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ONTOLOGY REPORT - ANNOTATIONS


Term:beta-catenin-TCF complex
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Accession:GO:1990907 term browser browse the term
Definition:A protein complex that contains beta-catenin and a member of the T-cell factor (TCF)/lymphoid enhancer binding factor (LEF) family of transcription factors.
Synonyms:narrow_synonym: beta-catenin/LEF complex
 related_synonym: beta-catenin/T-cell factor complex;   beta-catenin/lymphoid enhancer binding factor complex
 xref: IntAct:EBI-11424678;   IntAct:EBI-11425837


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beta-catenin-TCF complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl9 BCL9, transcription coactivator ISO
IBA
UniProtKB:P15884|UniProtKB:P35222 (PMID:11955446), (PMID:28296634)
PMID:21873635
RGD PMID:11955446, PMID:28296634, PMID:21873635 RGD:13792537 NCBI chr 2:199,334,644...199,420,083
Ensembl chr 2:199,334,664...199,354,793
JBrowse link
G Bcl9l BCL9 like ISO
IBA
(PMID:28296634)
PMID:21873635
RGD PMID:28296634, PMID:21873635 RGD:13792537 NCBI chr 8:48,805,684...48,835,794
Ensembl chr 8:48,805,684...48,834,312
JBrowse link
G Ctnnb1 catenin beta 1 ISO UniProtKB:O00512|UniProtKB:P15884|UniProtKB:Q9UJU2 (PMID:11955446), (PMID:18936100), (PMID:28296634)
(MGI:MGI:1196720|PMID:9488439), (MGI:MGI:4836133|PMID:20371816)
RGD PMID:9488439, PMID:11955446, PMID:18936100, PMID:20371816, PMID:28296634 MGI:MGI:1196720, MGI:MGI:4836133 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ldb1 LIM domain binding 1 ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 1:265,772,729...265,798,442
Ensembl chr 1:265,785,409...265,798,167
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO
IEA
UniProtKB:P35222 (PMID:18936100)
GO_REF:0000107
(MGI:MGI:4836133|PMID:20371816)
RGD
Ensembl
PMID:18936100, PMID:20371816 GO_REF:0000107, MGI:MGI:4836133 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Pygo2 pygopus family PHD finger 2 ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 2:188,757,167...188,762,285
Ensembl chr 2:188,757,489...188,762,282
JBrowse link
G Tcf4 transcription factor 4 ISO UniProtKB:O00512|UniProtKB:P35222 (PMID:11955446) RGD PMID:11955446 NCBI chr18:65,285,320...65,507,983
Ensembl chr18:65,155,685...65,507,977
JBrowse link
G Tle1 TLE family member 1, transcriptional corepressor ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 5:88,546,607...88,630,277
Ensembl chr 5:88,546,568...88,629,491
JBrowse link
G Tle3 TLE family member 3, transcriptional corepressor ISO (PMID:28296634) RGD PMID:28296634 NCBI chr 8:66,296,509...66,342,186
Ensembl chr 8:66,296,883...66,342,176
JBrowse link
G Tle4 TLE family member 4, transcriptional corepressor IEA
ISO
GO_REF:0000107
(PMID:28296634)
Ensembl
RGD
PMID:28296634 GO_REF:0000107 NCBI chr 1:231,394,606...231,531,396
Ensembl chr 1:231,393,379...231,530,786
JBrowse link
beta-catenin-TCF7L2 complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12651860), (PMID:9065401), (PMID:9065402)
UniProt
Ensembl
RGD
PMID:9065401, PMID:9065402, PMID:12651860 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Tcf4 transcription factor 4 ISO (PMID:12651860) RGD PMID:12651860 NCBI chr18:65,285,320...65,507,983
Ensembl chr18:65,155,685...65,507,977
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO (PMID:9065401), (PMID:9065402) RGD PMID:9065401, PMID:9065402 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    protein-containing complex 6092
      transcription regulator complex 434
        RNA polymerase II transcription regulator complex 162
          beta-catenin-TCF complex 11
            beta-catenin-TCF7L2 complex 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.