Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:transcription factor TFTC complex
go back to main search page
Accession:GO:0033276 term browser browse the term
Definition:A protein complex that does not contain either a TATA-binding protein (TBP) or a TBP-like factor, but is composed of several TAFIIs and other proteins, including a histone acetyltransferase. This complex is able to nucleate transcription initiation by RNA polymerase II, can mediate transcriptional activation, and has histone acetyltransferase activity.


show annotations for term's descendants           Sort by:
 
transcription factor TFTC complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a lysine acetyltransferase 2A ISO (PMID:10373431) RGD PMID:10373431 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
JBrowse link
G LOC690283 similar to TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:60,105,788...60,108,103
Ensembl chr 1:60,106,034...60,107,039
JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component ISO
IEA
(PMID:10373431)
GO_REF:0000107
RGD
Ensembl
PMID:10373431 GO_REF:0000107 NCBI chr 9:18,249,565...18,604,814
Ensembl chr 9:18,319,246...18,371,856
JBrowse link
G Tada3 transcriptional adaptor 3 ISO (PMID:10373431) RGD PMID:10373431 NCBI chr 4:145,318,417...145,330,291
Ensembl chr 4:145,318,435...145,329,878
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525, PMID:10373431 NCBI chr 1:170,585,160...170,586,428
Ensembl chr 1:170,585,167...170,586,603
JBrowse link
G Taf12 TATA-box binding protein associated factor 12 ISO (PMID:9603525) RGD PMID:9603525 NCBI chr 5:150,459,701...150,476,521
Ensembl chr 5:150,459,713...150,475,186
JBrowse link
G Taf2 TATA-box binding protein associated factor 2 ISO (PMID:10373431) RGD PMID:10373431 NCBI chr 7:94,698,987...94,755,924
Ensembl chr 7:94,698,987...94,755,924
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525, PMID:10373431 NCBI chr 3:175,300,842...175,364,655
Ensembl chr 3:175,301,879...175,327,689
JBrowse link
G Taf5 TATA-box binding protein associated factor 5 ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525, PMID:10373431 NCBI chr 1:266,844,480...266,859,965
Ensembl chr 1:266,844,480...266,859,965
JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like ISO (PMID:10373431) RGD PMID:10373431 NCBI chr19:56,781,854...56,801,005
Ensembl chr19:56,781,859...56,799,445
JBrowse link
G Taf6 TATA-box binding protein associated factor 6 IEA
ISO
GO_REF:0000107
(PMID:9603525)
Ensembl
RGD
PMID:9603525 GO_REF:0000107 NCBI chr12:19,320,269...19,328,706
Ensembl chr12:19,320,271...19,328,637
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 ISO (PMID:9603525) RGD PMID:9603525 NCBI chr18:30,779,149...30,781,297
Ensembl chr18:30,779,150...30,781,292
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO
IBA
(PMID:15899866)
PMID:21873635
RGD PMID:15899866, PMID:21873635 RGD:13792537 NCBI chr 2:30,664,407...30,668,414
Ensembl chr 2:30,664,639...30,668,414
JBrowse link
G Taf9b TATA-box binding protein associated factor 9b ISO (PMID:15899866) RGD PMID:15899866 NCBI chr  X:77,281,234...77,295,238
Ensembl chr  X:77,281,210...77,295,426
JBrowse link
G Trrap transformation/transcription domain-associated protein ISO (PMID:10373431) RGD PMID:10373431 NCBI chr12:11,537,950...11,627,563
Ensembl chr12:11,537,950...11,627,563
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      nucleoplasm 3398
        RNA polymerase II, holoenzyme 84
          transcription factor TFTC complex 15
Path 2
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      organelle 13258
        membrane-bounded organelle 11449
          intracellular membrane-bounded organelle 10704
            nucleus 7183
              nuclear lumen 4262
                nucleoplasm 3398
                  histone acetyltransferase complex 89
                    SAGA-type complex 26
                      transcription factor TFTC complex 15
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.