NCOA2 (nuclear receptor coactivator 2) - Rat Genome Database

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Gene: NCOA2 (nuclear receptor coactivator 2) Homo sapiens
Analyze
Symbol: NCOA2
Name: nuclear receptor coactivator 2
RGD ID: 732737
HGNC Page HGNC:7669
Description: Enables RNA polymerase II-specific DNA-binding transcription factor binding activity; nuclear receptor coactivator activity; and protein domain specific binding activity. Involved in positive regulation of transcription by RNA polymerase II. Located in RNA polymerase II transcription regulator complex and nuclear body. Part of protein-containing complex. Implicated in acute myeloid leukemia; colorectal carcinoma; lung non-small cell carcinoma; and prostate adenocarcinoma. Biomarker of colorectal adenocarcinoma; colorectal carcinoma; malignant pleural mesothelioma; prostate cancer; and stomach cancer.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: bHLHe75; class E basic helix-loop-helix protein 75; glucocorticoid receptor-interacting protein-1; GRIP1; hTIF2; KAT13C; MGC138808; NCoA-2; p160 steroid receptor coactivator 2; SRC2; TIF2; transcriptional intermediary factor 2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
NCBI Annotation Information: Note: GRIP1 (Gene ID: 23426) and NCOA2 (Gene ID: 10499) share the GRIP1 symbol/alias in common. GRIP1 is a widely used alternative name for nuclear receptor coactivator 2 (NCOA2), which can be confused with the official symbol for glutamate receptor-interacting protein 1 (GRIP1). [06 Jul 2018]
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38870,109,782 - 70,456,446 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl870,109,782 - 70,403,808 (-)EnsemblGRCh38hg38GRCh38
GRCh37871,022,017 - 71,316,452 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36871,186,821 - 71,478,574 (-)NCBINCBI36Build 36hg18NCBI36
Build 34871,186,820 - 71,478,574NCBI
Celera867,021,935 - 67,313,703 (-)NCBICelera
Cytogenetic Map8q13.3NCBI
HuRef866,517,566 - 66,809,329 (-)NCBIHuRef
CHM1_1871,079,808 - 71,371,655 (-)NCBICHM1_1
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (EXP)
(R)-linalyl acetate  (EXP)
(S)-colchicine  (EXP)
1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2'-Dihydroxy-4-methoxybenzophenone  (EXP)
2,3,4,5-Tetrachloro-4'-biphenylol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-[(2,4-dichlorophenyl)methyl]-4-(2,4,4-trimethylpentan-2-yl)phenol  (ISO)
2-hydroxypropanoic acid  (EXP)
22,23-dihydroavermectin B1a  (EXP)
3,3',5'-triiodo-L-thyronine  (EXP)
3,3',5'-triiodothyronine  (EXP)
3,3',5,5'-tetraiodothyroacetic acid  (EXP)
3,3',5-triiodo-L-thyronine  (EXP)
3,3'-diindolylmethane  (EXP)
3,3,4,4,5,5,6,6,7,7,8,8,9,9,10,10,10-heptadecafluoro-1-decanol  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
3beta-hydroxycholest-5-en-26-oic acid  (EXP)
4'-epidoxorubicin  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-terpineol  (EXP)
4-tert-Octylphenol  (EXP)
acetamide  (ISO)
Acetyl tributyl citrate  (EXP)
acrolein  (EXP)
acrylamide  (EXP)
afimoxifene  (EXP)
aflatoxin B1  (EXP)
all-trans-acitretin  (EXP)
all-trans-retinoic acid  (EXP,ISO)
alpha-pinene  (EXP)
alpha-terpineol  (EXP)
ammonium chloride  (ISO)
amphetamine  (ISO)
androst-4-ene-3,17-dione  (EXP)
aristolochic acid A  (EXP)
arsenite(3-)  (EXP)
arsenous acid  (EXP)
atrazine  (ISO)
benidipine  (EXP)
benzo[a]pyrene  (EXP,ISO)
Benzo[ghi]perylene  (EXP)
Benzyl parahydroxybenzoate  (EXP)
bezafibrate  (EXP)
bicalutamide  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
butamben  (EXP)
butanal  (EXP)
Butylparaben  (EXP)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
caffeine  (EXP)
calcitriol  (EXP,ISO)
chenodeoxycholic acid  (EXP)
cholesterol  (ISO)
cilnidipine  (EXP)
clevidipine  (EXP)
cobalt dichloride  (EXP)
coenzyme Q10  (EXP)
coumarin  (EXP)
coumestrol  (EXP)
Cuprizon  (ISO)
cyproterone acetate  (EXP)
daidzein  (EXP)
daunorubicin  (EXP)
DDT  (ISO)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (EXP)
dibutyl phthalate  (ISO)
dicrotophos  (EXP)
diethylstilbestrol  (EXP,ISO)
dioxygen  (EXP,ISO)
Doramectin  (EXP)
doxorubicin  (EXP)
elemental selenium  (EXP)
emamectin  (EXP)
emodin  (ISO)
entinostat  (EXP)
eprinomectin  (EXP)
ethanol  (ISO)
Ethyl salicylate  (EXP)
ethylparaben  (EXP)
Falecalcitriol  (EXP)
felodipine  (EXP)
flavonol  (EXP)
FR900359  (EXP)
fulvestrant  (EXP)
furan  (ISO)
galangin  (EXP)
geldanamycin  (EXP)
genistein  (EXP,ISO)
gentamycin  (ISO)
guggulsterone  (EXP)
GW 1929  (EXP)
hexadecanoic acid  (EXP)
Isradipine  (EXP)
ivermectin  (EXP)
lacidipine  (EXP)
lead diacetate  (EXP,ISO)
linalyl acetate  (EXP)
linoleic acid  (EXP)
lipopolysaccharide  (EXP,ISO)
methidathion  (ISO)
methotrexate  (ISO)
methoxychlor  (ISO)
methyl salicylate  (EXP)
methylparaben  (EXP)
methylseleninic acid  (EXP)
mifepristone  (EXP)
milbemycin  (EXP)
N-benzoyl-L-alanine  (EXP)
nicardipine  (EXP)
nimodipine  (EXP)
oxybenzone  (EXP)
ozone  (EXP,ISO)
p-tert-Amylphenol  (EXP)
paracetamol  (EXP)
pentanal  (EXP)
pirinixic acid  (EXP)
potassium chromate  (EXP)
progesterone  (ISO)
propylparaben  (EXP)
quercetin  (EXP)
rac-lactic acid  (EXP)
raloxifene  (EXP)
resveratrol  (EXP)
rifampicin  (EXP)
Selamectin  (EXP)
selenium atom  (EXP)
sodium arsenite  (ISO)
succimer  (ISO)
tamoxifen  (EXP)
tetrachloromethane  (ISO)
thyroxine  (EXP)
tiratricol  (EXP)
titanium dioxide  (ISO)
toxaphene  (EXP)
trichostatin A  (EXP)
triclosan  (EXP)
trimellitic anhydride  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
tungsten  (ISO)
valproic acid  (EXP,ISO)
vitamin E  (EXP)
vorinostat  (EXP)
wogonin  (ISO)
zearalenone  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. The mutational landscape of prostate cancer. Barbieri CE, etal., Eur Urol. 2013 Oct;64(4):567-76. doi: 10.1016/j.eururo.2013.05.029. Epub 2013 May 18.
2. Androgen receptor coregulators and their involvement in the development and progression of prostate cancer. Chmelar R, etal., Int J Cancer. 2007 Feb 15;120(4):719-33.
3. Coactivator SRC-2-dependent metabolic reprogramming mediates prostate cancer survival and metastasis. Dasgupta S, etal., J Clin Invest. 2015 Mar 2;125(3):1174-88. doi: 10.1172/JCI76029. Epub 2015 Feb 9.
4. MOZ-TIF2-induced acute myeloid leukemia requires the MOZ nucleosome binding motif and TIF2-mediated recruitment of CBP. Deguchi K, etal., Cancer Cell. 2003 Mar;3(3):259-71.
5. Genetic and Environmental Models of Circadian Disruption Link SRC-2 Function to Hepatic Pathology. Fleet T, etal., J Biol Rhythms. 2016 Oct;31(5):443-60. doi: 10.1177/0748730416657921. Epub 2016 Jul 17.
6. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
7. Estrogen receptor alpha/beta, AIB1, and TIF2 in colorectal carcinogenesis: do coregulators have prognostic significance? Grivas PD, etal., Int J Colorectal Dis. 2009 Jun;24(6):613-22. doi: 10.1007/s00384-009-0647-9. Epub 2009 Feb 6.
8. Coregulators in nuclear estrogen receptor action: from concept to therapeutic targeting. Hall JM and McDonnell DP, Mol Interv. 2005 Dec;5(6):343-57.
9. Differential regulation of steroid nuclear receptor coregulator expression between normal and neoplastic prostate epithelial cells. Heemers HV, etal., Prostate. 2010 Jun 15;70(9):959-70.
10. Novel glucocorticoid receptor coactivator effector mechanisms. Jenkins BD, etal., Trends Endocrinol Metab. 2001 Apr;12(3):122-6.
11. Sustained expression of steroid receptor coactivator SRC-2/TIF-2 is associated with better prognosis in malignant pleural mesothelioma. Jennings CJ, etal., J Thorac Oncol. 2012 Jan;7(1):243-8. doi: 10.1097/JTO.0b013e31822f6544.
12. Subfertility linked to combined luteal insufficiency and uterine progesterone resistance. Konno T, etal., Endocrinology. 2010 Sep;151(9):4537-50. Epub 2010 Jul 21.
13. Prognostic implications of genetic variants in advanced non-small cell lung cancer: a genome-wide association study. Lee Y, etal., Carcinogenesis. 2013 Feb;34(2):307-13. doi: 10.1093/carcin/bgs356. Epub 2012 Nov 8.
14. Knockdown of NCOA2 Inhibits the Growth and Progression of Gastric Cancer by Affecting the Wnt Signaling Pathway-Related Protein Expression. Lin Z, etal., Technol Cancer Res Treat. 2020 Jan-Dec;19:1533033820928072. doi: 10.1177/1533033820928072.
15. The human glucocorticoid receptor: molecular basis of biologic function. Nicolaides NC, etal., Steroids. 2010 Jan;75(1):1-12. Epub 2009 Oct 7.
16. A Sleeping Beauty mutagenesis screen reveals a tumor suppressor role for Ncoa2/Src-2 in liver cancer. O'Donnell KA, etal., Proc Natl Acad Sci U S A. 2012 May 22;109(21):E1377-86. doi: 10.1073/pnas.1115433109. Epub 2012 May 3.
17. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
18. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. Dynamic and combinatorial control of gene expression by nuclear retinoic acid receptors (RARs). Rochette-Egly C and Germain P, Nucl Recept Signal. 2009 May 8;7:e005.
21. SRC-2-mediated coactivation of anti-tumorigenic target genes suppresses MYC-induced liver cancer. Suresh S, etal., PLoS Genet. 2017 Mar 8;13(3):e1006650. doi: 10.1371/journal.pgen.1006650. eCollection 2017 Mar.
22. Estrogen signaling in colorectal carcinoma microenvironment: expression of ERbeta1, AIB-1, and TIF-2 is upregulated in cancer-associated myofibroblasts and correlates with disease progression. Tzelepi V, etal., Virchows Arch. 2009 Apr;454(4):389-99. doi: 10.1007/s00428-009-0740-z. Epub 2009 Mar 7.
23. Interactions of the mineralocorticoid receptor--within and without. Yang J and Fuller PJ, Mol Cell Endocrinol. 2012 Mar 24;350(2):196-205. doi: 10.1016/j.mce.2011.07.001. Epub 2011 Jul 18.
24. Disruption of NCOA2 by recurrent fusion with LACTB2 in colorectal cancer. Yu J, etal., Oncogene. 2016 Jan 14;35(2):187-95. doi: 10.1038/onc.2015.72. Epub 2015 Mar 30.
Additional References at PubMed
PMID:8670870   PMID:9111344   PMID:9192892   PMID:9430642   PMID:9558366   PMID:9590696   PMID:9717843   PMID:9751728   PMID:9774463   PMID:9812974   PMID:9920895   PMID:10381882  
PMID:10454563   PMID:10478845   PMID:10490106   PMID:10594042   PMID:10598588   PMID:10617585   PMID:10652338   PMID:10692587   PMID:10706629   PMID:10748178   PMID:11014206   PMID:11050077  
PMID:11085509   PMID:11117530   PMID:11265755   PMID:11266503   PMID:11376110   PMID:11435616   PMID:11477071   PMID:11500849   PMID:11514567   PMID:11518802   PMID:11583620   PMID:11704662  
PMID:11818499   PMID:11851396   PMID:11877444   PMID:11931740   PMID:11937504   PMID:11964378   PMID:11971985   PMID:11981034   PMID:12024042   PMID:12050280   PMID:12060666   PMID:12082103  
PMID:12089346   PMID:12114525   PMID:12130539   PMID:12145209   PMID:12151000   PMID:12208521   PMID:12403846   PMID:12477932   PMID:12481024   PMID:12482968   PMID:12503607   PMID:12554772  
PMID:12588987   PMID:12612084   PMID:12630920   PMID:12682292   PMID:12714702   PMID:12756300   PMID:12796488   PMID:12810069   PMID:12893883   PMID:12970370   PMID:14500758   PMID:14578343  
PMID:14593076   PMID:14662770   PMID:14747462   PMID:14757047   PMID:14766010   PMID:14966121   PMID:14966289   PMID:15026545   PMID:15072553   PMID:15146197   PMID:15184363   PMID:15207724  
PMID:15231721   PMID:15258145   PMID:15557560   PMID:15563469   PMID:15572661   PMID:15641800   PMID:15657427   PMID:15684378   PMID:15698540   PMID:15731352   PMID:15766871   PMID:15769988  
PMID:15888456   PMID:15919723   PMID:15987788   PMID:15988012   PMID:16051665   PMID:16344550   PMID:16344560   PMID:16362036   PMID:16373399   PMID:16410316   PMID:16613851   PMID:16645043  
PMID:16649994   PMID:16728408   PMID:16860316   PMID:16923966   PMID:16930961   PMID:16957778   PMID:17081983   PMID:17363140   PMID:17476305   PMID:17513608   PMID:17635946   PMID:17697320  
PMID:17704997   PMID:17932106   PMID:17947383   PMID:18174919   PMID:18267973   PMID:18281529   PMID:18499756   PMID:18511550   PMID:18656523   PMID:18660489   PMID:18798693   PMID:18845648  
PMID:19052561   PMID:19074285   PMID:19095746   PMID:19183483   PMID:19240160   PMID:19255064   PMID:19264843   PMID:19453261   PMID:19460354   PMID:19462000   PMID:19596656   PMID:19641626  
PMID:19805480   PMID:19828458   PMID:19913121   PMID:20047289   PMID:20195357   PMID:20348541   PMID:20374707   PMID:20379614   PMID:20448036   PMID:20628086   PMID:21049972   PMID:21059860  
PMID:21152046   PMID:21195347   PMID:21220509   PMID:21370964   PMID:21478865   PMID:21492233   PMID:21735116   PMID:21873635   PMID:22034177   PMID:22337624   PMID:22379092   PMID:22504882  
PMID:22581837   PMID:23132854   PMID:23160820   PMID:23178929   PMID:23247143   PMID:23252872   PMID:23319000   PMID:23462962   PMID:23463663   PMID:23542129   PMID:23707616   PMID:23936147  
PMID:24124145   PMID:24187139   PMID:24204309   PMID:24213582   PMID:24258712   PMID:24529706   PMID:24561505   PMID:24571987   PMID:24586072   PMID:24811170   PMID:24839999   PMID:24856853  
PMID:24888778   PMID:24905738   PMID:24952745   PMID:25281560   PMID:25295534   PMID:25544563   PMID:25609649   PMID:25986860   PMID:26040939   PMID:26066330   PMID:26098207   PMID:26098214  
PMID:26149616   PMID:26186194   PMID:26261634   PMID:26267537   PMID:26350169   PMID:26438513   PMID:26487511   PMID:26496610   PMID:26553876   PMID:26638075   PMID:26733313   PMID:26799514  
PMID:26820900   PMID:26869487   PMID:26898479   PMID:26970301   PMID:26972000   PMID:26983699   PMID:27432908   PMID:27544802   PMID:27609421   PMID:27633981   PMID:28390937   PMID:28514442  
PMID:28611094   PMID:28611215   PMID:28794006   PMID:28890360   PMID:29117863   PMID:29202468   PMID:29395067   PMID:29507755   PMID:29596896   PMID:29877893   PMID:30048685   PMID:30177747  
PMID:30179902   PMID:30273195   PMID:30325183   PMID:31182584   PMID:31751430   PMID:32344865   PMID:32513696   PMID:33574497   PMID:33593309   PMID:33640491   PMID:33647291   PMID:33961781  
PMID:34067464   PMID:34079125   PMID:34624096   PMID:34795231   PMID:35140242   PMID:35271311   PMID:35439318   PMID:35785414   PMID:35831314   PMID:35914814   PMID:36309571   PMID:36613751  
PMID:36656711   PMID:37689310   PMID:37704626   PMID:37827155   PMID:37870842   PMID:38280479   PMID:38297188   PMID:38360978  


Genomics

Comparative Map Data
NCOA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38870,109,782 - 70,456,446 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl870,109,782 - 70,403,808 (-)EnsemblGRCh38hg38GRCh38
GRCh37871,022,017 - 71,316,452 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36871,186,821 - 71,478,574 (-)NCBINCBI36Build 36hg18NCBI36
Build 34871,186,820 - 71,478,574NCBI
Celera867,021,935 - 67,313,703 (-)NCBICelera
Cytogenetic Map8q13.3NCBI
HuRef866,517,566 - 66,809,329 (-)NCBIHuRef
CHM1_1871,079,808 - 71,371,655 (-)NCBICHM1_1
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBIT2T-CHM13v2.0
Ncoa2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39113,209,329 - 13,444,451 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl113,209,329 - 13,444,307 (-)EnsemblGRCm39 Ensembl
GRCm38113,139,105 - 13,374,227 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl113,139,105 - 13,374,083 (-)EnsemblGRCm38mm10GRCm38
MGSCv37113,129,240 - 13,364,164 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36113,127,689 - 13,359,278 (-)NCBIMGSCv36mm8
Celera113,103,226 - 13,334,430 (-)NCBICelera
Cytogenetic Map1A3NCBI
cM Map14.12NCBI
Ncoa2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8510,618,712 - 10,852,776 (+)NCBIGRCr8
mRatBN7.255,835,642 - 6,069,693 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl55,835,706 - 6,067,451 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx58,132,076 - 8,209,657 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.059,770,968 - 9,848,544 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.059,460,403 - 9,538,097 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.055,466,544 - 5,696,540 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl55,616,483 - 5,694,598 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0510,306,581 - 10,538,264 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.455,197,891 - 5,275,776 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.155,197,890 - 5,273,000 (+)NCBI
Celera55,570,901 - 5,648,759 (+)NCBICelera
Cytogenetic Map5q11NCBI
Ncoa2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554449,313,447 - 9,584,913 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554449,313,748 - 9,587,109 (+)NCBIChiLan1.0ChiLan1.0
NCOA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2785,839,497 - 86,141,138 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1861,469,337 - 61,770,965 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0866,632,139 - 66,929,526 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1868,293,012 - 68,480,104 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl868,293,018 - 68,400,479 (-)Ensemblpanpan1.1panPan2
NCOA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12919,253,849 - 19,471,640 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2919,222,842 - 19,545,371 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2919,511,986 - 19,805,562 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02919,347,144 - 19,643,120 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2919,347,185 - 19,642,297 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12919,386,646 - 19,682,493 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02919,452,837 - 19,748,399 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02919,733,575 - 20,029,399 (-)NCBIUU_Cfam_GSD_1.0
Ncoa2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530359,680,707 - 59,940,562 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649614,844,855 - 15,016,454 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649614,844,923 - 15,102,922 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NCOA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl464,954,238 - 65,246,572 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1464,888,029 - 65,245,757 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2470,584,741 - 70,791,313 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NCOA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1865,855,232 - 66,151,733 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl865,855,235 - 66,040,947 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603975,279,759 - 75,586,607 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ncoa2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474420,938,555 - 21,078,690 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474420,795,385 - 21,078,706 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NCOA2
77 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 8q13.2-13.3(chr8:68488015-71476177)x1 copy number loss See cases [RCV000050801] Chr8:68488015..71476177 [GRCh38]
Chr8:69400250..72388412 [GRCh37]
Chr8:69562804..72550966 [NCBI36]
Chr8:8q13.2-13.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q12.1-21.13(chr8:57361243-79170078)x3 copy number gain See cases [RCV000053653] Chr8:57361243..79170078 [GRCh38]
Chr8:58273802..80082313 [GRCh37]
Chr8:58436356..80244868 [NCBI36]
Chr8:8q12.1-21.13
pathogenic
GRCh38/hg38 8q12.3-21.13(chr8:61691800-82537696)x3 copy number gain See cases [RCV000053654] Chr8:61691800..82537696 [GRCh38]
Chr8:62604359..83449931 [GRCh37]
Chr8:62766913..83612486 [NCBI36]
Chr8:8q12.3-21.13
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|See cases [RCV000053604] Chr8:244417..145054775 [GRCh38]
Chr8:194417..146280161 [GRCh37]
Chr8:184417..146250965 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q12.3-21.11(chr8:62230636-73227786)x1 copy number loss See cases [RCV000054242] Chr8:62230636..73227786 [GRCh38]
Chr8:63143195..74140021 [GRCh37]
Chr8:63305749..74302575 [NCBI36]
Chr8:8q12.3-21.11
pathogenic
NM_006540.2(NCOA2):c.817C>T (p.Arg273Cys) single nucleotide variant Malignant melanoma [RCV000068382] Chr8:70163480 [GRCh38]
Chr8:71075715 [GRCh37]
Chr8:71238269 [NCBI36]
Chr8:8q13.3
not provided
NM_006540.2(NCOA2):c.-20+16306G>C single nucleotide variant Lung cancer [RCV000107645] Chr8:70280438 [GRCh38]
Chr8:71192673 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.2(NCOA2):c.-76-6429A>G single nucleotide variant Lung cancer [RCV000107646] Chr8:70303229 [GRCh38]
Chr8:71215464 [GRCh37]
Chr8:8q13.3
uncertain significance
GRCh38/hg38 8q13.2-13.3(chr8:68987881-71640028)x1 copy number loss See cases [RCV000134801] Chr8:68987881..71640028 [GRCh38]
Chr8:69900116..72552263 [GRCh37]
Chr8:70062670..72714817 [NCBI36]
Chr8:8q13.2-13.3
pathogenic
GRCh38/hg38 8q13.1-22.1(chr8:66171669-93505509)x3 copy number gain See cases [RCV000137050] Chr8:66171669..93505509 [GRCh38]
Chr8:67083904..94517737 [GRCh37]
Chr8:67246458..94586913 [NCBI36]
Chr8:8q13.1-22.1
pathogenic
GRCh38/hg38 8q13.1-21.13(chr8:66633845-80100089)x3 copy number gain See cases [RCV000138027] Chr8:66633845..80100089 [GRCh38]
Chr8:67546080..81012324 [GRCh37]
Chr8:67708634..81174879 [NCBI36]
Chr8:8q13.1-21.13
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3 copy number gain See cases [RCV000138643] Chr8:241605..145054781 [GRCh38]
Chr8:191605..146280167 [GRCh37]
Chr8:181605..146250971 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q13.2-13.3(chr8:68987835-71663466)x1 copy number loss See cases [RCV000138251] Chr8:68987835..71663466 [GRCh38]
Chr8:69900070..72575701 [GRCh37]
Chr8:70062624..72738255 [NCBI36]
Chr8:8q13.2-13.3
pathogenic
GRCh38/hg38 8q11.1-24.3(chr8:46031340-139285494)x3 copy number gain See cases [RCV000139539] Chr8:46031340..139285494 [GRCh38]
Chr8:46942962..140297737 [GRCh37]
Chr8:47062127..140366919 [NCBI36]
Chr8:8q11.1-24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3 copy number gain See cases [RCV000141808] Chr8:208048..145070385 [GRCh38]
Chr8:158048..146295771 [GRCh37]
Chr8:148048..146266575 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p21.3-q24.3(chr8:21291522-145070385)x3 copy number gain See cases [RCV000142021] Chr8:21291522..145070385 [GRCh38]
Chr8:21149033..146295771 [GRCh37]
Chr8:21193313..146266575 [NCBI36]
Chr8:8p21.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3 copy number gain See cases [RCV000142858] Chr8:226452..145068712 [GRCh38]
Chr8:176452..146294098 [GRCh37]
Chr8:166452..146264902 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000148092] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8q13.2-13.3(chr8:69955127-72552241)x1 copy number loss See cases [RCV000240421] Chr8:69955127..72552241 [GRCh37]
Chr8:8q13.2-13.3
pathogenic
GRCh37/hg19 8q13.3-21.13(chr8:70971013-82019151)x3 copy number gain See cases [RCV000240367] Chr8:70971013..82019151 [GRCh37]
Chr8:8q13.3-21.13
likely pathogenic
GRCh37/hg19 8q13.2-13.3(chr8:69899336-72597645)x1 copy number loss See cases [RCV000446721] Chr8:69899336..72597645 [GRCh37]
Chr8:8q13.2-13.3
pathogenic
GRCh37/hg19 8q13.3(chr8:71077789-72943097)x3 copy number gain See cases [RCV000446539] Chr8:71077789..72943097 [GRCh37]
Chr8:8q13.3
uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158991-146280828)x3 copy number gain See cases [RCV000447507] Chr8:158991..146280828 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771) copy number gain See cases [RCV000510234] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8q13.2-13.3(chr8:69899336-72597645)x1 copy number loss See cases [RCV000510185] Chr8:69899336..72597645 [GRCh37]
Chr8:8q13.2-13.3
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771)x3 copy number gain See cases [RCV000511095] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
NM_006540.4(NCOA2):c.3826A>G (p.Met1276Val) single nucleotide variant Inborn genetic diseases [RCV003276432] Chr8:70126903 [GRCh38]
Chr8:71039138 [GRCh37]
Chr8:8q13.3
uncertain significance
GRCh37/hg19 8q13.3(chr8:71198990-71920676)x1 copy number loss See cases [RCV000512294] Chr8:71198990..71920676 [GRCh37]
Chr8:8q13.3
uncertain significance
GRCh37/hg19 8p23.1-q24.3(chr8:12490999-146295771)x3 copy number gain See cases [RCV000512169] Chr8:12490999..146295771 [GRCh37]
Chr8:8p23.1-q24.3
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:164984-146293414)x3 copy number gain not provided [RCV000747254] Chr8:164984..146293414 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:10213-146293414)x3 copy number gain not provided [RCV000747248] Chr8:10213..146293414 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p12-q24.3(chr8:31936551-146295771)x3 copy number gain not provided [RCV000848192] Chr8:31936551..146295771 [GRCh37]
Chr8:8p12-q24.3
pathogenic
NM_006540.4(NCOA2):c.846T>G (p.Ser282=) single nucleotide variant not provided [RCV000897792] Chr8:70162841 [GRCh38]
Chr8:71075076 [GRCh37]
Chr8:8q13.3
likely benign
NM_006540.4(NCOA2):c.4086C>T (p.Gly1362=) single nucleotide variant not provided [RCV000938992] Chr8:70124696 [GRCh38]
Chr8:71036931 [GRCh37]
Chr8:8q13.3
likely benign
NM_006540.4(NCOA2):c.3394G>A (p.Val1132Ile) single nucleotide variant not provided [RCV000893421] Chr8:70128911 [GRCh38]
Chr8:71041146 [GRCh37]
Chr8:8q13.3
likely benign
NM_006540.4(NCOA2):c.1653G>A (p.Ser551=) single nucleotide variant not provided [RCV000962921] Chr8:70156712 [GRCh38]
Chr8:71068947 [GRCh37]
Chr8:8q13.3
benign|likely benign
NM_006540.4(NCOA2):c.3666T>C (p.Pro1222=) single nucleotide variant not provided [RCV000965080] Chr8:70128448 [GRCh38]
Chr8:71040683 [GRCh37]
Chr8:8q13.3
benign
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not provided [RCV000848478] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8q13.3(chr8:70848713-71632067)x3 copy number gain not provided [RCV001006112] Chr8:70848713..71632067 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.18A>G (p.Glu6=) single nucleotide variant not provided [RCV000956642] Chr8:70216728 [GRCh38]
Chr8:71128963 [GRCh37]
Chr8:8q13.3
benign
GRCh37/hg19 8q13.3(chr8:71244655-71685822)x3 copy number gain not provided [RCV001258414] Chr8:71244655..71685822 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1330T>C (p.Ser444Pro) single nucleotide variant Inborn genetic diseases [RCV003241980] Chr8:70157035 [GRCh38]
Chr8:71069270 [GRCh37]
Chr8:8q13.3
uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771) copy number gain Polydactyly [RCV002280629] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8q13.2-13.3(chr8:69894553-72597645)x1 copy number loss not provided [RCV001827961] Chr8:69894553..72597645 [GRCh37]
Chr8:8q13.2-13.3
pathogenic
GRCh37/hg19 8q13.2-24.3(chr8:70382990-146295771) copy number gain not specified [RCV002053772] Chr8:70382990..146295771 [GRCh37]
Chr8:8q13.2-24.3
pathogenic
GRCh37/hg19 8q13.2-13.3(chr8:69899336-72597645) copy number loss not specified [RCV002053771] Chr8:69899336..72597645 [GRCh37]
Chr8:8q13.2-13.3
pathogenic
GRCh37/hg19 8q13.2-24.3(chr8:68912432-146295771)x2 copy number gain See cases [RCV002292707] Chr8:68912432..146295771 [GRCh37]
Chr8:8q13.2-24.3
pathogenic
NM_006540.4(NCOA2):c.1381A>G (p.Ser461Gly) single nucleotide variant Inborn genetic diseases [RCV003260541] Chr8:70156984 [GRCh38]
Chr8:71069219 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3066G>C (p.Gln1022His) single nucleotide variant Inborn genetic diseases [RCV002990770] Chr8:70138295 [GRCh38]
Chr8:71050530 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.4199G>T (p.Gly1400Val) single nucleotide variant Inborn genetic diseases [RCV002860488] Chr8:70123978 [GRCh38]
Chr8:71036213 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.2938A>G (p.Met980Val) single nucleotide variant Inborn genetic diseases [RCV002749983] Chr8:70141274 [GRCh38]
Chr8:71053509 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1718C>G (p.Pro573Arg) single nucleotide variant Inborn genetic diseases [RCV002777633] Chr8:70156647 [GRCh38]
Chr8:71068882 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1703A>G (p.Asn568Ser) single nucleotide variant Inborn genetic diseases [RCV002860737] Chr8:70156662 [GRCh38]
Chr8:71068897 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1151C>T (p.Pro384Leu) single nucleotide variant Inborn genetic diseases [RCV002793864] Chr8:70157214 [GRCh38]
Chr8:71069449 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3782G>A (p.Arg1261Gln) single nucleotide variant Inborn genetic diseases [RCV002688873] Chr8:70126947 [GRCh38]
Chr8:71039182 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.610G>A (p.Val204Ile) single nucleotide variant Inborn genetic diseases [RCV002840434] Chr8:70166686 [GRCh38]
Chr8:71078921 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.817C>G (p.Arg273Gly) single nucleotide variant Inborn genetic diseases [RCV002860286] Chr8:70163480 [GRCh38]
Chr8:71075715 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.2186C>A (p.Thr729Asn) single nucleotide variant Inborn genetic diseases [RCV002840013] Chr8:70156179 [GRCh38]
Chr8:71068414 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1891A>G (p.Arg631Gly) single nucleotide variant Inborn genetic diseases [RCV002884647] Chr8:70156474 [GRCh38]
Chr8:71068709 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.2876C>T (p.Ser959Leu) single nucleotide variant Inborn genetic diseases [RCV002762438] Chr8:70141336 [GRCh38]
Chr8:71053571 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3048G>A (p.Met1016Ile) single nucleotide variant Inborn genetic diseases [RCV002924823] Chr8:70138313 [GRCh38]
Chr8:71050548 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.4279A>G (p.Met1427Val) single nucleotide variant Inborn genetic diseases [RCV002737871] Chr8:70123898 [GRCh38]
Chr8:71036133 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.2327C>T (p.Ala776Val) single nucleotide variant Inborn genetic diseases [RCV002925795] Chr8:70156038 [GRCh38]
Chr8:71068273 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.587A>G (p.His196Arg) single nucleotide variant Inborn genetic diseases [RCV002821570] Chr8:70166709 [GRCh38]
Chr8:71078944 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1525C>T (p.Pro509Ser) single nucleotide variant Inborn genetic diseases [RCV002924192] Chr8:70156840 [GRCh38]
Chr8:71069075 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.2472C>A (p.Asp824Glu) single nucleotide variant Inborn genetic diseases [RCV002978843] Chr8:70148406 [GRCh38]
Chr8:71060641 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3389C>T (p.Ala1130Val) single nucleotide variant Inborn genetic diseases [RCV002760045] Chr8:70128916 [GRCh38]
Chr8:71041151 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.404A>G (p.Asn135Ser) single nucleotide variant Inborn genetic diseases [RCV002924425] Chr8:70170339 [GRCh38]
Chr8:71082574 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3164C>T (p.Pro1055Leu) single nucleotide variant Inborn genetic diseases [RCV002703711] Chr8:70131997 [GRCh38]
Chr8:71044232 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.2018C>G (p.Pro673Arg) single nucleotide variant Inborn genetic diseases [RCV002692218] Chr8:70156347 [GRCh38]
Chr8:71068582 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3506G>A (p.Arg1169His) single nucleotide variant Inborn genetic diseases [RCV002997958] Chr8:70128799 [GRCh38]
Chr8:71041034 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1478G>A (p.Ser493Asn) single nucleotide variant Inborn genetic diseases [RCV002893794] Chr8:70156887 [GRCh38]
Chr8:71069122 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1144A>G (p.Met382Val) single nucleotide variant Inborn genetic diseases [RCV002666393] Chr8:70157221 [GRCh38]
Chr8:71069456 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3370A>G (p.Ile1124Val) single nucleotide variant Inborn genetic diseases [RCV002892770] Chr8:70128935 [GRCh38]
Chr8:71041170 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1497C>A (p.Ser499Arg) single nucleotide variant Inborn genetic diseases [RCV002940671] Chr8:70156868 [GRCh38]
Chr8:71069103 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.100A>G (p.Thr34Ala) single nucleotide variant Inborn genetic diseases [RCV002672462] Chr8:70214062 [GRCh38]
Chr8:71126297 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.4354A>G (p.Met1452Val) single nucleotide variant Inborn genetic diseases [RCV002679253] Chr8:70121331 [GRCh38]
Chr8:71033566 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3104C>T (p.Pro1035Leu) single nucleotide variant Inborn genetic diseases [RCV002652423] Chr8:70138257 [GRCh38]
Chr8:71050492 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3039A>T (p.Glu1013Asp) single nucleotide variant Inborn genetic diseases [RCV003255390] Chr8:70138322 [GRCh38]
Chr8:71050557 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1037T>C (p.Leu346Pro) single nucleotide variant Inborn genetic diseases [RCV003218233] Chr8:70159592 [GRCh38]
Chr8:71071827 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1484G>C (p.Gly495Ala) single nucleotide variant Inborn genetic diseases [RCV003220948] Chr8:70156881 [GRCh38]
Chr8:71069116 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.1398A>T (p.Lys466Asn) single nucleotide variant Inborn genetic diseases [RCV003196731] Chr8:70156967 [GRCh38]
Chr8:71069202 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3262C>T (p.Arg1088Trp) single nucleotide variant Inborn genetic diseases [RCV003202760] Chr8:70131899 [GRCh38]
Chr8:71044134 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3958A>T (p.Thr1320Ser) single nucleotide variant Inborn genetic diseases [RCV003357806] Chr8:70124824 [GRCh38]
Chr8:71037059 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3874C>A (p.Pro1292Thr) single nucleotide variant Inborn genetic diseases [RCV003371730] Chr8:70126855 [GRCh38]
Chr8:71039090 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.657A>C (p.Glu219Asp) single nucleotide variant Inborn genetic diseases [RCV003365021] Chr8:70166639 [GRCh38]
Chr8:71078874 [GRCh37]
Chr8:8q13.3
uncertain significance
NM_006540.4(NCOA2):c.3002C>T (p.Thr1001Met) single nucleotide variant Inborn genetic diseases [RCV003341035] Chr8:70141210 [GRCh38]
Chr8:71053445 [GRCh37]
Chr8:8q13.3
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3849
Count of miRNA genes:1146
Interacting mature miRNAs:1430
Transcripts:ENST00000267974, ENST00000452400, ENST00000518287, ENST00000518363, ENST00000519724, ENST00000520416, ENST00000521239, ENST00000522054, ENST00000524223
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH91396  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,024,906 - 71,025,032UniSTSGRCh37
Build 36871,187,460 - 71,187,586RGDNCBI36
Celera867,022,574 - 67,022,700RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,518,205 - 66,518,331UniSTS
GeneMap99-GB4 RH Map8382.62UniSTS
RH123810  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,062,519 - 71,062,792UniSTSGRCh37
Build 36871,225,073 - 71,225,346RGDNCBI36
Celera867,060,200 - 67,060,473RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,555,832 - 66,556,105UniSTS
TNG Radiation Hybrid Map835824.0UniSTS
SHGC-142567  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,106,781 - 71,107,129UniSTSGRCh37
Build 36871,269,335 - 71,269,683RGDNCBI36
Celera867,104,476 - 67,104,823RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,600,193 - 66,600,541UniSTS
TNG Radiation Hybrid Map835841.0UniSTS
D8S2130  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,024,906 - 71,025,046UniSTSGRCh37
Build 36871,187,460 - 71,187,600RGDNCBI36
Celera867,022,574 - 67,022,714RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,518,205 - 66,518,345UniSTS
PMC170950P3  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,040,680 - 71,041,148UniSTSGRCh37
Build 36871,203,234 - 71,203,702RGDNCBI36
Celera867,038,349 - 67,038,817RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,533,978 - 66,534,446UniSTS
STS-X97674  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,025,627 - 71,025,874UniSTSGRCh37
Build 36871,188,181 - 71,188,428RGDNCBI36
Celera867,023,295 - 67,023,542RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,518,926 - 66,519,173UniSTS
GeneMap99-GB4 RH Map8374.18UniSTS
NCBI RH Map8852.9UniSTS
STS-H93122  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,101,441 - 71,101,652UniSTSGRCh37
Build 36871,263,995 - 71,264,206RGDNCBI36
Celera867,099,136 - 67,099,347RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,594,853 - 66,595,064UniSTS
GeneMap99-GB4 RH Map8371.67UniSTS
NCBI RH Map8833.0UniSTS
SHGC-58132  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,285,920 - 71,286,075UniSTSGRCh37
Build 36871,448,474 - 71,448,629RGDNCBI36
Celera867,283,600 - 67,283,755RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,779,225 - 66,779,380UniSTS
TNG Radiation Hybrid Map835886.0UniSTS
A006O24  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,079,214 - 71,079,354UniSTSGRCh37
Build 36871,241,768 - 71,241,908RGDNCBI36
Celera867,076,903 - 67,077,043RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,572,572 - 66,572,712UniSTS
GeneMap99-GB4 RH Map8374.87UniSTS
RH12853  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,079,294 - 71,079,435UniSTSGRCh37
Build 36871,241,848 - 71,241,989RGDNCBI36
Celera867,076,983 - 67,077,124RGD
Cytogenetic Map8q13.3UniSTS
HuRef866,572,652 - 66,572,793UniSTS
GeneMap99-GB4 RH Map8383.25UniSTS
NCOA2_3768  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37871,024,714 - 71,025,564UniSTSGRCh37
Build 36871,187,268 - 71,188,118RGDNCBI36
Celera867,022,382 - 67,023,232RGD
HuRef866,518,013 - 66,518,863UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 1389 1451 1244 373 1219 253 3208 707 1541 249 1309 1427 133 835 1856 4
Low 1044 1528 480 249 727 211 1147 1483 2170 168 139 181 38 369 932
Below cutoff 2 6 1 3 1 1 3 16 1 4 3 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001321703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001321707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001321711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001321712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001321713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC021558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC022730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC084251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC090731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI652063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL712418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW504723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC047111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC114383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB270668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK002637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK141607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK903771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN291204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CQ834204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA691975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF374064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT585085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LN607830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X97674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000452400   ⟹   ENSP00000399968
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,109,782 - 70,403,808 (-)Ensembl
RefSeq Acc Id: ENST00000518287   ⟹   ENSP00000430148
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,112,070 - 70,402,079 (-)Ensembl
RefSeq Acc Id: ENST00000518363   ⟹   ENSP00000429132
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,113,569 - 70,148,460 (-)Ensembl
RefSeq Acc Id: ENST00000519724   ⟹   ENSP00000430348
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,216,696 - 70,245,375 (-)Ensembl
RefSeq Acc Id: ENST00000520416   ⟹   ENSP00000430850
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,216,721 - 70,402,587 (-)Ensembl
RefSeq Acc Id: ENST00000521239
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,126,609 - 70,128,747 (-)Ensembl
RefSeq Acc Id: ENST00000522054
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,137,973 - 70,141,242 (-)Ensembl
RefSeq Acc Id: ENST00000524223
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,155,971 - 70,157,146 (-)Ensembl
RefSeq Acc Id: NM_001321703   ⟹   NP_001308632
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,404,217 (-)NCBI
CHM1_1871,077,538 - 71,372,108 (-)NCBI
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001321707   ⟹   NP_001308636
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
CHM1_1871,077,538 - 71,371,262 (-)NCBI
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001321711   ⟹   NP_001308640
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
CHM1_1871,077,538 - 71,371,710 (-)NCBI
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001321712   ⟹   NP_001308641
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
CHM1_1871,077,538 - 71,371,125 (-)NCBI
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001321713   ⟹   NP_001308642
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
CHM1_1871,077,538 - 71,371,125 (-)NCBI
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
Sequence:
RefSeq Acc Id: NM_006540   ⟹   NP_006531
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
GRCh37871,021,997 - 71,316,062 (-)NCBI
Build 36871,186,821 - 71,478,574 (-)NCBI Archive
HuRef866,517,566 - 66,809,329 (-)ENTREZGENE
CHM1_1871,077,538 - 71,371,710 (-)NCBI
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012961   ⟹   XP_016868450
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012962   ⟹   XP_016868451
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012963   ⟹   XP_016868452
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,404,217 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012964   ⟹   XP_016868453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,402,595 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012966   ⟹   XP_016868455
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012968   ⟹   XP_016868457
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012969   ⟹   XP_016868458
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,217,100 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012970   ⟹   XP_016868459
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,218,152 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012971   ⟹   XP_016868460
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,245,375 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017012972   ⟹   XP_016868461
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,213,969 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047421230   ⟹   XP_047277186
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421232   ⟹   XP_047277188
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,402,504 (-)NCBI
RefSeq Acc Id: XM_047421233   ⟹   XP_047277189
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,404,217 (-)NCBI
RefSeq Acc Id: XM_047421234   ⟹   XP_047277190
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,404,217 (-)NCBI
RefSeq Acc Id: XM_047421235   ⟹   XP_047277191
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,313,905 (-)NCBI
RefSeq Acc Id: XM_047421236   ⟹   XP_047277192
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421237   ⟹   XP_047277193
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421239   ⟹   XP_047277195
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,327,935 (-)NCBI
RefSeq Acc Id: XM_047421240   ⟹   XP_047277196
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,456,446 (-)NCBI
RefSeq Acc Id: XM_047421241   ⟹   XP_047277197
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
RefSeq Acc Id: XM_047421242   ⟹   XP_047277198
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,327,935 (-)NCBI
RefSeq Acc Id: XM_047421243   ⟹   XP_047277199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421244   ⟹   XP_047277200
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
RefSeq Acc Id: XM_047421245   ⟹   XP_047277201
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,402,595 (-)NCBI
RefSeq Acc Id: XM_047421246   ⟹   XP_047277202
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,299,051 (-)NCBI
RefSeq Acc Id: XM_047421247   ⟹   XP_047277203
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,404,217 (-)NCBI
RefSeq Acc Id: XM_047421248   ⟹   XP_047277204
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,217,100 (-)NCBI
RefSeq Acc Id: XM_047421249   ⟹   XP_047277205
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
RefSeq Acc Id: XM_047421250   ⟹   XP_047277206
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421251   ⟹   XP_047277207
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421252   ⟹   XP_047277208
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421253   ⟹   XP_047277209
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,245,375 (-)NCBI
RefSeq Acc Id: XM_047421254   ⟹   XP_047277210
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
RefSeq Acc Id: XM_047421255   ⟹   XP_047277211
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421256   ⟹   XP_047277212
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,404,217 (-)NCBI
RefSeq Acc Id: XM_047421257   ⟹   XP_047277213
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421258   ⟹   XP_047277214
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,404,217 (-)NCBI
RefSeq Acc Id: XM_047421259   ⟹   XP_047277215
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,390 (-)NCBI
RefSeq Acc Id: XM_047421260   ⟹   XP_047277216
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,402,595 (-)NCBI
RefSeq Acc Id: XM_047421261   ⟹   XP_047277217
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,403,808 (-)NCBI
RefSeq Acc Id: XM_047421262   ⟹   XP_047277218
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,404,217 (-)NCBI
RefSeq Acc Id: XM_047421263   ⟹   XP_047277219
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,217,100 (-)NCBI
RefSeq Acc Id: XM_047421264   ⟹   XP_047277220
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,109,782 - 70,245,375 (-)NCBI
RefSeq Acc Id: XM_054359547   ⟹   XP_054215522
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
RefSeq Acc Id: XM_054359548   ⟹   XP_054215523
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBI
RefSeq Acc Id: XM_054359549   ⟹   XP_054215524
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359550   ⟹   XP_054215525
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359551   ⟹   XP_054215526
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
RefSeq Acc Id: XM_054359552   ⟹   XP_054215527
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,832,431 (-)NCBI
RefSeq Acc Id: XM_054359553   ⟹   XP_054215528
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,647,961 (-)NCBI
RefSeq Acc Id: XM_054359554   ⟹   XP_054215529
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBI
RefSeq Acc Id: XM_054359555   ⟹   XP_054215530
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBI
RefSeq Acc Id: XM_054359556   ⟹   XP_054215531
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,743,827 (-)NCBI
RefSeq Acc Id: XM_054359557   ⟹   XP_054215532
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359558   ⟹   XP_054215533
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,832,522 (-)NCBI
RefSeq Acc Id: XM_054359559   ⟹   XP_054215534
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,686,335 (-)NCBI
RefSeq Acc Id: XM_054359560   ⟹   XP_054215535
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359561   ⟹   XP_054215536
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359562   ⟹   XP_054215537
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
RefSeq Acc Id: XM_054359563   ⟹   XP_054215538
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,654,688 (-)NCBI
RefSeq Acc Id: XM_054359564   ⟹   XP_054215539
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359565   ⟹   XP_054215540
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
RefSeq Acc Id: XM_054359566   ⟹   XP_054215541
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,832,522 (-)NCBI
RefSeq Acc Id: XM_054359567   ⟹   XP_054215542
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,728,973 (-)NCBI
RefSeq Acc Id: XM_054359568   ⟹   XP_054215543
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBI
RefSeq Acc Id: XM_054359569   ⟹   XP_054215544
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,647,958 (-)NCBI
RefSeq Acc Id: XM_054359570   ⟹   XP_054215545
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
RefSeq Acc Id: XM_054359571   ⟹   XP_054215546
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359572   ⟹   XP_054215547
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359573   ⟹   XP_054215548
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359574   ⟹   XP_054215549
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,686,333 (-)NCBI
RefSeq Acc Id: XM_054359575   ⟹   XP_054215550
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
RefSeq Acc Id: XM_054359576   ⟹   XP_054215551
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359577   ⟹   XP_054215552
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBI
RefSeq Acc Id: XM_054359578   ⟹   XP_054215553
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359579   ⟹   XP_054215554
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBI
RefSeq Acc Id: XM_054359580   ⟹   XP_054215555
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,317 (-)NCBI
RefSeq Acc Id: XM_054359581   ⟹   XP_054215556
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,832,522 (-)NCBI
RefSeq Acc Id: XM_054359582   ⟹   XP_054215557
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,833,735 (-)NCBI
RefSeq Acc Id: XM_054359583   ⟹   XP_054215558
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,834,144 (-)NCBI
RefSeq Acc Id: XM_054359584   ⟹   XP_054215559
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,647,959 (-)NCBI
RefSeq Acc Id: XM_054359585   ⟹   XP_054215560
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,686,333 (-)NCBI
RefSeq Acc Id: XM_054359586   ⟹   XP_054215561
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0870,539,621 - 70,643,879 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001308632 (Get FASTA)   NCBI Sequence Viewer  
  NP_001308636 (Get FASTA)   NCBI Sequence Viewer  
  NP_001308640 (Get FASTA)   NCBI Sequence Viewer  
  NP_001308641 (Get FASTA)   NCBI Sequence Viewer  
  NP_001308642 (Get FASTA)   NCBI Sequence Viewer  
  NP_006531 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868450 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868451 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868452 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868453 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868455 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868457 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868458 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868459 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868460 (Get FASTA)   NCBI Sequence Viewer  
  XP_016868461 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277186 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277188 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277189 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277190 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277191 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277192 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277193 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277195 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277196 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277197 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277198 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277199 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277200 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277201 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277202 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277203 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277204 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277205 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277206 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277207 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277208 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277209 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277210 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277211 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277212 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277213 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277214 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277215 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277216 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277217 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277218 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277219 (Get FASTA)   NCBI Sequence Viewer  
  XP_047277220 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215522 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215523 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215524 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215525 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215526 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215527 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215528 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215529 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215530 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215531 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215532 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215533 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215534 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215535 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215536 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215537 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215538 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215539 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215540 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215541 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215542 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215543 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215544 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215545 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215546 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215547 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215548 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215549 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215550 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215551 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215552 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215553 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215554 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215555 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215556 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215557 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215558 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215559 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215560 (Get FASTA)   NCBI Sequence Viewer  
  XP_054215561 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI14384 (Get FASTA)   NCBI Sequence Viewer  
  ABN46991 (Get FASTA)   NCBI Sequence Viewer  
  BAG60730 (Get FASTA)   NCBI Sequence Viewer  
  CAA66263 (Get FASTA)   NCBI Sequence Viewer  
  CAH05317 (Get FASTA)   NCBI Sequence Viewer  
  CEF49517 (Get FASTA)   NCBI Sequence Viewer  
  EAW86963 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000399968
  ENSP00000399968.2
  ENSP00000429132.2
  ENSP00000430148.2
  ENSP00000430348.1
  ENSP00000430850.1
GenBank Protein Q15596 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_006531   ⟸   NM_006540
- Peptide Label: isoform a
- UniProtKB: Q14CD2 (UniProtKB/Swiss-Prot),   Q15596 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001308632   ⟸   NM_001321703
- Peptide Label: isoform a
- UniProtKB: Q14CD2 (UniProtKB/Swiss-Prot),   Q15596 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001308640   ⟸   NM_001321711
- Peptide Label: isoform b
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   B4DPW8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001308636   ⟸   NM_001321707
- Peptide Label: isoform a
- UniProtKB: Q14CD2 (UniProtKB/Swiss-Prot),   Q15596 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001308642   ⟸   NM_001321713
- Peptide Label: isoform c
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001308641   ⟸   NM_001321712
- Peptide Label: isoform b
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   B4DPW8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016868452   ⟸   XM_017012963
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868455   ⟸   XM_017012966
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868450   ⟸   XM_017012961
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868457   ⟸   XM_017012968
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868451   ⟸   XM_017012962
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868453   ⟸   XM_017012964
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868460   ⟸   XM_017012971
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868459   ⟸   XM_017012970
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868458   ⟸   XM_017012969
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016868461   ⟸   XM_017012972
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: ENSP00000429132   ⟸   ENST00000518363
RefSeq Acc Id: ENSP00000430148   ⟸   ENST00000518287
RefSeq Acc Id: ENSP00000430348   ⟸   ENST00000519724
RefSeq Acc Id: ENSP00000399968   ⟸   ENST00000452400
RefSeq Acc Id: ENSP00000430850   ⟸   ENST00000520416
RefSeq Acc Id: XP_047277196   ⟸   XM_047421240
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277214   ⟸   XM_047421258
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047277212   ⟸   XM_047421256
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047277189   ⟸   XM_047421233
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277218   ⟸   XM_047421262
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047277203   ⟸   XM_047421247
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277190   ⟸   XM_047421234
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277210   ⟸   XM_047421254
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047277205   ⟸   XM_047421249
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277217   ⟸   XM_047421261
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047277200   ⟸   XM_047421244
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277197   ⟸   XM_047421241
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277215   ⟸   XM_047421259
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047277211   ⟸   XM_047421255
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047277186   ⟸   XM_047421230
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277193   ⟸   XM_047421237
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277207   ⟸   XM_047421251
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277213   ⟸   XM_047421257
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047277199   ⟸   XM_047421243
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277208   ⟸   XM_047421252
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277206   ⟸   XM_047421250
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277192   ⟸   XM_047421236
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277216   ⟸   XM_047421260
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047277201   ⟸   XM_047421245
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277188   ⟸   XM_047421232
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277195   ⟸   XM_047421239
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277198   ⟸   XM_047421242
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277191   ⟸   XM_047421235
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047277202   ⟸   XM_047421246
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277220   ⟸   XM_047421264
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047277209   ⟸   XM_047421253
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277219   ⟸   XM_047421263
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047277204   ⟸   XM_047421248
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215554   ⟸   XM_054359579
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054215552   ⟸   XM_054359577
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054215523   ⟸   XM_054359548
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215529   ⟸   XM_054359554
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215558   ⟸   XM_054359583
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054215543   ⟸   XM_054359568
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215530   ⟸   XM_054359555
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215550   ⟸   XM_054359575
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054215522   ⟸   XM_054359547
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215545   ⟸   XM_054359570
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215557   ⟸   XM_054359582
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054215540   ⟸   XM_054359565
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215526   ⟸   XM_054359551
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215537   ⟸   XM_054359562
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215555   ⟸   XM_054359580
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054215551   ⟸   XM_054359576
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054215525   ⟸   XM_054359550
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215536   ⟸   XM_054359561
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215547   ⟸   XM_054359572
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215535   ⟸   XM_054359560
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215553   ⟸   XM_054359578
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054215539   ⟸   XM_054359564
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215524   ⟸   XM_054359549
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215548   ⟸   XM_054359573
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215546   ⟸   XM_054359571
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215532   ⟸   XM_054359557
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215556   ⟸   XM_054359581
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054215541   ⟸   XM_054359566
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215533   ⟸   XM_054359558
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215527   ⟸   XM_054359552
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215531   ⟸   XM_054359556
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215542   ⟸   XM_054359567
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215534   ⟸   XM_054359559
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215560   ⟸   XM_054359585
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054215549   ⟸   XM_054359574
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215538   ⟸   XM_054359563
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215528   ⟸   XM_054359553
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054215559   ⟸   XM_054359584
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054215544   ⟸   XM_054359569
- Peptide Label: isoform X2
- UniProtKB: Q15596 (UniProtKB/Swiss-Prot),   Q14CD2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215561   ⟸   XM_054359586
- Peptide Label: isoform X5
Protein Domains
bHLH   DUF1518   DUF4927   PAS

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q15596-F1-model_v2 AlphaFold Q15596 1-1464 view protein structure

Promoters
RGD ID:7213487
Promoter ID:EPDNEW_H12489
Type:initiation region
Name:NCOA2_1
Description:nuclear receptor coactivator 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12490  EPDNEW_H12491  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,403,808 - 70,403,868EPDNEW
RGD ID:7213489
Promoter ID:EPDNEW_H12490
Type:initiation region
Name:NCOA2_2
Description:nuclear receptor coactivator 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12489  EPDNEW_H12491  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,404,217 - 70,404,277EPDNEW
RGD ID:7213495
Promoter ID:EPDNEW_H12491
Type:initiation region
Name:NCOA2_3
Description:nuclear receptor coactivator 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12489  EPDNEW_H12490  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38870,456,446 - 70,456,506EPDNEW
RGD ID:6814805
Promoter ID:HG_XEF:7991
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:NM_001087670,   NM_001142159,   NM_001161395,   NM_031822
Position:
Human AssemblyChrPosition (strand)Source
Build 36871,291,766 - 71,292,266 (-)MPROMDB
RGD ID:6806891
Promoter ID:HG_KWN:61483
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000267974,   NM_006540
Position:
Human AssemblyChrPosition (strand)Source
Build 36871,478,091 - 71,479,092 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:7669 AgrOrtholog
COSMIC NCOA2 COSMIC
Ensembl Genes ENSG00000140396 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000452400 ENTREZGENE
  ENST00000452400.7 UniProtKB/Swiss-Prot
  ENST00000518287.6 UniProtKB/TrEMBL
  ENST00000518363.2 UniProtKB/TrEMBL
  ENST00000519724.1 UniProtKB/TrEMBL
  ENST00000520416.1 UniProtKB/TrEMBL
Gene3D-CATH 4.10.280.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.10.140.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000140396 GTEx
HGNC ID HGNC:7669 ENTREZGENE
Human Proteome Map NCOA2 Human Proteome Map
InterPro bHLH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF1518 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4927 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NCOA2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuc_rcpt_coact UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuc_rcpt_coact_Ncoa-typ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuc_rcpt_coact_Ncoa_int_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_rcpt_coactivator UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRC/p160_LXXLL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:10499 UniProtKB/Swiss-Prot
NCBI Gene 10499 ENTREZGENE
OMIM 601993 OMIM
PANTHER PTHR10684 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10684:SF2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF1518 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4927 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NCOA_u2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuc_rec_co-act UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS_11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRC-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA31471 PharmGKB
PIRSF Nuclear_receptor_coactivator UniProtKB/Swiss-Prot
PROSITE BHLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DUF1518 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47459 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF55785 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF69125 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0B6XJZ8_HUMAN UniProtKB/TrEMBL
  A0A1D5RMT0_HUMAN UniProtKB/TrEMBL
  B4DPW8 ENTREZGENE, UniProtKB/TrEMBL
  E5RFN9_HUMAN UniProtKB/TrEMBL
  E7EWM1_HUMAN UniProtKB/TrEMBL
  H0YBB6_HUMAN UniProtKB/TrEMBL
  NCOA2_HUMAN UniProtKB/Swiss-Prot
  Q14CD2 ENTREZGENE
  Q15596 ENTREZGENE
  Q569J4_HUMAN UniProtKB/TrEMBL
UniProt Secondary Q14CD2 UniProtKB/Swiss-Prot