TEAD2 TEA domain transcription factor 2 part_of IDA (PMID:20368466) CAFA PMID:20368466 NCBI chr19:49,340,595...49,362,416
Ensembl chr19:49,340,595...49,362,457 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator part_of
located_in		 IEA
IPI
IDA		 (PMID:25384421)
(PMID:20123905), (PMID:20368466)		 Ensembl
ComplexPortal
CAFA		 PMID:20123905 PMID:20368466 PMID:25384421 GO_REF:0000107 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424 		JBrowse link
transcription factor AP-1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOS Fos proto-oncogene, AP-1 transcription factor subunit part_of
located_in		 IMP
IDA
IPI
IEA		 (PMID:26514923)
(PMID:10508860)
(PMID:7816143), (PMID:9510247)		 CAFA
ComplexPortal
Ensembl		 PMID:7816143 PMID:9510247 PMID:10508860 PMID:26514923 GO_REF:0000107 NCBI chr14:75,278,828...75,282,230
Ensembl chr14:75,278,826...75,282,230 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit part_of
located_in		 IMP
IDA
IPI		 (PMID:26514923)
(PMID:10508860)
(PMID:7816143), (PMID:8662824), (PMID:9510247)		 CAFA
ComplexPortal		 PMID:7816143 PMID:8662824 PMID:9510247 PMID:10508860 PMID:26514923 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048 		JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit part_of IDA (PMID:10508860) CAFA PMID:10508860 NCBI chr19:12,791,486...12,793,315
Ensembl chr19:12,791,486...12,793,315 		JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit part_of IDA (PMID:10508860) CAFA PMID:10508860 NCBI chr19:18,279,694...18,281,622
Ensembl chr19:18,279,694...18,281,622 		JBrowse link
G NFATC2 nuclear factor of activated T cells 2 located_in IPI (PMID:9510247) ComplexPortal PMID:9510247 NCBI chr20:51,386,963...51,562,839
Ensembl chr20:51,386,957...51,562,831 		JBrowse link
transcription factor TFIIA complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GTF2A1 general transcription factor IIA subunit 1 located_in
part_of		 IPI
IBA
IEA
IDA		 (PMID:8626665)
(PMID:7724559)		 ComplexPortal
GO_Central
InterPro
BHF-UCL
Ensembl		 PMID:7724559 PMID:8626665 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr14:81,175,452...81,221,390
Ensembl chr14:81,175,452...81,221,377 		JBrowse link
G GTF2A1L general transcription factor IIA subunit 1 like part_of IEA
IBA		 InterPro
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:48,617,856...48,679,604
Ensembl chr 2:48,617,798...48,733,148 		JBrowse link
G GTF2A2 general transcription factor IIA subunit 2 part_of
located_in		 IEA
IBA
IDA
IPI		 (PMID:7724559), (PMID:7958899), (PMID:7958900)
(PMID:8626665)		 InterPro
TreeGrafter
GO_Central
BHF-UCL
ComplexPortal		 PMID:7724559 PMID:7958899 PMID:7958900 PMID:8626665 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr15:59,638,062...59,657,515
Ensembl chr15:59,638,062...59,657,541 		JBrowse link
G STON1-GTF2A1L STON1-GTF2A1L readthrough part_of IEA InterPro GO_REF:0000002 NCBI chr 2:48,529,925...48,776,519
Ensembl chr 2:48,529,925...48,776,517 		JBrowse link
G TBP TATA-box binding protein part_of IDA (PMID:7724559) BHF-UCL PMID:7724559 NCBI chr 6:170,554,369...170,572,859
Ensembl chr 6:170,554,302...170,572,870 		JBrowse link
G TBPL1 TATA-box binding protein like 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:133,952,174...133,990,432
Ensembl chr 6:133,952,170...133,990,432 		JBrowse link
transcription factor TFIID complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166 		JBrowse link
G GTF2A1 general transcription factor IIA subunit 1 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr14:81,175,452...81,221,390
Ensembl chr14:81,175,452...81,221,377 		JBrowse link
G GTF2A2 general transcription factor IIA subunit 2 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr15:59,638,062...59,657,515
Ensembl chr15:59,638,062...59,657,541 		JBrowse link
G GTF2B general transcription factor IIB part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 1:88,852,633...88,891,567
Ensembl chr 1:88,852,633...88,891,944 		JBrowse link
G GTF2E1 general transcription factor IIE subunit 1 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 3:120,742,744...120,783,069
Ensembl chr 3:120,742,637...120,783,069 		JBrowse link
G GTF2E2 general transcription factor IIE subunit 2 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 8:30,578,318...30,658,236
Ensembl chr 8:30,578,318...30,658,236 		JBrowse link
G GTF2F1 general transcription factor IIF subunit 1 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr19:6,379,572...6,393,164
Ensembl chr19:6,379,572...6,393,981 		JBrowse link
G GTF2H2 general transcription factor IIH subunit 2 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 5:71,035,347...71,067,676
Ensembl chr 5:71,035,016...71,067,689 		JBrowse link
G GTF2H2C GTF2H2 family member C part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221 		JBrowse link
G GTF2H3 general transcription factor IIH subunit 3 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr12:123,633,829...123,662,604
Ensembl chr12:123,633,739...123,662,604 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 6:30,908,207...30,914,106
Ensembl chr 6:30,908,207...30,914,106 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 6:158,168,350...158,199,344
Ensembl chr 6:158,168,350...158,199,344 		JBrowse link
G LINC02218 long intergenic non-protein coding RNA 2218 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,444,010...17,483,946
Ensembl chr 5:17,444,010...17,487,371 		JBrowse link
G LOC124906475 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906476 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906477 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906478 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906479 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906480 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906481 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906482 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906483 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906484 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906485 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906486 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906487 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906488 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906489 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906490 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC124906491 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC128966665 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC128966671 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC128966672 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC128966673 putative TAF11-like protein ENSP00000332601 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC130160542 putative TAF11-like protein ENSP05220060156 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC130160543 putative TAF11-like protein ENSP05220103540 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC130160544 putative TAF11-like protein ENSP05220103539 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC130160545 putative TAF11-like protein ENSP05220103537 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC130160546 putative TAF11-like protein ENSP05220103536 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC130160547 putative TAF11-like protein ENSP05220103535 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC130160548 putative TAF11-like protein ENSP05220103534 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC130160549 putative TAF11-like protein ENSP05220103533 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G PAAF1 proteasomal ATPase associated factor 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr11:73,876,699...73,931,114
Ensembl chr11:73,876,699...73,931,114 		JBrowse link
G SUPT3H SPT3 homolog, SAGA and STAGA complex component part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 6:44,809,057...45,377,934
Ensembl chr 6:44,809,317...45,377,953 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 part_of
located_in		 TAS
IBA
ISS
IEA
IPI
IDA		 (PMID:12498690)
(PMID:23332750)
(PMID:14580349), (PMID:24927529), (PMID:25412659), (PMID:27007846), (PMID:29111974), (PMID:8625415)		 ParkinsonsUK-UCL
GO_Central
ComplexPortal
InterPro
UniProt
BHF-UCL		 PMID:8625415 PMID:12498690 PMID:14580349 PMID:23332750 PMID:24927529 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000114 NCBI chr  X:71,366,357...71,530,525
Ensembl chr  X:71,366,222...71,532,374 		JBrowse link
G TAF10 TATA-box binding protein associated factor 10 located_in
part_of		 IPI
IBA
ISS
IDA		 (PMID:23332750)
(PMID:14580349), (PMID:15099517), (PMID:29111974), (PMID:7729427), (PMID:7923369)		 ComplexPortal
GO_Central
ARUK-UCL		 PMID:7729427 PMID:7923369 PMID:14580349 PMID:15099517 PMID:23332750 More... GO_REF:0000033 GO_REF:0000114 NCBI chr11:6,606,294...6,612,216
Ensembl chr11:6,606,294...6,612,539 		JBrowse link
G TAF11 TATA-box binding protein associated factor 11 located_in
part_of		 IPI
IBA
ISS
IDA
IEA		 (PMID:23332750)
(PMID:14580349), (PMID:29111974), (PMID:7729427), (PMID:8670810)		 ComplexPortal
GO_Central
UniProt
InterPro		 PMID:7729427 PMID:8670810 PMID:14580349 PMID:23332750 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000114 NCBI chr 6:34,877,462...34,888,071
Ensembl chr 6:34,877,462...34,889,192 		JBrowse link
G TAF11L10 TATA-box binding protein associated factor 11 like 10 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,597,232...17,597,828
Ensembl chr 5:17,597,232...17,597,828 		JBrowse link
G TAF11L11 TATA-box binding protein associated factor 11 like 11 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,604,183...17,605,910
Ensembl chr 5:17,604,177...17,605,910 		JBrowse link
G TAF11L12 TATA-box binding protein associated factor 11 like 12 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,610,392...17,612,111
Ensembl chr 5:17,610,496...17,611,583 		JBrowse link
G TAF11L13 TATA-box binding protein associated factor 11 like 13 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,632,088...17,632,684
Ensembl chr 5:17,632,088...17,632,684 		JBrowse link
G TAF11L14 TATA-box binding protein associated factor 11 like 14 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,634,460...17,635,053
Ensembl chr 5:17,634,460...17,635,053 		JBrowse link
G TAF11L2 TATA-box binding protein associated factor 11 like 2 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,498,231...17,498,827
Ensembl chr 5:17,498,231...17,498,827 		JBrowse link
G TAF11L3 TATA-box binding protein associated factor 11 like 3 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,518,367...17,518,963
Ensembl chr 5:17,518,367...17,518,963 		JBrowse link
G TAF11L4 TATA-box binding protein associated factor 11 like 4 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,521,801...17,522,397
Ensembl chr 5:17,521,801...17,522,397 		JBrowse link
G TAF11L5 TATA-box binding protein associated factor 11 like 5 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,525,235...17,525,831
Ensembl chr 5:17,525,235...17,525,831 		JBrowse link
G TAF11L6 TATA-box binding protein associated factor 11 like 6 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,528,669...17,529,265
Ensembl chr 5:17,528,669...17,529,265 		JBrowse link
G TAF11L7 TATA-box binding protein associated factor 11 like 7 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,585,162...17,585,758
Ensembl chr 5:17,585,162...17,585,758 		JBrowse link
G TAF11L8 TATA-box binding protein associated factor 11 like 8 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,590,364...17,590,960
Ensembl chr 5:17,590,364...17,590,960 		JBrowse link
G TAF11L9 TATA-box binding protein associated factor 11 like 9 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:17,593,798...17,594,394
Ensembl chr 5:17,593,798...17,594,394 		JBrowse link
G TAF12 TATA-box binding protein associated factor 12 located_in
part_of		 IPI
IBA
ISS
TAS
IEA
IDA		 (PMID:23332750)
(PMID:7729427)
(PMID:14580349), (PMID:29111974)		 ComplexPortal
GO_Central
PINC
InterPro
MGI		 PMID:7729427 PMID:14580349 PMID:23332750 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000114 NCBI chr 1:28,602,850...28,648,269
Ensembl chr 1:28,587,829...28,648,291 		JBrowse link
G TAF13 TATA-box binding protein associated factor 13 located_in
part_of		 IPI
IBA
IEA
ISS
IDA
NAS		 (PMID:23332750)
(PMID:29111974), (PMID:7729427)
(PMID:9695952)		 ComplexPortal
GO_Central
TreeGrafter
UniProt		 PMID:7729427 PMID:9695952 PMID:23332750 PMID:29111974 GO_REF:0000033 GO_REF:0000114 GO_REF:0000118 NCBI chr 1:109,064,140...109,076,003
Ensembl chr 1:109,062,496...109,076,012 		JBrowse link
G TAF1L TATA-box binding protein associated factor 1 like part_of IEA
IBA		 InterPro
GO_Central
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 9:32,629,454...32,635,669
Ensembl chr 9:32,629,454...32,635,669 		JBrowse link
G TAF2 TATA-box binding protein associated factor 2 part_of
located_in		 IDA
IBA
IEA
ISS
IPI		 (PMID:10409744), (PMID:14580349), (PMID:27007846), (PMID:29111974), (PMID:9774672)
(PMID:23332750)		 MGI
GO_Central
TreeGrafter
ComplexPortal
InterPro		 PMID:9774672 PMID:10409744 PMID:14580349 PMID:23332750 PMID:27007846 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000114 GO_REF:0000118 NCBI chr 8:119,730,774...119,832,841
Ensembl chr 8:119,730,774...119,832,863 		JBrowse link
G TAF3 TATA-box binding protein associated factor 3 part_of
located_in		 IDA
IBA
IEA
ISS
IPI		 (PMID:11438666), (PMID:29111974)
(PMID:23332750)		 MGI
GO_Central
TreeGrafter
ComplexPortal		 PMID:11438666 PMID:23332750 PMID:29111974 GO_REF:0000033 GO_REF:0000114 GO_REF:0000118 NCBI chr10:7,818,505...8,016,631
Ensembl chr10:7,818,497...8,016,631 		JBrowse link
G TAF4 TATA-box binding protein associated factor 4 part_of
located_in		 IDA
IBA
IPI
IEA
TAS		 (PMID:14580349), (PMID:29111974)
(PMID:23332750)
(PMID:9192867)		 MGI
GO_Central
ComplexPortal
InterPro
PINC		 PMID:9192867 PMID:14580349 PMID:23332750 PMID:29111974 GO_REF:0000002 GO_REF:0000033 NCBI chr20:61,974,798...62,065,881
Ensembl chr20:61,953,469...62,065,881 		JBrowse link
G TAF4B TATA-box binding protein associated factor 4b part_of
located_in		 IEA
IBA
ISS
IDA		 (PMID:29111974) InterPro
TreeGrafter
GO_Central
ComplexPortal
ARUK-UCL		 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000114 GO_REF:0000118 NCBI chr18:26,226,445...26,391,685
Ensembl chr18:26,226,445...26,391,685 		JBrowse link
G TAF5 TATA-box binding protein associated factor 5 located_in
part_of		 IPI
IBA
ISS
IDA		 (PMID:23332750)
(PMID:14580349), (PMID:29111974), (PMID:9045704)		 ComplexPortal
GO_Central
ARUK-UCL		 PMID:9045704 PMID:14580349 PMID:23332750 PMID:29111974 GO_REF:0000033 GO_REF:0000114 NCBI chr10:103,367,976...103,389,065
Ensembl chr10:103,367,966...103,389,065 		JBrowse link
G TAF5L TATA-box binding protein associated factor 5 like NOT|part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:229,593,134...229,626,122
Ensembl chr 1:229,593,134...229,626,122 		JBrowse link
G TAF6 TATA-box binding protein associated factor 6 part_of
located_in		 IEA
IBA
ISS
IPI
IDA		 (PMID:23332750)
(PMID:14580349), (PMID:27007846), (PMID:29111974), (PMID:8262073)		 InterPro
GO_Central
TreeGrafter
ComplexPortal
UniProt		 PMID:8262073 PMID:14580349 PMID:23332750 PMID:27007846 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000114 GO_REF:0000118 NCBI chr 7:100,107,070...100,127,171
Ensembl chr 7:100,106,876...100,119,841 		JBrowse link
G TAF6L TATA-box binding protein associated factor 6 like part_of IEA InterPro GO_REF:0000002 NCBI chr11:62,771,396...62,787,342
Ensembl chr11:62,771,357...62,787,342 		JBrowse link
G TAF7 TATA-box binding protein associated factor 7 part_of
located_in		 IEA
IBA
ISS
IPI
IDA		 (PMID:23332750)
(PMID:14580349), (PMID:24927529), (PMID:25412659), (PMID:27007846), (PMID:29111974), (PMID:7824954)		 Ensembl
GO_Central
ComplexPortal
ARUK-UCL
InterPro		 PMID:7824954 PMID:14580349 PMID:23332750 PMID:24927529 PMID:25412659 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114 NCBI chr 5:141,318,490...141,320,784
Ensembl chr 5:141,259,884...141,320,784 		JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:101,268,257...101,293,083
Ensembl chr  X:101,268,253...101,293,057 		JBrowse link
G TAF8 TATA-box binding protein associated factor 8 part_of
located_in		 IEA
IBA
ISS
IPI
IDA		 (PMID:23332750)
(PMID:14580349), (PMID:27007846), (PMID:29111974)		 InterPro
GO_Central
ComplexPortal
ARUK-UCL		 PMID:14580349 PMID:23332750 PMID:27007846 PMID:29111974 GO_REF:0000002 GO_REF:0000033 GO_REF:0000114 NCBI chr 6:42,050,524...42,087,462
Ensembl chr 6:42,050,513...42,087,461 		JBrowse link
G TAF9 TATA-box binding protein associated factor 9 located_in
part_of		 IPI
IBA
ISS
IDA		 (PMID:23332750)
(PMID:14580349), (PMID:15899866), (PMID:29111974)		 ComplexPortal
GO_Central
MGI		 PMID:14580349 PMID:15899866 PMID:23332750 PMID:29111974 GO_REF:0000033 GO_REF:0000114 NCBI chr 5:69,364,743...69,369,824
Ensembl chr 5:69,362,026...69,370,013 		JBrowse link
G TAF9B TATA-box binding protein associated factor 9b part_of IDA
IBA
IEA		 (PMID:15899866), (PMID:29111974) ARUK-UCL
GO_Central
TreeGrafter		 PMID:15899866 PMID:29111974 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:78,129,748...78,139,650
Ensembl chr  X:78,129,748...78,139,650 		JBrowse link
G TBP TATA-box binding protein part_of
located_in		 ISO
IEA
ISS
IPI
IDA
TAS		 (PMID:23332750)
(PMID:14580349), (PMID:27007846), (PMID:27193682), (PMID:29111974), (PMID:7729427)
(PMID:2363050)		 RGD
Ensembl
ComplexPortal
UniProt
PINC		 PMID:2363050 PMID:7729427 PMID:7980586 PMID:14580349 PMID:23332750 More... GO_REF:0000107 GO_REF:0000114 RGD:2306552 NCBI chr 6:170,554,369...170,572,859
Ensembl chr 6:170,554,302...170,572,870 		JBrowse link
G TCEA1 transcription elongation factor A1 part_of IDA (PMID:27193682) UniProt PMID:27193682 NCBI chr 8:53,966,556...54,022,448
Ensembl chr 8:53,966,552...54,022,448 		JBrowse link
G WDR38 WD repeat domain 38 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 9:124,853,460...124,857,878
Ensembl chr 9:124,853,417...124,857,890 		JBrowse link
transcription factor TFIIE complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GTF2E1 general transcription factor IIE subunit 1 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:120,742,744...120,783,069
Ensembl chr 3:120,742,637...120,783,069 		JBrowse link
G GTF2E2 general transcription factor IIE subunit 2 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:30,578,318...30,658,236
Ensembl chr 8:30,578,318...30,658,236 		JBrowse link
transcription factor TFIIF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GTF2F1 general transcription factor IIF subunit 1 located_in
part_of		 IPI
IEA
IBA
TAS		 (PMID:11183778)
(PMID:1734283)		 ComplexPortal
TreeGrafter
GO_Central
PINC		 PMID:1734283 PMID:11183778 GO_REF:0000033 GO_REF:0000118 NCBI chr19:6,379,572...6,393,164
Ensembl chr19:6,379,572...6,393,981 		JBrowse link
G GTF2F2 general transcription factor IIF subunit 2 located_in
part_of		 IPI
IBA
IEA		 (PMID:11183778) ComplexPortal
GO_Central
InterPro		 PMID:11183778 GO_REF:0000002 GO_REF:0000033 NCBI chr13:45,120,510...45,284,893
Ensembl chr13:45,120,510...45,284,893 		JBrowse link
transcription factor TFIIH core complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNH cyclin H part_of IDA (PMID:8692841), (PMID:8692842) UniProt PMID:8692841 PMID:8692842 NCBI chr 5:87,311,471...87,412,930
Ensembl chr 5:87,318,416...87,413,029 		JBrowse link
G CDK7 cyclin dependent kinase 7 part_of IDA (PMID:8692841) UniProt PMID:8692841 NCBI chr 5:69,234,795...69,277,430
Ensembl chr 5:69,234,795...69,277,430 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of ISO
IEA
IDA		 (PMID:8692841), (PMID:8692842) RGD
Ensembl
UniProt		 PMID:8692841 PMID:8692842 PMID:8855220 GO_REF:0000107 RGD:1642642 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of ISO
IEA
IDA		 (PMID:8692841), (PMID:8692842) RGD
Ensembl
UniProt		 PMID:8692841 PMID:8692842 PMID:8855220 GO_REF:0000107 RGD:1642642 NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166 		JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 part_of IEA
IBA
IDA		 (PMID:8692841) InterPro
TreeGrafter
GO_Central
UniProt		 PMID:8692841 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr11:18,322,567...18,367,045
Ensembl chr11:18,322,295...18,367,045 		JBrowse link
G GTF2H2 general transcription factor IIH subunit 2 part_of IDA
IEA		 (PMID:11445587) UniProt
InterPro		 PMID:11445587 GO_REF:0000002 NCBI chr 5:71,035,347...71,067,676
Ensembl chr 5:71,035,016...71,067,689 		JBrowse link
G GTF2H2C GTF2H2 family member C part_of IEA
IDA		 (PMID:11445587) InterPro
UniProt		 PMID:11445587 GO_REF:0000002 NCBI chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221 		JBrowse link
G GTF2H2C_2 GTF2H2 family member C, copy 2 part_of IEA InterPro GO_REF:0000002
G GTF2H3 general transcription factor IIH subunit 3 part_of IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr12:123,633,829...123,662,604
Ensembl chr12:123,633,739...123,662,604 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 part_of IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:30,908,207...30,914,106
Ensembl chr 6:30,908,207...30,914,106 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:158,168,350...158,199,344
Ensembl chr 6:158,168,350...158,199,344 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase part_of IDA (PMID:8692841) UniProt PMID:8692841 NCBI chr14:60,734,761...60,969,965
Ensembl chr14:60,734,742...60,969,965 		JBrowse link
transcription factor TFIIH holo complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNH cyclin H part_of IDA (PMID:9852112) UniProt PMID:9852112 NCBI chr 5:87,311,471...87,412,930
Ensembl chr 5:87,318,416...87,413,029 		JBrowse link
G CDK7 cyclin dependent kinase 7 part_of ISO
IEA
IDA		 (PMID:9852112) RGD
InterPro
UniProt		 PMID:7553866 PMID:9852112 GO_REF:0000002 RGD:9590319 NCBI chr 5:69,234,795...69,277,430
Ensembl chr 5:69,234,795...69,277,430 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit part_of IDA
TAS		 (PMID:9852112)
(PMID:7663514)		 UniProt PMID:7663514 PMID:9852112 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit part_of TAS
IEA
IBA
IDA		 (PMID:7663514)
(PMID:9852112)		 UniProt
TreeGrafter
GO_Central		 PMID:7663514 PMID:9852112 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166 		JBrowse link
G GTF2F2 general transcription factor IIF subunit 2 ISO RGD PMID:7553866 RGD:9590319 NCBI chr13:45,120,510...45,284,893
Ensembl chr13:45,120,510...45,284,893 		JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 part_of ISO
IBA
IEA
IDA		 (PMID:9852112) RGD
GO_Central
TreeGrafter
UniProt
Ensembl		 PMID:7553866 PMID:9852112 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:9590319 NCBI chr11:18,322,567...18,367,045
Ensembl chr11:18,322,295...18,367,045 		JBrowse link
G GTF2H2 general transcription factor IIH subunit 2 part_of IDA
IBA
IEA		 (PMID:9852112) UniProt
GO_Central
TreeGrafter		 PMID:9852112 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:71,035,347...71,067,676
Ensembl chr 5:71,035,016...71,067,689 		JBrowse link
G GTF2H2C GTF2H2 family member C part_of IDA
IBA
IEA		 (PMID:9852112) UniProt
GO_Central
TreeGrafter		 PMID:9852112 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221 		JBrowse link
G GTF2H2C_2 GTF2H2 family member C, copy 2 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118
G GTF2H3 general transcription factor IIH subunit 3 part_of IDA
IBA
IEA		 (PMID:9852112) UniProt
GO_Central
TreeGrafter		 PMID:9852112 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr12:123,633,829...123,662,604
Ensembl chr12:123,633,739...123,662,604 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 part_of IDA
IEA
IBA		 (PMID:9852112) UniProt
TreeGrafter
GO_Central		 PMID:9852112 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:30,908,207...30,914,106
Ensembl chr 6:30,908,207...30,914,106 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 part_of IBA GO_Central GO_REF:0000033 NCBI chr 6:158,168,350...158,199,344
Ensembl chr 6:158,168,350...158,199,344 		JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component part_of NAS (PMID:11279242) UniProt PMID:11279242 NCBI chr10:97,458,324...97,498,794
Ensembl chr10:97,458,324...97,498,794 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase part_of IEA
IBA
IDA		 (PMID:9852112) InterPro
GO_Central
TreeGrafter
UniProt		 PMID:9852112 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr14:60,734,761...60,969,965
Ensembl chr14:60,734,742...60,969,965 		JBrowse link
transcription factor TFIIK complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNH cyclin H part_of IDA
IEA
IBA
IMP		 (PMID:8692841)
(PMID:23393140)		 UniProt
TreeGrafter
GO_Central
InterPro		 PMID:8692841 PMID:23393140 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:87,311,471...87,412,930
Ensembl chr 5:87,318,416...87,413,029 		JBrowse link
G CDK7 cyclin dependent kinase 7 part_of IDA
IMP
IBA
IEA		 (PMID:8692841)
(PMID:23393140)		 UniProt
GO_Central
TreeGrafter
InterPro		 PMID:8692841 PMID:23393140 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:69,234,795...69,277,430
Ensembl chr 5:69,234,795...69,277,430 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase part_of IDA (PMID:8692841) UniProt PMID:8692841 NCBI chr14:60,734,761...60,969,965
Ensembl chr14:60,734,742...60,969,965 		JBrowse link
transcription factor TFTC complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATXN7 ataxin 7 located_in NAS (PMID:10373431) ComplexPortal PMID:10373431 NCBI chr 3:63,863,144...64,003,462
Ensembl chr 3:63,863,155...64,003,462 		JBrowse link
G ATXN7L3 ataxin 7 like 3 located_in NAS (PMID:10373431) ComplexPortal PMID:10373431 NCBI chr17:44,191,805...44,199,884
Ensembl chr17:44,191,805...44,200,113 		JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit located_in NAS (PMID:10373431) ComplexPortal PMID:10373431 NCBI chr 8:109,334,347...109,345,954
Ensembl chr 8:109,334,324...109,345,954 		JBrowse link
G KAT2A lysine acetyltransferase 2A part_of
located_in		 IDA
NAS		 (PMID:10373431) UniProt
ComplexPortal		 PMID:10373431 NCBI chr17:42,113,111...42,121,367
Ensembl chr17:42,113,111...42,121,367 		JBrowse link
G SUPT3H SPT3 homolog, SAGA and STAGA complex component part_of
located_in		 IDA
NAS		 (PMID:10373431) UniProt
ComplexPortal		 PMID:10373431 NCBI chr 6:44,809,057...45,377,934
Ensembl chr 6:44,809,317...45,377,953 		JBrowse link
G TADA3 transcriptional adaptor 3 part_of
located_in		 IDA
NAS		 (PMID:10373431) UniProt
ComplexPortal		 PMID:10373431 NCBI chr 3:9,779,967...9,793,011
Ensembl chr 3:9,779,967...9,793,011 		JBrowse link
G TAF10 TATA-box binding protein associated factor 10 part_of
located_in		 IDA
NAS		 (PMID:10373431), (PMID:9603525) UniProt
ComplexPortal		 PMID:9603525 PMID:10373431 NCBI chr11:6,606,294...6,612,216
Ensembl chr11:6,606,294...6,612,539 		JBrowse link
G TAF12 TATA-box binding protein associated factor 12 part_of
located_in		 IDA
NAS		 (PMID:9603525)
(PMID:10373431)		 UniProt
ComplexPortal		 PMID:9603525 PMID:10373431 NCBI chr 1:28,602,850...28,648,269
Ensembl chr 1:28,587,829...28,648,291 		JBrowse link
G TAF2 TATA-box binding protein associated factor 2 part_of
located_in		 IDA
NAS		 (PMID:10373431) UniProt
ComplexPortal		 PMID:10373431 NCBI chr 8:119,730,774...119,832,841
Ensembl chr 8:119,730,774...119,832,863 		JBrowse link
G TAF4 TATA-box binding protein associated factor 4 part_of
located_in		 IDA
NAS		 (PMID:10373431), (PMID:9603525) UniProt
ComplexPortal		 PMID:9603525 PMID:10373431 NCBI chr20:61,974,798...62,065,881
Ensembl chr20:61,953,469...62,065,881 		JBrowse link
G TAF5 TATA-box binding protein associated factor 5 part_of
located_in		 IDA
NAS		 (PMID:10373431), (PMID:9603525) UniProt
ComplexPortal		 PMID:9603525 PMID:10373431 NCBI chr10:103,367,976...103,389,065
Ensembl chr10:103,367,966...103,389,065 		JBrowse link
G TAF5L TATA-box binding protein associated factor 5 like part_of
located_in		 IDA
NAS		 (PMID:10373431) UniProt
ComplexPortal		 PMID:10373431 NCBI chr 1:229,593,134...229,626,122
Ensembl chr 1:229,593,134...229,626,122 		JBrowse link
G TAF6 TATA-box binding protein associated factor 6 part_of
located_in		 IDA
NAS		 (PMID:9603525)
(PMID:10373431)		 UniProt
ComplexPortal		 PMID:9603525 PMID:10373431 NCBI chr 7:100,107,070...100,127,171
Ensembl chr 7:100,106,876...100,119,841 		JBrowse link
G TAF7 TATA-box binding protein associated factor 7 part_of
located_in		 IDA
NAS		 (PMID:9603525)
(PMID:10373431)		 UniProt
ComplexPortal		 PMID:9603525 PMID:10373431 NCBI chr 5:141,318,490...141,320,784
Ensembl chr 5:141,259,884...141,320,784 		JBrowse link
G TAF9 TATA-box binding protein associated factor 9 part_of
located_in		 IDA
IBA
NAS		 (PMID:15899866)
(PMID:10373431)		 UniProt
GO_Central
ComplexPortal		 PMID:10373431 PMID:15899866 GO_REF:0000033 NCBI chr 5:69,364,743...69,369,824
Ensembl chr 5:69,362,026...69,370,013 		JBrowse link
G TAF9B TATA-box binding protein associated factor 9b part_of IDA (PMID:15899866) UniProt PMID:15899866 NCBI chr  X:78,129,748...78,139,650
Ensembl chr  X:78,129,748...78,139,650 		JBrowse link
G TRRAP transformation/transcription domain associated protein part_of
located_in		 IDA
NAS		 (PMID:10373431) UniProt
ComplexPortal		 PMID:10373431 NCBI chr 7:98,878,532...99,013,241
Ensembl chr 7:98,877,933...99,050,831 		JBrowse link
G USP22 ubiquitin specific peptidase 22 located_in NAS (PMID:10373431) ComplexPortal PMID:10373431 NCBI chr17:20,999,596...21,043,419
Ensembl chr17:20,999,596...21,043,760 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20810
    protein-containing complex 7481
      transcription regulator complex 593
        RNA polymerase II transcription regulator complex 297
          ATF1-ATF4 transcription factor complex 2
          ATF4-CREB1 transcription factor complex 4
          C/EBP complex 2
          CCAAT-binding factor complex 6
          CHOP-ATF4 complex 2
          CHOP-C/EBP complex 3
          CLOCK-BMAL transcription complex 5
          CSL-Notch-Mastermind transcription factor complex 0
          ISGF3 complex 3
          M/G1 phase-specific MADS box-forkhead transcription factor complex 0
          MBF transcription complex 0
          Myc-Max complex 2
          Nkx-2.5 complex 1
          Pi Mi complex 0
          Pip2-Oaf1 complex 0
          Rb-E2F complex 5
          SBF transcription complex 0
          SMN-Gemin2 complex 1
          SRF-myogenin-E12 complex 0
          TEAD-YAP complex 3
          activating signal cointegrator 1 complex 3
          activin responsive factor complex 3
          beta-catenin-TCF complex + 13
          core mediator complex 26
          core-binding factor complex 3
          ecdysone receptor holocomplex + 0
          heteromeric SMAD protein complex 8
          insulin control element activator complex 0
          transcription factor AP-1 complex + 5
          transcription factor TFIIA complex 6
          transcription factor TFIID complex + 80
          transcription factor TFIIE complex 2
          transcription factor TFIIF complex 2
          transcription factor TFIIH core complex + 12
          transcription factor TFIIH holo complex + 14
          transcription factor TFIIK complex 3
          transcription factor TFTC complex 18
          upstream stimulatory factor complex 0
Path 2
Term Annotations click to browse term
  cellular_component 20810
    cellular anatomical entity 20423
      intracellular anatomical structure 16287
        intracellular organelle 14622
          intracellular membrane-bounded organelle 13434
            nucleus 8682
              nuclear protein-containing complex 1432
                RNA polymerase II transcription regulator complex 297
                  ATF1-ATF4 transcription factor complex 2
                  ATF4-CREB1 transcription factor complex 4
                  C/EBP complex 2
                  CCAAT-binding factor complex 6
                  CHOP-ATF4 complex 2
                  CHOP-C/EBP complex 3
                  CLOCK-BMAL transcription complex 5
                  CSL-Notch-Mastermind transcription factor complex 0
                  ISGF3 complex 3
                  M/G1 phase-specific MADS box-forkhead transcription factor complex 0
                  MBF transcription complex 0
                  Myc-Max complex 2
                  Nkx-2.5 complex 1
                  Pi Mi complex 0
                  Pip2-Oaf1 complex 0
                  Rb-E2F complex 5
                  SBF transcription complex 0
                  SMN-Gemin2 complex 1
                  SRF-myogenin-E12 complex 0
                  TEAD-YAP complex 3
                  activating signal cointegrator 1 complex 3
                  activin responsive factor complex 3
                  beta-catenin-TCF complex + 13
                  core mediator complex 26
                  core-binding factor complex 3
                  ecdysone receptor holocomplex + 0
                  heteromeric SMAD protein complex 8
                  insulin control element activator complex 0
                  transcription factor AP-1 complex + 5
                  transcription factor TFIIA complex 6
                  transcription factor TFIID complex + 80
                  transcription factor TFIIE complex 2
                  transcription factor TFIIF complex 2
                  transcription factor TFIIH core complex + 12
                  transcription factor TFIIH holo complex + 14
                  transcription factor TFIIK complex 3
                  transcription factor TFTC complex 18
                  upstream stimulatory factor complex 0
paths to the root