BACH2 (BTB domain and CNC homolog 2) - Rat Genome Database

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Gene: BACH2 (BTB domain and CNC homolog 2) Homo sapiens
Analyze
Symbol: BACH2
Name: BTB domain and CNC homolog 2
RGD ID: 1319503
HGNC Page HGNC:14078
Description: Enables sequence-specific double-stranded DNA binding activity. Involved in primary adaptive immune response involving T cells and B cells. Located in cytosol and nucleoplasm. Part of RNA polymerase II transcription regulator complex. Implicated in immunodeficiency 60.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BTB and CNC homolog 2; BTB and CNC homology 1, basic leucine zipper transcription factor 2; BTBD25; IMD60; transcription regulator protein BACH2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38689,926,528 - 90,296,843 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl689,926,528 - 90,296,843 (-)EnsemblGRCh38hg38GRCh38
GRCh37690,636,247 - 91,006,562 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36690,692,969 - 91,063,182 (-)NCBINCBI36Build 36hg18NCBI36
Build 34690,692,968 - 91,063,182NCBI
Celera691,056,791 - 91,427,144 (-)NCBICelera
Cytogenetic Map6q15NCBI
HuRef687,855,580 - 88,225,476 (-)NCBIHuRef
CHM1_1690,733,911 - 91,104,124 (-)NCBICHM1_1
T2T-CHM13v2.0691,138,217 - 91,508,429 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
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Original Reference(s)
BACH2Humanimmunodeficiency 60  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
BACH2Humanimmunodeficiency 60  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Immunodeficiency 60ClinVarPMID:25741868
BACH2Humanimmunodeficiency 60  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
BACH2Humanimmunodeficiency 60  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Immunodeficiency 60ClinVarPMID:28492532 and PMID:28530713
BACH2Humanimmunodeficiency 60  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Immunodeficiency 60ClinVar 
BACH2Humanimmunodeficiency 60  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Immunodeficiency 60ClinVarPMID:28530713
BACH2Humanprimary ciliary dyskinesia 3  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Primary ciliary dyskinesia 3ClinVarPMID:28492532
Object Symbol
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Original Reference(s)
BACH2Humanacute myeloid leukemia  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:21441929
BACH2Humanceliac disease  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:20190752
BACH2HumanCrohn's disease  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:21102463
BACH2Humantype 1 diabetes mellitus  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:18978792
BACH2Humanvitiligo  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:22561518
Object Symbol
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Original Reference(s)
BACH2Humanimmunodeficiency 60  IAGP 7240710 OMIM 

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Original Reference(s)
BACH2Human(-)-anisomycin increases expressionEXP 6480464Anisomycin results in increased expression of BACH2 mRNACTDPMID:24247028
BACH2Human1,1-dichloroethene decreases expressionISOBach2 (Mus musculus)6480464vinylidene chloride results in decreased expression of BACH2 mRNACTDPMID:26682919
BACH2Human17alpha-ethynylestradiol increases expressionISOBach2 (Rattus norvegicus)6480464Ethinyl Estradiol results in increased expression of BACH2 mRNACTDPMID:29097150
BACH2Human17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with TGFB1 protein] results in increased expression of BACH2 mRNACTDPMID:30165855
BACH2Human17beta-estradiol increases expressionISOBach2 (Rattus norvegicus)6480464Estradiol results in increased expression of BACH2 mRNACTDPMID:32145629
BACH2Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOBach2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of BACH2 mRNACTDPMID:20819909 more ...
BACH2Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOBach2 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of BACH2 mRNACTDPMID:33387578
BACH2Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOBach2 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of BACH2 mRNACTDPMID:32109520
BACH2Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOBach2 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of BACH2 mRNACTDPMID:21570461
BACH2Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOBach2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of BACH2 mRNACTDPMID:19770486
BACH2Human2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOBach2 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Lipopolysaccharides] promotes the reaction [BACH2 protein binds to PRDM1 intron] more ...CTDPMID:19654925 more ...
BACH2Human2,3,7,8-Tetrachlorodibenzofuran decreases expressionISOBach2 (Rattus norvegicus)64804642 more ...CTDPMID:32109520
BACH2Human2-butoxyethanol decreases expressionISOBach2 (Mus musculus)6480464n-butoxyethanol results in decreased expression of BACH2 mRNACTDPMID:19812364
BACH2Human3,3',4,4',5-pentachlorobiphenyl decreases expressionISOBach2 (Rattus norvegicus)64804643 more ...CTDPMID:32119087
BACH2Human3,4-methylenedioxymethamphetamine decreases expressionISOBach2 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of BACH2 mRNACTDPMID:20188158
BACH2Human4,4'-sulfonyldiphenol decreases expressionEXP 6480464bisphenol S results in decreased expression of BACH2 mRNACTDPMID:30616060
BACH2Human6-propyl-2-thiouracil increases expressionISOBach2 (Rattus norvegicus)6480464Propylthiouracil results in increased expression of BACH2 mRNACTDPMID:24780913 and PMID:25825206
BACH2Humanaflatoxin B1 decreases expressionISOBach2 (Mus musculus)6480464Aflatoxin B1 results in decreased expression of BACH2 mRNACTDPMID:19770486
BACH2Humanaflatoxin B1 increases methylationEXP 6480464Aflatoxin B1 results in increased methylation of BACH2 geneCTDPMID:27153756
BACH2Humanalpha-Zearalanol increases expressionISOBach2 (Rattus norvegicus)6480464Zeranol results in increased expression of BACH2 mRNACTDPMID:35163327

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Biological Process
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Original Reference(s)
BACH2Humanimport into nucleus involved_inIEAUniProtKB:P97303 and ensembl:ENSMUSP00000103815150520179 EnsemblGO_REF:0000107
BACH2Humanimport into nucleus involved_inISSUniProtKB:P97303150520179 UniProtGO_REF:0000024
BACH2Humannegative regulation of transcription by RNA polymerase II involved_inIEAUniProtKB:P97303 and ensembl:ENSMUSP00000103815150520179 EnsemblGO_REF:0000107
BACH2Humannegative regulation of transcription by RNA polymerase II involved_inNAS 150520179 PMID:27052415ComplexPortalPMID:27052415
BACH2Humanprimary adaptive immune response involving T cells and B cells involved_inIMP 150520179 PMID:28530713UniProtPMID:28530713
BACH2Humanregulation of DNA-templated transcription involved_inIEAInterPro:IPR004826 more ...150520179 InterProGO_REF:0000002
BACH2Humanregulation of DNA-templated transcription acts_upstream_of_or_withinIEAUniProtKB:P97303 and ensembl:ENSMUSP00000103815150520179 EnsemblGO_REF:0000107
BACH2Humanregulation of gene expression involved_inIEAARBA:ARBA00028334150520179 UniProtGO_REF:0000117
BACH2Humanregulation of primary metabolic process involved_inIEAARBA:ARBA00026284150520179 UniProtGO_REF:0000117
BACH2Humanregulation of transcription by RNA polymerase II involved_inIEAInterPro:IPR047167150520179 InterProGO_REF:0000002
BACH2Humanregulation of transcription by RNA polymerase II involved_inNAS 150520179 PMID:23661758ComplexPortalPMID:23661758
BACH2Humanregulation of transcription by RNA polymerase II involved_inIBAMGI:102755 more ...150520179 GO_CentralGO_REF:0000033
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Cellular Component
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Original Reference(s)
BACH2Humanchromatin located_inISAtfclass:1.1.1150520179 NTNU_SBGO_REF:0000113
BACH2Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
BACH2Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
BACH2Humancytosol located_inIDA 150520179 HPAGO_REF:0000052
BACH2Humannucleoplasm located_inIDA 150520179 HPAGO_REF:0000052
BACH2Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
BACH2Humannucleus located_inNAS 150520179 PMID:23661758 and PMID:27052415ComplexPortalPMID:23661758 and PMID:27052415
BACH2Humannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
BACH2Humannucleus located_inIEAUniProtKB:P97303 and ensembl:ENSMUSP00000103815150520179 EnsemblGO_REF:0000107
BACH2HumanRNA polymerase II transcription regulator complex part_ofIPI 150520179 PMID:22194330 and PMID:23661758ComplexPortalPMID:22194330 and PMID:23661758
BACH2HumanRNA polymerase II transcription regulator complex part_ofISSComplexPortal:CPX-2485150520179 ComplexPortalGO_REF:0000114
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Molecular Function
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Original Reference(s)
BACH2HumanDNA binding enablesIEAUniProtKB:P97303 and ensembl:ENSMUSP00000103815150520179 EnsemblGO_REF:0000107
BACH2HumanDNA binding enablesIEAInterPro:IPR004826 and InterPro:IPR008917150520179 InterProGO_REF:0000002
BACH2HumanDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
BACH2HumanDNA-binding transcription factor activity enablesIEAInterPro:IPR004827 more ...150520179 InterProGO_REF:0000002
BACH2HumanDNA-binding transcription factor activity enablesIEAUniProtKB:P97303 and ensembl:ENSMUSP00000103815150520179 EnsemblGO_REF:0000107
BACH2HumanDNA-binding transcription factor activity, RNA polymerase II-specific enablesISAtfclass:1.1.1150520179 NTNU_SBGO_REF:0000113
BACH2HumanDNA-binding transcription factor activity, RNA polymerase II-specific enablesIBAMGI:102755 more ...150520179 GO_CentralGO_REF:0000033
BACH2HumanDNA-binding transcription repressor activity, RNA polymerase II-specific enablesIEAUniProtKB:P97303 and ensembl:ENSMUSP00000103815150520179 EnsemblGO_REF:0000107
BACH2Humanprotein binding enablesIPIUniProtKB:O15525 more ...150520179 PMID:33961781IntActPMID:33961781
BACH2Humanprotein binding enablesIPIUniProtKB:O75386 more ...150520179 PMID:28514442IntActPMID:28514442
BACH2Humanprotein binding enablesIPIUniProtKB:O15525 more ...150520179 PMID:32296183IntActPMID:32296183
BACH2Humanprotein binding enablesIPIUniProtKB:O15525 more ...150520179 PMID:23661758IntActPMID:23661758
BACH2HumanRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesIEAInterPro:IPR047167150520179 InterProGO_REF:0000002
BACH2HumanRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesIBAMGI:102755 more ...150520179 GO_CentralGO_REF:0000033
BACH2HumanRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesIEAUniProtKB:P97303 and ensembl:ENSMUSP00000103815150520179 EnsemblGO_REF:0000107
BACH2Humansequence-specific double-stranded DNA binding enablesIDA 150520179 PMID:28473536ARUK-UCLPMID:28473536
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#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
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PMID:8887638   PMID:10669750   PMID:10809773   PMID:10949928   PMID:11746976   PMID:11923289   PMID:12477932   PMID:12829606   PMID:14574404   PMID:14982850   PMID:15060166   PMID:15146197  
PMID:16344560   PMID:16832351   PMID:17018862   PMID:17044046   PMID:17262715   PMID:17383980   PMID:17620599   PMID:17991429   PMID:18256039   PMID:18769450   PMID:18840781   PMID:18929412  
PMID:18978792   PMID:19073967   PMID:19274049   PMID:19430480   PMID:20125193   PMID:20190752   PMID:20203524   PMID:20379614   PMID:20647273   PMID:21102463   PMID:21145461   PMID:21412927  
PMID:21829393   PMID:21833088   PMID:21841780   PMID:21873635   PMID:22194330   PMID:22561518   PMID:22589738   PMID:22858985   PMID:22899287   PMID:23128233   PMID:23251661   PMID:23273568  
PMID:23382691   PMID:23661758   PMID:23852341   PMID:23865571   PMID:23936317   PMID:24022229   PMID:24075570   PMID:24346624   PMID:24450488   PMID:24586183   PMID:24608439   PMID:24858026  
PMID:24968937   PMID:24999842   PMID:25011556   PMID:25013050   PMID:25444856   PMID:25670004   PMID:25873652   PMID:26186194   PMID:26444573   PMID:26969735   PMID:27052415   PMID:27206783  
PMID:27680876   PMID:28030830   PMID:28256087   PMID:28473536   PMID:28514442   PMID:28530713   PMID:28592433   PMID:28718761   PMID:28887441   PMID:29129929   PMID:29452228   PMID:29459360  
PMID:29529253   PMID:29991969   PMID:30250186   PMID:30654767   PMID:30970177   PMID:31501353   PMID:31753913   PMID:31808546   PMID:32082072   PMID:32236312   PMID:32296183   PMID:32892482  
PMID:33187986   PMID:33316352   PMID:33393145   PMID:33447883   PMID:33875646   PMID:33903979   PMID:33961781   PMID:33966174   PMID:34907913   PMID:35016035   PMID:35264460   PMID:35544467  
PMID:35563538   PMID:36178457   PMID:36573315   PMID:36781170   PMID:37532764   PMID:38459508   PMID:38580884   PMID:38824974   PMID:38901430   PMID:39009838  
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BACH2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38689,926,528 - 90,296,843 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl689,926,528 - 90,296,843 (-)EnsemblGRCh38hg38GRCh38
GRCh37690,636,247 - 91,006,562 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36690,692,969 - 91,063,182 (-)NCBINCBI36Build 36hg18NCBI36
Build 34690,692,968 - 91,063,182NCBI
Celera691,056,791 - 91,427,144 (-)NCBICelera
Cytogenetic Map6q15NCBI
HuRef687,855,580 - 88,225,476 (-)NCBIHuRef
CHM1_1690,733,911 - 91,104,124 (-)NCBICHM1_1
T2T-CHM13v2.0691,138,217 - 91,508,429 (-)NCBIT2T-CHM13v2.0
Bach2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39432,238,413 - 32,586,109 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl432,238,804 - 32,586,108 (+)EnsemblGRCm39 Ensembl
GRCm38432,238,413 - 32,586,109 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl432,238,804 - 32,586,108 (+)EnsemblGRCm38mm10GRCm38
MGSCv37432,504,410 - 32,673,083 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36432,567,563 - 32,909,812 (+)NCBIMGSCv36mm8
Celera432,164,289 - 32,333,354 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map414.02NCBI
Bach2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8551,428,802 - 51,779,030 (+)NCBIGRCr8
mRatBN7.2546,632,338 - 46,982,676 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl546,638,317 - 46,977,877 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx548,859,726 - 49,119,822 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0550,458,890 - 50,718,988 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0550,402,412 - 50,664,315 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0547,458,891 - 47,807,176 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl547,546,014 - 47,807,166 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0552,073,295 - 52,410,910 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4548,611,805 - 48,881,943 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera545,479,904 - 45,738,863 (+)NCBICelera
Cytogenetic Map5q21NCBI
Bach2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541116,613,397 - 16,877,834 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541116,607,546 - 16,947,359 (-)NCBIChiLan1.0ChiLan1.0
BACH2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25110,011,721 - 110,381,491 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16107,912,858 - 108,282,578 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0687,806,188 - 88,175,840 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1691,081,381 - 91,212,497 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl691,083,533 - 91,160,552 (-)Ensemblpanpan1.1panPan2
BACH2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11249,101,621 - 49,375,415 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1249,106,523 - 49,460,286 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1248,908,403 - 49,267,597 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01249,910,921 - 50,270,587 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1249,916,822 - 50,270,719 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11249,225,818 - 49,503,613 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01249,126,581 - 49,485,448 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01249,318,946 - 49,677,611 (-)NCBIUU_Cfam_GSD_1.0
Bach2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494684,094,552 - 84,429,900 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365102,299,831 - 2,371,544 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365102,041,004 - 2,375,215 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BACH2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl157,899,808 - 58,281,430 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1157,881,203 - 58,281,740 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2164,904,041 - 65,200,342 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BACH2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11314,681,323 - 15,049,690 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1314,687,188 - 14,763,706 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040191,077,385 - 191,445,395 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bach2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247993,984,546 - 4,256,898 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247993,893,548 - 4,262,344 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in BACH2
483 total Variants

1 to 10 of 547 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 6q14.1-16.1(chr6:82569098-93753476)x1 copy number loss See cases [RCV000052192] Chr6:82569098..93753476 [GRCh38]
Chr6:83278815..94463194 [GRCh37]
Chr6:83335534..94519915 [NCBI36]
Chr6:6q14.1-16.1		 pathogenic
NM_021813.4(BACH2):c.1044G>A (p.Thr348=) single nucleotide variant not provided [RCV002216368] Chr6:89951062 [GRCh38]
Chr6:90660781 [GRCh37]
Chr6:90717502 [NCBI36]
Chr6:6q15		 likely benign|not provided
NM_001170794.1(BACH2):c.1852C>T (p.Pro618Ser) single nucleotide variant Malignant melanoma [RCV000061500] Chr6:89938335 [GRCh38]
Chr6:90648054 [GRCh37]
Chr6:90704775 [NCBI36]
Chr6:6q15		 not provided
NM_001170794.1(BACH2):c.-161-15474G>T single nucleotide variant Lung cancer [RCV000097256] Chr6:90104583 [GRCh38]
Chr6:90814302 [GRCh37]
Chr6:6q15		 uncertain significance
NM_001170794.1(BACH2):c.-162+48427G>T single nucleotide variant Lung cancer [RCV000097257] Chr6:90158142 [GRCh38]
Chr6:90867861 [GRCh37]
Chr6:6q15		 uncertain significance
NM_021813.4(BACH2):c.1102C>T (p.Pro368Ser) single nucleotide variant Immunodeficiency 60 [RCV001332410]|not provided [RCV002546559] Chr6:89951004 [GRCh38]
Chr6:90660723 [GRCh37]
Chr6:6q15		 uncertain significance
GRCh38/hg38 6q15(chr6:89931798-91707636)x3 copy number gain See cases [RCV000134297] Chr6:89931798..91707636 [GRCh38]
Chr6:90641517..92417354 [GRCh37]
Chr6:90698238..92474075 [NCBI36]
Chr6:6q15		 uncertain significance
GRCh38/hg38 6q14.2-16.1(chr6:83838303-98822313)x1 copy number loss See cases [RCV000135773] Chr6:83838303..98822313 [GRCh38]
Chr6:84548022..99270189 [GRCh37]
Chr6:84604741..99376910 [NCBI36]
Chr6:6q14.2-16.1		 pathogenic
GRCh38/hg38 6q14.3-16.1(chr6:85804273-93189258)x1 copy number loss See cases [RCV000135450] Chr6:85804273..93189258 [GRCh38]
Chr6:86513991..93898976 [GRCh37]
Chr6:86570710..93955697 [NCBI36]
Chr6:6q14.3-16.1		 pathogenic
GRCh38/hg38 6q14.3-15(chr6:85370716-90669793)x1 copy number loss See cases [RCV000136757] Chr6:85370716..90669793 [GRCh38]
Chr6:86080434..91379512 [GRCh37]
Chr6:86137153..91436233 [NCBI36]
Chr6:6q14.3-15		 pathogenic
1 to 10 of 547 rows

Predicted Target Of
Summary Value
Count of predictions:7385
Count of miRNA genes:1320
Interacting mature miRNAs:1693
Transcripts:ENST00000257749, ENST00000343122, ENST00000406998, ENST00000453877, ENST00000470301, ENST00000472023, ENST00000481150, ENST00000493201, ENST00000494747, ENST00000537989
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 248 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597208987GWAS1305061_Hblood protein measurement QTL GWAS1305061 (human)2e-13blood protein amount (VT:0005416)blood protein measurement (CMO:0000028)69026704990267050Human
597208991GWAS1305065_Hblood protein measurement QTL GWAS1305065 (human)3e-10blood protein amount (VT:0005416)blood protein measurement (CMO:0000028)69025923090259231Human
597613974GWAS1670834_Hasthma QTL GWAS1670834 (human)2e-11asthma69027815390278154Human
407006280GWAS655256_Hlymphocyte count QTL GWAS655256 (human)4e-41lymphocyte countblood lymphocyte count (CMO:0000031)69026704990267050Human
597050781GWAS1146855_Hhypothyroidism QTL GWAS1146855 (human)2e-39hypothyroidism69027940690279407Human
407128149GWAS777125_Htype 1 diabetes mellitus QTL GWAS777125 (human)5e-12type 1 diabetes mellitus69024851290248513Human
406970963GWAS619939_Hbasophil count, eosinophil count QTL GWAS619939 (human)1e-28eosinophil quantity (VT:0002602)blood granulocyte count (CMO:0000111)69023511290235113Human
597162885GWAS1258959_Hchildhood onset asthma QTL GWAS1258959 (human)1e-20childhood onset asthma69025389590253896Human
597090178GWAS1186252_Hmonocyte percentage of leukocytes QTL GWAS1186252 (human)5e-31monocyte quantity (VT:0000223)blood monocyte count to total leukocyte count ratio (CMO:0000374)69022566490225665Human
407045716GWAS694692_Hmetabolic rate measurement QTL GWAS694692 (human)0.000003metabolic rate measurementmetabolic rate (CMO:0003956)68997174789971748Human

1 to 10 of 248 rows
D6S462  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,928,591 - 90,928,875UniSTSGRCh37
GRCh37690,928,586 - 90,928,727UniSTSGRCh37
Build 36690,985,312 - 90,985,596RGDNCBI36
Celera691,349,110 - 91,349,394RGD
Celera691,349,105 - 91,349,246UniSTS
Cytogenetic Map6q15UniSTS
HuRef688,147,758 - 88,148,042UniSTS
HuRef688,147,753 - 88,147,894UniSTS
Marshfield Genetic Map699.01UniSTS
Marshfield Genetic Map699.01RGD
Genethon Genetic Map699.0UniSTS
TNG Radiation Hybrid Map644205.0UniSTS
Whitehead-YAC Contig Map6 UniSTS
GeneMap99-G3 RH Map64228.0UniSTS
G17078  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,690,750 - 90,690,855UniSTSGRCh37
Build 36690,747,471 - 90,747,576RGDNCBI36
Celera691,111,277 - 91,111,382RGD
Cytogenetic Map6q15UniSTS
HuRef687,909,904 - 87,910,009UniSTS
A008R03  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,637,962 - 90,638,155UniSTSGRCh37
Build 36690,694,683 - 90,694,876RGDNCBI36
Celera691,058,506 - 91,058,699RGD
Cytogenetic Map6q15UniSTS
HuRef687,857,295 - 87,857,488UniSTS
GeneMap99-GB4 RH Map6395.78UniSTS
RH37451  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,808,894 - 90,809,079UniSTSGRCh37
Build 36690,865,615 - 90,865,800RGDNCBI36
Celera691,229,419 - 91,229,604RGD
Cytogenetic Map6q15UniSTS
HuRef688,028,077 - 88,028,262UniSTS
GeneMap99-GB4 RH Map6397.45UniSTS
SGC34793  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,711,096 - 90,711,238UniSTSGRCh37
Build 36690,767,817 - 90,767,959RGDNCBI36
Celera691,131,620 - 91,131,762RGD
Cytogenetic Map6q15UniSTS
HuRef687,930,254 - 87,930,396UniSTS
GeneMap99-GB4 RH Map6386.33UniSTS
Whitehead-RH Map6596.7UniSTS
RH103117  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,636,278 - 90,636,475UniSTSGRCh37
Build 36690,692,999 - 90,693,196RGDNCBI36
Celera691,056,822 - 91,057,019RGD
Cytogenetic Map6q15UniSTS
HuRef687,855,611 - 87,855,808UniSTS
GeneMap99-GB4 RH Map6395.89UniSTS
RH104070  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,960,083 - 90,960,210UniSTSGRCh37
Build 36691,016,804 - 91,016,931RGDNCBI36
Celera691,380,600 - 91,380,727RGD
Cytogenetic Map6q15UniSTS
HuRef688,179,245 - 88,179,372UniSTS
GeneMap99-GB4 RH Map6410.13UniSTS
RH119295  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,795,062 - 90,795,343UniSTSGRCh37
Build 36690,851,783 - 90,852,064RGDNCBI36
Celera691,215,582 - 91,215,863RGD
Cytogenetic Map6q15UniSTS
HuRef688,014,225 - 88,014,506UniSTS
RH123573  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,947,404 - 90,947,710UniSTSGRCh37
Build 36691,004,125 - 91,004,431RGDNCBI36
Celera691,367,921 - 91,368,227RGD
Cytogenetic Map6q15UniSTS
HuRef688,166,566 - 88,166,872UniSTS
TNG Radiation Hybrid Map644230.0UniSTS
RH123580  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37691,003,360 - 91,003,645UniSTSGRCh37
Build 36691,060,081 - 91,060,366RGDNCBI36
Celera691,423,877 - 91,424,162RGD
Cytogenetic Map6q15UniSTS
HuRef688,222,521 - 88,222,806UniSTS
TNG Radiation Hybrid Map644252.0UniSTS
D6S366  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,812,441 - 90,812,593UniSTSGRCh37
Build 36690,869,162 - 90,869,314RGDNCBI36
Celera691,232,968 - 91,233,114RGD
Cytogenetic Map6q15UniSTS
HuRef688,031,624 - 88,031,770UniSTS
D6S1351  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,758,156 - 90,758,264UniSTSGRCh37
Build 36690,814,877 - 90,814,985RGDNCBI36
Celera691,178,676 - 91,178,784RGD
Cytogenetic Map6q15UniSTS
HuRef687,977,320 - 87,977,428UniSTS
SHGC-146246  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,643,981 - 90,644,096UniSTSGRCh37
Build 36690,700,702 - 90,700,817RGDNCBI36
Celera691,064,520 - 91,064,635RGD
Cytogenetic Map6q15UniSTS
HuRef687,863,310 - 87,863,425UniSTS
G17026  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,748,783 - 90,748,923UniSTSGRCh37
Build 36690,805,504 - 90,805,644RGDNCBI36
Celera691,169,303 - 91,169,443RGD
Cytogenetic Map6q15UniSTS
HuRef687,967,937 - 87,968,077UniSTS
SHGC-34604  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,907,381 - 90,907,505UniSTSGRCh37
Build 36690,964,102 - 90,964,226RGDNCBI36
Celera691,327,901 - 91,328,025RGD
Cytogenetic Map6q15UniSTS
HuRef688,126,549 - 88,126,673UniSTS
Stanford-G3 RH Map63922.0UniSTS
GeneMap99-GB4 RH Map6412.67UniSTS
Whitehead-RH Map6599.2UniSTS
NCBI RH Map61282.0UniSTS
GeneMap99-G3 RH Map64228.0UniSTS
D6S1506  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,804,156 - 90,804,305UniSTSGRCh37
Build 36690,860,877 - 90,861,026RGDNCBI36
Celera691,224,679 - 91,224,828RGD
Cytogenetic Map6q15UniSTS
HuRef688,023,340 - 88,023,489UniSTS
Whitehead-RH Map6568.5UniSTS
Whitehead-YAC Contig Map6 UniSTS
A009Y20  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,907,243 - 90,907,426UniSTSGRCh37
Build 36690,963,964 - 90,964,147RGDNCBI36
Celera691,327,763 - 91,327,946RGD
Cytogenetic Map6q15UniSTS
HuRef688,126,411 - 88,126,594UniSTS
GeneMap99-GB4 RH Map6397.55UniSTS
RH16500  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,907,282 - 90,907,421UniSTSGRCh37
Build 36690,964,003 - 90,964,142RGDNCBI36
Celera691,327,802 - 91,327,941RGD
Cytogenetic Map6q15UniSTS
HuRef688,126,450 - 88,126,589UniSTS
GeneMap99-GB4 RH Map6397.45UniSTS
RH65350  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,846,729 - 90,846,860UniSTSGRCh37
Build 36690,903,450 - 90,903,581RGDNCBI36
Celera691,267,251 - 91,267,382RGD
Cytogenetic Map6q15UniSTS
HuRef688,065,899 - 88,066,030UniSTS
GeneMap99-GB4 RH Map6397.55UniSTS
BACH2_4426  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,636,238 - 90,637,089UniSTSGRCh37
Build 36690,692,959 - 90,693,810RGDNCBI36
Celera691,056,782 - 91,057,633RGD
HuRef687,855,571 - 87,856,422UniSTS
G32982  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37690,907,243 - 90,907,426UniSTSGRCh37
Celera691,327,763 - 91,327,946UniSTS
Cytogenetic Map6q15UniSTS
HuRef688,126,411 - 88,126,594UniSTS
D6S462  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6q15UniSTS
TNG Radiation Hybrid Map644205.0UniSTS
GeneMap99-G3 RH Map64228.0UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2378 2788 2245 4942 1716 2331 4 616 1851 458 2265 7128 6353 44 3711 831 1723 1605 171 1


1 to 30 of 45 rows
RefSeq Transcripts NM_001170794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_021813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005248758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005248759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011536039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011536040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017011166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017011167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024446510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024446511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024446513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA885077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB208889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF357835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI524722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ271878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL117342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL121787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL121941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL158136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL159164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL353692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL512739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN261405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB077323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB240991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 45 rows

Ensembl Acc Id: ENST00000257749   ⟹   ENSP00000257749
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,926,528 - 90,296,843 (-)Ensembl
Ensembl Acc Id: ENST00000343122   ⟹   ENSP00000345642
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,931,485 - 90,296,742 (-)Ensembl
Ensembl Acc Id: ENST00000406998   ⟹   ENSP00000384145
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,931,424 - 90,296,742 (-)Ensembl
Ensembl Acc Id: ENST00000453877   ⟹   ENSP00000397668
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,932,408 - 90,296,742 (-)Ensembl
Ensembl Acc Id: ENST00000470301
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl690,088,958 - 90,296,742 (-)Ensembl
Ensembl Acc Id: ENST00000472023
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl690,089,066 - 90,296,742 (-)Ensembl
Ensembl Acc Id: ENST00000481150
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl690,008,090 - 90,008,827 (-)Ensembl
Ensembl Acc Id: ENST00000493201
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl690,089,054 - 90,218,245 (-)Ensembl
Ensembl Acc Id: ENST00000494747
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl690,104,365 - 90,296,742 (-)Ensembl
Ensembl Acc Id: ENST00000537989   ⟹   ENSP00000437473
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,926,529 - 90,296,908 (-)Ensembl
Ensembl Acc Id: ENST00000695952   ⟹   ENSP00000512284
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,932,408 - 90,206,689 (-)Ensembl
Ensembl Acc Id: ENST00000695953
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,950,156 - 90,296,747 (-)Ensembl
Ensembl Acc Id: ENST00000695954
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,975,550 - 90,062,963 (-)Ensembl
Ensembl Acc Id: ENST00000695955
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl690,172,683 - 90,219,750 (-)Ensembl
RefSeq Acc Id: NM_001170794   ⟹   NP_001164265
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38689,926,528 - 90,296,843 (-)NCBI
GRCh37690,636,247 - 91,006,627 (-)NCBI
HuRef687,855,580 - 88,225,476 (-)ENTREZGENE
CHM1_1690,733,911 - 91,104,124 (-)NCBI
T2T-CHM13v2.0691,138,217 - 91,508,429 (-)NCBI
Sequence:
RefSeq Acc Id: NM_021813   ⟹   NP_068585
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38689,926,528 - 90,296,843 (-)NCBI
GRCh37690,636,247 - 91,006,627 (-)ENTREZGENE
GRCh37690,636,247 - 91,006,627 (-)NCBI
Build 36690,692,969 - 91,063,182 (-)NCBI Archive
HuRef687,855,580 - 88,225,476 (-)ENTREZGENE
CHM1_1690,733,911 - 91,104,124 (-)NCBI
T2T-CHM13v2.0691,138,217 - 91,508,429 (-)NCBI
Sequence:
1 to 30 of 33 rows
Protein RefSeqs NP_001164265 (Get FASTA)   NCBI Sequence Viewer  
  NP_068585 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAK48898 (Get FASTA)   NCBI Sequence Viewer  
  BAD92126 (Get FASTA)   NCBI Sequence Viewer  
  CAC28130 (Get FASTA)   NCBI Sequence Viewer  
  CBX47436 (Get FASTA)   NCBI Sequence Viewer  
  CCD17752 (Get FASTA)   NCBI Sequence Viewer  
  CCD17753 (Get FASTA)   NCBI Sequence Viewer  
  CCD17754 (Get FASTA)   NCBI Sequence Viewer  
  CCD17755 (Get FASTA)   NCBI Sequence Viewer  
  CCD17756 (Get FASTA)   NCBI Sequence Viewer  
  CCD17757 (Get FASTA)   NCBI Sequence Viewer  
  CCD17758 (Get FASTA)   NCBI Sequence Viewer  
  CCD17759 (Get FASTA)   NCBI Sequence Viewer  
  CCD17760 (Get FASTA)   NCBI Sequence Viewer  
  CCD17761 (Get FASTA)   NCBI Sequence Viewer  
  CCD17762 (Get FASTA)   NCBI Sequence Viewer  
  CCD17763 (Get FASTA)   NCBI Sequence Viewer  
  CCD17764 (Get FASTA)   NCBI Sequence Viewer  
  CCD17765 (Get FASTA)   NCBI Sequence Viewer  
  EAW48530 (Get FASTA)   NCBI Sequence Viewer  
  EAW48531 (Get FASTA)   NCBI Sequence Viewer  
  EAW48532 (Get FASTA)   NCBI Sequence Viewer  
  EAW48533 (Get FASTA)   NCBI Sequence Viewer  
  EAW48534 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000257749
  ENSP00000257749.4
  ENSP00000345642.3
  ENSP00000384145
  ENSP00000384145.3
1 to 30 of 33 rows
RefSeq Acc Id: NP_001164265   ⟸   NM_001170794
- UniProtKB: Q5T793 (UniProtKB/Swiss-Prot),   Q59H70 (UniProtKB/Swiss-Prot),   E1P518 (UniProtKB/Swiss-Prot),   Q9NTS5 (UniProtKB/Swiss-Prot),   Q9BYV9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_068585   ⟸   NM_021813
- UniProtKB: Q5T793 (UniProtKB/Swiss-Prot),   Q59H70 (UniProtKB/Swiss-Prot),   E1P518 (UniProtKB/Swiss-Prot),   Q9NTS5 (UniProtKB/Swiss-Prot),   Q9BYV9 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000397668   ⟸   ENST00000453877
Ensembl Acc Id: ENSP00000257749   ⟸   ENST00000257749
Ensembl Acc Id: ENSP00000437473   ⟸   ENST00000537989
BTB   bZIP

Name Modeler Protein Id AA Range Protein Structure
AF-Q9BYV9-F1-model_v2 AlphaFold Q9BYV9 1-841 view protein structure

RGD ID:7208713
Promoter ID:EPDNEW_H10102
Type:initiation region
Name:BACH2_2
Description:BTB domain and CNC homolog 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H10103  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38690,080,927 - 90,080,987EPDNEW
RGD ID:7208715
Promoter ID:EPDNEW_H10103
Type:initiation region
Name:BACH2_1
Description:BTB domain and CNC homolog 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H10102  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38690,296,843 - 90,296,903EPDNEW
RGD ID:6803778
Promoter ID:HG_KWN:54366
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell
Transcripts:OTTHUMT00000041528
Position:
Human AssemblyChrPosition (strand)Source
Build 36690,774,881 - 90,775,381 (-)MPROMDB
RGD ID:6804016
Promoter ID:HG_KWN:54367
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_2Hour
Transcripts:ENST00000406998
Position:
Human AssemblyChrPosition (strand)Source
Build 36690,847,291 - 90,847,791 (-)MPROMDB
RGD ID:6803777
Promoter ID:HG_KWN:54368
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   K562
Transcripts:OTTHUMT00000041525
Position:
Human AssemblyChrPosition (strand)Source
Build 36690,984,909 - 90,985,409 (-)MPROMDB
RGD ID:6804017
Promoter ID:HG_KWN:54369
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   K562
Transcripts:ENST00000343122,   NM_001170794,   NM_021813,   OTTHUMT00000041520,   OTTHUMT00000041521,   OTTHUMT00000041523,   OTTHUMT00000041526,   OTTHUMT00000041527,   UC003PNV.1,   UC010KCH.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36691,063,016 - 91,063,516 (-)MPROMDB


1 to 40 of 60 rows
Database
Acc Id
Source(s)
COSMIC BACH2 COSMIC
Ensembl Genes ENSG00000112182 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000257749 ENTREZGENE
  ENST00000257749.9 UniProtKB/Swiss-Prot
  ENST00000343122.7 UniProtKB/Swiss-Prot
  ENST00000406998 ENTREZGENE
  ENST00000406998.7 UniProtKB/Swiss-Prot
  ENST00000453877.6 UniProtKB/Swiss-Prot
  ENST00000695952.1 UniProtKB/Swiss-Prot
Gene3D-CATH Potassium Channel Kv1.1, Chain A UniProtKB/Swiss-Prot
  Transcription factor, Skn-1-like, DNA-binding domain UniProtKB/Swiss-Prot
GTEx ENSG00000112182 GTEx
HGNC ID HGNC:14078 ENTREZGENE
Human Proteome Map BACH2 Human Proteome Map
InterPro BTB/POZ_dom UniProtKB/Swiss-Prot
  bZIP UniProtKB/Swiss-Prot
  bZIP_BACH UniProtKB/Swiss-Prot
  bZIP_Maf UniProtKB/Swiss-Prot
  bZIP_sf UniProtKB/Swiss-Prot
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot
  TF_DNA-bd_sf UniProtKB/Swiss-Prot
  ZnFinger_BTB_dom_contain UniProtKB/Swiss-Prot
KEGG Report hsa:60468 UniProtKB/Swiss-Prot
NCBI Gene 60468 ENTREZGENE
OMIM 605394 OMIM
PANTHER AGAP004733-PA UniProtKB/Swiss-Prot
  TRANSCRIPTION REGULATOR PROTEIN BACH2 UniProtKB/Swiss-Prot
Pfam BTB UniProtKB/Swiss-Prot
  bZIP_Maf UniProtKB/Swiss-Prot
PharmGKB PA25235 PharmGKB
PROSITE BTB UniProtKB/Swiss-Prot
  BZIP UniProtKB/Swiss-Prot
  BZIP_BASIC UniProtKB/Swiss-Prot
SMART BRLZ UniProtKB/Swiss-Prot
  BTB UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47454 UniProtKB/Swiss-Prot
  SSF54695 UniProtKB/Swiss-Prot
  SSF57959 UniProtKB/Swiss-Prot
UniProt BACH2_HUMAN UniProtKB/Swiss-Prot
  E1P518 ENTREZGENE
1 to 40 of 60 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-02 BACH2  BTB domain and CNC homolog 2    BTB and CNC homology 1, basic leucine zipper transcription factor 2  Symbol and/or name change 5135510 APPROVED